All Neuroconductor Packages

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Package Stable Version Title Maintainer GitHub Last Updated
aal0.1.1Automated Anatomical Labeling ('AAL') AtlasJohn Muschelli muschellij2/aal 2021-03-31
afnir0.4.6Wrapper Functions for 'AFNI' (Analysis of Functional 'NeuroImages')John Muschelli muschellij2/afnir 2021-03-31
alvin0.3.0'ALVIN' Ventricle AtlasJohn Muschelli muschellij2/alvin 2021-03-31
aws2.4.1Adaptive Weights SmoothingJoerg Polzehl WIAS-BERLIN/aws 2021-03-31
bftools0.2.3.3BioFormats ToolsJohn Muschelli muschellij2/bftools 2021-03-31
brainKCCA0.1.0Region-Level Connectivity Network Construction via Kernel Canonical Correlation AnalysisJian Kang kangjian2016/brainKCCA 2021-03-31
brainR1.6.0Helper Functions to 'misc3d' and 'rgl' Packages for Brain ImagingJohn Muschelli muschellij2/brainR 2021-03-31
cap1.0Covariate Assisted Principal (CAP) Regression for Covariance Matrix OutcomesYi Zhao zhaoyi1026/cap 2021-03-31
cfma1.0.1Causal Functional Mediation AnalysisYi Zhao zhaoyi1026/cfma 2021-03-31
cifti0.4.7Toolbox for Connectivity Informatics Technology Initiative ('CIFTI') FilesJohn Muschelli muschellij2/cifti 2021-03-31
ciftiTools0.6.1Tools for Reading, Writing, Viewing and Manipulating CIFTI FilesAmanda Mejia mandymejia/ciftiTools 2021-10-01
dcemriS40.57.2A Package for Image Analysis of DCE-MRI (S4 Implementation)Brandon Whitcher bjw34032/dcemriS4 2021-03-31
dcm2niir0.6.9.1Conversion of 'DICOM' to 'NIfTI' Imaging Files Through RJohn Muschelli muschellij2/dcm2niir.git 2021-03-31
dcmsort0.3.0Sort DICOM ImagesJohn Muschelli muschellij2/dcmsort 2021-03-31
dcmtk0.6.8.1Wrapper for 'DICOM' Toolkit ('DCMTK')John Muschelli muschellij2/dcmtk 2021-03-31
DensParcorr1.0Dens-Based Method for Partial Correlation Estimation in Large Scale Brain NetworksYikai Wang johnzonwyk/DensParcorr 2021-03-31
divest0.9.0Get Images Out of DICOM Format QuicklyJon Clayden jonclayden/divest 2021-03-31
dti1.5.2Analysis of Diffusion Weighted Imaging (DWI) DataKarsten Tabelow WIAS-BERLIN/dti 2021-03-31
EEGSpectralAnalysis0.0.0.9001Compute and plot various spectral EEG analysesAdi Gherman adigherman/EEGSpectralAnalysis 2021-03-31
eegUtils0.6.1Utilities for Electroencephalographic (EEG) AnalysisMatt Craddock craddm/eegUtils 2021-03-31
EveTemplate1.0.0JHU-MNI-ss (Eve) templateJean-Philippe Fortin Jfortin1/EveTemplate 2021-03-31
fmri1.9.3Analysis of fMRI ExperimentsKarsten Tabelow WIAS-BERLIN/fmri.git 2021-03-31
fmriqa0.4.0Functional MRI Quality Assurance RoutinesMartin Wilson martin3141/fmriqa 2021-03-31
fMRIscrub0.8.5Scrubbing and Other Data Cleaning Routines for fMRIAmanda Mejia mandymejia/fMRIscrub 2021-10-13
freesurfer1.6.7.1Wrapper Functions for 'Freesurfer'John Muschelli muschellij2/freesurfer 2021-03-31
freesurferformats0.1.13Read and Write 'FreeSurfer' Neuroimaging File FormatsTim Sch dfsp-spirit/freesurferformats 2021-03-31
fslr2.25.0Wrapper Functions for 'FSL' ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB')John Muschelli muschellij2/fslr 2021-03-31
gganatogram1.1.1Create Anatograms of Various SpeciesJesper Maag jespermaag/gganatogram.git 2021-03-31
ggneuro0.5.0Plotting Functions for Neuroimaging Data in 'ggplot2'John Muschelli muschellij2/ggneuro.git 2021-03-31
ggseg1.5.5Plotting Tool for Brain AtlasesAthanasia Mo Mowinckel LCBC-UiO/ggseg 2021-03-31
