| afnir | 0.4.5 | Wrapper Functions for 'AFNI' (Analysis of Functional 'NeuroImages')
| John Muschelli | muschellij2/afnir | 2018-04-26 |
| ANTsR | 0.6.1 | ANTs in R: Quantification Tools for Biomedical Images
| Brian B. Avants | stnava/ANTsR | 2017-10-05 |
| ANTsRCore | 0.5.0 | Core Software Infrastructure for 'ANTsR'
| Brian B. Avants | stnava/ANTsRCore.git | 2018-04-20 |
| brainKCCA | 0.0.0.9001 | Region-level Connectivity Network Construction via Kernel
Canonical Correlation Analysis
| Jian Kang | xuboyue/brainKCCA_v4 | 2018-03-23 |
| brainR | 1.5.2 | Helper Functions to 'misc3d' and 'rgl' Packages for Brain
Imaging
| John Muschelli | muschellij2/brainR | 2017-11-29 |
| cfma | 1.0 | Causal Functional Mediation Analysis
| Yi Zhao | zhaoyi1026/cfma | 2018-05-25 |
| cifti | 0.4.5 | Toolbox for Connectivity Informatics Technology Initiative
('CIFTI') Files
| John Muschelli | muschellij2/cifti | 2018-04-18 |
| dcemriS4 | 0.57.1 | A Package for Image Analysis of DCE-MRI (S4 Implementation)
| Brandon Whitcher | bjw34032/dcemriS4 | 2017-10-08 |
| dcm2niir | 0.6.1 | Conversion of 'DICOM' to 'NIfTI' Imaging Files Through R
| John Muschelli | muschellij2/dcm2niir | 2017-12-04 |
| dcmsort | 0.2.4 | Sort DICOM Images
| John Muschelli | muschellij2/dcmsort | 2018-04-21 |
| dcmtk | 0.6.1.9000 | Wrapper for 'DICOM' Toolkit ('DCMTK')
| John Muschelli | muschellij2/dcmtk | 2018-06-20 |
| DensParcorr | 1.0 | Dens-Based Method for Partial Correlation Estimation in Large Scale Brain Networks
| Yikai Wang | johnzonwyk/DensParcorr | 2017-10-09 |
| divest | 0.4.1 | Get Images Out of DICOM Format Quickly
| Jon Clayden | jonclayden/divest | 2017-10-06 |
| dti | 1.2.6.2 | Analysis of Diffusion Weighted Imaging (DWI) Data
| Karsten Tabelow | WIAS-BERLIN/dti | 2017-10-20 |
| EveTemplate | 0.99.14 | JHU-MNI-ss (Eve) template
| Jean-Philippe Fortin | Jfortin1/EveTemplate | 2017-10-06 |
| extrantsr | 3.7.5.9002 | Extra Functions to Build on the 'ANTsR' Package
| John Muschelli | muschellij2/extrantsr.git | 2018-05-02 |
| fmri | 1.7.4 | Analysis of fMRI Experiments
| Karsten Tabelow | WIAS-BERLIN/fmri.git | 2017-10-20 |
| fmriqa | 0.2.0 | Functional MRI Quality Assurance Routines
| Martin Wilson | martin3141/fmriqa | 2017-12-20 |
| freesurfer | 1.6.2.9000 | Wrapper Functions for 'Freesurfer'
| John Muschelli | muschellij2/freesurfer | 2018-05-24 |
| fslr | 2.18.2 | Wrapper Functions for 'FSL' ('FMRIB' Software Library) from Functional MRI
of the Brain ('FMRIB')
| John Muschelli | muschellij2/fslr | 2018-04-18 |
| ggBrain | 0.1 | ggplot Brain Images
| Aaron Fisher | aaronjfisher/ggBrain | 2017-10-09 |
| ggneuro | 0.5.0 | Plotting Functions for Neuroimaging Data in 'ggplot2'
| John Muschelli | muschellij2/ggneuro.git | 2018-05-09 |
| gifti | 0.7.5 | Reads in 'Neuroimaging' 'GIFTI' Files with Geometry Information
| John Muschelli | muschellij2/gifti.git | 2018-04-21 |
| I2C2 | 0.2.2 | Image Intraclass Correlation Coefficient
| Haochang Shou | muschellij2/I2C2.git | 2017-10-06 |
| ichseg | 0.11.0 | Intracerebral Hemorrhage Segmentation of X-Ray Computed Tomography (CT)
Images
| John Muschelli | muschellij2/ichseg.git | 2018-04-21 |
| ITKR | 0.4.12.4 | ITK in R
| Brian B. Avants | stnava/ITKR | 2017-10-04 |
