2021-05-16T20:02:00.5858650Z ##[section]Starting: Request a runner to run this job 2021-05-16T20:02:01.3233544Z Can't find any online and idle self-hosted runner in current repository that matches the required labels: 'ubuntu-20.04' 2021-05-16T20:02:01.3823442Z Can't find any online and idle self-hosted runner in current repository's organization/enterprise account that matches the required labels: 'ubuntu-20.04' 2021-05-16T20:02:01.4598630Z Found online and idle hosted runner in current repository's enterprise account that matches the required labels: 'ubuntu-20.04' 2021-05-16T20:02:01.5751474Z ##[section]Finishing: Request a runner to run this job 2021-05-16T20:02:09.4244692Z Current runner version: '2.278.0' 2021-05-16T20:02:09.4271328Z ##[group]Operating System 2021-05-16T20:02:09.4272159Z Ubuntu 2021-05-16T20:02:09.4272631Z 20.04.2 2021-05-16T20:02:09.4273021Z LTS 2021-05-16T20:02:09.4273513Z ##[endgroup] 2021-05-16T20:02:09.4274045Z ##[group]Virtual Environment 2021-05-16T20:02:09.4274715Z Environment: ubuntu-20.04 2021-05-16T20:02:09.4275280Z Version: 20210510.0 2021-05-16T20:02:09.4276223Z Included Software: https://github.com/actions/virtual-environments/blob/ubuntu20/20210510.0/images/linux/Ubuntu2004-README.md 2021-05-16T20:02:09.4277557Z Image Release: https://github.com/actions/virtual-environments/releases/tag/ubuntu20%2F20210510.0 2021-05-16T20:02:09.4278392Z ##[endgroup] 2021-05-16T20:02:09.4280247Z ##[group]GITHUB_TOKEN Permissions 2021-05-16T20:02:09.4281381Z Actions: write 2021-05-16T20:02:09.4281841Z Checks: write 2021-05-16T20:02:09.4282359Z Contents: write 2021-05-16T20:02:09.4282869Z Deployments: write 2021-05-16T20:02:09.4283470Z Issues: write 2021-05-16T20:02:09.4283985Z Metadata: read 2021-05-16T20:02:09.4284518Z Packages: write 2021-05-16T20:02:09.4285081Z PullRequests: write 2021-05-16T20:02:09.4285657Z RepositoryProjects: write 2021-05-16T20:02:09.4286318Z SecurityEvents: write 2021-05-16T20:02:09.4286822Z Statuses: write 2021-05-16T20:02:09.4287454Z ##[endgroup] 2021-05-16T20:02:09.4290255Z Prepare workflow directory 2021-05-16T20:02:09.5236756Z Prepare all required actions 2021-05-16T20:02:09.5247165Z Getting action download info 2021-05-16T20:02:09.8722792Z Download action repository 'actions/checkout@v2' 2021-05-16T20:02:11.6139787Z Download action repository 'r-lib/actions@master' 2021-05-16T20:02:12.2698755Z Download action repository 'adigherman/actions@master' 2021-05-16T20:02:14.5381234Z Download action repository 'msys2/setup-msys2@v2' 2021-05-16T20:02:14.8059273Z Download action repository 'actions/cache@v1' 2021-05-16T20:02:15.0557586Z Download action repository 'actions/upload-artifact@master' 2021-05-16T20:02:15.1927331Z Download action repository 'actions/upload-release-asset@v1.0.1' 2021-05-16T20:02:15.5694043Z ##[group]Run actions/checkout@v2 2021-05-16T20:02:15.5694604Z with: 2021-05-16T20:02:15.5695056Z repository: neuroconductor/neurobase 2021-05-16T20:02:15.5695976Z token: *** 2021-05-16T20:02:15.5696341Z ssh-strict: true 2021-05-16T20:02:15.5696800Z persist-credentials: true 2021-05-16T20:02:15.5697249Z clean: true 2021-05-16T20:02:15.5697606Z fetch-depth: 1 2021-05-16T20:02:15.5697968Z lfs: false 2021-05-16T20:02:15.5698317Z submodules: false 2021-05-16T20:02:15.5698669Z env: 2021-05-16T20:02:15.5699066Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:02:15.5699503Z TIC_DEPLOY_KEY: 2021-05-16T20:02:15.5700254Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:02:15.5701378Z GITHUB_PAT: *** 2021-05-16T20:02:15.5701756Z COVERALLS_TOKEN: 2021-05-16T20:02:15.5702197Z continue-on-error: true 2021-05-16T20:02:15.5702639Z VDIFFR_RUN_TESTS: 2021-05-16T20:02:15.5702998Z ##[endgroup] 2021-05-16T20:02:15.7642169Z Syncing repository: neuroconductor/neurobase 2021-05-16T20:02:15.7643010Z ##[group]Getting Git version info 2021-05-16T20:02:15.7644088Z Working directory is '/home/runner/work/neurobase/neurobase' 2021-05-16T20:02:15.7700897Z [command]/usr/bin/git version 2021-05-16T20:02:15.7824217Z git version 2.31.1 2021-05-16T20:02:15.7844862Z ##[endgroup] 2021-05-16T20:02:15.7851961Z Deleting the contents of '/home/runner/work/neurobase/neurobase' 2021-05-16T20:02:15.7857752Z ##[group]Initializing the repository 2021-05-16T20:02:15.7862103Z [command]/usr/bin/git init /home/runner/work/neurobase/neurobase 2021-05-16T20:02:15.7931862Z hint: Using 'master' as the name for the initial branch. This default branch name 2021-05-16T20:02:15.7933110Z hint: is subject to change. To configure the initial branch name to use in all 2021-05-16T20:02:15.7934086Z hint: of your new repositories, which will suppress this warning, call: 2021-05-16T20:02:15.7934820Z hint: 2021-05-16T20:02:15.7936142Z hint: git config --global init.defaultBranch 2021-05-16T20:02:15.7936909Z hint: 2021-05-16T20:02:15.7937588Z hint: Names commonly chosen instead of 'master' are 'main', 'trunk' and 2021-05-16T20:02:15.7938560Z hint: 'development'. The just-created branch can be renamed via this command: 2021-05-16T20:02:15.7939102Z hint: 2021-05-16T20:02:15.7939587Z hint: git branch -m 2021-05-16T20:02:15.7945557Z Initialized empty Git repository in /home/runner/work/neurobase/neurobase/.git/ 2021-05-16T20:02:15.7955061Z [command]/usr/bin/git remote add origin https://github.com/neuroconductor/neurobase 2021-05-16T20:02:15.8000414Z ##[endgroup] 2021-05-16T20:02:15.8000994Z ##[group]Disabling automatic garbage collection 2021-05-16T20:02:15.8007130Z [command]/usr/bin/git config --local gc.auto 0 2021-05-16T20:02:15.8044128Z ##[endgroup] 2021-05-16T20:02:15.8048455Z ##[group]Setting up auth 2021-05-16T20:02:15.8054784Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-05-16T20:02:15.8092513Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-05-16T20:02:15.8420895Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-05-16T20:02:15.8467676Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-05-16T20:02:15.8684404Z [command]/usr/bin/git config --local http.https://github.com/.extraheader AUTHORIZATION: basic *** 2021-05-16T20:02:15.8738105Z ##[endgroup] 2021-05-16T20:02:15.8738968Z ##[group]Fetching the repository 2021-05-16T20:02:15.8746477Z [command]/usr/bin/git -c protocol.version=2 fetch --no-tags --prune --progress --no-recurse-submodules --depth=1 origin +1d4b172915192d419b4defb2e56d84d7541c03cd:refs/tags/1.30.1.s 2021-05-16T20:02:16.0797720Z remote: Enumerating objects: 359, done. 2021-05-16T20:02:16.0799900Z remote: Counting objects: 0% (1/359) 2021-05-16T20:02:16.0804109Z remote: Counting objects: 1% (4/359) 2021-05-16T20:02:16.0805980Z remote: Counting objects: 2% (8/359) 2021-05-16T20:02:16.0814450Z remote: Counting objects: 3% (11/359) 2021-05-16T20:02:16.0815305Z remote: Counting objects: 4% (15/359) 2021-05-16T20:02:16.0816077Z remote: Counting objects: 5% (18/359) 2021-05-16T20:02:16.0816792Z remote: Counting objects: 6% (22/359) 2021-05-16T20:02:16.0817480Z remote: Counting objects: 7% (26/359) 2021-05-16T20:02:16.0821026Z remote: Counting objects: 8% (29/359) 2021-05-16T20:02:16.0822325Z remote: Counting objects: 9% (33/359) 2021-05-16T20:02:16.0823486Z remote: Counting objects: 10% (36/359) 2021-05-16T20:02:16.0824923Z remote: Counting objects: 11% (40/359) 2021-05-16T20:02:16.0826950Z remote: Counting objects: 12% (44/359) 2021-05-16T20:02:16.0827718Z remote: Counting objects: 13% (47/359) 2021-05-16T20:02:16.0831980Z remote: Counting objects: 14% (51/359) 2021-05-16T20:02:16.0836527Z remote: Counting objects: 15% (54/359) 2021-05-16T20:02:16.0837199Z remote: Counting objects: 16% (58/359) 2021-05-16T20:02:16.0837843Z remote: Counting objects: 17% (62/359) 2021-05-16T20:02:16.0838455Z remote: Counting objects: 18% (65/359) 2021-05-16T20:02:16.0839104Z remote: Counting objects: 19% (69/359) 2021-05-16T20:02:16.0839718Z remote: Counting objects: 20% (72/359) 2021-05-16T20:02:16.0840340Z remote: Counting objects: 21% (76/359) 2021-05-16T20:02:16.0840959Z remote: Counting objects: 22% (79/359) 2021-05-16T20:02:16.0841633Z remote: Counting objects: 23% (83/359) 2021-05-16T20:02:16.0842270Z remote: Counting objects: 24% (87/359) 2021-05-16T20:02:16.0842838Z remote: Counting objects: 25% (90/359) 2021-05-16T20:02:16.0843630Z remote: Counting objects: 26% (94/359) 2021-05-16T20:02:16.0844278Z remote: Counting objects: 27% (97/359) 2021-05-16T20:02:16.0844835Z remote: Counting objects: 28% (101/359) 2021-05-16T20:02:16.0845384Z remote: Counting objects: 29% (105/359) 2021-05-16T20:02:16.0845935Z remote: Counting objects: 30% (108/359) 2021-05-16T20:02:16.0846482Z remote: Counting objects: 31% (112/359) 2021-05-16T20:02:16.0847033Z remote: Counting objects: 32% (115/359) 2021-05-16T20:02:16.0847666Z remote: Counting objects: 33% (119/359) 2021-05-16T20:02:16.0848140Z remote: Counting objects: 34% (123/359) 2021-05-16T20:02:16.0848624Z remote: Counting objects: 35% (126/359) 2021-05-16T20:02:16.0849088Z remote: Counting objects: 36% (130/359) 2021-05-16T20:02:16.0849571Z remote: Counting objects: 37% (133/359) 2021-05-16T20:02:16.0850045Z remote: Counting objects: 38% (137/359) 2021-05-16T20:02:16.0850536Z remote: Counting objects: 39% (141/359) 2021-05-16T20:02:16.0851008Z remote: Counting objects: 40% (144/359) 2021-05-16T20:02:16.0851490Z remote: Counting objects: 41% (148/359) 2021-05-16T20:02:16.0851963Z remote: Counting objects: 42% (151/359) 2021-05-16T20:02:16.0852719Z remote: Counting objects: 43% (155/359) 2021-05-16T20:02:16.0853206Z remote: Counting objects: 44% (158/359) 2021-05-16T20:02:16.0853673Z remote: Counting objects: 45% (162/359) 2021-05-16T20:02:16.0854158Z remote: Counting objects: 46% (166/359) 2021-05-16T20:02:16.0854625Z remote: Counting objects: 47% (169/359) 2021-05-16T20:02:16.0864080Z remote: Counting objects: 48% (173/359) 2021-05-16T20:02:16.0864583Z remote: Counting objects: 49% (176/359) 2021-05-16T20:02:16.0865082Z remote: Counting objects: 50% (180/359) 2021-05-16T20:02:16.0865556Z remote: Counting objects: 51% (184/359) 2021-05-16T20:02:16.0866182Z remote: Counting objects: 52% (187/359) 2021-05-16T20:02:16.0866663Z remote: Counting objects: 53% (191/359) 2021-05-16T20:02:16.0868257Z remote: Counting objects: 54% (194/359) 2021-05-16T20:02:16.0868746Z remote: Counting objects: 55% (198/359) 2021-05-16T20:02:16.0869241Z remote: Counting objects: 56% (202/359) 2021-05-16T20:02:16.0869726Z remote: Counting objects: 57% (205/359) 2021-05-16T20:02:16.0870199Z remote: Counting objects: 58% (209/359) 2021-05-16T20:02:16.0870682Z remote: Counting objects: 59% (212/359) 2021-05-16T20:02:16.0871156Z remote: Counting objects: 60% (216/359) 2021-05-16T20:02:16.0871641Z remote: Counting objects: 61% (219/359) 2021-05-16T20:02:16.0872112Z remote: Counting objects: 62% (223/359) 2021-05-16T20:02:16.0872591Z remote: Counting objects: 63% (227/359) 2021-05-16T20:02:16.0873113Z remote: Counting objects: 64% (230/359) 2021-05-16T20:02:16.0873586Z remote: Counting objects: 65% (234/359) 2021-05-16T20:02:16.0874062Z remote: Counting objects: 66% (237/359) 2021-05-16T20:02:16.0874531Z remote: Counting objects: 67% (241/359) 2021-05-16T20:02:16.0875010Z remote: Counting objects: 68% (245/359) 2021-05-16T20:02:16.0875482Z remote: Counting objects: 69% (248/359) 2021-05-16T20:02:16.0875965Z remote: Counting objects: 70% (252/359) 2021-05-16T20:02:16.0876447Z remote: Counting objects: 71% (255/359) 2021-05-16T20:02:16.0876914Z remote: Counting objects: 72% (259/359) 2021-05-16T20:02:16.0877393Z remote: Counting objects: 73% (263/359) 2021-05-16T20:02:16.0877870Z remote: Counting objects: 74% (266/359) 2021-05-16T20:02:16.0878350Z remote: Counting objects: 75% (270/359) 2021-05-16T20:02:16.0878823Z remote: Counting objects: 76% (273/359) 2021-05-16T20:02:16.0879302Z remote: Counting objects: 77% (277/359) 2021-05-16T20:02:16.0879872Z remote: Counting objects: 78% (281/359) 2021-05-16T20:02:16.0881363Z remote: Counting objects: 79% (284/359) 2021-05-16T20:02:16.0881862Z remote: Counting objects: 80% (288/359) 2021-05-16T20:02:16.0882331Z remote: Counting objects: 81% (291/359) 2021-05-16T20:02:16.0882815Z remote: Counting objects: 82% (295/359) 2021-05-16T20:02:16.0883281Z remote: Counting objects: 83% (298/359) 2021-05-16T20:02:16.0883763Z remote: Counting objects: 84% (302/359) 2021-05-16T20:02:16.0884233Z remote: Counting objects: 85% (306/359) 2021-05-16T20:02:16.0884712Z remote: Counting objects: 86% (309/359) 2021-05-16T20:02:16.0885177Z remote: Counting objects: 87% (313/359) 2021-05-16T20:02:16.0885654Z remote: Counting objects: 88% (316/359) 2021-05-16T20:02:16.0886140Z remote: Counting objects: 89% (320/359) 2021-05-16T20:02:16.0886604Z remote: Counting objects: 90% (324/359) 2021-05-16T20:02:16.0887082Z remote: Counting objects: 91% (327/359) 2021-05-16T20:02:16.0887554Z remote: Counting objects: 92% (331/359) 2021-05-16T20:02:16.0888032Z remote: Counting objects: 93% (334/359) 2021-05-16T20:02:16.0888500Z remote: Counting objects: 94% (338/359) 2021-05-16T20:02:16.0889977Z remote: Counting objects: 95% (342/359) 2021-05-16T20:02:16.0890451Z remote: Counting objects: 96% (345/359) 2021-05-16T20:02:16.0890938Z remote: Counting objects: 97% (349/359) 2021-05-16T20:02:16.0891406Z remote: Counting objects: 98% (352/359) 2021-05-16T20:02:16.0891888Z remote: Counting objects: 99% (356/359) 2021-05-16T20:02:16.0892678Z remote: Counting objects: 100% (359/359) 2021-05-16T20:02:16.0893174Z remote: Counting objects: 100% (359/359), done. 2021-05-16T20:02:16.0893711Z remote: Compressing objects: 0% (1/299) 2021-05-16T20:02:16.0894232Z remote: Compressing objects: 1% (3/299) 2021-05-16T20:02:16.0894763Z remote: Compressing objects: 2% (6/299) 2021-05-16T20:02:16.0895373Z remote: Compressing objects: 3% (9/299) 2021-05-16T20:02:16.0895904Z remote: Compressing objects: 4% (12/299) 2021-05-16T20:02:16.0896441Z remote: Compressing objects: 5% (15/299) 2021-05-16T20:02:16.0896958Z remote: Compressing objects: 6% (18/299) 2021-05-16T20:02:16.0897582Z remote: Compressing objects: 7% (21/299) 2021-05-16T20:02:16.0898102Z remote: Compressing objects: 8% (24/299) 2021-05-16T20:02:16.0898628Z remote: Compressing objects: 9% (27/299) 2021-05-16T20:02:16.6133214Z remote: Compressing objects: 10% (30/299) 2021-05-16T20:02:16.6174633Z remote: Compressing objects: 11% (33/299) 2021-05-16T20:02:16.6175765Z remote: Compressing objects: 12% (36/299) 2021-05-16T20:02:16.6176687Z remote: Compressing objects: 13% (39/299) 2021-05-16T20:02:16.6177593Z remote: Compressing objects: 14% (42/299) 2021-05-16T20:02:16.6178561Z remote: Compressing objects: 15% (45/299) 2021-05-16T20:02:16.6179527Z remote: Compressing objects: 16% (48/299) 2021-05-16T20:02:16.6214658Z remote: Compressing objects: 17% (51/299) 2021-05-16T20:02:16.6215287Z remote: Compressing objects: 18% (54/299) 2021-05-16T20:02:16.6215885Z remote: Compressing objects: 19% (57/299) 2021-05-16T20:02:16.6216494Z remote: Compressing objects: 20% (60/299) 2021-05-16T20:02:16.6217103Z remote: Compressing objects: 21% (63/299) 2021-05-16T20:02:16.6217692Z remote: Compressing objects: 22% (66/299) 2021-05-16T20:02:16.6218293Z remote: Compressing objects: 23% (69/299) 2021-05-16T20:02:16.6218887Z remote: Compressing objects: 24% (72/299) 2021-05-16T20:02:16.6219490Z remote: Compressing objects: 25% (75/299) 2021-05-16T20:02:16.6220084Z remote: Compressing objects: 26% (78/299) 2021-05-16T20:02:16.6220691Z remote: Compressing objects: 27% (81/299) 2021-05-16T20:02:16.6221494Z remote: Compressing objects: 28% (84/299) 2021-05-16T20:02:16.6222101Z remote: Compressing objects: 29% (87/299) 2021-05-16T20:02:16.6222707Z remote: Compressing objects: 30% (90/299) 2021-05-16T20:02:16.6223293Z remote: Compressing objects: 31% (93/299) 2021-05-16T20:02:16.6223939Z remote: Compressing objects: 32% (96/299) 2021-05-16T20:02:16.6224528Z remote: Compressing objects: 33% (99/299) 2021-05-16T20:02:16.6225132Z remote: Compressing objects: 34% (102/299) 2021-05-16T20:02:16.6225725Z remote: Compressing objects: 35% (105/299) 2021-05-16T20:02:16.6226333Z remote: Compressing objects: 36% (108/299) 2021-05-16T20:02:16.6226925Z remote: Compressing objects: 37% (111/299) 2021-05-16T20:02:16.6227529Z remote: Compressing objects: 38% (114/299) 2021-05-16T20:02:16.6228138Z remote: Compressing objects: 39% (117/299) 2021-05-16T20:02:16.6228728Z remote: Compressing objects: 40% (120/299) 2021-05-16T20:02:16.6229347Z remote: Compressing objects: 41% (123/299) 2021-05-16T20:02:16.6229936Z remote: Compressing objects: 42% (126/299) 2021-05-16T20:02:16.6230544Z remote: Compressing objects: 43% (129/299) 2021-05-16T20:02:16.6231133Z remote: Compressing objects: 44% (132/299) 2021-05-16T20:02:16.6231733Z remote: Compressing objects: 45% (135/299) 2021-05-16T20:02:16.6232320Z remote: Compressing objects: 46% (138/299) 2021-05-16T20:02:16.6232924Z remote: Compressing objects: 47% (141/299) 2021-05-16T20:02:16.6233528Z remote: Compressing objects: 48% (144/299) 2021-05-16T20:02:16.6234111Z remote: Compressing objects: 49% (147/299) 2021-05-16T20:02:16.6234713Z remote: Compressing objects: 50% (150/299) 2021-05-16T20:02:16.6235301Z remote: Compressing objects: 51% (153/299) 2021-05-16T20:02:16.6235896Z remote: Compressing objects: 52% (156/299) 2021-05-16T20:02:16.6236628Z remote: Compressing objects: 53% (159/299) 2021-05-16T20:02:16.6237162Z remote: Compressing objects: 54% (162/299) 2021-05-16T20:02:16.6237674Z remote: Compressing objects: 55% (165/299) 2021-05-16T20:02:16.6238203Z remote: Compressing objects: 56% (168/299) 2021-05-16T20:02:16.6238730Z remote: Compressing objects: 57% (171/299) 2021-05-16T20:02:16.6239238Z remote: Compressing objects: 58% (174/299) 2021-05-16T20:02:16.6239762Z remote: Compressing objects: 59% (177/299) 2021-05-16T20:02:16.6240271Z remote: Compressing objects: 60% (180/299) 2021-05-16T20:02:16.6240795Z remote: Compressing objects: 61% (183/299) 2021-05-16T20:02:16.6241301Z remote: Compressing objects: 62% (186/299) 2021-05-16T20:02:16.6241827Z remote: Compressing objects: 63% (189/299) 2021-05-16T20:02:16.6242336Z remote: Compressing objects: 64% (192/299) 2021-05-16T20:02:16.6242857Z remote: Compressing objects: 65% (195/299) 2021-05-16T20:02:16.6243386Z remote: Compressing objects: 66% (198/299) 2021-05-16T20:02:16.6243894Z remote: Compressing objects: 67% (201/299) 2021-05-16T20:02:16.6244418Z remote: Compressing objects: 68% (204/299) 2021-05-16T20:02:16.6244927Z remote: Compressing objects: 69% (207/299) 2021-05-16T20:02:16.6245445Z remote: Compressing objects: 70% (210/299) 2021-05-16T20:02:16.6245954Z remote: Compressing objects: 71% (213/299) 2021-05-16T20:02:16.6246477Z remote: Compressing objects: 72% (216/299) 2021-05-16T20:02:16.6246987Z remote: Compressing objects: 73% (219/299) 2021-05-16T20:02:16.6247510Z remote: Compressing objects: 74% (222/299) 2021-05-16T20:02:16.6248030Z remote: Compressing objects: 75% (225/299) 2021-05-16T20:02:16.6248539Z remote: Compressing objects: 76% (228/299) 2021-05-16T20:02:16.6249057Z remote: Compressing objects: 77% (231/299) 2021-05-16T20:02:16.6249567Z remote: Compressing objects: 78% (234/299) 2021-05-16T20:02:16.6250143Z remote: Compressing objects: 79% (237/299) 2021-05-16T20:02:16.6250651Z remote: Compressing objects: 80% (240/299) 2021-05-16T20:02:16.6328293Z remote: Compressing objects: 81% (243/299) 2021-05-16T20:02:16.6328872Z remote: Compressing objects: 82% (246/299) 2021-05-16T20:02:16.6329407Z remote: Compressing objects: 83% (249/299) 2021-05-16T20:02:16.6329923Z remote: Compressing objects: 84% (252/299) 2021-05-16T20:02:16.6330451Z remote: Compressing objects: 85% (255/299) 2021-05-16T20:02:16.6330971Z remote: Compressing objects: 86% (258/299) 2021-05-16T20:02:16.6331499Z remote: Compressing objects: 87% (261/299) 2021-05-16T20:02:16.6332007Z remote: Compressing objects: 88% (264/299) 2021-05-16T20:02:16.6334060Z remote: Compressing objects: 89% (267/299) 2021-05-16T20:02:16.6334576Z remote: Compressing objects: 90% (270/299) 2021-05-16T20:02:16.6335321Z remote: Compressing objects: 91% (273/299) 2021-05-16T20:02:16.6335841Z remote: Compressing objects: 92% (276/299) 2021-05-16T20:02:16.6336369Z remote: Compressing objects: 93% (279/299) 2021-05-16T20:02:16.6336882Z remote: Compressing objects: 94% (282/299) 2021-05-16T20:02:16.6337407Z remote: Compressing objects: 95% (285/299) 2021-05-16T20:02:16.6337919Z remote: Compressing objects: 96% (288/299) 2021-05-16T20:02:16.6338446Z remote: Compressing objects: 97% (291/299) 2021-05-16T20:02:16.6338956Z remote: Compressing objects: 98% (294/299) 2021-05-16T20:02:16.6339480Z remote: Compressing objects: 99% (297/299) 2021-05-16T20:02:16.6340008Z remote: Compressing objects: 100% (299/299) 2021-05-16T20:02:16.6340542Z remote: Compressing objects: 100% (299/299), done. 2021-05-16T20:02:16.6341043Z Receiving objects: 0% (1/359) 2021-05-16T20:02:16.6341465Z Receiving objects: 1% (4/359) 2021-05-16T20:02:16.6341894Z Receiving objects: 2% (8/359) 2021-05-16T20:02:16.6342454Z Receiving objects: 3% (11/359) 2021-05-16T20:02:16.6342904Z Receiving objects: 4% (15/359) 2021-05-16T20:02:16.6343324Z Receiving objects: 5% (18/359) 2021-05-16T20:02:16.6343765Z Receiving objects: 6% (22/359) 2021-05-16T20:02:16.6344201Z Receiving objects: 7% (26/359) 2021-05-16T20:02:16.6344619Z Receiving objects: 8% (29/359) 2021-05-16T20:02:16.6345048Z Receiving objects: 9% (33/359) 2021-05-16T20:02:16.6345466Z Receiving objects: 10% (36/359) 2021-05-16T20:02:16.6345901Z Receiving objects: 11% (40/359) 2021-05-16T20:02:16.6346316Z Receiving objects: 12% (44/359) 2021-05-16T20:02:16.6346745Z Receiving objects: 13% (47/359) 2021-05-16T20:02:16.6347166Z Receiving objects: 14% (51/359) 2021-05-16T20:02:16.6347704Z Receiving objects: 15% (54/359) 2021-05-16T20:02:16.6348129Z Receiving objects: 16% (58/359) 2021-05-16T20:02:16.6348558Z Receiving objects: 17% (62/359) 2021-05-16T20:02:16.6349073Z Receiving objects: 18% (65/359) 2021-05-16T20:02:16.6349552Z Receiving objects: 19% (69/359) 2021-05-16T20:02:16.6350009Z Receiving objects: 20% (72/359) 2021-05-16T20:02:16.6350431Z Receiving objects: 21% (76/359) 2021-05-16T20:02:16.6350858Z Receiving objects: 22% (79/359) 2021-05-16T20:02:16.6351273Z Receiving objects: 23% (83/359) 2021-05-16T20:02:16.6351702Z Receiving objects: 24% (87/359) 2021-05-16T20:02:16.6352118Z Receiving objects: 25% (90/359) 2021-05-16T20:02:16.6352550Z Receiving objects: 26% (94/359) 2021-05-16T20:02:16.6352965Z Receiving objects: 27% (97/359) 2021-05-16T20:02:16.6353396Z Receiving objects: 28% (101/359) 2021-05-16T20:02:16.6353819Z Receiving objects: 29% (105/359) 2021-05-16T20:02:16.6354257Z Receiving objects: 30% (108/359) 2021-05-16T20:02:16.6354692Z Receiving objects: 31% (112/359) 2021-05-16T20:02:16.6355120Z Receiving objects: 32% (115/359) 2021-05-16T20:02:16.6355555Z Receiving objects: 33% (119/359) 2021-05-16T20:02:16.6355973Z Receiving objects: 34% (123/359) 2021-05-16T20:02:16.6356404Z Receiving objects: 35% (126/359) 2021-05-16T20:02:16.6356914Z Receiving objects: 36% (130/359) 2021-05-16T20:02:16.6357357Z Receiving objects: 37% (133/359) 2021-05-16T20:02:16.6357835Z Receiving objects: 38% (137/359) 2021-05-16T20:02:16.6358253Z Receiving objects: 39% (141/359) 2021-05-16T20:02:16.6358686Z Receiving objects: 40% (144/359) 2021-05-16T20:02:16.6359106Z Receiving objects: 41% (148/359) 2021-05-16T20:02:16.6359545Z Receiving objects: 42% (151/359) 2021-05-16T20:02:16.6359977Z Receiving objects: 43% (155/359) 2021-05-16T20:02:16.6360400Z Receiving objects: 44% (158/359) 2021-05-16T20:02:16.6360828Z Receiving objects: 45% (162/359) 2021-05-16T20:02:16.6361247Z Receiving objects: 46% (166/359) 2021-05-16T20:02:16.6361683Z Receiving objects: 47% (169/359) 2021-05-16T20:02:16.6362101Z Receiving objects: 48% (173/359) 2021-05-16T20:02:16.6362533Z Receiving objects: 49% (176/359) 2021-05-16T20:02:16.6362954Z Receiving objects: 50% (180/359) 2021-05-16T20:02:16.6363384Z Receiving objects: 51% (184/359) 2021-05-16T20:02:16.6363814Z Receiving objects: 52% (187/359) 2021-05-16T20:02:16.6364246Z Receiving objects: 53% (191/359) 2021-05-16T20:02:16.6364676Z Receiving objects: 54% (194/359) 2021-05-16T20:02:16.6365090Z Receiving objects: 55% (198/359) 2021-05-16T20:02:16.6365520Z Receiving objects: 56% (202/359) 2021-05-16T20:02:16.6365944Z Receiving objects: 57% (205/359) 2021-05-16T20:02:16.6366374Z Receiving objects: 58% (209/359) 2021-05-16T20:02:16.6366791Z Receiving objects: 59% (212/359) 2021-05-16T20:02:16.6367219Z Receiving objects: 60% (216/359) 2021-05-16T20:02:16.6367638Z Receiving objects: 61% (219/359) 2021-05-16T20:02:16.6368071Z Receiving objects: 62% (223/359) 2021-05-16T20:02:16.6368488Z Receiving objects: 63% (227/359) 2021-05-16T20:02:16.6368919Z Receiving objects: 64% (230/359) 2021-05-16T20:02:16.6369347Z Receiving objects: 65% (234/359) 2021-05-16T20:02:16.6369763Z Receiving objects: 66% (237/359) 2021-05-16T20:02:16.6370194Z Receiving objects: 67% (241/359) 2021-05-16T20:02:16.6370678Z Receiving objects: 68% (245/359) 2021-05-16T20:02:16.6371114Z Receiving objects: 69% (248/359) 2021-05-16T20:02:16.6371530Z Receiving objects: 70% (252/359) 2021-05-16T20:02:16.6371959Z Receiving objects: 71% (255/359) 2021-05-16T20:02:16.6391723Z Receiving objects: 72% (259/359) 2021-05-16T20:02:16.6392179Z Receiving objects: 73% (263/359) 2021-05-16T20:02:16.6393332Z remote: Total 359 (delta 103), reused 158 (delta 51), pack-reused 0 2021-05-16T20:02:16.6393878Z Receiving objects: 74% (266/359) 2021-05-16T20:02:16.6394316Z Receiving objects: 75% (270/359) 2021-05-16T20:02:16.6394735Z Receiving objects: 76% (273/359) 2021-05-16T20:02:16.6395165Z Receiving objects: 77% (277/359) 2021-05-16T20:02:16.6395583Z Receiving objects: 78% (281/359) 2021-05-16T20:02:16.6396014Z Receiving objects: 79% (284/359) 2021-05-16T20:02:16.6396440Z Receiving objects: 80% (288/359) 2021-05-16T20:02:16.6396869Z Receiving objects: 81% (291/359) 2021-05-16T20:02:16.6397287Z Receiving objects: 82% (295/359) 2021-05-16T20:02:16.6397734Z Receiving objects: 83% (298/359) 2021-05-16T20:02:16.6398153Z Receiving objects: 84% (302/359) 2021-05-16T20:02:16.6398589Z Receiving objects: 85% (306/359) 2021-05-16T20:02:16.6399007Z Receiving objects: 86% (309/359) 2021-05-16T20:02:16.6399438Z Receiving objects: 87% (313/359) 2021-05-16T20:02:16.6399864Z Receiving objects: 88% (316/359) 2021-05-16T20:02:16.6400282Z Receiving objects: 89% (320/359) 2021-05-16T20:02:16.6400716Z Receiving objects: 90% (324/359) 2021-05-16T20:02:16.6401132Z Receiving objects: 91% (327/359) 2021-05-16T20:02:16.6401559Z Receiving objects: 92% (331/359) 2021-05-16T20:02:16.6401978Z Receiving objects: 93% (334/359) 2021-05-16T20:02:16.6402405Z Receiving objects: 94% (338/359) 2021-05-16T20:02:16.6402822Z Receiving objects: 95% (342/359) 2021-05-16T20:02:16.6403256Z Receiving objects: 96% (345/359) 2021-05-16T20:02:16.6403674Z Receiving objects: 97% (349/359) 2021-05-16T20:02:16.6404101Z Receiving objects: 98% (352/359) 2021-05-16T20:02:16.6404694Z Receiving objects: 99% (356/359) 2021-05-16T20:02:16.6405114Z Receiving objects: 100% (359/359) 2021-05-16T20:02:16.6405611Z Receiving objects: 100% (359/359), 5.18 MiB | 16.68 MiB/s, done. 2021-05-16T20:02:16.6406083Z Resolving deltas: 0% (0/103) 2021-05-16T20:02:16.6406504Z Resolving deltas: 1% (2/103) 2021-05-16T20:02:16.6406908Z Resolving deltas: 2% (3/103) 2021-05-16T20:02:16.6407320Z Resolving deltas: 3% (4/103) 2021-05-16T20:02:16.6407729Z Resolving deltas: 4% (5/103) 2021-05-16T20:02:16.6408141Z Resolving deltas: 5% (6/103) 2021-05-16T20:02:16.6408543Z Resolving deltas: 6% (7/103) 2021-05-16T20:02:16.6408957Z Resolving deltas: 7% (8/103) 2021-05-16T20:02:16.6409369Z Resolving deltas: 8% (9/103) 2021-05-16T20:02:16.6409778Z Resolving deltas: 9% (10/103) 2021-05-16T20:02:16.6410191Z Resolving deltas: 10% (11/103) 2021-05-16T20:02:16.6410598Z Resolving deltas: 11% (12/103) 2021-05-16T20:02:16.6411012Z Resolving deltas: 12% (13/103) 2021-05-16T20:02:16.6411425Z Resolving deltas: 13% (14/103) 2021-05-16T20:02:16.6411848Z Resolving deltas: 14% (15/103) 2021-05-16T20:02:16.6414350Z Resolving deltas: 15% (16/103) 2021-05-16T20:02:16.6414781Z Resolving deltas: 16% (17/103) 2021-05-16T20:02:16.6415187Z Resolving deltas: 17% (18/103) 2021-05-16T20:02:16.6415604Z Resolving deltas: 18% (19/103) 2021-05-16T20:02:16.6416012Z Resolving deltas: 19% (20/103) 2021-05-16T20:02:16.6416440Z Resolving deltas: 20% (21/103) 2021-05-16T20:02:16.6416855Z Resolving deltas: 21% (22/103) 2021-05-16T20:02:16.6417263Z Resolving deltas: 22% (23/103) 2021-05-16T20:02:16.6417679Z Resolving deltas: 23% (24/103) 2021-05-16T20:02:16.6418087Z Resolving deltas: 24% (25/103) 2021-05-16T20:02:16.6418510Z Resolving deltas: 25% (26/103) 2021-05-16T20:02:16.6418915Z Resolving deltas: 26% (27/103) 2021-05-16T20:02:16.6419339Z Resolving deltas: 27% (28/103) 2021-05-16T20:02:16.6419747Z Resolving deltas: 28% (29/103) 2021-05-16T20:02:16.6420166Z Resolving deltas: 29% (30/103) 2021-05-16T20:02:16.6420682Z Resolving deltas: 30% (31/103) 2021-05-16T20:02:16.6421104Z Resolving deltas: 31% (32/103) 2021-05-16T20:02:16.6421516Z Resolving deltas: 32% (33/103) 2021-05-16T20:02:16.6422002Z Resolving deltas: 33% (34/103) 2021-05-16T20:02:16.6422436Z Resolving deltas: 34% (36/103) 2021-05-16T20:02:16.6422847Z Resolving deltas: 35% (37/103) 2021-05-16T20:02:16.6423265Z Resolving deltas: 36% (38/103) 2021-05-16T20:02:16.6423699Z Resolving deltas: 37% (39/103) 2021-05-16T20:02:16.6424117Z Resolving deltas: 38% (40/103) 2021-05-16T20:02:16.6424522Z Resolving deltas: 39% (41/103) 2021-05-16T20:02:16.6424940Z Resolving deltas: 40% (42/103) 2021-05-16T20:02:16.6425341Z Resolving deltas: 41% (43/103) 2021-05-16T20:02:16.6425757Z Resolving deltas: 42% (44/103) 2021-05-16T20:02:16.6426161Z Resolving deltas: 43% (45/103) 2021-05-16T20:02:16.6426574Z Resolving deltas: 44% (46/103) 2021-05-16T20:02:16.6426992Z Resolving deltas: 45% (47/103) 2021-05-16T20:02:16.6427404Z Resolving deltas: 46% (48/103) 2021-05-16T20:02:16.6427824Z Resolving deltas: 47% (49/103) 2021-05-16T20:02:16.6428226Z Resolving deltas: 48% (50/103) 2021-05-16T20:02:16.6428641Z Resolving deltas: 49% (51/103) 2021-05-16T20:02:16.6429045Z Resolving deltas: 50% (52/103) 2021-05-16T20:02:16.6429464Z Resolving deltas: 51% (53/103) 2021-05-16T20:02:16.6429865Z Resolving deltas: 52% (54/103) 2021-05-16T20:02:16.6430284Z Resolving deltas: 53% (55/103) 2021-05-16T20:02:16.6430685Z Resolving deltas: 54% (56/103) 2021-05-16T20:02:16.6431101Z Resolving deltas: 55% (57/103) 2021-05-16T20:02:16.6431505Z Resolving deltas: 56% (58/103) 2021-05-16T20:02:16.6431922Z Resolving deltas: 57% (59/103) 2021-05-16T20:02:16.6432335Z Resolving deltas: 58% (60/103) 2021-05-16T20:02:16.6432736Z Resolving deltas: 59% (61/103) 2021-05-16T20:02:16.6433149Z Resolving deltas: 60% (62/103) 2021-05-16T20:02:16.6433556Z Resolving deltas: 61% (63/103) 2021-05-16T20:02:16.6433974Z Resolving deltas: 62% (64/103) 2021-05-16T20:02:16.6434378Z Resolving deltas: 63% (65/103) 2021-05-16T20:02:16.6434868Z Resolving deltas: 64% (66/103) 2021-05-16T20:02:16.6435270Z Resolving deltas: 65% (67/103) 2021-05-16T20:02:16.6435685Z Resolving deltas: 66% (68/103) 2021-05-16T20:02:16.6436088Z Resolving deltas: 67% (70/103) 2021-05-16T20:02:16.6436502Z Resolving deltas: 68% (71/103) 2021-05-16T20:02:16.6436903Z Resolving deltas: 69% (72/103) 2021-05-16T20:02:16.6437318Z Resolving deltas: 70% (73/103) 2021-05-16T20:02:16.6437732Z Resolving deltas: 71% (74/103) 2021-05-16T20:02:16.6438141Z Resolving deltas: 72% (75/103) 2021-05-16T20:02:16.6438556Z Resolving deltas: 73% (76/103) 2021-05-16T20:02:16.6438965Z Resolving deltas: 74% (77/103) 2021-05-16T20:02:16.6439380Z Resolving deltas: 75% (78/103) 2021-05-16T20:02:16.6439787Z Resolving deltas: 76% (79/103) 2021-05-16T20:02:16.6440205Z Resolving deltas: 77% (80/103) 2021-05-16T20:02:16.6440608Z Resolving deltas: 78% (81/103) 2021-05-16T20:02:16.6441030Z Resolving deltas: 79% (82/103) 2021-05-16T20:02:16.6441440Z Resolving deltas: 80% (83/103) 2021-05-16T20:02:16.6441860Z Resolving deltas: 81% (84/103) 2021-05-16T20:02:16.6442312Z Resolving deltas: 82% (85/103) 2021-05-16T20:02:16.6442757Z Resolving deltas: 83% (86/103) 2021-05-16T20:02:16.6443253Z Resolving deltas: 84% (87/103) 2021-05-16T20:02:16.6443690Z Resolving deltas: 85% (88/103) 2021-05-16T20:02:16.6444199Z Resolving deltas: 86% (89/103) 2021-05-16T20:02:16.6444711Z Resolving deltas: 87% (90/103) 2021-05-16T20:02:16.6445143Z Resolving deltas: 88% (91/103) 2021-05-16T20:02:16.6445623Z Resolving deltas: 89% (92/103) 2021-05-16T20:02:16.6446066Z Resolving deltas: 90% (93/103) 2021-05-16T20:02:16.6446586Z Resolving deltas: 91% (94/103) 2021-05-16T20:02:16.6447029Z Resolving deltas: 92% (95/103) 2021-05-16T20:02:16.6447517Z Resolving deltas: 93% (96/103) 2021-05-16T20:02:16.6447962Z Resolving deltas: 94% (97/103) 2021-05-16T20:02:16.6448457Z Resolving deltas: 95% (98/103) 2021-05-16T20:02:16.6448898Z Resolving deltas: 96% (99/103) 2021-05-16T20:02:16.6449471Z Resolving deltas: 97% (100/103) 2021-05-16T20:02:16.6449917Z Resolving deltas: 98% (101/103) 2021-05-16T20:02:16.6450394Z Resolving deltas: 99% (102/103) 2021-05-16T20:02:16.6450873Z Resolving deltas: 100% (103/103) 2021-05-16T20:02:16.6451344Z Resolving deltas: 100% (103/103), done. 2021-05-16T20:02:16.6452046Z From https://github.com/neuroconductor/neurobase 2021-05-16T20:02:16.6493701Z * [new ref] 1d4b172915192d419b4defb2e56d84d7541c03cd -> 1.30.1.s 2021-05-16T20:02:16.6494661Z ##[endgroup] 2021-05-16T20:02:16.6495288Z ##[group]Determining the checkout info 2021-05-16T20:02:16.6495941Z ##[endgroup] 2021-05-16T20:02:16.6496516Z ##[group]Checking out the ref 2021-05-16T20:02:16.6497294Z [command]/usr/bin/git checkout --progress --force refs/tags/1.30.1.s 2021-05-16T20:02:16.6579144Z Note: switching to 'refs/tags/1.30.1.s'. 