gifti0.7.6Reads in 'Neuroimaging' 'GIFTI' Files with Geometry InformationJohn Muschelli muschellij2/gifti 2021-03-31
I2C20.2.4Image Intraclass Correlation CoefficientHaochang Shou muschellij2/I2C2.git 2021-03-31
ITKR0.5.3.3.0ITK in RBrian B. Avants stnava/ITKR 2021-03-31
itksnapr2.1Package of ITK-SNAPJohn Muschelli muschellij2/itksnapr 2021-03-31
kirby21.asl1.7.0Example ASL Data from the Multi-Modal MRI Reproducibility ResourceJohn Muschelli muschellij2/kirby21.asl.git 2021-03-31
kirby21.base1.7.3Example Data from the Multi-Modal MRI 'Reproducibility' ResourceJohn Muschelli muschellij2/kirby21.base 2021-03-31
kirby21.det21.7.0Example DET2 Structural Data from the Multi-Modal MRI Reproducibility ResourceJohn Muschelli muschellij2/kirby21.det2 2021-03-31
kirby21.dti1.7.0Example DTI Data from the Multi-Modal MRI Reproducibility ResourceJohn Muschelli muschellij2/kirby21.dti.git 2021-03-31
kirby21.flair1.7.0Example FLAIR Structural Data from the Multi-Modal MRI Reproducibility ResourceJohn Muschelli muschellij2/kirby21.flair 2021-03-31
kirby21.fmri1.7.0Example Functional Imaging Data from the Multi-Modal MRI 'Reproducibility' ResourceJohn Muschelli muschellij2/kirby21.fmri 2021-03-31
kirby21.mricloud1.0.0A dataset containing correlation data for 20 subjects from Kennedy KriegerAdi Gherman adigherman/kirby21.mricloud.git 2021-03-31
kirby21.mt1.7.0MT Structural Data from the Multi-Modal MRI Reproducibility ResourceJohn Muschelli muschellij2/kirby21.mt.git 2021-03-31
kirby21.smri1.5Example Structural Data from the Multi-Modal MRI Reproducibility ResourceJohn Muschelli muschellij2/kirby21.smri.git 2021-03-31
kirby21.t11.7.3.2Example T1 Structural Data from the Multi-Modal MRI 'Reproducibility' ResourceJohn Muschelli muschellij2/kirby21.t1 2021-03-31
kirby21.t21.7.0Example T2 Structural Data from the Multi-Modal MRI Reproducibility ResourceJohn Muschelli muschellij2/kirby21.t2 2021-03-31
kirby21.vaso1.7.0Example VASO Data from the Multi-Modal MRI Reproducibility ResourceJohn Muschelli muschellij2/kirby21.vaso.git 2021-03-31
malf.templates1.2.0Template Images for Multi-Atlas Label Fusion ('MALF')John Muschelli muschellij2/malf.templates 2021-03-31
mmand1.6.0Mathematical Morphology in Any Number of DimensionsJon Clayden jonclayden/mmand 2021-03-31
mni0.2.0Human 'MNI' (Montreal Neurological Institute) Adult TemplatesJohn Muschelli muschellij2/mni 2021-03-31
MNITemplate1.0.0MNI MRI TemplateJean-Philippe Fortin Jfortin1/MNITemplate 2021-03-31
MriCloudR0.9.3R wrapper for MriCloud APIBrian Caffo bcaffo/MriCloudR.git 2021-03-31
MRIcloudT1volumetrics0.3.1MRIcloud Analysis of T1 Volumetric OutputBrian Caffo bcaffo/MRIcloudT1volumetrics.git 2021-03-31
msmri0.3.1Open Multiple Sclerosis Magnetic Resonance Imaging DataJohn Muschelli muschellij2/msmri.git 2021-03-31
neurobase1.30.1'Neuroconductor' Base Package with Helper Functions for 'nifti' ObjectsJohn Muschelli muschellij2/neurobase 2021-03-31
neurocInstall0.12.1'Neuroconductor' InstallerJohn Muschelli muschellij2/neurocInstall.git 2021-03-31
neuroCombat1.0.13Harmonization of multi-site imaging data with ComBatJean-Philippe Fortin Jfortin1/neuroCombat_Rpackage 2021-06-03
neuroCombatData0.99.0Example dataset for neuroCombatJean-Philippe Fortin Jfortin1/neuroCombatData 2021-06-03