| itksnapr | 2.1 | Package of ITK-SNAP
| John Muschelli | muschellij2/itksnapr | 2017-10-08 |
| kirby21.asl | 1.5.1 | Example ASL Data from the Multi-Modal MRI
Reproducibility Resource
| John Muschelli | muschellij2/kirby21.asl.git | 2017-10-05 |
| kirby21.base | 1.6.0 | Example Data from the Multi-Modal MRI 'Reproducibility' Resource
| John Muschelli | muschellij2/kirby21.base | 2018-04-18 |
| kirby21.det2 | 1.5.1 | Example DET2 Structural Data from the Multi-Modal MRI
Reproducibility Resource
| John Muschelli | muschellij2/kirby21.det2 | 2017-10-05 |
| kirby21.dti | 1.5.1 | Example DTI Data from the Multi-Modal MRI
Reproducibility Resource
| John Muschelli | muschellij2/kirby21.dti | 2017-10-05 |
| kirby21.flair | 1.5.1 | Example FLAIR Structural Data from the Multi-Modal MRI
Reproducibility Resource
| John Muschelli | muschellij2/kirby21.flair | 2017-10-05 |
| kirby21.fmri | 1.6.0 | Example Functional Imaging Data from the Multi-Modal
MRI 'Reproducibility' Resource
| John Muschelli | muschellij2/kirby21.fmri | 2018-04-18 |
| kirby21.mricloud | 0.0.0.9000 | A dataset containing correlation data for 20 subjects from
Kennedy Krieger
| Adi Gherman | adigherman/kirby21.mricloud | 2018-08-13 |
| kirby21.mt | 1.5.1 | MT Structural Data from the Multi-Modal MRI
Reproducibility Resource
| John Muschelli | muschellij2/kirby21.mt | 2017-10-05 |
| kirby21.smri | 1.5 | Example Structural Data from the Multi-Modal MRI Reproducibility
Resource
| John Muschelli | muschellij2/kirby21.smri | 2017-10-05 |
| kirby21.t1 | 1.6.0 | Example T1 Structural Data from the Multi-Modal MRI
'Reproducibility' Resource
| John Muschelli | muschellij2/kirby21.t1 | 2018-04-18 |
| kirby21.t2 | 1.5.1 | Example T2 Structural Data from the Multi-Modal MRI
Reproducibility Resource
| John Muschelli | muschellij2/kirby21.t2 | 2017-10-05 |
| kirby21.vaso | 1.5.1 | Example VASO Data from the Multi-Modal MRI
Reproducibility Resource
| John Muschelli | muschellij2/kirby21.vaso | 2017-10-05 |
| lungct | 0.6.0.1 | Processing of Lung CT Scans
| John Muschelli | muschellij2/lungct | 2017-10-09 |
| malf.templates | 0.3 | Template Images for Multi-Atlas Label Fusion ('MALF')
| John Muschelli | muschellij2/malf.templates | 2017-10-05 |
| mimosa | 0.5.3 | 'MIMoSA': A Method for Inter-Modal Segmentation Analysis
| Alessandra Valcarcel | avalcarcel9/mimosa | 2017-12-12 |
| MNITemplate | 0.99.4 | MNI152 template
| Jean-Philippe Fortin | Jfortin1/MNITemplate | 2017-10-06 |
| MriCloudR | 0.9.1 | R wrapper for MriCloud API
| Brian Caffo | bcaffo/MriCloudR | 2018-05-23 |
| MRIcloudT1volumetrics | 0.1 | MRIcloud Analysis of T1 Volumetric Output
| Brian Caffo | bcaffo/MRIcloudT1volumetrics | 2017-10-06 |
| msmri | 0.3.1 | Open Multiple Sclerosis Magnetic Resonance Imaging Data
| John Muschelli | muschellij2/msmri | 2018-06-12 |
| neurobase | 1.26.3 | 'Neuroconductor' Base Package with Helper Functions for 'nifti' Objects
| John Muschelli | muschellij2/neurobase | 2018-05-02 |
| neurocInstall | 0.10.3 | 'Neuroconductor' Installer
| John Muschelli | muschellij2/neurocInstall | 2018-04-18 |
| neurohcp | 0.8.0 | Human 'Connectome' Project Interface
| John Muschelli | muschellij2/neurohcp | 2018-05-09 |