2021-05-16T20:02:16.6579458Z 2021-05-16T20:02:16.6580260Z You are in 'detached HEAD' state. You can look around, make experimental 2021-05-16T20:02:16.6581098Z changes and commit them, and you can discard any commits you make in this 2021-05-16T20:02:16.6587019Z state without impacting any branches by switching back to a branch. 2021-05-16T20:02:16.6587525Z 2021-05-16T20:02:16.6588083Z If you want to create a new branch to retain commits you create, you may 2021-05-16T20:02:16.6589099Z do so (now or later) by using -c with the switch command. Example: 2021-05-16T20:02:16.6589515Z 2021-05-16T20:02:16.6590085Z git switch -c 2021-05-16T20:02:16.6590436Z 2021-05-16T20:02:16.6590882Z Or undo this operation with: 2021-05-16T20:02:16.6591190Z 2021-05-16T20:02:16.6591622Z git switch - 2021-05-16T20:02:16.6591881Z 2021-05-16T20:02:16.6592484Z Turn off this advice by setting config variable advice.detachedHead to false 2021-05-16T20:02:16.6592996Z 2021-05-16T20:02:16.6593444Z HEAD is now at 1d4b172 Version id 55 stable 2021-05-16T20:02:16.6594305Z ##[endgroup] 2021-05-16T20:02:16.6643397Z [command]/usr/bin/git log -1 --format='%H' 2021-05-16T20:02:16.6682261Z '1d4b172915192d419b4defb2e56d84d7541c03cd' 2021-05-16T20:02:16.6823832Z ##[group]Run r-lib/actions/setup-r@master 2021-05-16T20:02:16.6824354Z with: 2021-05-16T20:02:16.6824725Z r-version: devel 2021-05-16T20:02:16.6825174Z Ncpus: 1 2021-05-16T20:02:16.6825578Z crayon.enabled: NULL 2021-05-16T20:02:16.6826146Z remove-openmp-macos: true 2021-05-16T20:02:16.6826686Z http-user-agent: default 2021-05-16T20:02:16.6827201Z install-r: true 2021-05-16T20:02:16.6827822Z windows-path-include-mingw: true 2021-05-16T20:02:16.6828339Z env: 2021-05-16T20:02:16.6828813Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:02:16.6829288Z TIC_DEPLOY_KEY: 2021-05-16T20:02:16.6830116Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:02:16.6831864Z GITHUB_PAT: *** 2021-05-16T20:02:16.6832319Z COVERALLS_TOKEN: 2021-05-16T20:02:16.6832787Z continue-on-error: true 2021-05-16T20:02:16.6833306Z VDIFFR_RUN_TESTS: 2021-05-16T20:02:16.6833740Z ##[endgroup] 2021-05-16T20:02:17.3817403Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive add-apt-repository -y ppa:cran/travis 2021-05-16T20:02:19.4390824Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-05-16T20:02:19.4413790Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease [114 kB] 2021-05-16T20:02:19.4415927Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease [101 kB] 2021-05-16T20:02:19.4585416Z Get:4 http://security.ubuntu.com/ubuntu focal-security InRelease [109 kB] 2021-05-16T20:02:19.5249508Z Hit:5 https://download.mono-project.com/repo/ubuntu stable-focal InRelease 2021-05-16T20:02:19.5807282Z Hit:6 http://ppa.launchpad.net/apt-fast/stable/ubuntu focal InRelease 2021-05-16T20:02:19.7148784Z Get:7 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease [10.5 kB] 2021-05-16T20:02:19.7386806Z Get:8 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease [18.0 kB] 2021-05-16T20:02:19.7581710Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 Packages [983 kB] 2021-05-16T20:02:19.7842645Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main Translation-en [222 kB] 2021-05-16T20:02:19.7862780Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 c-n-f Metadata [13.3 kB] 2021-05-16T20:02:19.7864658Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted amd64 Packages [226 kB] 2021-05-16T20:02:19.7924669Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted Translation-en [33.3 kB] 2021-05-16T20:02:19.7927814Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 Packages [774 kB] 2021-05-16T20:02:19.8029479Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe Translation-en [166 kB] 2021-05-16T20:02:19.8047907Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 c-n-f Metadata [17.4 kB] 2021-05-16T20:02:19.9773823Z Get:17 http://security.ubuntu.com/ubuntu focal-security/main amd64 Packages [655 kB] 2021-05-16T20:02:19.9811999Z Hit:18 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-05-16T20:02:20.0387651Z Get:19 http://security.ubuntu.com/ubuntu focal-security/main Translation-en [131 kB] 2021-05-16T20:02:20.0414760Z Get:20 http://security.ubuntu.com/ubuntu focal-security/main amd64 c-n-f Metadata [7508 B] 2021-05-16T20:02:20.0416149Z Get:21 http://security.ubuntu.com/ubuntu focal-security/restricted amd64 Packages [203 kB] 2021-05-16T20:02:20.0442090Z Get:22 http://security.ubuntu.com/ubuntu focal-security/restricted Translation-en [29.7 kB] 2021-05-16T20:02:20.0450588Z Get:23 http://security.ubuntu.com/ubuntu focal-security/universe amd64 Packages [565 kB] 2021-05-16T20:02:20.0574855Z Get:24 http://security.ubuntu.com/ubuntu focal-security/universe amd64 c-n-f Metadata [11.0 kB] 2021-05-16T20:02:20.3614775Z Get:25 https://packages.microsoft.com/ubuntu/20.04/prod focal/main amd64 Packages [73.2 kB] 2021-05-16T20:02:28.6181839Z Fetched 4463 kB in 1s (4221 kB/s) 2021-05-16T20:02:29.3415875Z Reading package lists... 2021-05-16T20:02:29.3643671Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get update -y -qq 2021-05-16T20:02:31.0843974Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get install -y gdebi-core qpdf devscripts 2021-05-16T20:02:31.1463605Z Reading package lists... 2021-05-16T20:02:31.2909837Z Building dependency tree... 2021-05-16T20:02:31.2926122Z Reading state information... 2021-05-16T20:02:31.4304764Z The following additional packages will be installed: 2021-05-16T20:02:31.4306438Z dctrl-tools diffstat dput gettext intltool-debian libapt-pkg-perl 2021-05-16T20:02:31.4312501Z libarchive-zip-perl libarray-intspan-perl libasync-mergepoint-perl 2021-05-16T20:02:31.4314086Z libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl 2021-05-16T20:02:31.4315741Z libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl 2021-05-16T20:02:31.4317293Z libcommon-sense-perl libconst-fast-perl libcontextual-return-perl 2021-05-16T20:02:31.4318669Z libcpanel-json-xs-perl libcroco3 libdata-optlist-perl 2021-05-16T20:02:31.4320132Z libdevel-callchecker-perl libdevel-size-perl libdigest-bubblebabble-perl 2021-05-16T20:02:31.4321747Z libdigest-hmac-perl libdistro-info-perl libdynaloader-functions-perl 2021-05-16T20:02:31.4323208Z libemail-valid-perl libexporter-tiny-perl libfile-chdir-perl 2021-05-16T20:02:31.4324561Z libfile-find-rule-perl libfile-homedir-perl libfile-which-perl 2021-05-16T20:02:31.4325998Z libfont-ttf-perl libfuture-perl libgetopt-long-descriptive-perl 2021-05-16T20:02:31.4327450Z libgit-wrapper-perl libgitlab-api-v4-perl libhash-fieldhash-perl 2021-05-16T20:02:31.4329043Z libhttp-tiny-multipart-perl libimport-into-perl libio-async-loop-epoll-perl 2021-05-16T20:02:31.4330607Z libio-async-perl libio-prompter-perl libio-pty-perl libio-string-perl 2021-05-16T20:02:31.4331936Z libipc-run-perl libjson-maybexs-perl libjson-perl libjson-xs-perl 2021-05-16T20:02:31.4333764Z liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl 2021-05-16T20:02:31.4335084Z liblist-someutils-perl liblist-someutils-xs-perl 2021-05-16T20:02:31.4336622Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-05-16T20:02:31.4338285Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-05-16T20:02:31.4339718Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-05-16T20:02:31.4341012Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-05-16T20:02:31.4342314Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-05-16T20:02:31.4343817Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-05-16T20:02:31.4345422Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-05-16T20:02:31.4346896Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-05-16T20:02:31.4348289Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-05-16T20:02:31.4349804Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-05-16T20:02:31.4351287Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-05-16T20:02:31.4352805Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-05-16T20:02:31.4354342Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-05-16T20:02:31.4355839Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-05-16T20:02:31.4357458Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-05-16T20:02:31.4359054Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-05-16T20:02:31.4360518Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-05-16T20:02:31.4361942Z libtype-tiny-perl libtype-tiny-xs-perl libtypes-serialiser-perl 2021-05-16T20:02:31.4363430Z libunicode-utf8-perl libvariable-magic-perl libwant-perl libxml-writer-perl 2021-05-16T20:02:31.4364804Z libyaml-libyaml-perl licensecheck lintian patchutils python3-gpg 2021-05-16T20:02:31.4366407Z python3-magic python3-unidiff python3-xdg t1utils wdiff 2021-05-16T20:02:31.4367096Z Suggested packages: 2021-05-16T20:02:31.4367844Z debtags adequate autopkgtest bls-standalone bsd-mailx | mailx 2021-05-16T20:02:31.4368895Z check-all-the-things cvs-buildpackage debhelper devscripts-el diffoscope 2021-05-16T20:02:31.4370007Z disorderfs dose-extra duck faketime gnuplot how-can-i-help libdbd-pg-perl 2021-05-16T20:02:31.4371158Z libnet-smtps-perl libterm-size-perl libyaml-syck-perl mozilla-devscripts 2021-05-16T20:02:31.4372392Z mutt piuparts quilt ratt reprotest svn-buildpackage w3m debian-keyring 2021-05-16T20:02:31.4373445Z equivs libsoap-lite-perl python3-paramiko mini-dinstall gettext-doc 2021-05-16T20:02:31.4374508Z autopoint libasprintf-dev libgettextpo-dev libossp-uuid-perl 2021-05-16T20:02:31.4375703Z libscalar-number-perl libbareword-filehandles-perl libindirect-perl 2021-05-16T20:02:31.4377154Z libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl 2021-05-16T20:02:31.4378360Z binutils-multiarch libtext-template-perl wdiff-doc 2021-05-16T20:02:31.9012376Z The following NEW packages will be installed: 2021-05-16T20:02:31.9017018Z dctrl-tools devscripts diffstat dput gdebi-core gettext intltool-debian 2021-05-16T20:02:31.9018611Z libapt-pkg-perl libarchive-zip-perl libarray-intspan-perl 2021-05-16T20:02:31.9026458Z libasync-mergepoint-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl 2021-05-16T20:02:31.9028347Z libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl 2021-05-16T20:02:31.9029817Z libclone-perl libcommon-sense-perl libconst-fast-perl 2021-05-16T20:02:31.9031108Z libcontextual-return-perl libcpanel-json-xs-perl libcroco3 2021-05-16T20:02:31.9032542Z libdata-optlist-perl libdevel-callchecker-perl libdevel-size-perl 2021-05-16T20:02:31.9034063Z libdigest-bubblebabble-perl libdigest-hmac-perl libdistro-info-perl 2021-05-16T20:02:31.9035664Z libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl 2021-05-16T20:02:31.9037181Z libfile-chdir-perl libfile-find-rule-perl libfile-homedir-perl 2021-05-16T20:02:31.9038404Z libfile-which-perl libfont-ttf-perl libfuture-perl 2021-05-16T20:02:31.9039845Z libgetopt-long-descriptive-perl libgit-wrapper-perl libgitlab-api-v4-perl 2021-05-16T20:02:31.9041519Z libhash-fieldhash-perl libhttp-tiny-multipart-perl libimport-into-perl 2021-05-16T20:02:31.9043035Z libio-async-loop-epoll-perl libio-async-perl libio-prompter-perl 2021-05-16T20:02:31.9044455Z libio-pty-perl libio-string-perl libipc-run-perl libjson-maybexs-perl 2021-05-16T20:02:31.9045822Z libjson-perl libjson-xs-perl liblinux-epoll-perl liblist-compare-perl 2021-05-16T20:02:31.9047323Z liblist-moreutils-perl liblist-someutils-perl liblist-someutils-xs-perl 2021-05-16T20:02:31.9049034Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-05-16T20:02:31.9050712Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-05-16T20:02:31.9052157Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-05-16T20:02:31.9053621Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-05-16T20:02:31.9054949Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-05-16T20:02:31.9056434Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-05-16T20:02:31.9058079Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-05-16T20:02:31.9059537Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-05-16T20:02:31.9060946Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-05-16T20:02:31.9062451Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-05-16T20:02:31.9067967Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-05-16T20:02:31.9069507Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-05-16T20:02:31.9071456Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-05-16T20:02:31.9072982Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-05-16T20:02:31.9074597Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-05-16T20:02:31.9076218Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-05-16T20:02:31.9077686Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-05-16T20:02:31.9079111Z libtype-tiny-perl libtype-tiny-xs-perl libtypes-serialiser-perl 2021-05-16T20:02:31.9080608Z libunicode-utf8-perl libvariable-magic-perl libwant-perl libxml-writer-perl 2021-05-16T20:02:31.9081971Z libyaml-libyaml-perl licensecheck lintian patchutils python3-gpg 2021-05-16T20:02:31.9083114Z python3-magic python3-unidiff python3-xdg qpdf t1utils wdiff 2021-05-16T20:02:31.9247165Z 0 upgraded, 130 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:02:31.9248093Z Need to get 8648 kB of archives. 2021-05-16T20:02:31.9248799Z After this operation, 32.3 MB of additional disk space will be used. 2021-05-16T20:02:31.9255999Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dctrl-tools amd64 2.24-3 [61.5 kB] 2021-05-16T20:02:31.9278607Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-which-perl all 1.23-1 [13.8 kB] 2021-05-16T20:02:31.9283766Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-homedir-perl all 1.004-1 [37.3 kB] 2021-05-16T20:02:31.9289055Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-pty-perl amd64 1:1.12-1 [32.4 kB] 2021-05-16T20:02:31.9294799Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libipc-run-perl all 20180523.0-2 [89.7 kB] 2021-05-16T20:02:31.9304080Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-method-modifiers-perl all 2.13-1 [16.2 kB] 2021-05-16T20:02:31.9309622Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-op-check-perl amd64 0.22-1build2 [10.2 kB] 2021-05-16T20:02:31.9315753Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdynaloader-functions-perl all 0.003-1 [11.9 kB] 2021-05-16T20:02:31.9320587Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-callchecker-perl amd64 0.008-1ubuntu1 [14.5 kB] 2021-05-16T20:02:31.9325741Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-classify-perl amd64 0.015-1build2 [21.1 kB] 2021-05-16T20:02:31.9331388Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-runtime-perl all 0.016-1 [16.2 kB] 2021-05-16T20:02:31.9337090Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimport-into-perl all 1.002005-1 [11.0 kB] 2021-05-16T20:02:31.9340915Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librole-tiny-perl all 2.001004-1 [16.5 kB] 2021-05-16T20:02:31.9346183Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstrictures-perl all 2.000006-1 [16.3 kB] 2021-05-16T20:02:31.9352002Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-quote-perl all 2.006006-1 [19.5 kB] 2021-05-16T20:02:31.9357888Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoo-perl all 2.003006-1 [46.3 kB] 2021-05-16T20:02:31.9365242Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 patchutils amd64 0.3.4-2 [71.1 kB] 2021-05-16T20:02:31.9366862Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 wdiff amd64 1.2.2-2build1 [29.8 kB] 2021-05-16T20:02:31.9384137Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 devscripts amd64 2.20.2ubuntu2 [940 kB] 2021-05-16T20:02:31.9484026Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 diffstat amd64 1.63-1 [27.2 kB] 2021-05-16T20:02:31.9495322Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-gpg amd64 1.13.1-7ubuntu2 [165 kB] 2021-05-16T20:02:31.9501030Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dput all 1.0.3ubuntu1 [42.3 kB] 2021-05-16T20:02:31.9507671Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdebi-core all 0.9.5.7+nmu3 [116 kB] 2021-05-16T20:02:31.9517590Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB] 2021-05-16T20:02:31.9526972Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gettext amd64 0.19.8.1-10build1 [895 kB] 2021-05-16T20:02:31.9600900Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] 2021-05-16T20:02:31.9607792Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libapt-pkg-perl amd64 0.1.36build3 [68.5 kB] 2021-05-16T20:02:31.9622025Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-zip-perl all 1.67-2 [90.5 kB] 2021-05-16T20:02:31.9627259Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarray-intspan-perl all 2.003-1 [23.3 kB] 2021-05-16T20:02:31.9632884Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasync-mergepoint-perl all 0.04-2 [10.2 kB] 2021-05-16T20:02:31.9637259Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-implementation-perl all 0.09-1 [12.2 kB] 2021-05-16T20:02:31.9640549Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [6784 B] 2021-05-16T20:02:31.9644066Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvariable-magic-perl amd64 0.62-1build2 [34.4 kB] 2021-05-16T20:02:31.9648185Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-endofscope-perl all 0.24-1 [16.8 kB] 2021-05-16T20:02:31.9652582Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcapture-tiny-perl all 0.48-1 [20.4 kB] 2021-05-16T20:02:31.9657183Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-xsaccessor-perl amd64 1.19-3build3 [33.6 kB] 2021-05-16T20:02:31.9666128Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclone-perl amd64 0.43-2 [11.0 kB] 2021-05-16T20:02:31.9667600Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcommon-sense-perl amd64 3.74-2build6 [20.1 kB] 2021-05-16T20:02:31.9669120Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-util-perl amd64 1.07-3build5 [19.7 kB] 2021-05-16T20:02:31.9689006Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-install-perl all 0.928-1 [10.5 kB] 2021-05-16T20:02:31.9696780Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdata-optlist-perl all 0.110-1 [9956 B] 2021-05-16T20:02:31.9698298Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-perl all 0.987-1 [44.9 kB] 2021-05-16T20:02:31.9705411Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libconst-fast-perl all 0.014-1 [7958 B] 2021-05-16T20:02:31.9706985Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwant-perl amd64 0.29-1build4 [24.2 kB] 2021-05-16T20:02:31.9713275Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcontextual-return-perl all 0.004014-2 [53.1 kB] 2021-05-16T20:02:31.9720152Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcpanel-json-xs-perl amd64 4.19-1build1 [109 kB] 2021-05-16T20:02:31.9734972Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-bubblebabble-perl all 0.02-2 [7908 B] 2021-05-16T20:02:31.9736549Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.3 kB] 2021-05-16T20:02:31.9783814Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdistro-info-perl all 0.23ubuntu1 [4668 B] 2021-05-16T20:02:31.9785462Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-ip-perl all 1.26-2 [27.4 kB] 2021-05-16T20:02:31.9786812Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-perl all 1.22-1 [336 kB] 2021-05-16T20:02:31.9788247Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-domain-tld-perl all 1.75-1 [29.1 kB] 2021-05-16T20:02:31.9789935Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libemail-valid-perl all 1.202-1 [16.3 kB] 2021-05-16T20:02:31.9798959Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libexporter-tiny-perl all 1.002001-1 [35.5 kB] 2021-05-16T20:02:31.9800457Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-chdir-perl all 0.1008-1 [11.7 kB] 2021-05-16T20:02:31.9801917Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-compare-perl all 0.03-1 [7318 B] 2021-05-16T20:02:31.9803356Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-glob-perl all 0.10-1 [7554 B] 2021-05-16T20:02:31.9804786Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-find-rule-perl all 0.34-1 [28.3 kB] 2021-05-16T20:02:31.9843003Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-string-perl all 1.08-3 [11.1 kB] 2021-05-16T20:02:31.9844446Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfont-ttf-perl all 1.06-1 [313 kB] 2021-05-16T20:02:31.9877230Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfuture-perl all 0.43-1 [77.8 kB] 2021-05-16T20:02:31.9884625Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-validate-perl amd64 1.29-3 [52.7 kB] 2021-05-16T20:02:31.9892614Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgetopt-long-descriptive-perl all 0.104-1 [24.6 kB] 2021-05-16T20:02:31.9903675Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-versions-perl all 1.62-1 [9294 B] 2021-05-16T20:02:31.9905481Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgit-wrapper-perl all 0.048-1 [29.9 kB] 2021-05-16T20:02:31.9907019Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhttp-tiny-multipart-perl all 0.08-1 [8488 B] 2021-05-16T20:02:31.9908554Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-prompter-perl all 0.004015-1 [58.1 kB] 2021-05-16T20:02:31.9914330Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-perl all 4.02000-2 [80.9 kB] 2021-05-16T20:02:31.9920274Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-perl all 1.708-1 [67.8 kB] 2021-05-16T20:02:31.9927595Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-adapter-screen-perl all 0.140-1 [12.1 kB] 2021-05-16T20:02:31.9936413Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-perl all 0.38-1 [19.1 kB] 2021-05-16T20:02:31.9938040Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-identify-perl amd64 0.14-1build2 [10.7 kB] 2021-05-16T20:02:31.9947846Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-name-perl amd64 0.26-1 [11.5 kB] 2021-05-16T20:02:31.9949341Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnamespace-clean-perl all 0.27-1 [13.6 kB] 2021-05-16T20:02:31.9950823Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-tiny-perl all 0.108-1 [42.6 kB] 2021-05-16T20:02:31.9955681Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-perl all 1.008001-2 [304 kB] 2021-05-16T20:02:31.9977686Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgitlab-api-v4-perl all 0.25-1 [83.8 kB] 2021-05-16T20:02:31.9986326Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhash-fieldhash-perl amd64 0.15-1build2 [16.9 kB] 2021-05-16T20:02:31.9994754Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstruct-dumb-perl all 0.09-1 [10.5 kB] 2021-05-16T20:02:31.9996170Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-perl all 0.75-1 [254 kB] 2021-05-16T20:02:32.0014635Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.0 kB] 2021-05-16T20:02:32.0024644Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-loop-epoll-perl all 0.20-1 [10.4 kB] 2021-05-16T20:02:32.0043542Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtypes-serialiser-perl all 1.0-1 [12.1 kB] 2021-05-16T20:02:32.0045609Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-xs-perl amd64 4.020-1build1 [83.7 kB] 2021-05-16T20:02:32.0056869Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-maybexs-perl all 1.004000-1 [11.0 kB] 2021-05-16T20:02:32.0058380Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-compare-perl all 0.53-1 [65.6 kB] 2021-05-16T20:02:32.0059894Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-moreutils-perl amd64 0.416-1build5 [55.5 kB] 2021-05-16T20:02:32.0072794Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-perl all 0.58-1 [29.7 kB] 2021-05-16T20:02:32.0074434Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-xs-perl amd64 0.58-2 [32.5 kB] 2021-05-16T20:02:32.0076063Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-aliases-perl all 0.001006-1 [7176 B] 2021-05-16T20:02:32.0090715Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libobject-id-perl all 0.1.2-2ubuntu1 [15.9 kB] 2021-05-16T20:02:32.0099865Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-struct-perl all 0.017-1 [23.4 kB] 2021-05-16T20:02:32.0101572Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-sec-perl amd64 1.15-1 [44.6 kB] 2021-05-16T20:02:32.0103093Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-libidn-perl amd64 0.12.ds-3build2 [17.3 kB] 2021-05-16T20:02:32.0104575Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-range-perl all 0.12-1 [8556 B] 2021-05-16T20:02:32.0106116Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-xs-perl amd64 0.29-1build1 [18.4 kB] 2021-05-16T20:02:32.0135650Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-iterator-rule-perl all 1.014-1 [49.5 kB] 2021-05-16T20:02:32.0137336Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperl4-corelibs-perl all 0.004-2 [37.4 kB] 2021-05-16T20:02:32.0138850Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperlio-gzip-perl amd64 0.19-1build5 [14.6 kB] 2021-05-16T20:02:32.0140340Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpod-constants-perl all 0.19-1 [16.0 kB] 2021-05-16T20:02:32.0141737Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqpdf26 amd64 9.1.1-1build1 [421 kB] 2021-05-16T20:02:32.0190554Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libre-engine-re2-perl amd64 0.13-5 [16.2 kB] 2021-05-16T20:02:32.0220669Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libreadonly-perl all 2.050-2 [19.9 kB] 2021-05-16T20:02:32.0225120Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-perl all 0.204-1 [15.0 kB] 2021-05-16T20:02:32.0242087Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-xs-perl amd64 0.117-1build2 [12.0 kB] 2021-05-16T20:02:32.0593415Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-license-perl all 3.2.0-1 [36.2 kB] 2021-05-16T20:02:32.0636530Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-perl all 0.2.12-1 [17.1 kB] 2021-05-16T20:02:32.0690720Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-decoder-perl amd64 4.011+ds-1build1 [102 kB] 2021-05-16T20:02:32.0772153Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-encoder-perl amd64 4.011+ds-1build1 [104 kB] 2021-05-16T20:02:32.0798923Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-perl all 4.011-1 [8604 B] 2021-05-16T20:02:32.0893476Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-key-perl amd64 1.33-2build2 [35.4 kB] 2021-05-16T20:02:32.0895663Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-copyright-perl all 0.003006-1 [9608 B] 2021-05-16T20:02:32.0897588Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-escape-perl all 2010.002-2 [17.6 kB] 2021-05-16T20:02:32.0899366Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-shellquote-perl all 1.04-1 [12.0 kB] 2021-05-16T20:02:32.0901062Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libterm-readkey-perl amd64 2.38-1build1 [24.6 kB] 2021-05-16T20:02:32.0902543Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-fatal-perl all 0.014-1 [11.1 kB] 2021-05-16T20:02:32.0903984Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-refcount-perl all 0.10-1 [11.4 kB] 2021-05-16T20:02:32.0905500Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-levenshtein-perl all 0.13-1 [9612 B] 2021-05-16T20:02:32.0906991Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-xs-perl amd64 0.016-1 [22.9 kB] 2021-05-16T20:02:32.0908494Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libunicode-utf8-perl amd64 0.62-1build1 [18.1 kB] 2021-05-16T20:02:32.0909960Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxml-writer-perl all 0.625-1 [24.9 kB] 2021-05-16T20:02:32.0911429Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [28.5 kB] 2021-05-16T20:02:32.0912848Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 licensecheck all 3.0.45-1 [23.9 kB] 2021-05-16T20:02:32.0914240Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-size-perl amd64 0.83-1build1 [20.0 kB] 2021-05-16T20:02:32.0915598Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 t1utils amd64 1.41-3 [56.1 kB] 2021-05-16T20:02:32.0922441Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 lintian all 2.62.0 [980 kB] 2021-05-16T20:02:32.1106919Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-unidiff all 0.5.5-2 [9180 B] 2021-05-16T20:02:32.1109700Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-xdg all 0.26-1ubuntu1 [36.1 kB] 2021-05-16T20:02:32.1116123Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qpdf amd64 9.1.1-1build1 [476 kB] 2021-05-16T20:02:32.1201904Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-magic all 2:0.4.15-3 [9376 B] 2021-05-16T20:02:32.8230281Z Fetched 8648 kB in 0s (41.0 MB/s) 2021-05-16T20:02:32.8953848Z Selecting previously unselected package dctrl-tools. 