neurocStats0.1.3Package that Retrieves Neuroconductor StatsAdi Gherman adigherman/neurocStats 2021-03-31
neurohcp0.9.0Human 'Connectome' Project InterfaceJohn Muschelli muschellij2/neurohcp.git 2021-03-31
nitrcbot1.2Download Image Files from the 'NeuroImaging Tools and Resources Collaboratory'Adi Gherman adigherman/nitrcbot.git 2021-03-31
nsrr0.1.5Interface to National Sleep Research ResourceJohn Muschelli muschellij2/nsrr 2021-03-31
oasis3.0.1Multiple Sclerosis Lesion Segmentation using Magnetic Resonance Imaging (MRI)Elizabeth M. Sweeney emsweene/oasis 2021-03-31
oro.asl0.1.1Rigorous - Aterial Spin LabellingBrandon Whitcher bjw34032/oro.asl 2021-03-31
oro.dicom0.5.2.2Rigorous - DICOM Input / OutputBrandon Whitcher bjw34032/oro.dicom 2021-03-31
oro.nifti0.10.3Rigorous - 'NIfTI' + 'ANALYZE' + 'AFNI' : Input / OutputBrandon Whitcher bjw34032/oro.nifti 2021-03-31
oro.pet0.2.5Rigorous - Positron Emission TomographyBrandon Whitcher bjw34032/oro.pet 2021-03-31
pain210.1.121 Pain StudiesSimon Vandekar simonvandekar/pain21 2021-03-31
papayar1.0View Medical Research Images using the Papaya JavaScript LibraryJohn Muschelli muschellij2/papayar 2021-03-31
papayaWidget0.7.1Embed an 'Papaya' Image ViewerJohn Muschelli muschellij2/papayaWidget 2021-03-31
pbj0.1.6Parametric Bootstrap Joint Testing Procedures for NeuroimagingSimon Vandekar simonvandekar/pbj 2021-03-31
penn1150.1.1Template MRI Scan from 115 University of Pennsylvania PatientsJohn Muschelli muschellij2/penn115 2021-03-31
qMRI1.2Methods for Quantitative Magnetic Resonance Imaging ('qMRI')Karsten Tabelow WIAS-BERLIN/qMRI 2021-03-31
RAVEL1.2.2Removal of Artificial Voxel Effect by Linear RegressionJean-Philippe Fortin Jfortin1/RAVEL 2021-03-31
RAVELData0.99.1Example dataset of input data for RAVELJean-Philippe Fortin Jfortin1/RAVELData 2021-03-31
RIA1.4.2Radiomics Image Analysis Toolbox for Medial ImagesMarton Kolossvary cran/RIA 2021-03-31
RNifti1.3.1Fast R and C++ Access to NIfTI ImagesJon Clayden jonclayden/RNifti.git 2021-03-31
RNiftyReg2.7.0Image Registration Using the 'NiftyReg' LibraryJon Clayden jonclayden/RNiftyReg 2021-03-31
ROpenCVLite0.3.410Install OpenCV Within RSimon Garnier swarm-lab/ROpenCVLite.git 2021-03-31
spant1.12.0MR Spectroscopy Analysis ToolsMartin Wilson martin3141/spant 2021-03-31
spm12r2.8.1Wrapper Functions for 'SPM' (Statistical Parametric Mapping) Version 12 from the 'Wellcome' Trust Centre for 'Neuroimaging'John Muschelli muschellij2/spm12r 2021-03-31
sri240.1.2SRI24 MRI Atlas for Normal Adult Brain AnatomyJohn Muschelli muschellij2/sri24 2021-03-31
stapler0.7.2Simultaneous Truth and Performance Level EstimationJohn Muschelli muschellij2/stapler 2021-03-31
sublime1.3Automatic Lesion Incidence Estimation and Detection using Multi-Modality Longitudinal Magnetic Resonance ImagesElizabeth M. Sweeney emsweene/SuBLIME_package 2021-03-31
voxel1.3.5Mass-Univariate Voxelwise Analysis of Medical Imaging DataAngel Garcia de la Garza angelgar/voxel 2021-03-31
waveslim1.8.0Basic Wavelet Routines for One-, Two-, and Three-Dimensional Signal ProcessingBrandon Whitcher bjw34032/waveslim.git 2021-03-31
WhiteStripe2.3.2White Matter Normalization for Magnetic Resonance Images using WhiteStripeJohn Muschelli muschellij2/WhiteStripe 2021-03-31