Package fmri details

Analysis of fMRI Experiments

Contains R-functions to perform an fMRI analysis as described in Tabelow et al. (2006) , Polzehl et al. (2010) , Tabelow and Polzehl (2011) .

Maintainer: Karsten Tabelow < tabelow at wias-berlin.de >

 
From within R, enter citation(fmri)


To cite fmri in publications use:

Karsten Tabelow, Joerg Polzehl (2011). Statistical Parametric Maps
for Functional MRI Experiments in R: The Package fmri. Journal of
Statistical Software, 44(11), 1-21. URL
http://www.jstatsoft.org/v44/i11/.

For the underlying structural adaptive smoothing method please cite:

Karsten Tabelow, Joerg Polzehl, Henning U. Voss, Vladimir Spokoiny
(2006). Analyzing fMRI experiments with structural adaptive smoothing
procedures. NeuroImage, 33(1), 55-62.
doi:10.1016/j.neuroimage.2006.06.029

For the underlying structural adaptive segmentation method please cite:

Karsten Tabelow, Joerg Polzehl, Henning U. Voss, Vladimir Spokoiny
(2006). Structural adaptive segmentation for statistical parametric
mapping. NeuroImage, 52(2), 515-523.
doi:10.1016/j.neuroimage.2010.04.241

To see these entries in BibTeX format, use 'print(,
bibtex=TRUE)', 'toBibtex(.)', or set
'options(citation.bibtex.max=999)'.

 

If you have any problems with this package you can open a new issue or check the already existing ones here.

 
 
To install this package, start R and enter:

source("https://neuroconductor.org/neurocLite.R")

# use release_versions() to find previous releases
neuro_install('fmri', release_repo= 'https://neuroconductor.org/releases/2018/feb')

# Default Install
neuro_install('fmri')

# From the Binary Repo in NeuroC
neuro_install('fmri', release = "stable", release_repo = binary_release_repo(release = "stable"))
neuro_install('fmri', release = "current", release_repo = binary_release_repo(release = "current"))

# from GitHub
neuro_install('fmri', release = "stable", release_repo = "github")
neuro_install('fmri', release = "current", release_repo = "github")

More detailed installation instructions can be found here.

 

Initially submitted on September 27 2018 12:52PM
Last updated on September 27 2018 12:52PM
Package type standard
Source GitHub https://github.com/WIAS-BERLIN/fmri.git GitHub
Neuroconductor GitHub https://github.com/neuroconductor/fmri GitHub
DependsR (3.2.0), awsMethods(>=1.0
Importsparallel, metafor, methods, aws
Suggeststcltk, tkrplot, fastICA, adimpro, oro.nifti