2021-05-16T20:02:32.9550013Z (Reading database ... 2021-05-16T20:02:32.9550758Z (Reading database ... 5% 2021-05-16T20:02:32.9551425Z (Reading database ... 10% 2021-05-16T20:02:32.9552282Z (Reading database ... 15% 2021-05-16T20:02:32.9552802Z (Reading database ... 20% 2021-05-16T20:02:32.9553372Z (Reading database ... 25% 2021-05-16T20:02:32.9553902Z (Reading database ... 30% 2021-05-16T20:02:32.9554363Z (Reading database ... 35% 2021-05-16T20:02:32.9554867Z (Reading database ... 40% 2021-05-16T20:02:32.9555340Z (Reading database ... 45% 2021-05-16T20:02:32.9555820Z (Reading database ... 50% 2021-05-16T20:02:33.4124905Z (Reading database ... 55% 2021-05-16T20:02:34.1768180Z (Reading database ... 60% 2021-05-16T20:02:34.6927465Z (Reading database ... 65% 2021-05-16T20:02:35.4206030Z (Reading database ... 70% 2021-05-16T20:02:36.1780419Z (Reading database ... 75% 2021-05-16T20:02:37.0940588Z (Reading database ... 80% 2021-05-16T20:02:38.0617236Z (Reading database ... 85% 2021-05-16T20:02:39.6197217Z (Reading database ... 90% 2021-05-16T20:02:39.8168765Z (Reading database ... 95% 2021-05-16T20:02:39.8169671Z (Reading database ... 100% 2021-05-16T20:02:39.8170532Z (Reading database ... 254809 files and directories currently installed.) 2021-05-16T20:02:39.8295092Z Preparing to unpack .../000-dctrl-tools_2.24-3_amd64.deb ... 2021-05-16T20:02:39.8486122Z Unpacking dctrl-tools (2.24-3) ... 2021-05-16T20:02:39.8934470Z Selecting previously unselected package libfile-which-perl. 2021-05-16T20:02:39.9160550Z Preparing to unpack .../001-libfile-which-perl_1.23-1_all.deb ... 2021-05-16T20:02:39.9169622Z Unpacking libfile-which-perl (1.23-1) ... 2021-05-16T20:02:39.9453596Z Selecting previously unselected package libfile-homedir-perl. 2021-05-16T20:02:39.9657748Z Preparing to unpack .../002-libfile-homedir-perl_1.004-1_all.deb ... 2021-05-16T20:02:39.9665403Z Unpacking libfile-homedir-perl (1.004-1) ... 2021-05-16T20:02:40.0013547Z Selecting previously unselected package libio-pty-perl. 2021-05-16T20:02:40.0212326Z Preparing to unpack .../003-libio-pty-perl_1%3a1.12-1_amd64.deb ... 2021-05-16T20:02:40.0220787Z Unpacking libio-pty-perl (1:1.12-1) ... 2021-05-16T20:02:40.0545033Z Selecting previously unselected package libipc-run-perl. 2021-05-16T20:02:40.0763996Z Preparing to unpack .../004-libipc-run-perl_20180523.0-2_all.deb ... 2021-05-16T20:02:40.0777800Z Unpacking libipc-run-perl (20180523.0-2) ... 2021-05-16T20:02:40.1094135Z Selecting previously unselected package libclass-method-modifiers-perl. 2021-05-16T20:02:40.1358294Z Preparing to unpack .../005-libclass-method-modifiers-perl_2.13-1_all.deb ... 2021-05-16T20:02:40.1371222Z Unpacking libclass-method-modifiers-perl (2.13-1) ... 2021-05-16T20:02:40.1556316Z Selecting previously unselected package libb-hooks-op-check-perl. 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2021-05-16T20:03:12.2442508Z [command]sudo apt-get install -y texinfo 2021-05-16T20:03:12.4088641Z Reading package lists... 2021-05-16T20:03:12.5523749Z Building dependency tree... 2021-05-16T20:03:12.5541418Z Reading state information... 2021-05-16T20:03:12.7463453Z texinfo is already the newest version (6.7.0.dfsg.2-5). 2021-05-16T20:03:12.7464746Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:03:13.2875038Z [command]sh /home/runner/work/_temp/install-unx.sh 2021-05-16T20:03:13.3345169Z --2021-05-16 20:03:13-- https://yihui.org/tinytex/TinyTeX-1.tar.gz 2021-05-16T20:03:13.3498951Z Resolving yihui.org (yihui.org)... 76.223.126.88 2021-05-16T20:03:13.3576794Z Connecting to yihui.org (yihui.org)|76.223.126.88|:443... connected. 2021-05-16T20:03:13.3848094Z HTTP request sent, awaiting response... 301 Moved Permanently 2021-05-16T20:03:13.3850047Z Location: https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu [following] 2021-05-16T20:03:13.3851972Z --2021-05-16 20:03:13-- https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu 2021-05-16T20:03:13.4249310Z Resolving ci.appveyor.com (ci.appveyor.com)... 138.91.141.243 2021-05-16T20:03:13.4937339Z Connecting to ci.appveyor.com (ci.appveyor.com)|138.91.141.243|:443... connected. 2021-05-16T20:03:13.7505742Z HTTP request sent, awaiting response... 302 Found 2021-05-16T20:03:13.7509118Z Location: https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1549/grr7rkdr54m0yum8/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=SyfF0y%2Fsh8U7HPqMbsKaWPSQRXzT%2B9WGXVi8BUeNKVM%3D&st=2021-05-16T20%3A02%3A13Z&se=2021-05-16T20%3A08%3A13Z&sp=r [following] 2021-05-16T20:03:13.7513346Z --2021-05-16 20:03:13-- https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1549/grr7rkdr54m0yum8/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=SyfF0y%2Fsh8U7HPqMbsKaWPSQRXzT%2B9WGXVi8BUeNKVM%3D&st=2021-05-16T20%3A02%3A13Z&se=2021-05-16T20%3A08%3A13Z&sp=r 2021-05-16T20:03:13.7857383Z Resolving appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)... 52.239.228.196 2021-05-16T20:03:13.8446164Z Connecting to appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)|52.239.228.196|:443... connected. 2021-05-16T20:03:14.0785367Z HTTP request sent, awaiting response... 200 OK 2021-05-16T20:03:14.0786803Z Length: 67310420 (64M) [application/octet-stream] 2021-05-16T20:03:14.0788669Z Saving to: ‘TinyTeX.tar.gz’ 2021-05-16T20:03:14.6686572Z 2021-05-16T20:03:16.1696275Z 0K ........ ........ ........ ........ 49% 15.9M 2s 2021-05-16T20:03:17.2921398Z 32768K ........ ........ ........ ........ 99% 28.0M 0s 2021-05-16T20:03:17.2924654Z 65536K 100% 3.16M=3.2s 2021-05-16T20:03:17.2925068Z 2021-05-16T20:03:17.2926445Z 2021-05-16 20:03:17 (20.0 MB/s) - ‘TinyTeX.tar.gz’ saved [67310420/67310420] 2021-05-16T20:03:17.2926883Z 2021-05-16T20:03:19.2532022Z tlmgr: setting option sys_bin to /home/runner/bin. 2021-05-16T20:03:19.2533027Z tlmgr: updating /home/runner/.TinyTeX/tlpkg/texlive.tlpdb 2021-05-16T20:03:19.5139921Z ##[group]Run tlmgr update --self 2021-05-16T20:03:19.5140481Z tlmgr update --self 2021-05-16T20:03:19.5141296Z tlmgr install filecontents upquote courier courier-scaled biber biblatex collection-luatex ae thumbpdf grfext 2021-05-16T20:03:19.5142083Z tlmgr update --all 2021-05-16T20:03:19.5185572Z shell: /usr/bin/bash -e {0} 2021-05-16T20:03:19.5185935Z env: 2021-05-16T20:03:19.5186358Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:03:19.5186789Z TIC_DEPLOY_KEY: 2021-05-16T20:03:19.5187559Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:03:19.5189264Z GITHUB_PAT: *** 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--no-error-if-no-engine=luajithbtex,luajittex,mfluajit --status-file=/tmp/ln7LvTquHj/arFacPKYUt. 2021-05-16T20:03:28.5256428Z OK: optex.fmt/luatex 2021-05-16T20:03:28.5257601Z tlmgr: package log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr.log 2021-05-16T20:03:28.5258974Z tlmgr: command log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr-commands.log 2021-05-16T20:03:29.6881369Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-05-16T20:03:29.6882916Z tlmgr: no updates available 2021-05-16T20:03:29.7861655Z ##[group]Run r-lib/actions/setup-pandoc@master 2021-05-16T20:03:29.7862138Z with: 2021-05-16T20:03:29.7862507Z pandoc-version: 2.7.3 2021-05-16T20:03:29.7862884Z env: 2021-05-16T20:03:29.7863298Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:03:29.7863729Z TIC_DEPLOY_KEY: 2021-05-16T20:03:29.7864500Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:03:29.7866160Z GITHUB_PAT: *** 2021-05-16T20:03:29.7866546Z COVERALLS_TOKEN: 2021-05-16T20:03:29.7866993Z continue-on-error: true 2021-05-16T20:03:29.7867443Z VDIFFR_RUN_TESTS: 2021-05-16T20:03:29.7867890Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:03:29.7868325Z TZ: UTC 2021-05-16T20:03:29.7868693Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:03:29.7869071Z NOT_CRAN: true 2021-05-16T20:03:29.7869427Z ##[endgroup] 2021-05-16T20:03:30.1899734Z [command]sudo apt-get install -y gdebi-core 2021-05-16T20:03:30.2536200Z Reading package lists... 2021-05-16T20:03:30.4016498Z Building dependency tree... 2021-05-16T20:03:30.4030337Z Reading state information... 2021-05-16T20:03:30.6081651Z gdebi-core is already the newest version (0.9.5.7+nmu3). 2021-05-16T20:03:30.6087738Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:03:30.6106656Z [command]sudo gdebi --non-interactive /home/runner/work/_temp/pandoc-2.7.3-1-amd64.deb 2021-05-16T20:03:30.7203755Z 2021-05-16T20:03:30.7370451Z 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2021-05-16T20:03:31.1473734Z 2021-05-16T20:03:31.1474246Z Reading state information... 65% 2021-05-16T20:03:31.1510925Z 2021-05-16T20:03:31.1511412Z Reading state information... 67% 2021-05-16T20:03:31.1548091Z 2021-05-16T20:03:31.1548825Z Reading state information... 69% 2021-05-16T20:03:31.1596598Z 2021-05-16T20:03:31.1597128Z Reading state information... 71% 2021-05-16T20:03:31.1630454Z 2021-05-16T20:03:31.1630947Z Reading state information... 73% 2021-05-16T20:03:31.1666954Z 2021-05-16T20:03:31.1667456Z Reading state information... 75% 2021-05-16T20:03:31.1715768Z 2021-05-16T20:03:31.1716288Z Reading state information... 77% 2021-05-16T20:03:31.1752627Z 2021-05-16T20:03:31.1753144Z Reading state information... 79% 2021-05-16T20:03:31.1790611Z 2021-05-16T20:03:31.1791126Z Reading state information... 81% 2021-05-16T20:03:31.1828083Z 2021-05-16T20:03:31.1828572Z Reading state information... 83% 2021-05-16T20:03:31.1865376Z 2021-05-16T20:03:31.1865864Z Reading state information... 85% 2021-05-16T20:03:31.1902164Z 2021-05-16T20:03:31.1902653Z Reading state information... 87% 2021-05-16T20:03:31.1938271Z 2021-05-16T20:03:31.1938761Z Reading state information... 89% 2021-05-16T20:03:31.1971908Z 2021-05-16T20:03:31.1972576Z Reading state information... 91% 2021-05-16T20:03:31.2007733Z 2021-05-16T20:03:31.2008239Z Reading state information... 93% 2021-05-16T20:03:31.2043375Z 2021-05-16T20:03:31.2043878Z Reading state information... 95% 2021-05-16T20:03:31.2081157Z 2021-05-16T20:03:31.2081676Z Reading state information... 97% 2021-05-16T20:03:31.2117330Z 2021-05-16T20:03:31.2117830Z Reading state information... 99% 2021-05-16T20:03:31.4814070Z Selecting previously unselected package pandoc. 2021-05-16T20:03:31.5840373Z (Reading database ... 261973 files and directories currently installed.) 2021-05-16T20:03:31.5944671Z Preparing to unpack .../_temp/pandoc-2.7.3-1-amd64.deb ... 2021-05-16T20:03:31.5955070Z Unpacking pandoc (2.7.3-1) ... 2021-05-16T20:03:33.6163788Z Setting up pandoc (2.7.3-1) ... 2021-05-16T20:03:33.6185240Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T20:03:34.3091326Z 2021-05-16T20:03:34.3092409Z 2021-05-16T20:03:34.3093129Z Reading state information... Done 2021-05-16T20:03:34.3405845Z ##[group]Run git config user.name adigherman 2021-05-16T20:03:34.3406488Z git config user.name adigherman 2021-05-16T20:03:34.3407015Z git config user.email adig@jhu.edu 2021-05-16T20:03:34.3446828Z shell: /usr/bin/bash -e {0} 2021-05-16T20:03:34.3447221Z env: 2021-05-16T20:03:34.3447656Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:03:34.3448112Z TIC_DEPLOY_KEY: 2021-05-16T20:03:34.3448878Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:03:34.3450489Z GITHUB_PAT: *** 2021-05-16T20:03:34.3450923Z COVERALLS_TOKEN: 2021-05-16T20:03:34.3451389Z continue-on-error: true 2021-05-16T20:03:34.3451851Z VDIFFR_RUN_TESTS: 2021-05-16T20:03:34.3452833Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:03:34.3453275Z TZ: UTC 2021-05-16T20:03:34.3453642Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:03:34.3454046Z NOT_CRAN: true 2021-05-16T20:03:34.3454414Z ##[endgroup] 2021-05-16T20:03:34.3685756Z ##[group]Run adigherman/actions/install-sysdeps-linux@master 2021-05-16T20:03:34.3686355Z env: 2021-05-16T20:03:34.3686772Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:03:34.3687210Z TIC_DEPLOY_KEY: 2021-05-16T20:03:34.3687963Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:03:34.3689563Z GITHUB_PAT: *** 2021-05-16T20:03:34.3689938Z COVERALLS_TOKEN: 2021-05-16T20:03:34.3690373Z continue-on-error: true 2021-05-16T20:03:34.3690815Z VDIFFR_RUN_TESTS: 2021-05-16T20:03:34.3691252Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:03:34.3691667Z TZ: UTC 2021-05-16T20:03:34.3692017Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:03:34.3692571Z NOT_CRAN: true 2021-05-16T20:03:34.3692909Z ##[endgroup] 2021-05-16T20:03:34.6731848Z Reading package lists... 2021-05-16T20:03:34.8094736Z Building dependency tree... 2021-05-16T20:03:34.8110140Z Reading state information... 2021-05-16T20:03:34.9356814Z The following additional packages will be installed: 2021-05-16T20:03:34.9360166Z cmake-data libjsoncpp1 librhash0 2021-05-16T20:03:34.9364762Z Suggested packages: 2021-05-16T20:03:34.9365544Z cmake-doc ninja-build 2021-05-16T20:03:34.9759324Z The following NEW packages will be installed: 2021-05-16T20:03:34.9763566Z cmake cmake-data libjsoncpp1 librhash0 2021-05-16T20:03:35.0034769Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:03:35.0035522Z Need to get 5470 kB of archives. 2021-05-16T20:03:35.0036217Z After this operation, 28.3 MB of additional disk space will be used. 2021-05-16T20:03:35.0037893Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake-data all 3.16.3-1ubuntu1 [1612 kB] 2021-05-16T20:03:35.0641843Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjsoncpp1 amd64 1.7.4-3.1ubuntu2 [75.6 kB] 2021-05-16T20:03:35.0733986Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librhash0 amd64 1.3.9-1 [113 kB] 2021-05-16T20:03:35.0840024Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake amd64 3.16.3-1ubuntu1 [3669 kB] 2021-05-16T20:03:35.5812566Z Fetched 5470 kB in 0s (24.5 MB/s) 2021-05-16T20:03:35.6174643Z Selecting previously unselected package cmake-data. 2021-05-16T20:03:35.6223329Z (Reading database ... 2021-05-16T20:03:35.6224032Z (Reading database ... 5% 2021-05-16T20:03:35.6224927Z (Reading database ... 10% 2021-05-16T20:03:35.6225437Z (Reading database ... 15% 2021-05-16T20:03:35.6225926Z (Reading database ... 20% 2021-05-16T20:03:35.6226399Z (Reading database ... 25% 2021-05-16T20:03:35.6227920Z (Reading database ... 30% 2021-05-16T20:03:35.6228390Z (Reading database ... 35% 2021-05-16T20:03:35.6228868Z (Reading database ... 40% 2021-05-16T20:03:35.6229307Z (Reading database ... 45% 2021-05-16T20:03:35.6229763Z (Reading database ... 50% 2021-05-16T20:03:35.6264642Z (Reading database ... 55% 2021-05-16T20:03:35.6298541Z (Reading database ... 60% 2021-05-16T20:03:35.6333057Z (Reading database ... 65% 2021-05-16T20:03:35.6444407Z (Reading database ... 70% 2021-05-16T20:03:35.6464505Z (Reading database ... 75% 2021-05-16T20:03:35.6794281Z (Reading database ... 80% 2021-05-16T20:03:35.7072301Z (Reading database ... 85% 2021-05-16T20:03:35.7208860Z (Reading database ... 90% 2021-05-16T20:03:35.7279572Z (Reading database ... 95% 2021-05-16T20:03:35.7280954Z (Reading database ... 100% 2021-05-16T20:03:35.7281876Z (Reading database ... 261980 files and directories currently installed.) 2021-05-16T20:03:35.7394467Z Preparing to unpack .../cmake-data_3.16.3-1ubuntu1_all.deb ... 2021-05-16T20:03:35.7757018Z Unpacking cmake-data (3.16.3-1ubuntu1) ... 2021-05-16T20:03:36.3494011Z Selecting previously unselected package libjsoncpp1:amd64. 2021-05-16T20:03:36.3716928Z Preparing to unpack .../libjsoncpp1_1.7.4-3.1ubuntu2_amd64.deb ... 2021-05-16T20:03:36.3731443Z Unpacking libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-05-16T20:03:36.4093987Z Selecting previously unselected package librhash0:amd64. 2021-05-16T20:03:36.4280877Z Preparing to unpack .../librhash0_1.3.9-1_amd64.deb ... 2021-05-16T20:03:36.4288864Z Unpacking librhash0:amd64 (1.3.9-1) ... 2021-05-16T20:03:36.4614516Z Selecting previously unselected package cmake. 2021-05-16T20:03:36.4826412Z Preparing to unpack .../cmake_3.16.3-1ubuntu1_amd64.deb ... 2021-05-16T20:03:36.4835671Z Unpacking cmake (3.16.3-1ubuntu1) ... 2021-05-16T20:03:36.8740693Z Setting up librhash0:amd64 (1.3.9-1) ... 2021-05-16T20:03:36.8758331Z Setting up cmake-data (3.16.3-1ubuntu1) ... 2021-05-16T20:03:36.9110374Z Setting up libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-05-16T20:03:36.9129765Z Setting up cmake (3.16.3-1ubuntu1) ... 2021-05-16T20:03:36.9150440Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T20:03:37.9387381Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:03:39.8695139Z Reading package lists... 2021-05-16T20:03:40.0085591Z Building dependency tree... 2021-05-16T20:03:40.0101699Z Reading state information... 2021-05-16T20:03:40.1503133Z Suggested packages: 2021-05-16T20:03:40.1506166Z libssh-doc 2021-05-16T20:03:40.1928033Z The following NEW packages will be installed: 2021-05-16T20:03:40.1929767Z libssh-dev 2021-05-16T20:03:40.2104091Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:03:40.2105074Z Need to get 219 kB of archives. 2021-05-16T20:03:40.2106268Z After this operation, 1127 kB of additional disk space will be used. 2021-05-16T20:03:40.2108083Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-dev amd64 0.9.3-2ubuntu2.1 [219 kB] 2021-05-16T20:03:40.5820949Z Fetched 219 kB in 0s (12.2 MB/s) 2021-05-16T20:03:40.6084466Z Selecting previously unselected package libssh-dev:amd64. 2021-05-16T20:03:40.6155099Z (Reading database ... 2021-05-16T20:03:40.6155794Z (Reading database ... 5% 2021-05-16T20:03:40.6156425Z (Reading database ... 10% 2021-05-16T20:03:40.6157055Z (Reading database ... 15% 2021-05-16T20:03:40.6157699Z (Reading database ... 20% 2021-05-16T20:03:40.6158326Z (Reading database ... 25% 2021-05-16T20:03:40.6158965Z (Reading database ... 30% 2021-05-16T20:03:40.6159599Z (Reading database ... 35% 2021-05-16T20:03:40.6160228Z (Reading database ... 40% 2021-05-16T20:03:40.6160850Z (Reading database ... 45% 2021-05-16T20:03:40.6161471Z (Reading database ... 50% 2021-05-16T20:03:40.6180969Z (Reading database ... 55% 2021-05-16T20:03:40.6215510Z (Reading database ... 60% 2021-05-16T20:03:40.6251331Z (Reading database ... 65% 2021-05-16T20:03:40.6362279Z (Reading database ... 70% 2021-05-16T20:03:40.6383248Z (Reading database ... 75% 2021-05-16T20:03:40.6711206Z (Reading database ... 80% 2021-05-16T20:03:40.6978092Z (Reading database ... 85% 2021-05-16T20:03:40.7103473Z (Reading database ... 90% 2021-05-16T20:03:40.7169830Z (Reading database ... 95% 2021-05-16T20:03:40.7171793Z (Reading database ... 100% 2021-05-16T20:03:40.7174188Z (Reading database ... 264764 files and directories currently installed.) 2021-05-16T20:03:40.7271745Z Preparing to unpack .../libssh-dev_0.9.3-2ubuntu2.1_amd64.deb ... 2021-05-16T20:03:40.7283594Z Unpacking libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-05-16T20:03:40.7990591Z Setting up libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-05-16T20:03:42.6351646Z Reading package lists... 2021-05-16T20:03:42.7771163Z Building dependency tree... 2021-05-16T20:03:42.7788470Z Reading state information... 2021-05-16T20:03:42.9577339Z The following NEW packages will be installed: 2021-05-16T20:03:42.9581083Z jags 2021-05-16T20:03:42.9813490Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:03:42.9814166Z Need to get 1562 kB of archives. 2021-05-16T20:03:42.9814856Z After this operation, 3615 kB of additional disk space will be used. 2021-05-16T20:03:42.9816660Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 jags amd64 4.3.0-3build1 [1562 kB] 2021-05-16T20:03:43.4192927Z Fetched 1562 kB in 0s (17.8 MB/s) 2021-05-16T20:03:43.4459388Z Selecting previously unselected package jags. 2021-05-16T20:03:43.4526498Z (Reading database ... 2021-05-16T20:03:43.4527440Z (Reading database ... 5% 2021-05-16T20:03:43.4528141Z (Reading database ... 10% 2021-05-16T20:03:43.4528764Z (Reading database ... 15% 2021-05-16T20:03:43.4529397Z (Reading database ... 20% 2021-05-16T20:03:43.4530012Z (Reading database ... 25% 2021-05-16T20:03:43.4530632Z (Reading database ... 30% 2021-05-16T20:03:43.4531236Z (Reading database ... 35% 2021-05-16T20:03:43.4531862Z (Reading database ... 40% 2021-05-16T20:03:43.4532690Z (Reading database ... 45% 2021-05-16T20:03:43.4533304Z (Reading database ... 50% 2021-05-16T20:03:43.4562878Z (Reading database ... 55% 2021-05-16T20:03:43.4596001Z (Reading database ... 60% 2021-05-16T20:03:43.4630879Z (Reading database ... 65% 2021-05-16T20:03:43.4741322Z (Reading database ... 70% 2021-05-16T20:03:43.4762531Z (Reading database ... 75% 2021-05-16T20:03:43.5092804Z (Reading database ... 80% 2021-05-16T20:03:43.5370445Z (Reading database ... 85% 2021-05-16T20:03:43.5498771Z (Reading database ... 90% 2021-05-16T20:03:43.5568477Z (Reading database ... 95% 2021-05-16T20:03:43.5569037Z (Reading database ... 100% 2021-05-16T20:03:43.5570044Z (Reading database ... 264783 files and directories currently installed.) 2021-05-16T20:03:43.5673919Z Preparing to unpack .../jags_4.3.0-3build1_amd64.deb ... 2021-05-16T20:03:43.5690943Z Unpacking jags (4.3.0-3build1) ... 2021-05-16T20:03:43.7121470Z Setting up jags (4.3.0-3build1) ... 2021-05-16T20:03:43.7273391Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T20:03:44.3897328Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:03:46.2408663Z Reading package lists... 2021-05-16T20:03:46.3911114Z Building dependency tree... 2021-05-16T20:03:46.3927531Z Reading state information... 2021-05-16T20:03:46.5277042Z The following additional packages will be installed: 2021-05-16T20:03:46.5279023Z libnode64 libuv1-dev 2021-05-16T20:03:46.5723287Z The following NEW packages will be installed: 2021-05-16T20:03:46.5725984Z libnode-dev libnode64 libuv1-dev 2021-05-16T20:03:46.5976039Z 0 upgraded, 3 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:03:46.5976838Z Need to get 6239 kB of archives. 2021-05-16T20:03:46.5977615Z After this operation, 24.9 MB of additional disk space will be used. 2021-05-16T20:03:46.5979592Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libuv1-dev amd64 1.34.2-1ubuntu1.1 [103 kB] 2021-05-16T20:03:46.6091458Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode64 amd64 10.19.0~dfsg-3ubuntu1 [5765 kB] 2021-05-16T20:03:46.8518347Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode-dev amd64 10.19.0~dfsg-3ubuntu1 [370 kB] 2021-05-16T20:03:47.2276934Z Fetched 6239 kB in 0s (21.7 MB/s) 2021-05-16T20:03:47.2542209Z Selecting previously unselected package libuv1-dev:amd64. 2021-05-16T20:03:47.2607842Z (Reading database ... 2021-05-16T20:03:47.2608787Z (Reading database ... 5% 2021-05-16T20:03:47.2609471Z (Reading database ... 10% 2021-05-16T20:03:47.2610161Z (Reading database ... 15% 2021-05-16T20:03:47.2681760Z (Reading database ... 20% 2021-05-16T20:03:47.2682509Z (Reading database ... 25% 2021-05-16T20:03:47.2683094Z (Reading database ... 30% 2021-05-16T20:03:47.2683651Z (Reading database ... 35% 2021-05-16T20:03:47.2684219Z (Reading database ... 40% 2021-05-16T20:03:47.2684784Z (Reading database ... 45% 2021-05-16T20:03:47.2685333Z (Reading database ... 50% 2021-05-16T20:03:47.2685953Z (Reading database ... 55% 2021-05-16T20:03:47.2686502Z (Reading database ... 60% 2021-05-16T20:03:47.2710053Z (Reading database ... 65% 2021-05-16T20:03:47.2818552Z (Reading database ... 70% 2021-05-16T20:03:47.2842715Z (Reading database ... 75% 2021-05-16T20:03:47.3158707Z (Reading database ... 80% 2021-05-16T20:03:47.3422183Z (Reading database ... 85% 2021-05-16T20:03:47.3545167Z (Reading database ... 90% 2021-05-16T20:03:47.3613036Z (Reading database ... 95% 2021-05-16T20:03:47.3613841Z (Reading database ... 100% 2021-05-16T20:03:47.3614804Z (Reading database ... 264923 files and directories currently installed.) 2021-05-16T20:03:47.3729766Z Preparing to unpack .../libuv1-dev_1.34.2-1ubuntu1.1_amd64.deb ... 2021-05-16T20:03:47.3739922Z Unpacking libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-05-16T20:03:47.4093850Z Selecting previously unselected package libnode64:amd64. 2021-05-16T20:03:47.4317931Z Preparing to unpack .../libnode64_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-05-16T20:03:47.4333716Z Unpacking libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-16T20:03:48.0335273Z Selecting previously unselected package libnode-dev:amd64. 2021-05-16T20:03:48.0548169Z Preparing to unpack .../libnode-dev_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-05-16T20:03:48.0556574Z Unpacking libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-16T20:03:48.1378359Z Setting up libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-05-16T20:03:48.1404089Z Setting up libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-16T20:03:48.1422024Z Setting up libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-16T20:03:48.1442774Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:03:50.1054032Z Reading package lists... 2021-05-16T20:03:50.2526012Z Building dependency tree... 2021-05-16T20:03:50.2542497Z Reading state information... 2021-05-16T20:03:50.3937380Z The following additional packages will be installed: 2021-05-16T20:03:50.3940008Z libfftw3-bin libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-05-16T20:03:50.3944631Z Suggested packages: 2021-05-16T20:03:50.3945591Z libfftw3-doc 2021-05-16T20:03:50.4358689Z The following NEW packages will be installed: 2021-05-16T20:03:50.4362172Z libfftw3-bin libfftw3-dev libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-05-16T20:03:50.4546964Z 0 upgraded, 5 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:03:50.4547688Z Need to get 3986 kB of archives. 2021-05-16T20:03:50.4548383Z After this operation, 22.4 MB of additional disk space will be used. 2021-05-16T20:03:50.4550603Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-long3 amd64 3.3.8-2ubuntu1 [313 kB] 2021-05-16T20:03:50.4680823Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-quad3 amd64 3.3.8-2ubuntu1 [673 kB] 2021-05-16T20:03:50.5099446Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-single3 amd64 3.3.8-2ubuntu1 [756 kB] 2021-05-16T20:03:50.5178330Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-bin amd64 3.3.8-2ubuntu1 [32.2 kB] 2021-05-16T20:03:50.5182635Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-dev amd64 3.3.8-2ubuntu1 [2211 kB] 2021-05-16T20:03:50.9236141Z Fetched 3986 kB in 0s (36.4 MB/s) 2021-05-16T20:03:50.9535709Z Selecting previously unselected package libfftw3-long3:amd64. 2021-05-16T20:03:50.9601915Z (Reading database ... 2021-05-16T20:03:50.9602677Z (Reading database ... 5% 2021-05-16T20:03:50.9603318Z (Reading database ... 10% 2021-05-16T20:03:50.9603957Z (Reading database ... 15% 2021-05-16T20:03:50.9604573Z (Reading database ... 20% 2021-05-16T20:03:50.9605200Z (Reading database ... 25% 2021-05-16T20:03:50.9605847Z (Reading database ... 30% 2021-05-16T20:03:50.9606474Z (Reading database ... 35% 2021-05-16T20:03:50.9607097Z (Reading database ... 40% 2021-05-16T20:03:50.9607704Z (Reading database ... 45% 2021-05-16T20:03:50.9608326Z (Reading database ... 50% 2021-05-16T20:03:50.9637309Z (Reading database ... 55% 2021-05-16T20:03:50.9670289Z (Reading database ... 60% 2021-05-16T20:03:50.9703039Z (Reading database ... 65% 2021-05-16T20:03:50.9813225Z (Reading database ... 70% 2021-05-16T20:03:50.9895447Z (Reading database ... 75% 2021-05-16T20:03:51.0155423Z (Reading database ... 80% 2021-05-16T20:03:51.0445360Z (Reading database ... 85% 2021-05-16T20:03:51.0583574Z (Reading database ... 90% 2021-05-16T20:03:51.0692108Z (Reading database ... 95% 2021-05-16T20:03:51.0695318Z (Reading database ... 100% 2021-05-16T20:03:51.0696127Z (Reading database ... 265059 files and directories currently installed.) 2021-05-16T20:03:51.0774470Z Preparing to unpack .../libfftw3-long3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-16T20:03:51.0790795Z Unpacking libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T20:03:51.1334446Z Selecting previously unselected package libfftw3-quad3:amd64. 2021-05-16T20:03:51.1562074Z Preparing to unpack .../libfftw3-quad3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-16T20:03:51.1569646Z Unpacking libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T20:03:51.2454045Z Selecting previously unselected package libfftw3-single3:amd64. 2021-05-16T20:03:51.2639723Z Preparing to unpack .../libfftw3-single3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-16T20:03:51.2651130Z Unpacking libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T20:03:51.3574555Z Selecting previously unselected package libfftw3-bin. 2021-05-16T20:03:51.3755732Z Preparing to unpack .../libfftw3-bin_3.3.8-2ubuntu1_amd64.deb ... 2021-05-16T20:03:51.3763773Z Unpacking libfftw3-bin (3.3.8-2ubuntu1) ... 2021-05-16T20:03:51.4054599Z Selecting previously unselected package libfftw3-dev:amd64. 2021-05-16T20:03:51.4260261Z Preparing to unpack .../libfftw3-dev_3.3.8-2ubuntu1_amd64.deb ... 2021-05-16T20:03:51.4269878Z Unpacking libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T20:03:51.6854486Z Setting up libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T20:03:51.6878743Z Setting up libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T20:03:51.6901285Z Setting up libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T20:03:51.6919040Z Setting up libfftw3-bin (3.3.8-2ubuntu1) ... 