Package neurobase details

  Package Description
'Neuroconductor' Base Package with Helper Functions for 'nifti' Objects

Base package for 'Neuroconductor', which includes many helper functions that interact with objects of class 'nifti', implemented by package 'oro.nifti', for reading/writing and also other manipulation functions.

Maintainer: John Muschelli < muschellij2 at gmail.com >

Documentation

 
  Citation
From within R, enter citation('neurobase')


To cite package 'neurobase' in publications use:

John Muschelli (NA). neurobase: 'Neuroconductor' Base Package with
Helper Functions for 'nifti' Objects. R package version 1.30.1.

A BibTeX entry for LaTeX users is

@Manual{,
title = {neurobase: 'Neuroconductor' Base Package with Helper Functions for 'nifti' Objects},
author = {John Muschelli},
note = {R package version 1.30.1},
}

 
  Issues

If you have any problems with this package you can open a new issue or check the already existing ones here.

 
  Versions
 
  Installation
To install this package, start R and enter:

source("https://neuroconductor.org/neurocLite.R")

# Default Install
neuro_install('neurobase')

# from GitHub
neuro_install('neurobase', release = "stable", release_repo = "github")
neuro_install('neurobase', release = "current", release_repo = "github")

More detailed installation instructions can be found here.

 
  Details

Initially submitted on September 30 2018 12:43PM
Last updated on May 29 2020 3:32PM
Package type standard
Source GitHub https://github.com/muschellij2/neurobase GitHub
Neuroconductor GitHub https://github.com/neuroconductor/neurobase GitHub
Dependsoro.nifti (0.10.3), R (3.2.0)
Importsmethods, abind, matrixStats, R.utils, graphics, grDevices, stats, RNifti
Suggeststestthat, ggplot2, knitr, rmarkdown, dplyr, reshape2, httr, covr, brainR
Reverse Dependsfslr
Reverse Importspapayar, itksnapr, ggneuro (1.16), oasis, penn115, afnir (1.27.0), aal, spm12r, dcmsort, medals (1.26.1), rcamino, smri.process (1.27.3), papayaWidget (1.27), rtapas (1.13.2), flexconn (1.27.7), mimosa (1.27.11), alvin, freesurfer, robex, RAVEL, extrantsr (1.27.11.1), ichseg (1.27.11.1), lungct (1.20.5)
Reverse Suggestsneurovault, sri24, clever, NiftiArray, spant