Package neurobase details

'Neuroconductor' Base Package with Helper Functions for 'nifti' Objects

Base package for 'Neuroconductor', which includes many helper functions that interact with objects of class 'nifti', implemented by package 'oro.nifti', for reading/writing and also other manipulation functions.

Maintainer: John Muschelli < muschellij2 at >


From within R, enter citation('neurobase')

To cite package 'neurobase' in publications use:

John Muschelli (NA). neurobase: 'Neuroconductor' Base Package with
Helper Functions for 'nifti' Objects. R package version 1.30.1.

A BibTeX entry for LaTeX users is

title = {neurobase: 'Neuroconductor' Base Package with Helper Functions for 'nifti' Objects},
author = {John Muschelli},
note = {R package version 1.30.1},


If you have any problems with this package you can open a new issue or check the already existing ones here.

To install this package, start R and enter:


# Default Install

# from GitHub
neuro_install('neurobase', release = "stable", release_repo = "github")
neuro_install('neurobase', release = "current", release_repo = "github")

More detailed installation instructions can be found here.


Initially submitted on September 30 2018 12:43PM
Last updated on May 29 2020 3:32PM
Package type standard
Source GitHub GitHub
Neuroconductor GitHub GitHub
Dependsoro.nifti (0.10.3), R (3.2.0)
Importsmethods, abind, matrixStats, R.utils, graphics, grDevices, stats, RNifti
Suggeststestthat, ggplot2, knitr, rmarkdown, dplyr, reshape2, httr, covr, brainR
Reverse Dependsfslr
Reverse Importspapayar, itksnapr, ggneuro (1.16), oasis, penn115, afnir (1.27.0), aal, spm12r, dcmsort, medals (1.26.1), rcamino, smri.process (1.27.3), papayaWidget (1.27), rtapas (1.13.2), flexconn (1.27.7), mimosa (1.27.11), alvin, freesurfer, robex, RAVEL, extrantsr (, ichseg (, lungct (1.20.5)
Reverse Suggestsneurovault, sri24, clever, NiftiArray, spant