2021-05-16T20:03:51.6940343Z Setting up libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T20:03:51.6963263Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T20:03:52.4054337Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:03:54.2972678Z Reading package lists... 2021-05-16T20:03:54.4415098Z Building dependency tree... 2021-05-16T20:03:54.4431955Z Reading state information... 2021-05-16T20:03:54.5804357Z The following additional packages will be installed: 2021-05-16T20:03:54.5806138Z libdcmtk14 2021-05-16T20:03:54.6240479Z The following NEW packages will be installed: 2021-05-16T20:03:54.6244852Z dcmtk libdcmtk14 2021-05-16T20:03:54.6475397Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:03:54.6476419Z Need to get 5546 kB of archives. 2021-05-16T20:03:54.6477532Z After this operation, 26.5 MB of additional disk space will be used. 2021-05-16T20:03:54.6479377Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdcmtk14 amd64 3.6.4-2.1build2 [4682 kB] 2021-05-16T20:03:54.8170712Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 dcmtk amd64 3.6.4-2.1build2 [864 kB] 2021-05-16T20:03:55.2121199Z Fetched 5546 kB in 0s (26.1 MB/s) 2021-05-16T20:03:55.2454586Z Selecting previously unselected package libdcmtk14. 2021-05-16T20:03:55.2455886Z (Reading database ... 2021-05-16T20:03:55.2456361Z (Reading database ... 5% 2021-05-16T20:03:55.2456839Z (Reading database ... 10% 2021-05-16T20:03:55.2457305Z (Reading database ... 15% 2021-05-16T20:03:55.2457750Z (Reading database ... 20% 2021-05-16T20:03:55.2458221Z (Reading database ... 25% 2021-05-16T20:03:55.2458680Z (Reading database ... 30% 2021-05-16T20:03:55.2459135Z (Reading database ... 35% 2021-05-16T20:03:55.2459577Z (Reading database ... 40% 2021-05-16T20:03:55.2460029Z (Reading database ... 45% 2021-05-16T20:03:55.2460487Z (Reading database ... 50% 2021-05-16T20:03:55.2493187Z (Reading database ... 55% 2021-05-16T20:03:55.2525975Z (Reading database ... 60% 2021-05-16T20:03:55.2560508Z (Reading database ... 65% 2021-05-16T20:03:55.2670823Z (Reading database ... 70% 2021-05-16T20:03:55.2769548Z (Reading database ... 75% 2021-05-16T20:03:55.3014179Z (Reading database ... 80% 2021-05-16T20:03:55.3286106Z (Reading database ... 85% 2021-05-16T20:03:55.3413589Z (Reading database ... 90% 2021-05-16T20:03:55.3479996Z (Reading database ... 95% 2021-05-16T20:03:55.3480588Z (Reading database ... 100% 2021-05-16T20:03:55.3481414Z (Reading database ... 265150 files and directories currently installed.) 2021-05-16T20:03:55.3582369Z Preparing to unpack .../libdcmtk14_3.6.4-2.1build2_amd64.deb ... 2021-05-16T20:03:55.3598046Z Unpacking libdcmtk14 (3.6.4-2.1build2) ... 2021-05-16T20:03:55.9374518Z Selecting previously unselected package dcmtk. 2021-05-16T20:03:55.9585565Z Preparing to unpack .../dcmtk_3.6.4-2.1build2_amd64.deb ... 2021-05-16T20:03:56.6382270Z Unpacking dcmtk (3.6.4-2.1build2) ... 2021-05-16T20:03:56.6389610Z Setting up libdcmtk14 (3.6.4-2.1build2) ... 2021-05-16T20:03:56.6390914Z Setting up dcmtk (3.6.4-2.1build2) ... 2021-05-16T20:03:56.6391797Z Adding `dcmtk' group to system ... 2021-05-16T20:03:56.6392678Z Adding `dcmtk' user to system ... 2021-05-16T20:03:56.6394321Z adduser: Warning: The home directory `/var/lib/dcmtk/db' does not belong to the user you are currently creating. 2021-05-16T20:03:56.6395587Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T20:03:58.0603612Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:03:59.9463350Z Reading package lists... 2021-05-16T20:04:00.0968903Z Building dependency tree... 2021-05-16T20:04:00.0987641Z Reading state information... 2021-05-16T20:04:00.3169231Z libsecret-1-dev is already the newest version (0.20.3-0ubuntu1). 2021-05-16T20:04:00.3170742Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:04:00.3771940Z Reading package lists... 2021-05-16T20:04:00.5189765Z Building dependency tree... 2021-05-16T20:04:00.5206861Z Reading state information... 2021-05-16T20:04:00.7499183Z libpng-dev is already the newest version (1.6.37-2). 2021-05-16T20:04:00.7500616Z libpng-dev set to manually installed. 2021-05-16T20:04:00.7501466Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:04:00.8096946Z Reading package lists... 2021-05-16T20:04:00.9563826Z Building dependency tree... 2021-05-16T20:04:00.9580266Z Reading state information... 2021-05-16T20:04:01.0941172Z The following additional packages will be installed: 2021-05-16T20:04:01.0943605Z libopenjp2-7 libpoppler-cpp0v5 libpoppler-dev libpoppler97 poppler-data 2021-05-16T20:04:01.0948090Z Suggested packages: 2021-05-16T20:04:01.0949594Z poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho 2021-05-16T20:04:01.0951327Z fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai 2021-05-16T20:04:01.0952697Z fonts-arphic-uming fonts-nanum 2021-05-16T20:04:01.1361746Z The following NEW packages will be installed: 2021-05-16T20:04:01.1363865Z libopenjp2-7 libpoppler-cpp-dev libpoppler-cpp0v5 libpoppler-dev 2021-05-16T20:04:01.1365200Z libpoppler97 poppler-data 2021-05-16T20:04:01.1569454Z 0 upgraded, 6 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:04:01.1570427Z Need to get 2582 kB of archives. 2021-05-16T20:04:01.1571556Z After this operation, 16.7 MB of additional disk space will be used. 2021-05-16T20:04:01.1573308Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 poppler-data all 0.4.9-2 [1475 kB] 2021-05-16T20:04:01.1830539Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopenjp2-7 amd64 2.3.1-1ubuntu4.20.04.1 [141 kB] 2021-05-16T20:04:01.1847326Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler97 amd64 0.86.1-0ubuntu1 [915 kB] 2021-05-16T20:04:01.1933736Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp0v5 amd64 0.86.1-0ubuntu1 [35.6 kB] 2021-05-16T20:04:01.1937984Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-dev amd64 0.86.1-0ubuntu1 [5336 B] 2021-05-16T20:04:01.1941028Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp-dev amd64 0.86.1-0ubuntu1 [10.4 kB] 2021-05-16T20:04:01.5621006Z Fetched 2582 kB in 0s (48.0 MB/s) 2021-05-16T20:04:01.5934772Z Selecting previously unselected package poppler-data. 2021-05-16T20:04:01.5980894Z (Reading database ... 2021-05-16T20:04:01.5981687Z (Reading database ... 5% 2021-05-16T20:04:01.5982320Z (Reading database ... 10% 2021-05-16T20:04:01.5982954Z (Reading database ... 15% 2021-05-16T20:04:01.5983592Z (Reading database ... 20% 2021-05-16T20:04:01.5984353Z (Reading database ... 25% 2021-05-16T20:04:01.5984990Z (Reading database ... 30% 2021-05-16T20:04:01.5985623Z (Reading database ... 35% 2021-05-16T20:04:01.5986239Z (Reading database ... 40% 2021-05-16T20:04:01.5986847Z (Reading database ... 45% 2021-05-16T20:04:01.5987463Z (Reading database ... 50% 2021-05-16T20:04:01.6017007Z (Reading database ... 55% 2021-05-16T20:04:01.6050131Z (Reading database ... 60% 2021-05-16T20:04:01.6087000Z (Reading database ... 65% 2021-05-16T20:04:01.6195091Z (Reading database ... 70% 2021-05-16T20:04:01.6294250Z (Reading database ... 75% 2021-05-16T20:04:01.6533571Z (Reading database ... 80% 2021-05-16T20:04:01.6809574Z (Reading database ... 85% 2021-05-16T20:04:01.6941935Z (Reading database ... 90% 2021-05-16T20:04:01.7012531Z (Reading database ... 95% 2021-05-16T20:04:01.7013108Z (Reading database ... 100% 2021-05-16T20:04:01.7013915Z (Reading database ... 265385 files and directories currently installed.) 2021-05-16T20:04:01.7120061Z Preparing to unpack .../0-poppler-data_0.4.9-2_all.deb ... 2021-05-16T20:04:01.7130738Z Unpacking poppler-data (0.4.9-2) ... 2021-05-16T20:04:01.9270123Z Selecting previously unselected package libopenjp2-7:amd64. 2021-05-16T20:04:01.9536534Z Preparing to unpack .../1-libopenjp2-7_2.3.1-1ubuntu4.20.04.1_amd64.deb ... 2021-05-16T20:04:01.9554591Z Unpacking libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-05-16T20:04:01.9973637Z Selecting previously unselected package libpoppler97:amd64. 2021-05-16T20:04:02.0156972Z Preparing to unpack .../2-libpoppler97_0.86.1-0ubuntu1_amd64.deb ... 2021-05-16T20:04:02.0166483Z Unpacking libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T20:04:02.1255270Z Selecting previously unselected package libpoppler-cpp0v5:amd64. 2021-05-16T20:04:02.1476414Z Preparing to unpack .../3-libpoppler-cpp0v5_0.86.1-0ubuntu1_amd64.deb ... 2021-05-16T20:04:02.1484089Z Unpacking libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T20:04:02.1769134Z Selecting previously unselected package libpoppler-dev:amd64. 2021-05-16T20:04:02.1979071Z Preparing to unpack .../4-libpoppler-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-05-16T20:04:02.1986408Z Unpacking libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T20:04:02.2212190Z Selecting previously unselected package libpoppler-cpp-dev:amd64. 2021-05-16T20:04:02.2459812Z Preparing to unpack .../5-libpoppler-cpp-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-05-16T20:04:02.2468589Z Unpacking libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T20:04:02.2985599Z Setting up poppler-data (0.4.9-2) ... 2021-05-16T20:04:02.3060552Z Setting up libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-05-16T20:04:02.3079046Z Setting up libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T20:04:02.3096760Z Setting up libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T20:04:02.3112815Z Setting up libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T20:04:02.3128648Z Setting up libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T20:04:02.3149871Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-16T20:04:02.4154318Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:04:04.2861647Z Reading package lists... 2021-05-16T20:04:04.4283476Z Building dependency tree... 2021-05-16T20:04:04.4300837Z Reading state information... 2021-05-16T20:04:04.5677773Z The following additional packages will be installed: 2021-05-16T20:04:04.5681298Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libsz2 2021-05-16T20:04:04.5685518Z Suggested packages: 2021-05-16T20:04:04.5686424Z libhdf5-doc 2021-05-16T20:04:04.6121383Z The following NEW packages will be installed: 2021-05-16T20:04:04.6127198Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libhdf5-dev 2021-05-16T20:04:04.6131408Z libsz2 2021-05-16T20:04:04.6366941Z 0 upgraded, 7 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:04:04.6367622Z Need to get 4074 kB of archives. 2021-05-16T20:04:04.6368299Z After this operation, 17.6 MB of additional disk space will be used. 2021-05-16T20:04:04.6370344Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 hdf5-helpers amd64 1.10.4+repack-11ubuntu1 [13.6 kB] 2021-05-16T20:04:04.6388237Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec0 amd64 1.0.4-1 [19.1 kB] 2021-05-16T20:04:04.6394151Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsz2 amd64 1.0.4-1 [5188 B] 2021-05-16T20:04:04.6438239Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-103 amd64 1.10.4+repack-11ubuntu1 [1311 kB] 2021-05-16T20:04:04.6786600Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-cpp-103 amd64 1.10.4+repack-11ubuntu1 [120 kB] 2021-05-16T20:04:04.6891191Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec-dev amd64 1.0.4-1 [16.9 kB] 2021-05-16T20:04:04.6956472Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-dev amd64 1.10.4+repack-11ubuntu1 [2589 kB] 2021-05-16T20:04:05.1670228Z Fetched 4074 kB in 0s (23.3 MB/s) 2021-05-16T20:04:05.1931314Z Selecting previously unselected package hdf5-helpers. 2021-05-16T20:04:05.1997860Z (Reading database ... 2021-05-16T20:04:05.1998627Z (Reading database ... 5% 2021-05-16T20:04:05.1999280Z (Reading database ... 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2021-05-16T20:04:05.3032208Z (Reading database ... 265945 files and directories currently installed.) 2021-05-16T20:04:05.3134877Z Preparing to unpack .../0-hdf5-helpers_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-16T20:04:05.3150598Z Unpacking hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-05-16T20:04:05.3373573Z Selecting previously unselected package libaec0:amd64. 2021-05-16T20:04:05.3629508Z Preparing to unpack .../1-libaec0_1.0.4-1_amd64.deb ... 2021-05-16T20:04:05.3645406Z Unpacking libaec0:amd64 (1.0.4-1) ... 2021-05-16T20:04:05.3933249Z Selecting previously unselected package libsz2:amd64. 2021-05-16T20:04:05.4106344Z Preparing to unpack .../2-libsz2_1.0.4-1_amd64.deb ... 2021-05-16T20:04:05.4115873Z Unpacking libsz2:amd64 (1.0.4-1) ... 2021-05-16T20:04:05.4414413Z Selecting previously unselected package libhdf5-103:amd64. 2021-05-16T20:04:05.4607970Z Preparing to unpack .../3-libhdf5-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-16T20:04:05.4617950Z Unpacking libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-16T20:04:05.5933845Z Selecting previously unselected package libhdf5-cpp-103:amd64. 2021-05-16T20:04:05.6198900Z Preparing to unpack .../4-libhdf5-cpp-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-16T20:04:05.6206188Z Unpacking libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-16T20:04:05.6502662Z Selecting previously unselected package libaec-dev:amd64. 2021-05-16T20:04:05.6768656Z Preparing to unpack .../5-libaec-dev_1.0.4-1_amd64.deb ... 2021-05-16T20:04:05.6775936Z Unpacking libaec-dev:amd64 (1.0.4-1) ... 2021-05-16T20:04:05.7053694Z Selecting previously unselected package libhdf5-dev. 2021-05-16T20:04:05.7255673Z Preparing to unpack .../6-libhdf5-dev_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-16T20:04:05.7264395Z Unpacking libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-05-16T20:04:06.0720218Z Setting up hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-05-16T20:04:06.0750791Z Setting up libaec0:amd64 (1.0.4-1) ... 2021-05-16T20:04:06.0770648Z Setting up libsz2:amd64 (1.0.4-1) ... 2021-05-16T20:04:06.0789195Z Setting up libaec-dev:amd64 (1.0.4-1) ... 2021-05-16T20:04:06.0807196Z Setting up libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-16T20:04:06.0825822Z Setting up libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-16T20:04:06.0853552Z Setting up libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-05-16T20:04:06.0921403Z update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 2021-05-16T20:04:06.0940920Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T20:04:06.7772010Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:04:08.6603326Z Reading package lists... 2021-05-16T20:04:08.7999523Z Building dependency tree... 2021-05-16T20:04:08.8017008Z Reading state information... 2021-05-16T20:04:08.9402769Z The following additional packages will be installed: 2021-05-16T20:04:08.9406062Z libdrm-dev libgl-dev libglu1-mesa libglx-dev 2021-05-16T20:04:08.9837229Z The following NEW packages will be installed: 2021-05-16T20:04:08.9840138Z libdrm-dev libgl-dev libglu1-mesa libglu1-mesa-dev libglx-dev 2021-05-16T20:04:08.9841985Z mesa-common-dev 2021-05-16T20:04:09.0508471Z 0 upgraded, 6 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:04:09.0509637Z Need to get 1761 kB of archives. 2021-05-16T20:04:09.0510883Z After this operation, 5442 kB of additional disk space will be used. 2021-05-16T20:04:09.0513090Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libdrm-dev amd64 2.4.102-1ubuntu1~20.04.1 [126 kB] 2021-05-16T20:04:09.0625119Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libglx-dev amd64 1.3.2-1~ubuntu0.20.04.1 [14.0 kB] 2021-05-16T20:04:09.0631716Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [97.8 kB] 2021-05-16T20:04:09.0653142Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa amd64 9.0.1-1build1 [168 kB] 2021-05-16T20:04:09.0706904Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa-dev amd64 9.0.1-1build1 [207 kB] 2021-05-16T20:04:09.0898483Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-common-dev amd64 20.2.6-0ubuntu0.20.04.1 [1148 kB] 2021-05-16T20:04:09.4988933Z Fetched 1761 kB in 0s (12.9 MB/s) 2021-05-16T20:04:09.5254957Z Selecting previously unselected package libdrm-dev:amd64. 2021-05-16T20:04:09.5318785Z (Reading database ... 2021-05-16T20:04:09.5319458Z (Reading database ... 5% 2021-05-16T20:04:09.5320102Z (Reading database ... 10% 2021-05-16T20:04:09.5320735Z (Reading database ... 15% 2021-05-16T20:04:09.5321394Z (Reading database ... 20% 2021-05-16T20:04:09.5322019Z (Reading database ... 25% 2021-05-16T20:04:09.5322652Z (Reading database ... 30% 2021-05-16T20:04:09.5323273Z (Reading 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(2.4.102-1ubuntu1~20.04.1) ... 2021-05-16T20:04:09.6808302Z Selecting previously unselected package libglx-dev:amd64. 2021-05-16T20:04:09.7074337Z Preparing to unpack .../1-libglx-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T20:04:09.7084137Z Unpacking libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:04:09.7516741Z Selecting previously unselected package libgl-dev:amd64. 2021-05-16T20:04:09.7780678Z Preparing to unpack .../2-libgl-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T20:04:09.7789427Z Unpacking libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:04:09.8174911Z Selecting previously unselected package libglu1-mesa:amd64. 2021-05-16T20:04:09.8388337Z Preparing to unpack .../3-libglu1-mesa_9.0.1-1build1_amd64.deb ... 2021-05-16T20:04:09.8403429Z Unpacking libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-05-16T20:04:09.8748859Z Selecting previously unselected package libglu1-mesa-dev:amd64. 2021-05-16T20:04:09.9014790Z Preparing to unpack .../4-libglu1-mesa-dev_9.0.1-1build1_amd64.deb ... 2021-05-16T20:04:09.9023163Z Unpacking libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-05-16T20:04:09.9475674Z Selecting previously unselected package mesa-common-dev:amd64. 2021-05-16T20:04:09.9696762Z Preparing to unpack .../5-mesa-common-dev_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-16T20:04:09.9704264Z Unpacking mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T20:04:10.1212559Z Setting up libdrm-dev:amd64 (2.4.102-1ubuntu1~20.04.1) ... 2021-05-16T20:04:10.1233408Z Setting up libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:04:10.1249810Z Setting up libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-05-16T20:04:10.1266950Z Setting up libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:04:10.1288043Z Setting up libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-05-16T20:04:10.1305922Z Setting up mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T20:04:10.1325160Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T20:04:11.3974355Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:04:13.2626815Z Reading package lists... 2021-05-16T20:04:13.4010505Z Building dependency tree... 2021-05-16T20:04:13.4027074Z Reading state information... 2021-05-16T20:04:13.5389842Z The following additional packages will be installed: 2021-05-16T20:04:13.5391742Z libprotobuf-lite17 libprotoc17 2021-05-16T20:04:13.5813270Z The following NEW packages will be installed: 2021-05-16T20:04:13.5815295Z libprotobuf-dev libprotobuf-lite17 libprotoc-dev libprotoc17 2021-05-16T20:04:13.5816439Z protobuf-compiler 2021-05-16T20:04:13.6045529Z 0 upgraded, 5 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:04:13.6046741Z Need to get 2754 kB of archives. 2021-05-16T20:04:13.6047841Z After this operation, 19.9 MB of additional disk space will be used. 2021-05-16T20:04:13.6049668Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-lite17 amd64 3.6.1.3-2ubuntu5 [132 kB] 2021-05-16T20:04:13.6202869Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc17 amd64 3.6.1.3-2ubuntu5 [646 kB] 2021-05-16T20:04:13.6516649Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-dev amd64 3.6.1.3-2ubuntu5 [1155 kB] 2021-05-16T20:04:13.7858051Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc-dev amd64 3.6.1.3-2ubuntu5 [793 kB] 2021-05-16T20:04:13.8157743Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 protobuf-compiler amd64 3.6.1.3-2ubuntu5 [27.6 kB] 2021-05-16T20:04:14.1922337Z Fetched 2754 kB in 0s (11.8 MB/s) 2021-05-16T20:04:14.2215479Z Selecting previously unselected package libprotobuf-lite17:amd64. 2021-05-16T20:04:15.1421233Z (Reading database ... 2021-05-16T20:04:15.1422429Z (Reading database ... 5% 2021-05-16T20:04:15.1422992Z (Reading database ... 10% 2021-05-16T20:04:15.1423440Z (Reading database ... 15% 2021-05-16T20:04:15.1423901Z (Reading 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2021-05-16T20:04:15.1433868Z Preparing to unpack .../libprotobuf-lite17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-16T20:04:15.1434869Z Unpacking libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T20:04:15.1435818Z Selecting previously unselected package libprotoc17:amd64. 2021-05-16T20:04:15.1436793Z Preparing to unpack .../libprotoc17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-16T20:04:15.1437649Z Unpacking libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T20:04:15.1438578Z Selecting previously unselected package libprotobuf-dev:amd64. 2021-05-16T20:04:15.1439625Z Preparing to unpack .../libprotobuf-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-16T20:04:15.1440545Z Unpacking libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T20:04:15.1441482Z Selecting previously unselected package libprotoc-dev:amd64. 2021-05-16T20:04:15.1442489Z Preparing to unpack .../libprotoc-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-16T20:04:15.1443355Z Unpacking libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T20:04:15.1444311Z Selecting previously unselected package protobuf-compiler. 2021-05-16T20:04:15.1445375Z Preparing to unpack .../protobuf-compiler_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-16T20:04:15.1446312Z Unpacking protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-05-16T20:04:15.1447137Z Setting up libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T20:04:15.1447946Z Setting up protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-05-16T20:04:15.1448847Z Setting up libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T20:04:15.1449721Z Setting up libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T20:04:15.1450564Z Setting up libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T20:04:15.1451318Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T20:04:15.5343517Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:04:17.3838467Z Reading package lists... 2021-05-16T20:04:17.5283739Z Building dependency tree... 2021-05-16T20:04:17.5300976Z Reading state information... 2021-05-16T20:04:17.6737459Z The following additional packages will be installed: 2021-05-16T20:04:17.6739738Z i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 libasyncns0 2021-05-16T20:04:17.6741469Z libavc1394-0 libavcodec58 libavdevice58 libavfilter7 libavformat58 2021-05-16T20:04:17.6742838Z libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 libcaca0 2021-05-16T20:04:17.6744527Z libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 libcodec2-0.9 2021-05-16T20:04:17.6746143Z libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 libigdgmm11 2021-05-16T20:04:17.6754266Z libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-05-16T20:04:17.6755808Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-05-16T20:04:17.6757153Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-05-16T20:04:17.6758437Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-05-16T20:04:17.6760260Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-05-16T20:04:17.6761928Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-05-16T20:04:17.6763066Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-05-16T20:04:17.6764425Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-05-16T20:04:17.6765488Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-05-16T20:04:17.6766181Z Suggested packages: 2021-05-16T20:04:17.6767138Z ffmpeg-doc i965-va-driver-shaders libbluray-bdj jackd2 libportaudio2 2021-05-16T20:04:17.6768291Z opus-tools pulseaudio libraw1394-doc serdi sndiod sordi speex opencl-icd 2021-05-16T20:04:17.6769555Z libvdpau-va-gl1 nvidia-vdpau-driver nvidia-legacy-340xx-vdpau-driver 2021-05-16T20:04:17.6770712Z nvidia-legacy-304xx-vdpau-driver 2021-05-16T20:04:17.7411987Z The following NEW packages will be installed: 2021-05-16T20:04:17.7418156Z ffmpeg i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 2021-05-16T20:04:17.7419471Z libasyncns0 libavc1394-0 libavcodec58 libavdevice58 libavfilter7 2021-05-16T20:04:17.7420634Z libavformat58 libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 2021-05-16T20:04:17.7422221Z libcaca0 libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 2021-05-16T20:04:17.7423569Z libcodec2-0.9 libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 2021-05-16T20:04:17.7424929Z libigdgmm11 libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-05-16T20:04:17.7426312Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-05-16T20:04:17.7427681Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-05-16T20:04:17.7428963Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-05-16T20:04:17.7430266Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-05-16T20:04:17.7431629Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-05-16T20:04:17.7432882Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-05-16T20:04:17.7434645Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-05-16T20:04:17.7436017Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-05-16T20:04:17.7618468Z 0 upgraded, 76 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:04:17.7619598Z Need to get 47.1 MB of archives. 2021-05-16T20:04:17.7620294Z After this operation, 195 MB of additional disk space will be used. 2021-05-16T20:04:17.7622364Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaom0 amd64 1.0.0.errata1-3build1 [1160 kB] 2021-05-16T20:04:17.7728285Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva2 amd64 2.7.0-2 [53.5 kB] 2021-05-16T20:04:17.7734200Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-drm2 amd64 2.7.0-2 [7044 B] 2021-05-16T20:04:17.7775893Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-x11-2 amd64 2.7.0-2 [11.9 kB] 2021-05-16T20:04:17.7780370Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvdpau1 amd64 1.3-1ubuntu2 [25.6 kB] 2021-05-16T20:04:17.7784096Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1ubuntu1 [30.3 kB] 2021-05-16T20:04:17.7789556Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavutil56 amd64 7:4.2.4-1ubuntu0.1 [241 kB] 2021-05-16T20:04:17.7793345Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcodec2-0.9 amd64 0.9.2-2 [7886 kB] 2021-05-16T20:04:17.8370000Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgsm1 amd64 1.0.18-2 [24.4 kB] 2021-05-16T20:04:17.8374910Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmp3lame0 amd64 3.100-3 [133 kB] 2021-05-16T20:04:17.8388564Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libopus0 amd64 1.3.1-0ubuntu1 [191 kB] 2021-05-16T20:04:17.8401296Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libshine3 amd64 3.1.1-2 [23.2 kB] 2021-05-16T20:04:17.8406718Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsnappy1v5 amd64 1.1.8-1build1 [16.7 kB] 2021-05-16T20:04:17.8411941Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libspeex1 amd64 1.2~rc1.2-1.1ubuntu1 [53.2 kB] 2021-05-16T20:04:17.8456245Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsoxr0 amd64 0.1.3-2build1 [78.0 kB] 2021-05-16T20:04:17.8460849Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswresample3 amd64 7:4.2.4-1ubuntu0.1 [57.1 kB] 2021-05-16T20:04:17.8469465Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtheora0 amd64 1.1.1+dfsg.1-15ubuntu2 [162 kB] 2021-05-16T20:04:17.8474020Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtwolame0 amd64 0.4.0-2 [47.6 kB] 2021-05-16T20:04:17.8480667Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvorbisenc2 amd64 1.3.6-2ubuntu1 [70.7 kB] 2021-05-16T20:04:17.8487116Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwavpack1 amd64 5.2.0-1ubuntu0.1 [77.3 kB] 2021-05-16T20:04:17.8491937Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx264-155 amd64 2:0.155.2917+git0a84d98-2 [521 kB] 2021-05-16T20:04:17.8509098Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx265-179 amd64 3.2.1-1build1 [1060 kB] 2021-05-16T20:04:17.8589006Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxvidcore4 amd64 2:1.3.7-1 [201 kB] 2021-05-16T20:04:17.8606962Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi-common all 0.2.35-17 [32.5 kB] 2021-05-16T20:04:17.8611707Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi0 amd64 0.2.35-17 [237 kB] 2021-05-16T20:04:17.8631128Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavcodec58 amd64 7:4.2.4-1ubuntu0.1 [4876 kB] 2021-05-16T20:04:17.9075094Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libraw1394-11 amd64 2.1.2-1 [30.7 kB] 2021-05-16T20:04:17.9079940Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavc1394-0 amd64 0.5.4-5 [16.2 kB] 2021-05-16T20:04:17.9087228Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libass9 amd64 1:0.14.0-2 [88.0 kB] 2021-05-16T20:04:17.9095107Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbluray2 amd64 1:1.2.0-1 [138 kB] 2021-05-16T20:04:17.9106835Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libchromaprint1 amd64 1.4.3-3build1 [37.6 kB] 2021-05-16T20:04:17.9112349Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgme0 amd64 0.6.2-1build1 [123 kB] 2021-05-16T20:04:17.9123160Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmpg123-0 amd64 1.25.13-1 [124 kB] 2021-05-16T20:04:17.9134289Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenmpt0 amd64 0.4.11-1build1 [599 kB] 2021-05-16T20:04:17.9180141Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-gcrypt-4 amd64 0.9.3-2ubuntu2.1 [201 kB] 2021-05-16T20:04:17.9201492Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavformat58 amd64 7:4.2.4-1ubuntu0.1 [981 kB] 2021-05-16T20:04:17.9295298Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbs2b0 amd64 3.1.0+dfsg-2.2build1 [10.2 kB] 2021-05-16T20:04:17.9330123Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libflite1 amd64 2.1-release-3 [12.8 MB] 2021-05-16T20:04:18.0206688Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libserd-0-0 amd64 0.30.2-1 [46.6 kB] 2021-05-16T20:04:18.0211642Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsord-0-0 amd64 0.16.4-1 [19.5 kB] 2021-05-16T20:04:18.0216608Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsratom-0-0 amd64 0.6.4-1 [16.9 kB] 2021-05-16T20:04:18.0221282Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 liblilv-0-0 amd64 0.24.6-1ubuntu0.1 [40.6 kB] 2021-05-16T20:04:18.0226214Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmysofa1 amd64 1.0~dfsg0-1 [39.2 kB] 2021-05-16T20:04:18.0231580Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libpostproc55 amd64 7:4.2.4-1ubuntu0.1 [55.3 kB] 2021-05-16T20:04:18.0239251Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsamplerate0 amd64 0.1.9-2 [939 kB] 2021-05-16T20:04:18.0310000Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 librubberband2 amd64 1.8.2-1build1 [89.4 kB] 2021-05-16T20:04:18.0318214Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswscale5 amd64 7:4.2.4-1ubuntu0.1 [156 kB] 2021-05-16T20:04:18.0338420Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libvidstab1.1 amd64 1.1.0-2 [35.0 kB] 2021-05-16T20:04:18.0343990Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavfilter7 amd64 7:4.2.4-1ubuntu0.1 [1084 kB] 2021-05-16T20:04:18.0445734Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcaca0 amd64 0.99.beta19-2.1ubuntu1.20.04.1 [202 kB] 2021-05-16T20:04:18.0466665Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio18 amd64 2.0.0-2 [58.6 kB] 2021-05-16T20:04:18.0474722Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-cdda2 amd64 10.2+2.0.0-1 [17.6 kB] 2021-05-16T20:04:18.0500137Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-paranoia2 amd64 10.2+2.0.0-1 [16.2 kB] 2021-05-16T20:04:18.0501770Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdc1394-22 amd64 2.2.5-2.1 [79.6 kB] 2021-05-16T20:04:18.0503257Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libiec61883-0 amd64 1.2.0-3 [24.3 kB] 2021-05-16T20:04:18.0504868Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjack-jackd2-0 amd64 1.9.12~dfsg-2ubuntu2 [267 kB] 2021-05-16T20:04:18.0513779Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal-data all 1:1.19.1-1 [162 kB] 2021-05-16T20:04:18.0528792Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsndio7.0 amd64 1.5.0-3 [24.5 kB] 2021-05-16T20:04:18.0534575Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal1 amd64 1:1.19.1-1 [492 kB] 2021-05-16T20:04:18.0573501Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasyncns0 amd64 0.8-6 [12.1 kB] 2021-05-16T20:04:18.0579772Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libflac8 amd64 1.3.3-1build1 [103 kB] 2021-05-16T20:04:18.0587591Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsndfile1 amd64 1.0.28-7 [170 kB] 2021-05-16T20:04:18.0604577Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libpulse0 amd64 1:13.99.1-1ubuntu3.10 [262 kB] 2021-05-16T20:04:18.0629814Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsdl2-2.0-0 amd64 2.0.10+dfsg1-3 [407 kB] 2021-05-16T20:04:18.0662079Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavdevice58 amd64 7:4.2.4-1ubuntu0.1 [74.3 kB] 2021-05-16T20:04:18.0671716Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavresample4 amd64 7:4.2.4-1ubuntu0.1 [54.2 kB] 2021-05-16T20:04:18.0678756Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 ffmpeg amd64 7:4.2.4-1ubuntu0.1 [1453 kB] 2021-05-16T20:04:18.0814650Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libigdgmm11 amd64 20.1.1+ds1-1 [111 kB] 2021-05-16T20:04:18.0824555Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 intel-media-va-driver amd64 20.1.1+dfsg1-1 [1764 kB] 2021-05-16T20:04:18.0949949Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaacs0 amd64 0.9.0-2 [50.1 kB] 2021-05-16T20:04:18.0955913Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbdplus0 amd64 0.1.2-3 [47.3 kB] 2021-05-16T20:04:18.0961444Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 mesa-va-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2618 kB] 2021-05-16T20:04:18.1200335Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-vdpau-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2744 kB] 2021-05-16T20:04:18.1474899Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 i965-va-driver amd64 2.4.0-0ubuntu1 [924 kB] 2021-05-16T20:04:18.1649562Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 va-driver-all amd64 2.7.0-2 [4020 B] 2021-05-16T20:04:18.1656395Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 vdpau-driver-all amd64 1.3-1ubuntu2 [4596 B] 2021-05-16T20:04:18.6986183Z Fetched 47.1 MB in 0s (113 MB/s) 2021-05-16T20:04:18.7257646Z Selecting previously unselected package libaom0:amd64. 