Package dti details
Analysis of Diffusion Weighted Imaging (DWI) Data
Diffusion Weighted Imaging (DWI) is a Magnetic Resonance Imaging modality, that measures diffusion of water in tissues like the human brain. The package contains R-functions to process diffusion-weighted data. The functionality includes diffusion tensor imaging (DTI), diffusion kurtosis imaging (DKI), modeling for high angular resolution diffusion weighted imaging (HARDI) using Q-ball-reconstruction and tensor mixture models, several methods for structural adaptive smoothing including POAS and msPOAS, and a streamline fiber tracking for tensor and tensor mixture models. The package provides functionality to manipulate and visualize results in 2D and 3D.
Maintainer: Karsten Tabelow < karsten.tabelow at wias-berlin.de >
From within R, enter citation('dti')
If you have any problems with this package you can open a new issue or check the already existing ones here.
To install this package, start R and enter:
source("https://neuroconductor.org/neurocLite.R")
# Default Install
neuro_install('dti')
# from GitHub
neuro_install('dti', release = "stable", release_repo = "github")
neuro_install('dti', release = "current", release_repo = "github")
More detailed installation instructions can be found here.
Initially submitted on | October 1 2018 4:57PM |
Last updated on | March 31 2021 10:00AM |
Package type | standard |
Source GitHub | https://github.com/WIAS-BERLIN/dti GitHub |
Neuroconductor GitHub | https://github.com/neuroconductor/dti GitHub |
System requirements | gsl |
Depends | R (3.5.0), awsMethods(>=1.1-1) |
Imports | methods, parallel, adimpro (0.9), aws (2.4.1), rgl, oro.nifti (0.3.9), oro.dicom, gsl, quadprog |
Suggests | covr |