| neurovault | 0.5.5 | 'Neurovault' Database API Access
| John Muschelli | muschellij2/neurovault | 2017-12-01 |
| nitrcbot | 0.0.0.9001 | Download Image Files from the 'NeuroImaging Tools and Resources
Collaboratory'
| Adi Gherman | adigherman/nitrcbot.git | 2018-03-07 |
| oasis | 2.5.2 | Multiple Sclerosis Lesion Segmentation using Magnetic Resonance
Imaging (MRI)
| Elizabeth M. Sweeney | emsweene/oasis | 2017-10-09 |
| oro.asl | 0.1.1 | Rigorous - Aterial Spin Labelling
| Brandon Whitcher | bjw34032/oro.asl | 2017-10-08 |
| oro.dicom | 0.5.2 | Rigorous - DICOM Input / Output
| Brandon Whitcher | bjw34032/oro.dicom | 2017-10-06 |
| oro.nifti | 0.9.6 | Rigorous - 'NIfTI' + 'ANALYZE' + 'AFNI' : Input / Output
| Brandon Whitcher | bjw34032/oro.nifti | 2018-04-26 |
| oro.pet | 0.2.5 | Rigorous - Positron Emission Tomography
| Brandon Whitcher | bjw34032/oro.pet | 2017-10-08 |
| papayar | 1.0 | View Medical Research Images using the Papaya JavaScript Library
| John Muschelli | muschellij2/papayar | 2017-10-08 |
| papayaWidget | 0.5.4 | Rmarkdown papaya embedding
| John Muschelli | muschellij2/papayaWidget | 2018-03-08 |
| RAVEL | 1.1.1 | Removal of Artificial Voxel Effect by Linear Regression
| Jean-Philippe Fortin | Jfortin1/RAVEL | 2017-10-12 |
| rcamino | 0.6.2 | Port of the Camino Software
| John Muschelli | muschellij2/rcamino | 2018-04-21 |
| RNifti | 0.7.1 | Fast R and C++ Access to NIfTI Images
| Jon Clayden | jonclayden/RNifti.git | 2017-10-06 |
| RNiftyReg | 2.6.0 | Image Registration Using the 'NiftyReg' Library
| Jon Clayden | jonclayden/RNiftyReg | 2017-10-06 |
| robex | 1.2.4 | Robust Brain Extraction ('ROBEX')
| John Muschelli | muschellij2/robex | 2018-05-24 |
| ROpenCVLite | 0.1.34 | Install OpenCV Within R
| Simon Garnier | swarm-lab/ROpenCVLite | 2018-02-07 |
| Rvision | 0.2.1 | Basic Computer Vision Library
| Simon Garnier | swarm-lab/Rvision | 2018-01-18 |
| smri.process | 0.4.2 | Processing of Structural Magnetic Resonance Imaging
| John Muschelli | muschellij2/smri.process | 2017-11-08 |
| spant | 0.6.0.9000 | MR Spectroscopy Analysis Tools
| Martin Wilson | martin3141/spant | 2017-10-20 |
| spm12r | 2.7.4 | Wrapper Functions for 'SPM' (Statistical Parametric Mapping)
Version 12 from the 'Wellcome' Trust Centre for 'Neuroimaging'
| John Muschelli | muschellij2/spm12r | 2018-05-24 |
| sri24 | 0.1.1 | SRI24 MRI Atlas for Normal Adult Brain Anatomy
| John Muschelli | muschellij2/sri24 | 2018-02-19 |
| stapler | 0.6.5 | Simultaneous Truth and Performance Level Estimation
| John Muschelli | muschellij2/stapler | 2018-01-04 |
| sublime | 1.3 | Automatic Lesion Incidence Estimation and Detection using
Multi-Modality Longitudinal Magnetic Resonance Images
| Elizabeth M. Sweeney | emsweene/SuBLIME_package | 2017-10-12 |
| voxel | 1.3.4 | Mass-Univariate Voxelwise Analysis of Medical Imaging Data
| Angel Garcia de la Garza | angelgar/voxel | 2018-04-29 |
| waveslim | 1.7.8 | Basic Wavelet Routines for One-, Two-, and Three-Dimensional Signal
Processing
| Brandon Whitcher | bjw34032/waveslim | 2017-10-25 |
| WhiteStripe | 2.3.1 | White Matter Normalization for Magnetic Resonance Images using
WhiteStripe
| John Muschelli | muschellij2/WhiteStripe | 2018-05-24 |