2021-05-16T20:04:18.7327633Z (Reading database ... 2021-05-16T20:04:18.7328540Z (Reading database ... 5% 2021-05-16T20:04:18.7329131Z (Reading database ... 10% 2021-05-16T20:04:18.7329690Z (Reading database ... 15% 2021-05-16T20:04:18.7330324Z (Reading database ... 20% 2021-05-16T20:04:18.7330877Z (Reading database ... 25% 2021-05-16T20:04:18.7331562Z (Reading database ... 30% 2021-05-16T20:04:18.7332129Z (Reading database ... 35% 2021-05-16T20:04:18.7333059Z (Reading database ... 40% 2021-05-16T20:04:18.7333626Z (Reading database ... 45% 2021-05-16T20:04:18.7334179Z (Reading database ... 50% 2021-05-16T20:04:18.7366118Z (Reading database ... 55% 2021-05-16T20:04:18.7397625Z (Reading database ... 60% 2021-05-16T20:04:18.7432004Z (Reading database ... 65% 2021-05-16T20:04:18.7544879Z (Reading database ... 70% 2021-05-16T20:04:18.7645194Z (Reading database ... 75% 2021-05-16T20:04:18.7887194Z (Reading database ... 80% 2021-05-16T20:04:18.8159796Z (Reading database ... 85% 2021-05-16T20:04:18.8286548Z (Reading database ... 90% 2021-05-16T20:04:18.8357135Z (Reading database ... 95% 2021-05-16T20:04:18.8357691Z (Reading database ... 100% 2021-05-16T20:04:18.8358507Z (Reading database ... 266807 files and directories currently installed.) 2021-05-16T20:04:18.8464865Z Preparing to unpack .../00-libaom0_1.0.0.errata1-3build1_amd64.deb ... 2021-05-16T20:04:18.8481213Z Unpacking libaom0:amd64 (1.0.0.errata1-3build1) ... 2021-05-16T20:04:18.9773925Z Selecting previously unselected package libva2:amd64. 2021-05-16T20:04:18.9980016Z Preparing to unpack .../01-libva2_2.7.0-2_amd64.deb ... 2021-05-16T20:04:18.9988178Z Unpacking libva2:amd64 (2.7.0-2) ... 2021-05-16T20:04:19.0232296Z Selecting previously unselected package libva-drm2:amd64. 2021-05-16T20:04:19.0503095Z Preparing to unpack .../02-libva-drm2_2.7.0-2_amd64.deb ... 2021-05-16T20:04:19.0512604Z Unpacking libva-drm2:amd64 (2.7.0-2) ... 2021-05-16T20:04:19.0724639Z Selecting previously unselected package libva-x11-2:amd64. 2021-05-16T20:04:19.0994929Z Preparing to unpack .../03-libva-x11-2_2.7.0-2_amd64.deb ... 2021-05-16T20:04:19.1002570Z Unpacking libva-x11-2:amd64 (2.7.0-2) ... 2021-05-16T20:04:19.1205225Z Selecting previously unselected package libvdpau1:amd64. 2021-05-16T20:04:19.1477964Z Preparing to unpack .../04-libvdpau1_1.3-1ubuntu2_amd64.deb ... 2021-05-16T20:04:19.1485847Z Unpacking libvdpau1:amd64 (1.3-1ubuntu2) ... 2021-05-16T20:04:19.1821319Z Selecting previously unselected package ocl-icd-libopencl1:amd64. 2021-05-16T20:04:19.2092730Z Preparing to unpack .../05-ocl-icd-libopencl1_2.2.11-1ubuntu1_amd64.deb ... 2021-05-16T20:04:19.2100888Z Unpacking ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... 2021-05-16T20:04:19.2373599Z Selecting previously unselected package libavutil56:amd64. 2021-05-16T20:04:19.2596304Z Preparing to unpack .../06-libavutil56_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-05-16T20:04:19.2604688Z Unpacking libavutil56:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T20:04:19.3094367Z Selecting previously unselected package libcodec2-0.9:amd64. 2021-05-16T20:04:19.3276966Z Preparing to unpack .../07-libcodec2-0.9_0.9.2-2_amd64.deb ... 2021-05-16T20:04:19.3286081Z Unpacking libcodec2-0.9:amd64 (0.9.2-2) ... 2021-05-16T20:04:19.9853565Z Selecting previously unselected package libgsm1:amd64. 2021-05-16T20:04:20.0052777Z Preparing to unpack .../08-libgsm1_1.0.18-2_amd64.deb ... 2021-05-16T20:04:20.0063218Z Unpacking libgsm1:amd64 (1.0.18-2) ... 2021-05-16T20:04:20.0374039Z Selecting previously unselected package libmp3lame0:amd64. 2021-05-16T20:04:20.0563146Z Preparing to unpack .../09-libmp3lame0_3.100-3_amd64.deb ... 2021-05-16T20:04:20.0571203Z Unpacking libmp3lame0:amd64 (3.100-3) ... 2021-05-16T20:04:20.0933252Z Selecting previously unselected package libopus0:amd64. 2021-05-16T20:04:20.1158913Z Preparing to unpack .../10-libopus0_1.3.1-0ubuntu1_amd64.deb ... 2021-05-16T20:04:20.1165958Z Unpacking libopus0:amd64 (1.3.1-0ubuntu1) ... 2021-05-16T20:04:20.1548978Z Selecting previously unselected package libshine3:amd64. 2021-05-16T20:04:20.1822657Z Preparing to unpack .../11-libshine3_3.1.1-2_amd64.deb ... 2021-05-16T20:04:20.1829372Z Unpacking libshine3:amd64 (3.1.1-2) ... 2021-05-16T20:04:20.2031113Z Selecting previously unselected package libsnappy1v5:amd64. 2021-05-16T20:04:20.2303588Z Preparing to unpack .../12-libsnappy1v5_1.1.8-1build1_amd64.deb ... 2021-05-16T20:04:20.2313174Z Unpacking libsnappy1v5:amd64 (1.1.8-1build1) ... 2021-05-16T20:04:20.2613735Z Selecting previously unselected package libspeex1:amd64. 2021-05-16T20:04:20.2824327Z Preparing to unpack .../13-libspeex1_1.2~rc1.2-1.1ubuntu1_amd64.deb ... 2021-05-16T20:04:20.2840289Z Unpacking libspeex1:amd64 (1.2~rc1.2-1.1ubuntu1) ... 2021-05-16T20:04:20.3133997Z Selecting previously unselected package libsoxr0:amd64. 2021-05-16T20:04:20.3354818Z Preparing to unpack .../14-libsoxr0_0.1.3-2build1_amd64.deb ... 2021-05-16T20:04:20.3362717Z Unpacking libsoxr0:amd64 (0.1.3-2build1) ... 2021-05-16T20:04:20.3666006Z Selecting previously unselected package libswresample3:amd64. 2021-05-16T20:04:20.3899714Z Preparing to unpack .../15-libswresample3_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-05-16T20:04:20.3908381Z Unpacking libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T20:04:20.4206371Z Selecting previously unselected package libtheora0:amd64. 2021-05-16T20:04:20.4427463Z Preparing to unpack .../16-libtheora0_1.1.1+dfsg.1-15ubuntu2_amd64.deb ... 2021-05-16T20:04:20.4435477Z Unpacking libtheora0:amd64 (1.1.1+dfsg.1-15ubuntu2) ... 2021-05-16T20:04:20.4813902Z Selecting previously unselected package libtwolame0:amd64. 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2021-05-16T20:04:26.6632208Z Setting up libshine3:amd64 (3.1.1-2) ... 2021-05-16T20:04:26.6648277Z Setting up libcaca0:amd64 (0.99.beta19-2.1ubuntu1.20.04.1) ... 2021-05-16T20:04:26.6668947Z Setting up libtwolame0:amd64 (0.4.0-2) ... 2021-05-16T20:04:26.6687859Z Setting up libgsm1:amd64 (1.0.18-2) ... 2021-05-16T20:04:26.6705024Z Setting up libx264-155:amd64 (2:0.155.2917+git0a84d98-2) ... 2021-05-16T20:04:26.6722356Z Setting up libx265-179:amd64 (3.2.1-1build1) ... 2021-05-16T20:04:26.6738681Z Setting up libsoxr0:amd64 (0.1.3-2build1) ... 2021-05-16T20:04:26.6763269Z Setting up libaom0:amd64 (1.0.0.errata1-3build1) ... 2021-05-16T20:04:26.6787566Z Setting up libmysofa1:amd64 (1.0~dfsg0-1) ... 2021-05-16T20:04:26.6804348Z Setting up libdc1394-22:amd64 (2.2.5-2.1) ... 2021-05-16T20:04:26.6820626Z Setting up libcdio18:amd64 (2.0.0-2) ... 2021-05-16T20:04:26.6838471Z Setting up libxvidcore4:amd64 (2:1.3.7-1) ... 2021-05-16T20:04:26.6855601Z Setting up libsnappy1v5:amd64 (1.1.8-1build1) ... 2021-05-16T20:04:26.6873442Z Setting up libflac8:amd64 (1.3.3-1build1) ... 2021-05-16T20:04:26.6892623Z Setting up libass9:amd64 (1:0.14.0-2) ... 2021-05-16T20:04:26.6909444Z Setting up libva2:amd64 (2.7.0-2) ... 2021-05-16T20:04:26.6926967Z Setting up libigdgmm11:amd64 (20.1.1+ds1-1) ... 2021-05-16T20:04:26.6954531Z Setting up libcodec2-0.9:amd64 (0.9.2-2) ... 2021-05-16T20:04:26.6971700Z Setting up libopus0:amd64 (1.3.1-0ubuntu1) ... 2021-05-16T20:04:26.6992694Z Setting up intel-media-va-driver:amd64 (20.1.1+dfsg1-1) ... 2021-05-16T20:04:26.7007344Z Setting up libaacs0:amd64 (0.9.0-2) ... 2021-05-16T20:04:26.7029073Z Setting up libsndio7.0:amd64 (1.5.0-3) ... 2021-05-16T20:04:26.7050925Z Setting up libbdplus0:amd64 (0.1.2-3) ... 2021-05-16T20:04:26.7073900Z Setting up libvidstab1.1:amd64 (1.1.0-2) ... 2021-05-16T20:04:26.7093975Z Setting up libflite1:amd64 (2.1-release-3) ... 2021-05-16T20:04:26.7124577Z Setting up libva-drm2:amd64 (2.7.0-2) ... 2021-05-16T20:04:26.7145610Z Setting up ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... 2021-05-16T20:04:26.7174244Z Setting up libasyncns0:amd64 (0.8-6) ... 2021-05-16T20:04:26.7199471Z Setting up libvdpau1:amd64 (1.3-1ubuntu2) ... 2021-05-16T20:04:26.7229953Z Setting up libwavpack1:amd64 (5.2.0-1ubuntu0.1) ... 2021-05-16T20:04:26.7252047Z Setting up libbs2b0:amd64 (3.1.0+dfsg-2.2build1) ... 2021-05-16T20:04:26.7271804Z Setting up libtheora0:amd64 (1.1.1+dfsg.1-15ubuntu2) ... 2021-05-16T20:04:26.7293169Z Setting up libopenal-data (1:1.19.1-1) ... 2021-05-16T20:04:26.7318593Z Setting up mesa-va-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T20:04:26.7334878Z Setting up libbluray2:amd64 (1:1.2.0-1) ... 2021-05-16T20:04:26.7350823Z Setting up libsamplerate0:amd64 (0.1.9-2) ... 2021-05-16T20:04:26.7376815Z Setting up libva-x11-2:amd64 (2.7.0-2) ... 2021-05-16T20:04:26.7396365Z Setting up libopenmpt0:amd64 (0.4.11-1build1) ... 2021-05-16T20:04:26.7420642Z Setting up libzvbi-common (0.2.35-17) ... 2021-05-16T20:04:26.7438943Z Setting up libmp3lame0:amd64 (3.100-3) ... 2021-05-16T20:04:26.7606105Z Setting up i965-va-driver:amd64 (2.4.0-0ubuntu1) ... 2021-05-16T20:04:26.7626540Z Setting up libvorbisenc2:amd64 (1.3.6-2ubuntu1) ... 2021-05-16T20:04:26.7643793Z Setting up libiec61883-0:amd64 (1.2.0-3) ... 2021-05-16T20:04:26.7660731Z Setting up libserd-0-0:amd64 (0.30.2-1) ... 2021-05-16T20:04:26.7680011Z Setting up libavc1394-0:amd64 (0.5.4-5) ... 2021-05-16T20:04:26.7698048Z Setting up mesa-vdpau-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T20:04:26.7717229Z Setting up libzvbi0:amd64 (0.2.35-17) ... 2021-05-16T20:04:26.7737003Z Setting up libcdio-cdda2:amd64 (10.2+2.0.0-1) ... 2021-05-16T20:04:26.7754549Z Setting up libcdio-paranoia2:amd64 (10.2+2.0.0-1) ... 2021-05-16T20:04:26.7771992Z Setting up libopenal1:amd64 (1:1.19.1-1) ... 2021-05-16T20:04:26.7790109Z Setting up libavutil56:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T20:04:26.7811969Z Setting up va-driver-all:amd64 (2.7.0-2) ... 2021-05-16T20:04:26.7831210Z Setting up libpostproc55:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T20:04:26.7849235Z Setting up librubberband2:amd64 (1.8.2-1build1) ... 2021-05-16T20:04:26.7872831Z Setting up libjack-jackd2-0:amd64 (1.9.12~dfsg-2ubuntu2) ... 2021-05-16T20:04:26.7890661Z Setting up vdpau-driver-all:amd64 (1.3-1ubuntu2) ... 2021-05-16T20:04:26.7906863Z Setting up libsord-0-0:amd64 (0.16.4-1) ... 2021-05-16T20:04:26.7926859Z Setting up libsratom-0-0:amd64 (0.6.4-1) ... 2021-05-16T20:04:26.7945879Z Setting up libswscale5:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T20:04:26.7964957Z Setting up libsndfile1:amd64 (1.0.28-7) ... 2021-05-16T20:04:26.7983193Z Setting up liblilv-0-0:amd64 (0.24.6-1ubuntu0.1) ... 2021-05-16T20:04:26.8007555Z Setting up libpulse0:amd64 (1:13.99.1-1ubuntu3.10) ... 2021-05-16T20:04:26.8161723Z Setting up libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T20:04:26.8183015Z Setting up libavresample4:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T20:04:26.8209308Z Setting up libavcodec58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T20:04:26.8225957Z Setting up libsdl2-2.0-0:amd64 (2.0.10+dfsg1-3) ... 2021-05-16T20:04:26.8244237Z Setting up libchromaprint1:amd64 (1.4.3-3build1) ... 2021-05-16T20:04:26.8262124Z Setting up libavformat58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T20:04:26.8278327Z Setting up libavfilter7:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T20:04:26.8295210Z Setting up libavdevice58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T20:04:26.8313037Z Setting up ffmpeg (7:4.2.4-1ubuntu0.1) ... 2021-05-16T20:04:26.8390578Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T20:04:27.8155310Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:04:29.7027477Z Reading package lists... 2021-05-16T20:04:29.8463868Z Building dependency tree... 2021-05-16T20:04:29.8481397Z Reading state information... 2021-05-16T20:04:29.9851713Z The following additional packages will be installed: 2021-05-16T20:04:29.9855615Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-05-16T20:04:30.0331125Z The following NEW packages will be installed: 2021-05-16T20:04:30.0333125Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-05-16T20:04:30.0335859Z libmagick++-dev 2021-05-16T20:04:30.0587740Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:04:30.0589042Z Need to get 309 kB of archives. 2021-05-16T20:04:30.0590309Z After this operation, 2202 kB of additional disk space will be used. 2021-05-16T20:04:30.0592443Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6-headers all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [47.5 kB] 2021-05-16T20:04:30.0725656Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-8 amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [133 kB] 2021-05-16T20:04:30.0882674Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-dev amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [127 kB] 2021-05-16T20:04:30.1008600Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-dev all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [1404 B] 2021-05-16T20:04:30.4888464Z Fetched 309 kB in 0s (4885 kB/s) 2021-05-16T20:04:30.5214477Z Selecting previously unselected package libmagick++-6-headers. 2021-05-16T20:04:30.5244460Z (Reading database ... 2021-05-16T20:04:30.5245010Z (Reading database ... 5% 2021-05-16T20:04:30.5245484Z (Reading database ... 10% 2021-05-16T20:04:30.5246127Z (Reading database ... 15% 2021-05-16T20:04:30.5246576Z (Reading database ... 20% 2021-05-16T20:04:30.5247036Z (Reading database ... 25% 2021-05-16T20:04:30.5247493Z (Reading database ... 30% 2021-05-16T20:04:30.5247933Z (Reading database ... 35% 2021-05-16T20:04:30.5248387Z (Reading database ... 40% 2021-05-16T20:04:30.5248829Z (Reading database ... 45% 2021-05-16T20:04:30.5249283Z (Reading database ... 50% 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Preparing to unpack .../libmagick++-6.q16-8_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-05-16T20:04:30.7323683Z Unpacking libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T20:04:30.7637474Z Selecting previously unselected package libmagick++-6.q16-dev:amd64. 2021-05-16T20:04:30.7905486Z Preparing to unpack .../libmagick++-6.q16-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-05-16T20:04:30.7913728Z Unpacking libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T20:04:30.8614515Z Selecting previously unselected package libmagick++-dev. 2021-05-16T20:04:30.8851818Z Preparing to unpack .../libmagick++-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_all.deb ... 2021-05-16T20:04:30.8923869Z Unpacking libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T20:04:30.9435170Z Setting up libmagick++-6-headers (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T20:04:30.9515520Z Setting up libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T20:04:30.9534133Z Setting up libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T20:04:30.9553090Z Setting up libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T20:04:30.9622206Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:04:32.8127654Z Reading package lists... 2021-05-16T20:04:32.9575063Z Building dependency tree... 2021-05-16T20:04:32.9592839Z Reading state information... 2021-05-16T20:04:33.0971449Z imagemagick is already the newest version (8:6.9.10.23+dfsg-2.1ubuntu11.2). 2021-05-16T20:04:33.0973847Z The following additional packages will be installed: 2021-05-16T20:04:33.0975778Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 libgs9 libgs9-common 2021-05-16T20:04:33.0977135Z libijs-0.35 libjbig2dec0 2021-05-16T20:04:33.0981456Z Suggested packages: 2021-05-16T20:04:33.0982756Z fonts-noto fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre 2021-05-16T20:04:33.0983794Z ghostscript-x 2021-05-16T20:04:33.1419453Z The following NEW packages will be installed: 2021-05-16T20:04:33.1422111Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 ghostscript libgs9 2021-05-16T20:04:33.1427328Z libgs9-common libijs-0.35 libjbig2dec0 2021-05-16T20:04:33.1612851Z 0 upgraded, 8 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:04:33.1613634Z Need to get 11.2 MB of archives. 2021-05-16T20:04:33.1614935Z After this operation, 39.1 MB of additional disk space will be used. 2021-05-16T20:04:33.1616791Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-droid-fallback all 1:6.0.1r16-1.1 [1805 kB] 2021-05-16T20:04:33.1868344Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 fonts-noto-mono all 20200323-1build1~ubuntu20.04.1 [80.6 kB] 2021-05-16T20:04:33.1886958Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-urw-base35 all 20170801.1-3 [6333 kB] 2021-05-16T20:04:33.3043556Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9-common all 9.50~dfsg-5ubuntu4.2 [681 kB] 2021-05-16T20:04:33.3108263Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libijs-0.35 amd64 0.35-15 [15.7 kB] 2021-05-16T20:04:33.3111550Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjbig2dec0 amd64 0.18-1ubuntu1 [60.0 kB] 2021-05-16T20:04:33.3117915Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9 amd64 9.50~dfsg-5ubuntu4.2 [2172 kB] 2021-05-16T20:04:33.3396897Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 ghostscript amd64 9.50~dfsg-5ubuntu4.2 [51.6 kB] 2021-05-16T20:04:33.7276157Z Fetched 11.2 MB in 0s (58.0 MB/s) 2021-05-16T20:04:33.7573557Z Selecting previously unselected package fonts-droid-fallback. 2021-05-16T20:04:33.7648799Z (Reading database ... 2021-05-16T20:04:33.7649588Z (Reading database ... 5% 2021-05-16T20:04:33.7650271Z (Reading 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... 100% 2021-05-16T20:04:33.8722747Z (Reading database ... 267393 files and directories currently installed.) 2021-05-16T20:04:33.8830948Z Preparing to unpack .../0-fonts-droid-fallback_1%3a6.0.1r16-1.1_all.deb ... 2021-05-16T20:04:33.9055943Z Unpacking fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-05-16T20:04:34.0914423Z Selecting previously unselected package fonts-noto-mono. 2021-05-16T20:04:34.1187379Z Preparing to unpack .../1-fonts-noto-mono_20200323-1build1~ubuntu20.04.1_all.deb ... 2021-05-16T20:04:34.1196508Z Unpacking fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-05-16T20:04:34.1505384Z Selecting previously unselected package fonts-urw-base35. 2021-05-16T20:04:34.1744965Z Preparing to unpack .../2-fonts-urw-base35_20170801.1-3_all.deb ... 2021-05-16T20:04:34.2303075Z Unpacking fonts-urw-base35 (20170801.1-3) ... 2021-05-16T20:04:34.5919023Z Selecting previously unselected package libgs9-common. 2021-05-16T20:04:34.6194645Z Preparing to unpack .../3-libgs9-common_9.50~dfsg-5ubuntu4.2_all.deb ... 2021-05-16T20:04:34.6201647Z Unpacking libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-05-16T20:04:34.7097246Z Selecting previously unselected package libijs-0.35:amd64. 2021-05-16T20:04:34.7378000Z Preparing to unpack .../4-libijs-0.35_0.35-15_amd64.deb ... 2021-05-16T20:04:34.7391956Z Unpacking libijs-0.35:amd64 (0.35-15) ... 2021-05-16T20:04:34.7592041Z Selecting previously unselected package libjbig2dec0:amd64. 2021-05-16T20:04:35.6465018Z Preparing to unpack .../5-libjbig2dec0_0.18-1ubuntu1_amd64.deb ... 2021-05-16T20:04:35.6466836Z Unpacking libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-05-16T20:04:35.6467598Z Selecting previously unselected package libgs9:amd64. 2021-05-16T20:04:35.6468605Z Preparing to unpack .../6-libgs9_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-05-16T20:04:35.6469777Z Unpacking libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-05-16T20:04:35.6470524Z Selecting previously unselected package ghostscript. 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2021-05-16T20:04:35.6481499Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T20:04:38.2085855Z Reading package lists... 2021-05-16T20:04:38.3731305Z Building dependency tree... 2021-05-16T20:04:38.3749839Z Reading state information... 2021-05-16T20:04:38.5237446Z The following additional packages will be installed: 2021-05-16T20:04:38.5239634Z libudunits2-0 libudunits2-data 2021-05-16T20:04:38.5685012Z The following NEW packages will be installed: 2021-05-16T20:04:38.5690304Z libudunits2-0 libudunits2-data libudunits2-dev 2021-05-16T20:04:38.5889826Z 0 upgraded, 3 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:04:38.5891187Z Need to get 429 kB of archives. 2021-05-16T20:04:38.5892398Z After this operation, 1026 kB of additional disk space will be used. 2021-05-16T20:04:38.5894426Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-data all 2.2.26-5 [18.8 kB] 2021-05-16T20:04:38.5908592Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-0 amd64 2.2.26-5 [48.9 kB] 2021-05-16T20:04:38.5917002Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-dev amd64 2.2.26-5 [362 kB] 2021-05-16T20:04:38.9810776Z Fetched 429 kB in 0s (16.6 MB/s) 2021-05-16T20:04:39.0095315Z Selecting previously unselected package libudunits2-data. 2021-05-16T20:04:39.0150738Z (Reading database ... 2021-05-16T20:04:39.0151329Z (Reading database ... 5% 2021-05-16T20:04:39.0151804Z (Reading database ... 10% 2021-05-16T20:04:39.0152254Z (Reading database ... 15% 2021-05-16T20:04:39.0152723Z (Reading database ... 20% 2021-05-16T20:04:39.0153167Z (Reading database ... 25% 2021-05-16T20:04:39.0153621Z (Reading database ... 30% 2021-05-16T20:04:39.0154064Z (Reading database ... 35% 2021-05-16T20:04:39.0154520Z (Reading database ... 40% 2021-05-16T20:04:39.0155141Z (Reading database ... 45% 2021-05-16T20:04:39.0155603Z (Reading database ... 50% 2021-05-16T20:04:39.0186952Z (Reading database ... 55% 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(2.2.26-5) ... 2021-05-16T20:04:39.2094395Z Selecting previously unselected package libudunits2-dev:amd64. 2021-05-16T20:04:39.2303007Z Preparing to unpack .../libudunits2-dev_2.2.26-5_amd64.deb ... 2021-05-16T20:04:39.2316193Z Unpacking libudunits2-dev:amd64 (2.2.26-5) ... 2021-05-16T20:04:39.2981274Z Setting up libudunits2-data (2.2.26-5) ... 2021-05-16T20:04:39.3000358Z Setting up libudunits2-0:amd64 (2.2.26-5) ... 2021-05-16T20:04:39.3020208Z Setting up libudunits2-dev:amd64 (2.2.26-5) ... 2021-05-16T20:04:39.3044013Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-16T20:04:39.4023163Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:04:41.2709760Z Reading package lists... 2021-05-16T20:04:41.4096276Z Building dependency tree... 2021-05-16T20:04:41.4113955Z Reading state information... 2021-05-16T20:04:41.5887630Z The following NEW packages will be installed: 2021-05-16T20:04:41.5890268Z libjq-dev 2021-05-16T20:04:41.6127017Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:04:41.6128175Z Need to get 11.2 kB of archives. 2021-05-16T20:04:41.6129417Z After this operation, 47.1 kB of additional disk space will be used. 2021-05-16T20:04:41.6131851Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libjq-dev amd64 1.6-1ubuntu0.20.04.1 [11.2 kB] 2021-05-16T20:04:41.9887821Z Fetched 11.2 kB in 0s (556 kB/s) 2021-05-16T20:04:42.0174935Z Selecting previously unselected package libjq-dev:amd64. 2021-05-16T20:04:42.0245208Z (Reading database ... 2021-05-16T20:04:42.0245991Z (Reading database ... 5% 2021-05-16T20:04:42.0246626Z (Reading database ... 10% 2021-05-16T20:04:42.0247259Z (Reading database ... 15% 2021-05-16T20:04:42.0247887Z (Reading database ... 20% 2021-05-16T20:04:42.0248495Z (Reading database ... 25% 2021-05-16T20:04:42.0249115Z (Reading database ... 30% 2021-05-16T20:04:42.0249721Z (Reading database ... 35% 2021-05-16T20:04:42.0250431Z (Reading database ... 40% 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(1.6-1ubuntu0.20.04.1) ... 2021-05-16T20:04:44.0784437Z Reading package lists... 2021-05-16T20:04:44.2269339Z Building dependency tree... 2021-05-16T20:04:44.2287210Z Reading state information... 2021-05-16T20:04:44.4084877Z The following NEW packages will be installed: 2021-05-16T20:04:44.4087448Z libmng2 2021-05-16T20:04:44.4290678Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:04:44.4291687Z Need to get 168 kB of archives. 2021-05-16T20:04:44.4292732Z After this operation, 571 kB of additional disk space will be used. 2021-05-16T20:04:44.4294735Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmng2 amd64 2.0.3+dfsg-3 [168 kB] 2021-05-16T20:04:44.8057384Z Fetched 168 kB in 0s (8820 kB/s) 2021-05-16T20:04:44.8346112Z Selecting previously unselected package libmng2:amd64. 2021-05-16T20:04:44.8422655Z (Reading database ... 2021-05-16T20:04:44.8423548Z (Reading database ... 5% 2021-05-16T20:04:44.8424077Z (Reading database ... 10% 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2021-05-16T20:04:44.9557953Z (Reading database ... 267992 files and directories currently installed.) 2021-05-16T20:04:44.9671199Z Preparing to unpack .../libmng2_2.0.3+dfsg-3_amd64.deb ... 2021-05-16T20:04:44.9695950Z Unpacking libmng2:amd64 (2.0.3+dfsg-3) ... 2021-05-16T20:04:45.0371840Z Setting up libmng2:amd64 (2.0.3+dfsg-3) ... 2021-05-16T20:04:45.0400804Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:04:46.9072949Z Reading package lists... 2021-05-16T20:04:47.0466642Z Building dependency tree... 2021-05-16T20:04:47.0484170Z Reading state information... 2021-05-16T20:04:47.1606852Z E: Unable to locate package libmng1 2021-05-16T20:04:47.2203029Z Reading package lists... 2021-05-16T20:04:47.3600341Z Building dependency tree... 2021-05-16T20:04:47.3618928Z Reading state information... 2021-05-16T20:04:47.4735282Z E: Unable to locate package libapparmor-devel 2021-05-16T20:04:47.5335421Z Reading package lists... 2021-05-16T20:04:47.6712462Z Building dependency tree... 2021-05-16T20:04:47.6730795Z Reading state information... 2021-05-16T20:04:47.8145809Z The following additional packages will be installed: 2021-05-16T20:04:47.8148588Z libij-java 2021-05-16T20:04:47.8568506Z The following NEW packages will be installed: 2021-05-16T20:04:47.8573529Z imagej libij-java 2021-05-16T20:04:47.8859245Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:04:47.8860103Z Need to get 2328 kB of archives. 2021-05-16T20:04:47.8861013Z After this operation, 2498 kB of additional disk space will be used. 2021-05-16T20:04:47.8862545Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libij-java all 1.52r-1 [2284 kB] 2021-05-16T20:04:47.9659772Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 imagej all 1.52r-1 [43.7 kB] 2021-05-16T20:04:48.3481972Z Fetched 2328 kB in 0s (21.8 MB/s) 2021-05-16T20:04:48.3774691Z Selecting previously unselected package libij-java. 2021-05-16T20:04:48.3839457Z (Reading 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lists... 2021-05-16T20:04:51.9341455Z Building dependency tree... 2021-05-16T20:04:51.9360914Z Reading state information... 2021-05-16T20:04:52.0722792Z Suggested packages: 2021-05-16T20:04:52.0723944Z bowtie2-examples 2021-05-16T20:04:52.1142032Z The following NEW packages will be installed: 2021-05-16T20:04:52.1146816Z bowtie2 2021-05-16T20:04:52.1342287Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:04:52.1343141Z Need to get 1324 kB of archives. 2021-05-16T20:04:52.1343835Z After this operation, 5630 kB of additional disk space will be used. 2021-05-16T20:04:52.1345573Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 bowtie2 amd64 2.3.5.1-6build1 [1324 kB] 2021-05-16T20:04:52.5377590Z Fetched 1324 kB in 0s (35.2 MB/s) 2021-05-16T20:04:52.5652516Z Selecting previously unselected package bowtie2. 2021-05-16T20:04:52.5725193Z (Reading database ... 2021-05-16T20:04:52.5725669Z (Reading database ... 5% 2021-05-16T20:04:52.5726167Z 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package. 2021-05-16T20:04:55.9639143Z This may mean that the package is missing, has been obsoleted, or 2021-05-16T20:04:55.9639793Z is only available from another source 2021-05-16T20:04:55.9640125Z 2021-05-16T20:04:56.0548675Z E: Package 'insighttoolkit4-python' has no installation candidate 2021-05-16T20:04:56.1149902Z Reading package lists... 2021-05-16T20:04:56.2606981Z Building dependency tree... 2021-05-16T20:04:56.2625772Z Reading state information... 2021-05-16T20:04:56.2830045Z Package libav-tools is not available, but is referred to by another package. 2021-05-16T20:04:56.2832926Z This may mean that the package is missing, has been obsoleted, or 2021-05-16T20:04:56.2833919Z is only available from another source 2021-05-16T20:04:56.2834770Z However the following packages replace it: 2021-05-16T20:04:56.2835438Z ffmpeg 2021-05-16T20:04:56.2835828Z 2021-05-16T20:04:56.3747336Z E: Package 'libav-tools' has no installation candidate 2021-05-16T20:04:56.4350367Z Reading package lists... 2021-05-16T20:04:56.5713651Z Building dependency tree... 2021-05-16T20:04:56.5733753Z Reading state information... 2021-05-16T20:04:56.7087021Z The following additional packages will be installed: 2021-05-16T20:04:56.7089361Z libgcrypt20-dev libgit2-28 libgpg-error-dev libhttp-parser-dev 2021-05-16T20:04:56.7091357Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-05-16T20:04:56.7092984Z libssh2-1-dev 2021-05-16T20:04:56.7093861Z Suggested packages: 2021-05-16T20:04:56.7094917Z libgcrypt20-doc libmbedtls-doc 2021-05-16T20:04:56.7515886Z The following NEW packages will be installed: 2021-05-16T20:04:56.7518842Z libgcrypt20-dev libgit2-28 libgit2-dev libgpg-error-dev libhttp-parser-dev 2021-05-16T20:04:56.7522878Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-05-16T20:04:56.7527377Z libssh2-1-dev 2021-05-16T20:04:56.7728691Z 0 upgraded, 11 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:04:56.7729370Z Need to get 2667 kB of archives. 2021-05-16T20:04:56.7730064Z After this operation, 11.2 MB of additional disk space will be used. 2021-05-16T20:04:56.7732179Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgpg-error-dev amd64 1.37-1 [109 kB] 2021-05-16T20:04:56.7769582Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcrypt20-dev amd64 1.8.5-5ubuntu1 [470 kB] 2021-05-16T20:04:56.7856321Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser2.9 amd64 2.9.2-2 [21.8 kB] 2021-05-16T20:04:56.7861998Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedcrypto3 amd64 2.16.4-1ubuntu2 [150 kB] 2021-05-16T20:04:56.7881575Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedx509-0 amd64 2.16.4-1ubuntu2 [42.3 kB] 2021-05-16T20:04:56.7889096Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls12 amd64 2.16.4-1ubuntu2 [71.8 kB] 2021-05-16T20:04:56.7898850Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-28 amd64 0.28.4+dfsg.1-2 [403 kB] 2021-05-16T20:04:56.7951490Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls-dev amd64 2.16.4-1ubuntu2 [444 kB] 2021-05-16T20:04:56.7996049Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libssh2-1-dev amd64 1.8.0-2.1build1 [244 kB] 2021-05-16T20:04:56.8018408Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser-dev amd64 2.9.2-2 [20.2 kB] 2021-05-16T20:04:56.8024393Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-dev amd64 0.28.4+dfsg.1-2 [691 kB] 2021-05-16T20:04:57.1922749Z Fetched 2667 kB in 0s (51.0 MB/s) 2021-05-16T20:04:57.2201931Z Selecting previously unselected package libgpg-error-dev. 2021-05-16T20:04:57.2276153Z (Reading database ... 2021-05-16T20:04:57.2278266Z (Reading database ... 5% 2021-05-16T20:04:57.2279061Z (Reading database 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2021-05-16T20:04:57.3358653Z (Reading database ... 268047 files and directories currently installed.) 2021-05-16T20:04:57.3472947Z Preparing to unpack .../00-libgpg-error-dev_1.37-1_amd64.deb ... 2021-05-16T20:04:57.3484093Z Unpacking libgpg-error-dev (1.37-1) ... 2021-05-16T20:04:57.3854250Z Selecting previously unselected package libgcrypt20-dev. 2021-05-16T20:04:57.4080367Z Preparing to unpack .../01-libgcrypt20-dev_1.8.5-5ubuntu1_amd64.deb ... 2021-05-16T20:04:57.4090424Z Unpacking libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-05-16T20:04:57.4774683Z Selecting previously unselected package libhttp-parser2.9:amd64. 2021-05-16T20:04:57.5022279Z Preparing to unpack .../02-libhttp-parser2.9_2.9.2-2_amd64.deb ... 2021-05-16T20:04:57.5038391Z Unpacking libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-05-16T20:04:57.5293463Z Selecting previously unselected package libmbedcrypto3:amd64. 2021-05-16T20:04:57.5537664Z Preparing to unpack .../03-libmbedcrypto3_2.16.4-1ubuntu2_amd64.deb ... 2021-05-16T20:04:57.5545694Z Unpacking libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T20:04:57.5886173Z Selecting previously unselected package libmbedx509-0:amd64. 2021-05-16T20:04:57.6161144Z Preparing to unpack .../04-libmbedx509-0_2.16.4-1ubuntu2_amd64.deb ... 2021-05-16T20:04:57.6168746Z Unpacking libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T20:04:57.6475656Z Selecting previously unselected package libmbedtls12:amd64. 2021-05-16T20:04:57.6680828Z Preparing to unpack .../05-libmbedtls12_2.16.4-1ubuntu2_amd64.deb ... 2021-05-16T20:04:57.6690933Z Unpacking libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T20:04:57.7014224Z Selecting previously unselected package libgit2-28:amd64. 2021-05-16T20:04:57.7231610Z Preparing to unpack .../06-libgit2-28_0.28.4+dfsg.1-2_amd64.deb ... 2021-05-16T20:04:57.7242009Z Unpacking libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-05-16T20:04:57.7801951Z Selecting previously unselected package libmbedtls-dev:amd64. 2021-05-16T20:04:57.8080069Z Preparing to unpack .../07-libmbedtls-dev_2.16.4-1ubuntu2_amd64.deb ... 2021-05-16T20:04:57.8088261Z Unpacking libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T20:04:57.8774501Z Selecting previously unselected package libssh2-1-dev:amd64. 2021-05-16T20:04:57.8975343Z Preparing to unpack .../08-libssh2-1-dev_1.8.0-2.1build1_amd64.deb ... 2021-05-16T20:04:57.8984403Z Unpacking libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-05-16T20:04:57.9481163Z Selecting previously unselected package libhttp-parser-dev. 2021-05-16T20:04:57.9716602Z Preparing to unpack .../09-libhttp-parser-dev_2.9.2-2_amd64.deb ... 2021-05-16T20:04:57.9724558Z Unpacking libhttp-parser-dev (2.9.2-2) ... 2021-05-16T20:04:57.9974458Z Selecting previously unselected package libgit2-dev:amd64. 2021-05-16T20:04:58.0210092Z Preparing to unpack .../10-libgit2-dev_0.28.4+dfsg.1-2_amd64.deb ... 2021-05-16T20:04:58.0218671Z Unpacking libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-05-16T20:04:58.1389144Z Setting up libgpg-error-dev (1.37-1) ... 2021-05-16T20:04:58.1411245Z Setting up libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T20:04:58.1432178Z Setting up libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-05-16T20:04:58.1455257Z Setting up libhttp-parser-dev (2.9.2-2) ... 2021-05-16T20:04:58.1474750Z Setting up libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T20:04:58.1494756Z Setting up libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T20:04:58.1516559Z Setting up libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T20:04:58.1534704Z Setting up libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-05-16T20:04:58.1551341Z Setting up libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-05-16T20:04:58.1569313Z Setting up libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-05-16T20:04:58.1588786Z Setting up libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-05-16T20:04:58.1611883Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T20:05:02.6584236Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-16T20:05:02.7592576Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:05:04.6432330Z Reading package lists... 2021-05-16T20:05:04.8007285Z Building dependency tree... 2021-05-16T20:05:04.8025939Z Reading state information... 2021-05-16T20:05:05.0308168Z libtiff-dev is already the newest version (4.1.0+git191117-2ubuntu0.20.04.1). 2021-05-16T20:05:05.0309886Z libtiff-dev set to manually installed. 2021-05-16T20:05:05.0315639Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:05:05.0908414Z Reading package lists... 2021-05-16T20:05:05.2337955Z Building dependency tree... 2021-05-16T20:05:05.2355711Z Reading state information... 2021-05-16T20:05:05.4421857Z unixodbc-dev is already the newest version (2.3.7). 2021-05-16T20:05:05.4423166Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:05:05.5023556Z Reading package lists... 2021-05-16T20:05:05.6490369Z Building dependency tree... 2021-05-16T20:05:05.6509138Z Reading state information... 2021-05-16T20:05:05.8346452Z The following NEW packages will be installed: 2021-05-16T20:05:05.8348510Z libsodium-dev 2021-05-16T20:05:05.8614052Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:05:05.8614757Z Need to get 169 kB of archives. 2021-05-16T20:05:05.8615430Z After this operation, 826 kB of additional disk space will be used. 2021-05-16T20:05:05.8617272Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsodium-dev amd64 1.0.18-1 [169 kB] 2021-05-16T20:05:06.2527294Z Fetched 169 kB in 0s (5424 kB/s) 2021-05-16T20:05:06.2855050Z Selecting previously unselected package libsodium-dev:amd64. 2021-05-16T20:05:06.2876133Z (Reading database ... 2021-05-16T20:05:06.2876886Z (Reading database ... 5% 2021-05-16T20:05:06.2877439Z (Reading database ... 10% 2021-05-16T20:05:06.2877986Z (Reading database ... 15% 2021-05-16T20:05:06.2878530Z (Reading database ... 20% 2021-05-16T20:05:06.2879054Z (Reading database ... 25% 2021-05-16T20:05:06.2879596Z (Reading database ... 30% 2021-05-16T20:05:06.2880133Z (Reading database ... 35% 2021-05-16T20:05:06.2880652Z (Reading database ... 40% 2021-05-16T20:05:06.2881200Z (Reading database ... 45% 2021-05-16T20:05:06.2881721Z (Reading database ... 50% 2021-05-16T20:05:06.2922611Z (Reading database ... 55% 2021-05-16T20:05:06.2974061Z (Reading database ... 60% 2021-05-16T20:05:06.2992459Z (Reading database ... 65% 2021-05-16T20:05:06.3107757Z (Reading database ... 70% 2021-05-16T20:05:06.3217354Z (Reading database ... 75% 2021-05-16T20:05:06.3240844Z (Reading database ... 80% 2021-05-16T20:05:06.3728316Z (Reading database ... 85% 2021-05-16T20:05:06.3879375Z (Reading database ... 90% 2021-05-16T20:05:06.3951185Z (Reading database ... 95% 2021-05-16T20:05:06.3951777Z (Reading database ... 100% 2021-05-16T20:05:06.3952595Z (Reading database ... 268550 files and directories currently installed.) 2021-05-16T20:05:06.4057737Z Preparing to unpack .../libsodium-dev_1.0.18-1_amd64.deb ... 2021-05-16T20:05:06.4070341Z Unpacking libsodium-dev:amd64 (1.0.18-1) ... 2021-05-16T20:05:06.4784528Z Setting up libsodium-dev:amd64 (1.0.18-1) ... 2021-05-16T20:05:08.3477862Z Reading package lists... 2021-05-16T20:05:08.5113891Z Building dependency tree... 2021-05-16T20:05:08.5133177Z Reading state information... 2021-05-16T20:05:08.6592824Z The following additional packages will be installed: 2021-05-16T20:05:08.6597349Z libarchive-dev liblept5 libtesseract4 tesseract-ocr tesseract-ocr-osd 2021-05-16T20:05:08.7053828Z The following NEW packages will be installed: 2021-05-16T20:05:08.7060910Z libarchive-dev liblept5 libleptonica-dev libtesseract-dev libtesseract4 2021-05-16T20:05:08.7062341Z tesseract-ocr tesseract-ocr-eng tesseract-ocr-osd 2021-05-16T20:05:08.7247780Z 0 upgraded, 8 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:05:08.7248481Z Need to get 10.4 MB of archives. 2021-05-16T20:05:08.7249178Z After this operation, 38.0 MB of additional disk space will be used. 2021-05-16T20:05:08.7250878Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-dev amd64 3.4.0-2ubuntu1 [490 kB] 2021-05-16T20:05:08.7417892Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblept5 amd64 1.79.0-1 [999 kB] 2021-05-16T20:05:08.7537666Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libleptonica-dev amd64 1.79.0-1 [1389 kB] 2021-05-16T20:05:08.7675102Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract4 amd64 4.1.1-2build2 [1237 kB] 2021-05-16T20:05:08.7762936Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract-dev amd64 4.1.1-2build2 [1463 kB] 2021-05-16T20:05:08.7871731Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-eng all 1:4.00~git30-7274cfa-1 [1598 kB] 2021-05-16T20:05:09.6538913Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-osd all 1:4.00~git30-7274cfa-1 [2990 kB] 2021-05-16T20:05:09.6541669Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr amd64 4.1.1-2build2 [262 kB] 2021-05-16T20:05:09.6543311Z Fetched 10.4 MB in 0s (94.1 MB/s) 2021-05-16T20:05:09.6544441Z Selecting previously unselected package libarchive-dev:amd64. 2021-05-16T20:05:09.6545209Z (Reading database ... 2021-05-16T20:05:09.6545794Z (Reading database ... 5% 2021-05-16T20:05:09.6546367Z (Reading database ... 10% 2021-05-16T20:05:09.6546916Z (Reading database ... 15% 2021-05-16T20:05:09.6547478Z (Reading database ... 20% 2021-05-16T20:05:09.6548075Z (Reading database ... 25% 2021-05-16T20:05:09.6548645Z (Reading database ... 30% 2021-05-16T20:05:09.6549208Z (Reading database ... 35% 2021-05-16T20:05:09.6549755Z (Reading database ... 40% 2021-05-16T20:05:09.6550316Z (Reading database ... 45% 2021-05-16T20:05:09.6550866Z (Reading database 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.../1-liblept5_1.79.0-1_amd64.deb ... 2021-05-16T20:05:09.6562478Z Unpacking liblept5:amd64 (1.79.0-1) ... 2021-05-16T20:05:09.6563504Z Selecting previously unselected package libleptonica-dev:amd64. 2021-05-16T20:05:09.6564654Z Preparing to unpack .../2-libleptonica-dev_1.79.0-1_amd64.deb ... 2021-05-16T20:05:09.6565656Z Unpacking libleptonica-dev:amd64 (1.79.0-1) ... 2021-05-16T20:05:09.7174143Z Selecting previously unselected package libtesseract4:amd64. 2021-05-16T20:05:09.7447694Z Preparing to unpack .../3-libtesseract4_4.1.1-2build2_amd64.deb ... 2021-05-16T20:05:09.7456697Z Unpacking libtesseract4:amd64 (4.1.1-2build2) ... 2021-05-16T20:05:09.8717835Z Selecting previously unselected package libtesseract-dev:amd64. 2021-05-16T20:05:09.8996686Z Preparing to unpack .../4-libtesseract-dev_4.1.1-2build2_amd64.deb ... 2021-05-16T20:05:09.9008677Z Unpacking libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-05-16T20:05:10.0575426Z Selecting previously unselected package tesseract-ocr-eng. 2021-05-16T20:05:10.0831553Z Preparing to unpack .../5-tesseract-ocr-eng_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-05-16T20:05:10.0839589Z Unpacking tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-05-16T20:05:10.2435174Z Selecting previously unselected package tesseract-ocr-osd. 2021-05-16T20:05:10.2651168Z Preparing to unpack .../6-tesseract-ocr-osd_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-05-16T20:05:10.2659151Z Unpacking tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-05-16T20:05:10.5894185Z Selecting previously unselected package tesseract-ocr. 2021-05-16T20:05:10.6113749Z Preparing to unpack .../7-tesseract-ocr_4.1.1-2build2_amd64.deb ... 2021-05-16T20:05:10.6122296Z Unpacking tesseract-ocr (4.1.1-2build2) ... 2021-05-16T20:05:10.6910522Z Setting up tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-05-16T20:05:10.6932650Z Setting up liblept5:amd64 (1.79.0-1) ... 2021-05-16T20:05:10.6953339Z Setting up libleptonica-dev:amd64 (1.79.0-1) ... 2021-05-16T20:05:10.6974277Z Setting up libtesseract4:amd64 (4.1.1-2build2) ... 2021-05-16T20:05:10.6992300Z Setting up libarchive-dev:amd64 (3.4.0-2ubuntu1) ... 2021-05-16T20:05:10.7012578Z Setting up tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-05-16T20:05:10.7028306Z Setting up libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-05-16T20:05:10.7046183Z Setting up tesseract-ocr (4.1.1-2build2) ... 2021-05-16T20:05:10.7066777Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T20:05:13.4178510Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:05:15.2725579Z Reading package lists... 2021-05-16T20:05:15.4144266Z Building dependency tree... 2021-05-16T20:05:15.4162417Z Reading state information... 2021-05-16T20:05:15.6191673Z wget is already the newest version (1.20.3-1ubuntu1). 2021-05-16T20:05:15.6193043Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:05:15.6792490Z Reading package lists... 2021-05-16T20:05:15.8177103Z Building dependency tree... 2021-05-16T20:05:15.8194984Z Reading state information... 2021-05-16T20:05:15.9533654Z The following additional packages will be installed: 2021-05-16T20:05:15.9537168Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-05-16T20:05:15.9539788Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev 2021-05-16T20:05:15.9542870Z Suggested packages: 2021-05-16T20:05:15.9543726Z doc-base krb5-doc krb5-user libnorm-doc 2021-05-16T20:05:15.9999915Z The following NEW packages will be installed: 2021-05-16T20:05:16.0002047Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-05-16T20:05:16.0004179Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev libzmq3-dev 2021-05-16T20:05:16.0379659Z 0 upgraded, 10 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:05:16.0380642Z Need to get 1459 kB of archives. 2021-05-16T20:05:16.0381330Z After this operation, 7754 kB of additional disk space will be used. 2021-05-16T20:05:16.0383855Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgssrpc4 amd64 1.17-6ubuntu4.1 [55.4 kB] 2021-05-16T20:05:16.0410534Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkdb5-9 amd64 1.17-6ubuntu4.1 [37.3 kB] 2021-05-16T20:05:16.0417685Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5srv-mit11 amd64 1.17-6ubuntu4.1 [49.5 kB] 2021-05-16T20:05:16.0426870Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5clnt-mit11 amd64 1.17-6ubuntu4.1 [37.6 kB] 2021-05-16T20:05:16.0435004Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 comerr-dev amd64 2.1-1.45.5-2ubuntu1 [39.9 kB] 2021-05-16T20:05:16.0442116Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 krb5-multidev amd64 1.17-6ubuntu4.1 [120 kB] 2021-05-16T20:05:16.0457533Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnorm-dev amd64 1.5.8+dfsg2-2build1 [463 kB] 2021-05-16T20:05:16.0518172Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpgm-dev amd64 5.2.122~dfsg-3ubuntu1 [189 kB] 2021-05-16T20:05:16.0537142Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkrb5-dev amd64 1.17-6ubuntu4.1 [11.7 kB] 2021-05-16T20:05:16.0542151Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzmq3-dev amd64 4.3.2-2ubuntu1 [455 kB] 2021-05-16T20:05:16.4469074Z Fetched 1459 kB in 0s (27.3 MB/s) 2021-05-16T20:05:16.4774207Z Selecting previously unselected package libgssrpc4:amd64. 2021-05-16T20:05:16.4832574Z (Reading database ... 2021-05-16T20:05:16.4833499Z (Reading database ... 5% 2021-05-16T20:05:16.4834044Z (Reading database ... 10% 2021-05-16T20:05:16.4834512Z (Reading database ... 15% 2021-05-16T20:05:16.4834955Z (Reading database ... 20% 2021-05-16T20:05:16.4835412Z (Reading database ... 25% 2021-05-16T20:05:16.4835873Z (Reading database ... 30% 2021-05-16T20:05:16.4836329Z (Reading database ... 35% 2021-05-16T20:05:16.4836776Z (Reading database ... 40% 2021-05-16T20:05:16.4837228Z (Reading database ... 45% 2021-05-16T20:05:16.4837682Z (Reading database ... 50% 2021-05-16T20:05:16.4863564Z (Reading database ... 55% 2021-05-16T20:05:16.4902872Z (Reading database ... 60% 2021-05-16T20:05:16.4930744Z (Reading database ... 65% 2021-05-16T20:05:16.5041945Z (Reading database ... 70% 2021-05-16T20:05:16.5146119Z (Reading database ... 75% 2021-05-16T20:05:16.5168551Z (Reading database ... 80% 2021-05-16T20:05:16.5527636Z (Reading database ... 85% 2021-05-16T20:05:16.5782260Z (Reading database ... 90% 2021-05-16T20:05:16.5852128Z (Reading database ... 95% 2021-05-16T20:05:16.5855311Z (Reading database ... 100% 2021-05-16T20:05:16.5856139Z (Reading database ... 268845 files and directories currently installed.) 2021-05-16T20:05:16.5965772Z Preparing to unpack .../0-libgssrpc4_1.17-6ubuntu4.1_amd64.deb ... 2021-05-16T20:05:16.5980620Z Unpacking libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T20:05:16.6293701Z Selecting previously unselected package libkdb5-9:amd64. 2021-05-16T20:05:16.6502804Z Preparing to unpack .../1-libkdb5-9_1.17-6ubuntu4.1_amd64.deb ... 2021-05-16T20:05:16.6511401Z Unpacking libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T20:05:16.6813739Z Selecting previously unselected package libkadm5srv-mit11:amd64. 2021-05-16T20:05:16.7005372Z Preparing to unpack .../2-libkadm5srv-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-05-16T20:05:16.7013958Z Unpacking libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T20:05:16.7333640Z Selecting previously unselected package libkadm5clnt-mit11:amd64. 2021-05-16T20:05:16.7528164Z Preparing to unpack .../3-libkadm5clnt-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-05-16T20:05:16.7535670Z Unpacking libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T20:05:16.7813699Z Selecting previously unselected package comerr-dev:amd64. 2021-05-16T20:05:16.8043602Z Preparing to unpack .../4-comerr-dev_2.1-1.45.5-2ubuntu1_amd64.deb ... 2021-05-16T20:05:16.8074503Z Unpacking comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-05-16T20:05:16.8374774Z Selecting previously unselected package krb5-multidev:amd64. 2021-05-16T20:05:16.8583580Z Preparing to unpack .../5-krb5-multidev_1.17-6ubuntu4.1_amd64.deb ... 2021-05-16T20:05:16.8593762Z Unpacking krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T20:05:16.8969509Z Selecting previously unselected package libnorm-dev:amd64. 2021-05-16T20:05:16.9191269Z Preparing to unpack .../6-libnorm-dev_1.5.8+dfsg2-2build1_amd64.deb ... 2021-05-16T20:05:16.9198584Z Unpacking libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-05-16T20:05:16.9933913Z Selecting previously unselected package libpgm-dev:amd64. 2021-05-16T20:05:17.0146716Z Preparing to unpack .../7-libpgm-dev_5.2.122~dfsg-3ubuntu1_amd64.deb ... 2021-05-16T20:05:17.0154488Z Unpacking libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-05-16T20:05:17.0573879Z Selecting previously unselected package libkrb5-dev:amd64. 2021-05-16T20:05:17.0797726Z Preparing to unpack .../8-libkrb5-dev_1.17-6ubuntu4.1_amd64.deb ... 2021-05-16T20:05:17.0804829Z Unpacking libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T20:05:17.1066825Z Selecting previously unselected package libzmq3-dev:amd64. 2021-05-16T20:05:17.1298562Z Preparing to unpack .../9-libzmq3-dev_4.3.2-2ubuntu1_amd64.deb ... 2021-05-16T20:05:17.1307826Z Unpacking libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-05-16T20:05:17.2278574Z Setting up libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-05-16T20:05:17.2300021Z Setting up libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T20:05:17.2318433Z Setting up libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-05-16T20:05:17.2336429Z Setting up comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-05-16T20:05:17.2369967Z Setting up libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T20:05:17.2387928Z Setting up libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T20:05:17.2406837Z Setting up libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T20:05:17.2423521Z Setting up krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T20:05:17.2448851Z Setting up libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T20:05:17.2465086Z Setting up libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-05-16T20:05:17.2497380Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:05:17.2683171Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T20:05:20.1786017Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-16T20:05:22.1374459Z Reading package lists... 2021-05-16T20:05:22.2816116Z Building dependency tree... 2021-05-16T20:05:22.2834082Z Reading state information... 2021-05-16T20:05:22.3953674Z E: Unable to locate package udunits 2021-05-16T20:05:22.4555930Z Reading package lists... 2021-05-16T20:05:22.5960567Z Building dependency tree... 2021-05-16T20:05:22.5978608Z Reading state information... 2021-05-16T20:05:22.7304250Z The following additional packages will be installed: 2021-05-16T20:05:22.7305682Z libwebpdemux2 2021-05-16T20:05:22.7728034Z The following NEW packages will be installed: 2021-05-16T20:05:22.7729883Z libwebp-dev libwebpdemux2 2021-05-16T20:05:22.8075968Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:05:22.8077126Z Need to get 277 kB of archives. 2021-05-16T20:05:22.8078204Z After this operation, 965 kB of additional disk space will be used. 2021-05-16T20:05:22.8080245Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwebpdemux2 amd64 0.6.1-2 [9472 B] 2021-05-16T20:05:22.8130538Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwebp-dev amd64 0.6.1-2 [267 kB] 2021-05-16T20:05:23.2141818Z Fetched 277 kB in 0s (5518 kB/s) 2021-05-16T20:05:23.2438291Z Selecting previously unselected package libwebpdemux2:amd64. 2021-05-16T20:05:23.2513946Z (Reading database ... 2021-05-16T20:05:23.2514757Z (Reading database ... 5% 2021-05-16T20:05:23.2515387Z (Reading 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... 100% 2021-05-16T20:05:23.3669892Z (Reading database ... 269145 files and directories currently installed.) 2021-05-16T20:05:23.3795744Z Preparing to unpack .../libwebpdemux2_0.6.1-2_amd64.deb ... 2021-05-16T20:05:23.3810628Z Unpacking libwebpdemux2:amd64 (0.6.1-2) ... 2021-05-16T20:05:23.4054917Z Selecting previously unselected package libwebp-dev:amd64. 2021-05-16T20:05:23.4304302Z Preparing to unpack .../libwebp-dev_0.6.1-2_amd64.deb ... 2021-05-16T20:05:23.4311849Z Unpacking libwebp-dev:amd64 (0.6.1-2) ... 2021-05-16T20:05:23.5086722Z Setting up libwebpdemux2:amd64 (0.6.1-2) ... 2021-05-16T20:05:23.5116361Z Setting up libwebp-dev:amd64 (0.6.1-2) ... 2021-05-16T20:05:23.5139136Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:05:25.3693096Z Reading package lists... 2021-05-16T20:05:25.5154762Z Building dependency tree... 2021-05-16T20:05:25.5174153Z Reading state information... 2021-05-16T20:05:25.6594597Z The following additional packages will be installed: 2021-05-16T20:05:25.6597488Z gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-05-16T20:05:25.6599000Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-05-16T20:05:25.6600584Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-05-16T20:05:25.6606224Z Suggested packages: 2021-05-16T20:05:25.6607354Z cargo-doc gdb-doc gdbserver rust-doc rust-src 2021-05-16T20:05:25.6608959Z Recommended packages: 2021-05-16T20:05:25.6609612Z cargo 2021-05-16T20:05:25.7082241Z The following NEW packages will be installed: 2021-05-16T20:05:25.7086933Z cargo gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-05-16T20:05:25.7088550Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-05-16T20:05:25.7089898Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-05-16T20:05:25.7326267Z 0 upgraded, 13 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:05:25.7327259Z Need to get 108 MB of archives. 2021-05-16T20:05:25.7328990Z After this operation, 501 MB of additional disk space will be used. 2021-05-16T20:05:25.7330650Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libbabeltrace1 amd64 1.5.8-1build1 [156 kB] 2021-05-16T20:05:25.7390345Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libipt2 amd64 2.0.1-1 [42.8 kB] 2021-05-16T20:05:25.7398189Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight-common all 3.1.8-1.2build5 [50.7 kB] 2021-05-16T20:05:25.7404780Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libboost-regex1.71.0 amd64 1.71.0-6ubuntu6 [471 kB] 2021-05-16T20:05:25.7460451Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight4v5 amd64 3.1.8-1.2build5 [232 kB] 2021-05-16T20:05:25.7482619Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxxhash0 amd64 0.7.3-1 [15.3 kB] 2021-05-16T20:05:25.7487820Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-1.47 amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [59.6 MB] 2021-05-16T20:05:25.8868782Z Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal/main amd64 gdb amd64 10.2-0ubuntu1~20.04~1 [3282 kB] 2021-05-16T20:05:27.2255717Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-dev amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [28.5 MB] 2021-05-16T20:05:27.7102261Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rustc amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [1921 kB] 2021-05-16T20:05:27.7323118Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 cargo amd64 0.47.0-1~exp1ubuntu1~20.04.1 [3147 kB] 2021-05-16T20:05:27.7644049Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libc6-dbg amd64 2.31-0ubuntu9.2 [10.5 MB] 2021-05-16T20:05:27.9287289Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rust-gdb all 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [27.5 kB] 2021-05-16T20:05:28.3190698Z Fetched 108 MB in 2s (48.7 MB/s) 2021-05-16T20:05:28.3494201Z Selecting previously unselected package libbabeltrace1:amd64. 2021-05-16T20:05:28.3559725Z (Reading database ... 2021-05-16T20:05:28.3560659Z (Reading database ... 5% 2021-05-16T20:05:28.3561413Z (Reading database ... 10% 2021-05-16T20:05:28.3561865Z (Reading database ... 15% 2021-05-16T20:05:28.3562321Z (Reading database ... 20% 2021-05-16T20:05:28.3562767Z (Reading database ... 25% 2021-05-16T20:05:28.3563220Z (Reading database ... 30% 2021-05-16T20:05:28.3563659Z (Reading database ... 35% 2021-05-16T20:05:28.3564119Z (Reading database ... 40% 2021-05-16T20:05:28.3564572Z (Reading database ... 45% 2021-05-16T20:05:28.3565008Z (Reading database ... 50% 2021-05-16T20:05:28.3605186Z (Reading database ... 55% 2021-05-16T20:05:28.3645493Z (Reading database ... 60% 2021-05-16T20:05:28.3675090Z (Reading database ... 65% 2021-05-16T20:05:28.3789669Z (Reading database ... 70% 2021-05-16T20:05:28.3899016Z (Reading database ... 75% 2021-05-16T20:05:28.3923420Z (Reading database ... 80% 2021-05-16T20:05:28.4287462Z (Reading database ... 85% 2021-05-16T20:05:28.4569623Z (Reading database ... 90% 2021-05-16T20:05:28.4642012Z (Reading database ... 95% 2021-05-16T20:05:28.4642843Z (Reading database ... 100% 2021-05-16T20:05:28.4643815Z (Reading database ... 269173 files and directories currently installed.) 2021-05-16T20:05:28.4757897Z Preparing to unpack .../00-libbabeltrace1_1.5.8-1build1_amd64.deb ... 2021-05-16T20:05:28.4774416Z Unpacking libbabeltrace1:amd64 (1.5.8-1build1) ... 2021-05-16T20:05:28.5129480Z Selecting previously unselected package libipt2. 2021-05-16T20:05:28.5395339Z Preparing to unpack .../01-libipt2_2.0.1-1_amd64.deb ... 2021-05-16T20:05:28.5401716Z Unpacking libipt2 (2.0.1-1) ... 2021-05-16T20:05:28.5693836Z Selecting previously unselected package libsource-highlight-common. 2021-05-16T20:05:28.5898996Z Preparing to unpack .../02-libsource-highlight-common_3.1.8-1.2build5_all.deb ... 2021-05-16T20:05:28.5912453Z Unpacking libsource-highlight-common (3.1.8-1.2build5) ... 2021-05-16T20:05:28.6330243Z Selecting previously unselected package libboost-regex1.71.0:amd64. 2021-05-16T20:05:28.6560996Z Preparing to unpack .../03-libboost-regex1.71.0_1.71.0-6ubuntu6_amd64.deb ... 2021-05-16T20:05:28.6572922Z Unpacking libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-05-16T20:05:28.7253992Z Selecting previously unselected package libsource-highlight4v5. 2021-05-16T20:05:28.7484087Z Preparing to unpack .../04-libsource-highlight4v5_3.1.8-1.2build5_amd64.deb ... 2021-05-16T20:05:28.7491313Z Unpacking libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-05-16T20:05:28.7898227Z Selecting previously unselected package libxxhash0:amd64. 2021-05-16T20:05:28.8168267Z Preparing to unpack .../05-libxxhash0_0.7.3-1_amd64.deb ... 2021-05-16T20:05:28.8177010Z Unpacking libxxhash0:amd64 (0.7.3-1) ... 2021-05-16T20:05:28.8413871Z Selecting previously unselected package gdb. 2021-05-16T20:05:28.8670428Z Preparing to unpack .../06-gdb_10.2-0ubuntu1~20.04~1_amd64.deb ... 2021-05-16T20:05:28.8678732Z Unpacking gdb (10.2-0ubuntu1~20.04~1) ... 2021-05-16T20:05:29.1695180Z Selecting previously unselected package libstd-rust-1.47:amd64. 2021-05-16T20:05:29.1922797Z Preparing to unpack .../07-libstd-rust-1.47_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-05-16T20:05:29.1933206Z Unpacking libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T20:05:34.8727821Z Selecting previously unselected package libstd-rust-dev:amd64. 2021-05-16T20:05:34.9006213Z Preparing to unpack .../08-libstd-rust-dev_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-05-16T20:05:34.9012901Z Unpacking libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T20:05:37.7854620Z Selecting previously unselected package rustc. 2021-05-16T20:05:37.8047848Z Preparing to unpack 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libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T20:05:39.5201465Z Setting up libsource-highlight-common (3.1.8-1.2build5) ... 2021-05-16T20:05:39.5219045Z Setting up libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-05-16T20:05:39.5236352Z Setting up libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T20:05:39.5255585Z Setting up libipt2 (2.0.1-1) ... 2021-05-16T20:05:39.5275047Z Setting up libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-05-16T20:05:39.5291535Z Setting up libbabeltrace1:amd64 (1.5.8-1build1) ... 2021-05-16T20:05:39.5308397Z Setting up rustc (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T20:05:39.5326349Z Setting up libxxhash0:amd64 (0.7.3-1) ... 2021-05-16T20:05:39.5345012Z Setting up libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-05-16T20:05:39.5368724Z Setting up cargo (0.47.0-1~exp1ubuntu1~20.04.1) ... 2021-05-16T20:05:39.5386225Z Setting up gdb (10.2-0ubuntu1~20.04~1) ... 2021-05-16T20:05:39.5410096Z Setting up rust-gdb (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T20:05:39.5433531Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:05:39.5630175Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T20:05:42.5270258Z Reading package lists... 2021-05-16T20:05:42.6805521Z Building dependency tree... 2021-05-16T20:05:42.6823858Z Reading state information... 2021-05-16T20:05:42.8284155Z The following additional packages will be installed: 2021-05-16T20:05:42.8287657Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-05-16T20:05:42.8292126Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-05-16T20:05:42.8293757Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-05-16T20:05:42.8296292Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-05-16T20:05:42.8297729Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-05-16T20:05:42.8299084Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-05-16T20:05:42.8300341Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-05-16T20:05:42.8301768Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-05-16T20:05:42.8303226Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-05-16T20:05:42.8304616Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-05-16T20:05:42.8306331Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-05-16T20:05:42.8307799Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-05-16T20:05:42.8309305Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-05-16T20:05:42.8310976Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-05-16T20:05:42.8312593Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-05-16T20:05:42.8314101Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-05-16T20:05:42.8316613Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-05-16T20:05:42.8318078Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-05-16T20:05:42.8319625Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-05-16T20:05:42.8320874Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-05-16T20:05:42.8322083Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-05-16T20:05:42.8323496Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-05-16T20:05:42.8324749Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-05-16T20:05:42.8325746Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-05-16T20:05:42.8326748Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-05-16T20:05:42.8327986Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-05-16T20:05:42.8329206Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-05-16T20:05:42.8330470Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-05-16T20:05:42.8331752Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-05-16T20:05:42.8333019Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-05-16T20:05:42.8334154Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-05-16T20:05:42.8335240Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-05-16T20:05:42.8336420Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-05-16T20:05:42.8337637Z python3-cycler python3-dateutil python3-decorator python3-future 2021-05-16T20:05:42.8338960Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-05-16T20:05:42.8340279Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-05-16T20:05:42.8341507Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-05-16T20:05:42.8342710Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-05-16T20:05:42.8343858Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-05-16T20:05:42.8345117Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-05-16T20:05:42.8346394Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-05-16T20:05:42.8347548Z python3-webencodings qdoc-qt5 qgis-common qgis-plugin-grass 2021-05-16T20:05:42.8348719Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-05-16T20:05:42.8350090Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-05-16T20:05:42.8351529Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-05-16T20:05:42.8352750Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-05-16T20:05:42.8353955Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-05-16T20:05:42.8355275Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-05-16T20:05:42.8356374Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-05-16T20:05:42.8357070Z Suggested packages: 2021-05-16T20:05:42.8357984Z avahi-autoipd blt-demo libgdal-grass grass-dev grass-gui e00compr avce00 2021-05-16T20:05:42.8359121Z gnuplot gpsbabel gpstrans netpbm python3-rpy2 python3-termcolor grass 2021-05-16T20:05:42.8360426Z grass-dev-doc gvfs exiv2 geotiff-bin libgeotiff-epsg libvisual-0.4-plugins 2021-05-16T20:05:42.8361717Z libhdf4-doc libhdf4-alt-dev hdf4-tools libjs-jquery-ui-docs avahi-autoipd 2021-05-16T20:05:42.8362820Z | zeroconf ogdi-bin pcscd libqscintilla2-doc qtwayland5 2021-05-16T20:05:42.8363984Z qt5-qmltooling-plugins pinentry-doc python-cycler-doc python-future-doc 2021-05-16T20:05:42.8365239Z python3-genshi python3-lxml-dbg python-lxml-doc dvipng gir1.2-gtk-3.0 2021-05-16T20:05:42.8366477Z inkscape ipython3 python-matplotlib-doc python3-cairocffi python3-gi-cairo 2021-05-16T20:05:42.8367659Z python3-gobject python3-nose python3-scipy python3-tornado 2021-05-16T20:05:42.8368854Z texlive-extra-utils texlive-latex-extra ttf-staypuft python-numpy-doc 2021-05-16T20:05:42.8370180Z python3-pytest python3-numpy-dbg owslib-doc python-pil-doc python3-pil-dbg 2021-05-16T20:05:42.8371525Z python3-pandas python3-ipykernel python-psycopg2-doc python-pyparsing-doc 2021-05-16T20:05:42.8372873Z python3-pyqt5-dbg otb-qgis saga tix python3-tk-dbg qt5-doc comgt wvdial 2021-05-16T20:05:42.8373918Z wpagui libengine-pkcs11-openssl 2021-05-16T20:05:42.9131346Z The following NEW packages will be installed: 2021-05-16T20:05:42.9133814Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-05-16T20:05:42.9135558Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-05-16T20:05:42.9137275Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-05-16T20:05:42.9138880Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-05-16T20:05:42.9140539Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-05-16T20:05:42.9142118Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-05-16T20:05:42.9143597Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-05-16T20:05:42.9145256Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-05-16T20:05:42.9146944Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-05-16T20:05:42.9148564Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-05-16T20:05:42.9150202Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-05-16T20:05:42.9151864Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-05-16T20:05:42.9153604Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-05-16T20:05:42.9156496Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-05-16T20:05:42.9158120Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-05-16T20:05:42.9159632Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-05-16T20:05:42.9161092Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-05-16T20:05:42.9162580Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-05-16T20:05:42.9164117Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-05-16T20:05:42.9165367Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-05-16T20:05:42.9166566Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-05-16T20:05:42.9167860Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-05-16T20:05:42.9169059Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-05-16T20:05:42.9170205Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-05-16T20:05:42.9171385Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-05-16T20:05:42.9172971Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-05-16T20:05:42.9174407Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-05-16T20:05:42.9175845Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-05-16T20:05:42.9177563Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-05-16T20:05:42.9178958Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-05-16T20:05:42.9180233Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-05-16T20:05:42.9181502Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-05-16T20:05:42.9182866Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-05-16T20:05:42.9184272Z python3-cycler python3-dateutil python3-decorator python3-future 2021-05-16T20:05:42.9185772Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-05-16T20:05:42.9187289Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-05-16T20:05:42.9188711Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-05-16T20:05:42.9190079Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-05-16T20:05:42.9191417Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-05-16T20:05:42.9192952Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-05-16T20:05:42.9194414Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-05-16T20:05:42.9195760Z python3-webencodings qdoc-qt5 qgis qgis-common qgis-plugin-grass 2021-05-16T20:05:42.9197166Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-05-16T20:05:42.9198763Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-05-16T20:05:42.9200396Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-05-16T20:05:42.9201821Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-05-16T20:05:42.9203208Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-05-16T20:05:42.9204741Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-05-16T20:05:42.9206021Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-05-16T20:05:42.9488213Z 0 upgraded, 214 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:05:42.9489299Z Need to get 183 MB of archives. 2021-05-16T20:05:42.9490594Z After this operation, 776 MB of additional disk space will be used. 2021-05-16T20:05:42.9492864Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdouble-conversion3 amd64 3.1.5-4ubuntu1 [37.9 kB] 2021-05-16T20:05:42.9575118Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5core5a amd64 5.12.8+dfsg-0ubuntu1 [2005 kB] 2021-05-16T20:05:43.0245270Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl-mesa0 amd64 20.2.6-0ubuntu0.20.04.1 [97.7 kB] 2021-05-16T20:05:43.0307099Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl1 amd64 1.3.2-1~ubuntu0.20.04.1 [31.9 kB] 2021-05-16T20:05:43.0360817Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libevdev2 amd64 1.9.0+dfsg-1ubuntu0.1 [31.6 kB] 2021-05-16T20:05:43.0427390Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmtdev1 amd64 1.1.5-1.1 [14.2 kB] 2021-05-16T20:05:43.0478105Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-common all 1.3-2ubuntu3 [45.3 kB] 2021-05-16T20:05:43.0560894Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom2 amd64 1.3-2ubuntu3 [20.0 kB] 2021-05-16T20:05:43.0625039Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput-bin amd64 1.15.5-1ubuntu0.2 [19.1 kB] 2021-05-16T20:05:43.0714755Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput10 amd64 1.15.5-1ubuntu0.2 [112 kB] 2021-05-16T20:05:43.0822209Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5dbus5 amd64 5.12.8+dfsg-0ubuntu1 [208 kB] 2021-05-16T20:05:43.0965152Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5network5 amd64 5.12.8+dfsg-0ubuntu1 [674 kB] 2021-05-16T20:05:43.1274841Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [10.8 kB] 2021-05-16T20:05:43.1312386Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-util1 amd64 0.4.0-0ubuntu3 [11.2 kB] 2021-05-16T20:05:43.1354521Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-image0 amd64 0.4.0-1build1 [12.3 kB] 2021-05-16T20:05:43.1394589Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-keysyms1 amd64 0.4.0-1build1 [8452 B] 2021-05-16T20:05:43.1618699Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-randr0 amd64 1.14-2 [16.3 kB] 2021-05-16T20:05:43.1889392Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-render-util0 amd64 0.3.9-1build1 [9912 B] 2021-05-16T20:05:43.1937464Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinerama0 amd64 1.14-2 [5260 B] 2021-05-16T20:05:43.1977700Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinput0 amd64 1.14-2 [29.3 kB] 2021-05-16T20:05:43.2048536Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xkb1 amd64 1.14-2 [29.6 kB] 2021-05-16T20:05:43.2116277Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxkbcommon-x11-0 amd64 0.10.0-1 [13.4 kB] 2021-05-16T20:05:43.2164932Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5gui5 amd64 5.12.8+dfsg-0ubuntu1 [2971 kB] 2021-05-16T20:05:43.3354998Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5widgets5 amd64 5.12.8+dfsg-0ubuntu1 [2293 kB] 2021-05-16T20:05:43.4189329Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5svg5 amd64 5.12.8-0ubuntu1 [131 kB] 2021-05-16T20:05:43.4277123Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liborc-0.4-0 amd64 1:0.4.31-1 [188 kB] 2021-05-16T20:05:43.4351305Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgstreamer-plugins-base1.0-0 amd64 1.16.2-4 [735 kB] 2021-05-16T20:05:43.4669480Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhyphen0 amd64 2.8.8-7 [27.0 kB] 2021-05-16T20:05:43.4751553Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5positioning5 amd64 5.12.8+dfsg-0ubuntu1 [197 kB] 2021-05-16T20:05:43.4911124Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5printsupport5 amd64 5.12.8+dfsg-0ubuntu1 [193 kB] 2021-05-16T20:05:43.5070715Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5qml5 amd64 5.12.8-0ubuntu1 [1438 kB] 2021-05-16T20:05:43.5610933Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quick5 amd64 5.12.8-0ubuntu1 [1335 kB] 2021-05-16T20:05:43.6191987Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sensors5 amd64 5.12.8-0ubuntu1 [114 kB] 2021-05-16T20:05:43.6333213Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webchannel5 amd64 5.12.8-0ubuntu1 [51.2 kB] 2021-05-16T20:05:43.6370279Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwoff1 amd64 1.0.2-1build2 [42.0 kB] 2021-05-16T20:05:43.6428338Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webkit5 amd64 5.212.0~alpha4-1ubuntu2 [12.1 MB] 2021-05-16T20:05:44.0748449Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-image-formats-plugins amd64 5.12.8-0ubuntu1 [43.4 kB] 2021-05-16T20:05:44.0788361Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers-common all 3.10.4+dfsg-1ubuntu2 [897 kB] 2021-05-16T20:05:44.1178430Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2 amd64 2.2.1-2build1 [307 kB] 2021-05-16T20:05:44.1448212Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2-plugins amd64 2.2.1-2build1 [191 kB] 2021-05-16T20:05:44.1615945Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5 amd64 5.12.8+dfsg-0ubuntu1 [121 kB] 2021-05-16T20:05:44.1831552Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5-sqlite amd64 5.12.8+dfsg-0ubuntu1 [47.5 kB] 2021-05-16T20:05:44.1908664Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-data all 3.0.4+dfsg-1build3 [186 kB] 2021-05-16T20:05:44.2090330Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarpack2 amd64 3.7.0-3 [92.8 kB] 2021-05-16T20:05:44.2177934Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsuperlu5 amd64 5.2.1+dfsg1-4 [159 kB] 2021-05-16T20:05:44.2316997Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarmadillo9 amd64 1:9.800.4+dfsg-1build1 [93.2 kB] 2021-05-16T20:05:44.2408818Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcfitsio8 amd64 3.470-3 [466 kB] 2021-05-16T20:05:44.2621810Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcharls2 amd64 2.0.0+dfsg-1build1 [74.1 kB] 2021-05-16T20:05:44.2722189Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdap25 amd64 3.20.5-1 [435 kB] 2021-05-16T20:05:44.2948978Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdapclient6v5 amd64 3.20.5-1 [92.2 kB] 2021-05-16T20:05:44.3060859Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libepsilon1 amd64 0.9.2+dfsg-4 [41.0 kB] 2021-05-16T20:05:44.3141216Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfreexl1 amd64 1.0.5-3 [33.4 kB] 2021-05-16T20:05:44.3217356Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfyba0 amd64 4.1.1-6build1 [113 kB] 2021-05-16T20:05:44.3322497Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-3.8.0 amd64 3.8.0-1build1 [535 kB] 2021-05-16T20:05:44.3575074Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-c1v5 amd64 3.8.0-1build1 [69.9 kB] 2021-05-16T20:05:44.3713141Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-data all 6.3.1-1 [7647 kB] 2021-05-16T20:05:44.6397367Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libproj15 amd64 6.3.1-1 [925 kB] 2021-05-16T20:05:44.6828527Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeotiff5 amd64 1.5.1-2 [53.1 kB] 2021-05-16T20:05:44.6930558Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf4-0-alt amd64 4.2.14-1ubuntu1 [268 kB] 2021-05-16T20:05:44.7101302Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libminizip1 amd64 1.1-8build1 [20.2 kB] 2021-05-16T20:05:44.7166740Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liburiparser1 amd64 0.9.3-2 [39.3 kB] 2021-05-16T20:05:44.7238629Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlbase1 amd64 1.3.0-8build1 [45.4 kB] 2021-05-16T20:05:44.7319197Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmldom1 amd64 1.3.0-8build1 [152 kB] 2021-05-16T20:05:44.7431781Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlengine1 amd64 1.3.0-8build1 [72.5 kB] 2021-05-16T20:05:44.7558727Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnetcdf15 amd64 1:4.7.3-1 [341 kB] 2021-05-16T20:05:44.7743347Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libogdi4.1 amd64 4.1.0+ds-1build1 [198 kB] 2021-05-16T20:05:44.7872791Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqhull7 amd64 2015.2-4 [152 kB] 2021-05-16T20:05:44.8001484Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialite7 amd64 4.3.0a-6build1 [1286 kB] 2021-05-16T20:05:44.8496249Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxerces-c3.2 amd64 3.2.2+debian-1build3 [878 kB] 2021-05-16T20:05:44.8887821Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgdal26 amd64 3.0.4+dfsg-1build3 [6156 kB] 2021-05-16T20:05:45.1538367Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5concurrent5 amd64 5.12.8+dfsg-0ubuntu1 [33.5 kB] 2021-05-16T20:05:45.1592639Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5keychain1 amd64 0.10.0-1build1 [48.4 kB] 2021-05-16T20:05:45.1672200Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5serialport5 amd64 5.12.8-0ubuntu1 [33.1 kB] 2021-05-16T20:05:45.1742266Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5xml5 amd64 5.12.8+dfsg-0ubuntu1 [105 kB] 2021-05-16T20:05:45.1824632Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialindex6 amd64 1.9.3-1build1 [266 kB] 2021-05-16T20:05:45.2032511Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzip5 amd64 1.5.1-0ubuntu1 [46.7 kB] 2021-05-16T20:05:45.2113951Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-core3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [5216 kB] 2021-05-16T20:05:45.4194069Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-native3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [44.5 kB] 2021-05-16T20:05:45.4259482Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-l10n all 2.11.2+dfsg-6 [41.3 kB] 2021-05-16T20:05:45.4329779Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-15 amd64 2.11.2+dfsg-6 [1238 kB] 2021-05-16T20:05:45.4835238Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quickwidgets5 amd64 5.12.8-0ubuntu1 [39.8 kB] 2021-05-16T20:05:45.5353169Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5opengl5 amd64 5.12.8+dfsg-0ubuntu1 [136 kB] 2021-05-16T20:05:45.5478311Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqwt-qt5-6 amd64 6.1.4-1.1build1 [427 kB] 2021-05-16T20:05:45.5681670Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-gui3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3195 kB] 2021-05-16T20:05:45.6871078Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers amd64 3.10.4+dfsg-1ubuntu2 [1940 kB] 2021-05-16T20:05:45.7787731Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-core7 amd64 0.7-4ubuntu7 [81.7 kB] 2021-05-16T20:05:45.7886115Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdaemon0 amd64 0.14-7 [13.9 kB] 2021-05-16T20:05:45.7939833Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 avahi-daemon amd64 0.7-4ubuntu7 [61.0 kB] 2021-05-16T20:05:45.7987009Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4 [572 kB] 2021-05-16T20:05:45.8144678Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 blt amd64 2.5.3+dfsg-4 [4944 B] 2021-05-16T20:05:45.8196880Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 fonts-lyx all 2.3.4.2-2 [154 kB] 2021-05-16T20:05:45.8336866Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgck-1-0 amd64 3.36.0-2build1 [75.5 kB] 2021-05-16T20:05:45.8566369Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-base-3-1 amd64 3.36.0-2build1 [193 kB] 2021-05-16T20:05:45.8699694Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-ui-3-1 amd64 3.36.0-2build1 [127 kB] 2021-05-16T20:05:45.8819657Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gcr amd64 3.36.0-2build1 [63.9 kB] 2021-05-16T20:05:45.8907154Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-numpy amd64 1:1.17.4-5ubuntu3 [2725 kB] 2021-05-16T20:05:45.9898780Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-gdal amd64 3.0.4+dfsg-1build3 [527 kB] 2021-05-16T20:05:46.0151444Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-bin amd64 3.0.4+dfsg-1build3 [256 kB] 2021-05-16T20:05:46.0312489Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-glib1 amd64 0.7-4ubuntu7 [7804 B] 2021-05-16T20:05:46.0353679Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmm-glib0 amd64 1.12.8-1 [185 kB] 2021-05-16T20:05:46.0519835Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 geoclue-2.0 amd64 2.5.6-0ubuntu1 [91.9 kB] 2021-05-16T20:05:46.0589351Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit-modules amd64 0.23.20-1ubuntu0.1 [231 kB] 2021-05-16T20:05:46.0661236Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit amd64 0.23.20-1ubuntu0.1 [93.8 kB] 2021-05-16T20:05:46.0703318Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 pinentry-gnome3 amd64 1.1.0-3build1 [38.6 kB] 2021-05-16T20:05:46.0731298Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring amd64 3.36.0-1ubuntu1 [613 kB] 2021-05-16T20:05:46.0877574Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring-pkcs11 amd64 3.36.0-1ubuntu1 [28.0 kB] 2021-05-16T20:05:46.0885272Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-doc all 7.8.2-1build3 [32.4 MB] 2021-05-16T20:05:47.0781630Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblaszip8 amd64 3.4.3-1build1 [125 kB] 2021-05-16T20:05:47.0796797Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-util9 amd64 2.0.1+ds-1build3 [68.5 kB] 2021-05-16T20:05:47.0843788Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-base9 amd64 2.0.1+ds-1build3 [1739 kB] 2021-05-16T20:05:47.1239277Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-core amd64 7.8.2-1build3 [5737 kB] 2021-05-16T20:05:47.2626878Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdparanoia0 amd64 3.10.2+debian-13 [46.7 kB] 2021-05-16T20:05:47.2631544Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvisual-0.4-0 amd64 0.4.0-17 [99.8 kB] 2021-05-16T20:05:47.2646695Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gstreamer1.0-plugins-base amd64 1.16.2-4 [619 kB] 2021-05-16T20:05:47.2712074Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 iio-sensor-proxy amd64 2.8-1ubuntu1 [35.8 kB] 2021-05-16T20:05:47.2717731Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libassimp5 amd64 5.0.1~ds0-1build1 [2775 kB] 2021-05-16T20:05:47.3305061Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libexiv2-27 amd64 0.27.2-8ubuntu2.2 [788 kB] 2021-05-16T20:05:47.3478036Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi0ldbl amd64 2.4.0-10build1 [155 kB] 2021-05-16T20:05:47.3536399Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi-bin amd64 2.4.0-10build1 [10.5 kB] 2021-05-16T20:05:47.3538264Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimagequant0 amd64 2.12.2-1.1 [31.4 kB] 2021-05-16T20:05:47.3544449Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] 2021-05-16T20:05:47.3601263Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-glib4 amd64 1.22.0-2 [101 kB] 2021-05-16T20:05:47.3613214Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-proxy amd64 1.22.0-2 [5908 B] 2021-05-16T20:05:47.3617252Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-genl-3-200 amd64 3.4.0-1 [11.1 kB] 2021-05-16T20:05:47.3619942Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-route-3-200 amd64 3.4.0-1 [149 kB] 2021-05-16T20:05:47.3662832Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnss-mdns amd64 0.14.1-1ubuntu1 [22.9 kB] 2021-05-16T20:05:47.3667245Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpam-gnome-keyring amd64 3.36.0-1ubuntu1 [23.3 kB] 2021-05-16T20:05:47.3668955Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpcsclite1 amd64 1.8.26-3 [22.0 kB] 2021-05-16T20:05:47.3695542Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-faux amd64 2.0.1+ds-1build3 [27.3 kB] 2021-05-16T20:05:47.3714041Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-icebridge amd64 2.0.1+ds-1build3 [42.8 kB] 2021-05-16T20:05:47.3718810Z Get:131 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-pgpointcloud amd64 2.0.1+ds-1build3 [75.3 kB] 2021-05-16T20:05:47.3751425Z Get:132 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-python amd64 2.0.1+ds-1build3 [136 kB] 2021-05-16T20:05:47.3844148Z Get:133 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsqlite3-mod-spatialite amd64 4.3.0a-6build1 [1265 kB] 2021-05-16T20:05:47.3941790Z Get:134 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-sqlite amd64 2.0.1+ds-1build3 [89.5 kB] 2021-05-16T20:05:47.3952700Z Get:135 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugins amd64 2.0.1+ds-1build3 [12.9 kB] 2021-05-16T20:05:47.3954974Z Get:136 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dcore5 amd64 5.12.8+dfsg-0ubuntu1 [137 kB] 2021-05-16T20:05:47.3999994Z Get:137 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53drender5 amd64 5.12.8+dfsg-0ubuntu1 [689 kB] 2021-05-16T20:05:47.4203413Z Get:138 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53danimation5 amd64 5.12.8+dfsg-0ubuntu1 [159 kB] 2021-05-16T20:05:47.4246283Z Get:139 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dinput5 amd64 5.12.8+dfsg-0ubuntu1 [125 kB] 2021-05-16T20:05:47.4282208Z Get:140 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dlogic5 amd64 5.12.8+dfsg-0ubuntu1 [25.9 kB] 2021-05-16T20:05:47.4288151Z Get:141 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dextras5 amd64 5.12.8+dfsg-0ubuntu1 [157 kB] 2021-05-16T20:05:47.4333633Z Get:142 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-assimpsceneimport-plugin amd64 5.12.8+dfsg-0ubuntu1 [45.2 kB] 2021-05-16T20:05:47.4346990Z Get:143 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-defaultgeometryloader-plugin amd64 5.12.8+dfsg-0ubuntu1 [33.3 kB] 2021-05-16T20:05:47.4354566Z Get:144 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-gltfsceneio-plugin amd64 5.12.8+dfsg-0ubuntu1 [110 kB] 2021-05-16T20:05:47.4395957Z Get:145 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dquickscene2d5 amd64 5.12.8+dfsg-0ubuntu1 [38.4 kB] 2021-05-16T20:05:47.4413959Z Get:146 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-scene2d-plugin amd64 5.12.8+dfsg-0ubuntu1 [17.1 kB] 2021-05-16T20:05:47.4419960Z Get:147 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-3d3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [224 kB] 2021-05-16T20:05:47.4475978Z Get:148 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-analysis3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [927 kB] 2021-05-16T20:05:47.4707243Z Get:149 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-app3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3060 kB] 2021-05-16T20:05:47.5566074Z Get:150 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtchooser amd64 66-2build1 [24.7 kB] 2021-05-16T20:05:47.5571282Z Get:151 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qdoc-qt5 amd64 5.12.8-0ubuntu1 [507 kB] 2021-05-16T20:05:47.5632220Z Get:152 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5help5 amd64 5.12.8-0ubuntu1 [134 kB] 2021-05-16T20:05:47.5645312Z Get:153 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qhelpgenerator-qt5 amd64 5.12.8-0ubuntu1 [64.3 kB] 2021-05-16T20:05:47.5654276Z Get:154 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-assistant amd64 5.12.8-0ubuntu1 [369 kB] 2021-05-16T20:05:47.5706192Z Get:155 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtattributionsscanner-qt5 amd64 5.12.8-0ubuntu1 [26.0 kB] 2021-05-16T20:05:47.5714071Z Get:156 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designer5 amd64 5.12.8-0ubuntu1 [2778 kB] 2021-05-16T20:05:47.6108663Z Get:157 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designercomponents5 amd64 5.12.8-0ubuntu1 [718 kB] 2021-05-16T20:05:47.6170717Z Get:158 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttools5-dev-tools amd64 5.12.8-0ubuntu1 [1031 kB] 2021-05-16T20:05:47.6256390Z Get:159 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-customwidgets amd64 3.10.4+dfsg-1ubuntu2 [3397 kB] 2021-05-16T20:05:47.7014362Z Get:160 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-server3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [311 kB] 2021-05-16T20:05:47.7151141Z Get:161 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgisgrass7-3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [228 kB] 2021-05-16T20:05:47.7191789Z Get:162 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgispython3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [43.1 kB] 2021-05-16T20:05:47.7210044Z Get:163 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-glib5 amd64 1.24.8-1 [529 kB] 2021-05-16T20:05:47.7251683Z Get:164 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-proxy amd64 1.24.8-1 [5856 B] 2021-05-16T20:05:47.7257715Z Get:165 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5test5 amd64 5.12.8+dfsg-0ubuntu1 [131 kB] 2021-05-16T20:05:47.7268903Z Get:166 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-bin amd64 1.3-2ubuntu3 [5484 B] 2021-05-16T20:05:47.7273910Z Get:167 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 modemmanager amd64 1.12.8-1 [755 kB] 2021-05-16T20:05:47.7414403Z Get:168 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 ttf-bitstream-vera all 1.10-8 [352 kB] 2021-05-16T20:05:47.7524439Z Get:169 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python-matplotlib-data all 3.1.2-1ubuntu4 [3788 kB] 2021-05-16T20:05:47.8289287Z Get:170 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-soupsieve all 1.9.5+dfsg-1 [29.1 kB] 2021-05-16T20:05:47.8300349Z Get:171 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-bs4 all 4.8.2-1 [83.0 kB] 2021-05-16T20:05:47.8313708Z Get:172 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-cycler all 0.10.0-3 [8132 B] 2021-05-16T20:05:47.8321974Z Get:173 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-dateutil all 2.7.3-3ubuntu1 [63.3 kB] 2021-05-16T20:05:47.8332014Z Get:174 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-decorator all 4.4.2-0ubuntu1 [10.3 kB] 2021-05-16T20:05:47.8339091Z Get:175 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-future all 0.18.2-2 [336 kB] 2021-05-16T20:05:47.8382043Z Get:176 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-webencodings all 0.5.1-1ubuntu1 [11.0 kB] 2021-05-16T20:05:47.8389611Z Get:177 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-html5lib all 1.0.1-2 [84.3 kB] 2021-05-16T20:05:47.8402036Z Get:178 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-ipython-genutils all 0.2.0-1ubuntu1 [21.1 kB] 2021-05-16T20:05:47.8411226Z Get:179 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-traitlets all 4.3.3-3 [59.9 kB] 2021-05-16T20:05:47.8421252Z Get:180 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-jupyter-core all 4.6.3-3 [41.2 kB] 2021-05-16T20:05:47.8431687Z Get:181 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-kiwisolver amd64 1.0.1-3build1 [61.3 kB] 2021-05-16T20:05:47.8444058Z Get:182 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-lxml amd64 4.5.0-1ubuntu0.3 [1382 kB] 2021-05-16T20:05:47.8596408Z Get:183 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-pyparsing all 2.4.6-1 [61.3 kB] 2021-05-16T20:05:47.8607172Z Get:184 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-matplotlib amd64 3.1.2-1ubuntu4 [4459 kB] 2021-05-16T20:05:47.9381408Z Get:185 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-nbformat all 5.0.4-1 [29.8 kB] 2021-05-16T20:05:47.9392656Z Get:186 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-olefile all 0.46-2 [33.7 kB] 2021-05-16T20:05:47.9399340Z Get:187 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyproj amd64 2.5.0+ds-1 [297 kB] 2021-05-16T20:05:47.9479217Z Get:188 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-tz all 2019.3-1 [24.4 kB] 2021-05-16T20:05:47.9486691Z Get:189 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-owslib all 0.19.1-1 [115 kB] 2021-05-16T20:05:47.9503778Z Get:190 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-pil amd64 7.0.0-4ubuntu0.3 [363 kB] 2021-05-16T20:05:47.9543212Z Get:191 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-retrying all 1.3.3-4 [8160 B] 2021-05-16T20:05:47.9546778Z Get:192 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-plotly all 4.4.1+dfsg-1 [1960 kB] 2021-05-16T20:05:48.0099145Z Get:193 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-psycopg2 amd64 2.8.4-2 [112 kB] 2021-05-16T20:05:48.0125018Z Get:194 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-sip amd64 4.19.21+dfsg-1build1 [87.9 kB] 2021-05-16T20:05:48.0136192Z Get:195 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5 amd64 5.14.1+dfsg-3build1 [2318 kB] 2021-05-16T20:05:48.0312792Z Get:196 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qsci amd64 2.11.2+dfsg-6 [230 kB] 2021-05-16T20:05:48.0332068Z Get:197 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsql amd64 5.14.1+dfsg-3build1 [87.5 kB] 2021-05-16T20:05:48.0344905Z Get:198 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsvg amd64 5.14.1+dfsg-3build1 [26.9 kB] 2021-05-16T20:05:48.0351423Z Get:199 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtwebkit amd64 5.14.1+dfsg-3build1 [103 kB] 2021-05-16T20:05:48.0384855Z Get:200 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis-common all 3.10.4+dfsg-1ubuntu2 [2390 kB] 2021-05-16T20:05:48.1076020Z Get:201 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis amd64 3.10.4+dfsg-1ubuntu2 [7772 kB] 2021-05-16T20:05:48.3246823Z Get:202 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-tk amd64 3.8.5-1~20.04.1 [103 kB] 2021-05-16T20:05:48.3296347Z Get:203 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-leaflet all 1.6.0~dfsg-1 [313 kB] 2021-05-16T20:05:48.3365693Z Get:204 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-common all 3.10.4+dfsg-1ubuntu2 [16.7 MB] 2021-05-16T20:05:48.6474658Z Get:205 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis amd64 3.10.4+dfsg-1ubuntu2 [4788 kB] 2021-05-16T20:05:48.7233745Z Get:206 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass-common all 3.10.4+dfsg-1ubuntu2 [463 kB] 2021-05-16T20:05:48.7334891Z Get:207 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-provider-grass amd64 3.10.4+dfsg-1ubuntu2 [92.3 kB] 2021-05-16T20:05:48.7354070Z Get:208 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass amd64 3.10.4+dfsg-1ubuntu2 [601 kB] 2021-05-16T20:05:48.7436505Z Get:209 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-gtk-platformtheme amd64 5.12.8+dfsg-0ubuntu1 [124 kB] 2021-05-16T20:05:48.7450201Z Get:210 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttranslations5-l10n all 5.12.8-0ubuntu1 [1486 kB] 2021-05-16T20:05:48.7675176Z Get:211 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 wpasupplicant amd64 2:2.9-1ubuntu4.3 [1183 kB] 2021-05-16T20:05:48.7848104Z Get:212 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-bin amd64 6.3.1-1 [88.8 kB] 2021-05-16T20:05:48.7857135Z Get:213 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch-data all 20191128-3 [32.3 kB] 2021-05-16T20:05:48.7862159Z Get:214 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch amd64 2.5.2+repack0-2ubuntu3 [53.1 kB] 2021-05-16T20:05:49.8007389Z Fetched 183 MB in 6s (31.2 MB/s) 2021-05-16T20:05:49.8326623Z Selecting previously unselected package libdouble-conversion3:amd64. 2021-05-16T20:05:49.8406882Z (Reading database ... 2021-05-16T20:05:49.8407397Z (Reading database ... 5% 2021-05-16T20:05:49.8409283Z (Reading database ... 10% 2021-05-16T20:05:49.8410245Z (Reading database ... 15% 2021-05-16T20:05:49.8411233Z (Reading database ... 20% 2021-05-16T20:05:49.8413164Z (Reading database ... 25% 2021-05-16T20:05:49.8413617Z (Reading database ... 30% 2021-05-16T20:05:49.8414078Z (Reading database ... 35% 2021-05-16T20:05:49.8414521Z (Reading database ... 40% 2021-05-16T20:05:49.8414973Z (Reading database ... 45% 2021-05-16T20:05:49.8415412Z (Reading database ... 50% 2021-05-16T20:05:49.8453144Z (Reading database ... 55% 2021-05-16T20:05:49.8492911Z (Reading database ... 60% 2021-05-16T20:05:49.8520355Z (Reading database ... 65% 2021-05-16T20:05:49.8634752Z (Reading database ... 70% 2021-05-16T20:05:49.8741895Z (Reading database ... 75% 2021-05-16T20:05:49.8765989Z (Reading database ... 80% 2021-05-16T20:05:49.9101976Z (Reading database ... 85% 2021-05-16T20:05:49.9377967Z (Reading database ... 90% 2021-05-16T20:05:49.9449293Z (Reading database ... 95% 2021-05-16T20:05:49.9450377Z (Reading database ... 100% 2021-05-16T20:05:49.9451349Z (Reading database ... 269928 files and directories currently installed.) 2021-05-16T20:05:49.9560192Z Preparing to unpack .../000-libdouble-conversion3_3.1.5-4ubuntu1_amd64.deb ... 2021-05-16T20:05:49.9576725Z Unpacking libdouble-conversion3:amd64 (3.1.5-4ubuntu1) ... 2021-05-16T20:05:49.9933236Z Selecting previously unselected package libqt5core5a:amd64. 2021-05-16T20:05:50.0138904Z Preparing to unpack .../001-libqt5core5a_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-05-16T20:05:50.0213771Z Unpacking libqt5core5a:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:05:50.1974083Z Selecting previously unselected package libegl-mesa0:amd64. 2021-05-16T20:05:50.2189363Z Preparing to unpack .../002-libegl-mesa0_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-16T20:05:50.2200307Z Unpacking libegl-mesa0:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T20:05:50.2533531Z Selecting previously unselected package libegl1:amd64. 2021-05-16T20:05:50.2767688Z Preparing to unpack .../003-libegl1_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T20:05:50.2773478Z Unpacking libegl1:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:05:50.3053984Z Selecting previously unselected package libevdev2:amd64. 2021-05-16T20:05:50.3277296Z Preparing to unpack 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2021-05-16T20:06:21.5703238Z Setting up libkmldom1:amd64 (1.3.0-8build1) ... 2021-05-16T20:06:21.5723314Z Setting up libspatialite7:amd64 (4.3.0a-6build1) ... 2021-05-16T20:06:21.5768746Z Setting up libgcr-ui-3-1:amd64 (3.36.0-2build1) ... 2021-05-16T20:06:21.5786451Z Setting up python3-matplotlib (3.1.2-1ubuntu4) ... 2021-05-16T20:06:22.4886936Z Setting up libkmlengine1:amd64 (1.3.0-8build1) ... 2021-05-16T20:06:22.4904873Z Setting up libqt5keychain1:amd64 (0.10.0-1build1) ... 2021-05-16T20:06:22.4923597Z Setting up libsqlite3-mod-spatialite:amd64 (4.3.0a-6build1) ... 2021-05-16T20:06:22.4941549Z Setting up qdoc-qt5 (5.12.8-0ubuntu1) ... 2021-05-16T20:06:22.4961075Z Setting up libqt5positioning5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:22.4978698Z Setting up proj-bin (6.3.1-1) ... 2021-05-16T20:06:22.4994900Z Setting up libqca-qt5-2-plugins:amd64 (2.2.1-2build1) ... 2021-05-16T20:06:22.5011187Z Setting up libgstreamer-plugins-base1.0-0:amd64 (1.16.2-4) ... 2021-05-16T20:06:22.5038324Z Setting up geoclue-2.0 (2.5.6-0ubuntu1) ... 2021-05-16T20:06:22.8696752Z geoclue.service is a disabled or a static unit, not starting it. 2021-05-16T20:06:22.8716626Z Setting up libqt5serialport5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T20:06:22.8734260Z Setting up python3-nbformat (5.0.4-1) ... 2021-05-16T20:06:23.0238793Z Setting up libmbim-proxy (1.22.0-2) ... 2021-05-16T20:06:23.0258534Z Setting up python3-pyproj (2.5.0+ds-1) ... 2021-05-16T20:06:23.1799588Z Setting up libqt5network5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:23.1819608Z Setting up python3-bs4 (4.8.2-1) ... 2021-05-16T20:06:23.3639649Z Setting up libgeotiff5:amd64 (1.5.1-2) ... 2021-05-16T20:06:23.3657890Z Setting up gcr (3.36.0-2build1) ... 2021-05-16T20:06:23.3676177Z Setting up libqt5sql5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:23.3695332Z Setting up wpasupplicant (2:2.9-1ubuntu4.3) ... 2021-05-16T20:06:23.5175744Z Created symlink /etc/systemd/system/dbus-fi.w1.wpa_supplicant1.service → /lib/systemd/system/wpa_supplicant.service. 2021-05-16T20:06:23.5178560Z Created symlink /etc/systemd/system/multi-user.target.wants/wpa_supplicant.service → /lib/systemd/system/wpa_supplicant.service. 2021-05-16T20:06:24.0094459Z Setting up python3-pil:amd64 (7.0.0-4ubuntu0.3) ... 2021-05-16T20:06:24.2676413Z Setting up libqt5xml5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:24.2697232Z Setting up gstreamer1.0-plugins-base:amd64 (1.16.2-4) ... 2021-05-16T20:06:24.2716837Z Setting up libqt5qml5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T20:06:24.2739172Z Setting up qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:06:24.2761391Z Setting up qtattributionsscanner-qt5 (5.12.8-0ubuntu1) ... 2021-05-16T20:06:24.2780197Z Setting up libqt5webchannel5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T20:06:24.2802884Z Setting up python3-plotly (4.4.1+dfsg-1) ... 2021-05-16T20:06:24.4240377Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T20:06:24.4241728Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-05-16T20:06:24.4243160Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T20:06:24.4244315Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-05-16T20:06:24.4677641Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:194: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T20:06:24.4678758Z if direction is "increasing": 2021-05-16T20:06:24.4680132Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:199: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T20:06:24.4681100Z elif direction is "decreasing": 2021-05-16T20:06:24.4845959Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:176: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T20:06:24.4847034Z if direction is "increasing": 2021-05-16T20:06:24.4848346Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:179: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T20:06:24.4849289Z elif direction is "decreasing": 2021-05-16T20:06:25.3469404Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:460: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T20:06:25.3471081Z if props["offset_coordinates"] is "data": 2021-05-16T20:06:25.3472899Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:572: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-05-16T20:06:25.3474170Z if props["coordinates"] is not "data": 2021-05-16T20:06:26.0632840Z Setting up avahi-daemon (0.7-4ubuntu7) ... 2021-05-16T20:06:26.6055459Z Created symlink /etc/systemd/system/dbus-org.freedesktop.Avahi.service → /lib/systemd/system/avahi-daemon.service. 2021-05-16T20:06:26.6057835Z Created symlink /etc/systemd/system/multi-user.target.wants/avahi-daemon.service → /lib/systemd/system/avahi-daemon.service. 2021-05-16T20:06:26.6059863Z Created symlink /etc/systemd/system/sockets.target.wants/avahi-daemon.socket → /lib/systemd/system/avahi-daemon.socket. 2021-05-16T20:06:27.7042038Z Setting up libnss-mdns:amd64 (0.14.1-1ubuntu1) ... 2021-05-16T20:06:27.7069742Z First installation detected... 2021-05-16T20:06:27.7071769Z Checking NSS setup... 2021-05-16T20:06:27.7106014Z Setting up libwacom2:amd64 (1.3-2ubuntu3) ... 2021-05-16T20:06:27.7125486Z Setting up libqt5sql5-sqlite:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:27.7149057Z Setting up python3-owslib (0.19.1-1) ... 2021-05-16T20:06:27.9766184Z Setting up libgdal26 (3.0.4+dfsg-1build3) ... 2021-05-16T20:06:27.9794235Z Setting up libqmi-glib5:amd64 (1.24.8-1) ... 2021-05-16T20:06:27.9812064Z Setting up libpdal-base9 (2.0.1+ds-1build3) ... 2021-05-16T20:06:27.9832233Z Setting up libinput-bin (1.15.5-1ubuntu0.2) ... 2021-05-16T20:06:27.9849997Z Setting up libwacom-bin (1.3-2ubuntu3) ... 2021-05-16T20:06:27.9871249Z Setting up libpdal-plugin-pgpointcloud (2.0.1+ds-1build3) ... 2021-05-16T20:06:27.9894209Z Setting up libpdal-plugin-icebridge (2.0.1+ds-1build3) ... 2021-05-16T20:06:27.9912920Z Setting up libpdal-plugin-python (2.0.1+ds-1build3) ... 2021-05-16T20:06:27.9930819Z Setting up python3-gdal (3.0.4+dfsg-1build3) ... 2021-05-16T20:06:28.1663767Z Setting up libinput10:amd64 (1.15.5-1ubuntu0.2) ... 2021-05-16T20:06:28.1681490Z Setting up libpdal-plugin-faux (2.0.1+ds-1build3) ... 2021-05-16T20:06:28.1700385Z Setting up grass-core (7.8.2-1build3) ... 2021-05-16T20:06:28.4928778Z /usr/lib/grass78/etc/python/grass/pygrass/gis/__init__.py:75: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T20:06:28.4930851Z if value is '': 2021-05-16T20:06:28.5864079Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T20:06:28.5865150Z if do_profiling is "True" or do_profiling is "1": 2021-05-16T20:06:28.5866230Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T20:06:28.5867205Z if do_profiling is "True" or do_profiling is "1": 2021-05-16T20:06:28.5868449Z /usr/lib/grass78/etc/python/grass/temporal/core.py:582: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-05-16T20:06:28.5869440Z if driver_string is not None and driver_string is not "": 2021-05-16T20:06:28.6278765Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T20:06:28.6280185Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-05-16T20:06:28.6281554Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T20:06:28.6282788Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-05-16T20:06:28.6879930Z Setting up libpdal-plugin-sqlite (2.0.1+ds-1build3) ... 2021-05-16T20:06:28.6897430Z Setting up libqt5gui5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:28.6968256Z Setting up libqmi-proxy (1.24.8-1) ... 2021-05-16T20:06:28.6984102Z Setting up libqt5widgets5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:28.7005978Z Setting up libqt53dcore5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:28.7154265Z Setting up libqt5help5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T20:06:28.7171402Z Setting up libqt53dlogic5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:28.7189182Z Setting up qt5-gtk-platformtheme:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:28.7209834Z Setting up libqgis-native3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:06:28.7228825Z Setting up libqt5printsupport5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:28.7246568Z Setting up gdal-bin (3.0.4+dfsg-1build3) ... 2021-05-16T20:06:28.8051742Z Setting up qt5-image-formats-plugins:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T20:06:28.8069663Z Setting up libqt53dinput5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:28.8088105Z Setting up libqt5opengl5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:28.8107263Z Setting up modemmanager (1.12.8-1) ... 2021-05-16T20:06:28.9335999Z Created symlink /etc/systemd/system/dbus-org.freedesktop.ModemManager1.service → /lib/systemd/system/ModemManager.service. 2021-05-16T20:06:28.9339029Z Created symlink /etc/systemd/system/multi-user.target.wants/ModemManager.service → /lib/systemd/system/ModemManager.service. 2021-05-16T20:06:29.4627721Z Setting up libqt5quick5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T20:06:29.4648290Z Setting up libqt5designer5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T20:06:29.4666007Z Setting up libpdal-plugins (2.0.1+ds-1build3) ... 2021-05-16T20:06:29.4682788Z Setting up libqt5svg5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T20:06:29.4702081Z Setting up libqt53drender5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:29.4722630Z Setting up qhelpgenerator-qt5 (5.12.8-0ubuntu1) ... 2021-05-16T20:06:29.4740556Z Setting up libqwt-qt5-6 (6.1.4-1.1build1) ... 2021-05-16T20:06:29.4760976Z Setting up libqscintilla2-qt5-15 (2.11.2+dfsg-6) ... 2021-05-16T20:06:29.4779481Z Setting up libqt5webkit5:amd64 (5.212.0~alpha4-1ubuntu2) ... 2021-05-16T20:06:29.4797844Z Setting up libqt5designercomponents5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T20:06:29.4816889Z Setting up libqt5quickwidgets5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T20:06:29.4834828Z Setting up libqgis-core3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:06:29.4856808Z Setting up libqt53dquickscene2d5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:29.4875213Z Setting up libqgis-gui3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:06:29.4897260Z Setting up libqgis-analysis3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:06:29.4919025Z Setting up qt5-assistant (5.12.8-0ubuntu1) ... 2021-05-16T20:06:29.4943298Z Setting up qttools5-dev-tools (5.12.8-0ubuntu1) ... 2021-05-16T20:06:29.4958784Z Setting up libqgispython3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:06:29.4979287Z Setting up qt3d-scene2d-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:29.4996115Z Setting up python3-pyqt5 (5.14.1+dfsg-3build1) ... 2021-05-16T20:06:29.6518725Z Setting up python3-pyqt5.qtsvg (5.14.1+dfsg-3build1) ... 2021-05-16T20:06:29.6540625Z Setting up libqt53danimation5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:29.6557358Z Setting up qt3d-defaultgeometryloader-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:29.6573426Z Setting up qgis-providers (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:06:59.9625188Z Setting up libqt53dextras5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:59.9644340Z Setting up python3-pyqt5.qtsql (5.14.1+dfsg-3build1) ... 2021-05-16T20:06:59.9669370Z Setting up libqgis-customwidgets (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:06:59.9687547Z Setting up qt3d-gltfsceneio-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:59.9705906Z Setting up libqgis-server3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:06:59.9722223Z Setting up libqgisgrass7-3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:06:59.9737674Z Setting up qt3d-assimpsceneimport-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T20:06:59.9755767Z Setting up python3-qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:07:00.1133385Z Setting up libqgis-3d3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:07:00.1150932Z Setting up python3-pyqt5.qtwebkit (5.14.1+dfsg-3build1) ... 2021-05-16T20:07:00.1170967Z Setting up qgis-provider-grass (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:07:00.1187842Z Setting up python3-pyqt5.qsci (2.11.2+dfsg-6) ... 2021-05-16T20:07:00.1207605Z Setting up python3-qgis (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:07:00.2751699Z Setting up libqgis-app3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:07:00.2771491Z Setting up qgis (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:07:00.2797978Z Setting up qgis-plugin-grass (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T20:07:00.2905515Z Processing triggers for dbus (1.12.16-2ubuntu2.1) ... 2021-05-16T20:07:00.3240616Z Processing triggers for shared-mime-info (1.15-1) ... 2021-05-16T20:07:01.1438889Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-16T20:07:01.1603555Z Processing triggers for mime-support (3.64ubuntu1) ... 2021-05-16T20:07:01.1827154Z Processing triggers for hicolor-icon-theme (0.17-2) ... 2021-05-16T20:07:01.1964886Z Processing triggers for libglib2.0-0:amd64 (2.64.6-1~ubuntu20.04.3) ... 2021-05-16T20:07:01.2789441Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:07:01.3054073Z Processing triggers for systemd (245.4-4ubuntu3.6) ... 2021-05-16T20:07:01.5709641Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T20:07:11.9024158Z Setting up pinentry-gnome3 (1.1.0-3build1) ... 2021-05-16T20:07:11.9191208Z Setting up gnome-keyring (3.36.0-1ubuntu1) ... 2021-05-16T20:07:13.7711041Z ##[group]Run adigherman/actions/get-repo-name@master 2021-05-16T20:07:13.7711544Z with: 2021-05-16T20:07:13.7712013Z github_slug: neuroconductor/neurobase 2021-05-16T20:07:13.7712434Z env: 2021-05-16T20:07:13.7712844Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:07:13.7713270Z TIC_DEPLOY_KEY: 2021-05-16T20:07:13.7714024Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:07:13.7715688Z GITHUB_PAT: *** 2021-05-16T20:07:13.7716064Z COVERALLS_TOKEN: 2021-05-16T20:07:13.7716524Z continue-on-error: true 2021-05-16T20:07:13.7716953Z VDIFFR_RUN_TESTS: 2021-05-16T20:07:13.7717408Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:07:13.7717809Z TZ: UTC 2021-05-16T20:07:13.7718227Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:07:13.7718600Z NOT_CRAN: true 2021-05-16T20:07:13.7718953Z ##[endgroup] 2021-05-16T20:07:13.8028680Z repo slug is: neuroconductor/neurobase 2021-05-16T20:07:13.8141066Z ##[group]Run adigherman/actions/get-repo-version@master 2021-05-16T20:07:13.8141583Z env: 2021-05-16T20:07:13.8142001Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:07:13.8142429Z TIC_DEPLOY_KEY: 2021-05-16T20:07:13.8143192Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:07:13.8144440Z GITHUB_PAT: *** 2021-05-16T20:07:13.8144800Z COVERALLS_TOKEN: 2021-05-16T20:07:13.8145260Z continue-on-error: true 2021-05-16T20:07:13.8145690Z VDIFFR_RUN_TESTS: 2021-05-16T20:07:13.8146258Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:07:13.8146662Z TZ: UTC 2021-05-16T20:07:13.8147025Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:07:13.8147401Z NOT_CRAN: true 2021-05-16T20:07:13.8147756Z ##[endgroup] 2021-05-16T20:07:14.0031200Z ##[group]Run adigherman/actions/get-release-asset@master 2021-05-16T20:07:14.0031751Z with: 2021-05-16T20:07:14.0032128Z repo_name: neurobase 2021-05-16T20:07:14.0032517Z repo_version: 1.30.1 2021-05-16T20:07:14.0032896Z runner_os: Linux 2021-05-16T20:07:14.0033246Z R_version: 4.1 2021-05-16T20:07:14.0033587Z env: 2021-05-16T20:07:14.0034034Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:07:14.0034478Z TIC_DEPLOY_KEY: 2021-05-16T20:07:14.0035231Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:07:14.0036901Z GITHUB_PAT: *** 2021-05-16T20:07:14.0037290Z COVERALLS_TOKEN: 2021-05-16T20:07:14.0037739Z continue-on-error: true 2021-05-16T20:07:14.0038192Z VDIFFR_RUN_TESTS: 2021-05-16T20:07:14.0038653Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:07:14.0039079Z TZ: UTC 2021-05-16T20:07:14.0039439Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:07:14.0039834Z NOT_CRAN: true 2021-05-16T20:07:14.0040208Z ##[endgroup] 2021-05-16T20:07:14.0366269Z Package: neurobase 2021-05-16T20:07:14.0369433Z Version: 1.30.1 2021-05-16T20:07:14.0370111Z OS: Linux 2021-05-16T20:07:14.0448285Z ##[group]Run install.packages('remotes') 2021-05-16T20:07:14.0448929Z install.packages('remotes') 2021-05-16T20:07:14.0449670Z saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) 2021-05-16T20:07:14.0450603Z writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") 2021-05-16T20:07:14.0457605Z shell: /usr/local/bin/Rscript {0} 2021-05-16T20:07:14.0457985Z env: 2021-05-16T20:07:14.0458403Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:07:14.0458831Z TIC_DEPLOY_KEY: 2021-05-16T20:07:14.0459617Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:07:14.0460872Z GITHUB_PAT: *** 2021-05-16T20:07:14.0461237Z COVERALLS_TOKEN: 2021-05-16T20:07:14.0461693Z continue-on-error: true 2021-05-16T20:07:14.0462122Z VDIFFR_RUN_TESTS: 2021-05-16T20:07:14.0462585Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:07:14.0463017Z TZ: UTC 2021-05-16T20:07:14.0463373Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:07:14.0463766Z NOT_CRAN: true 2021-05-16T20:07:14.0464123Z ##[endgroup] 2021-05-16T20:07:14.2032542Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:07:14.2034011Z (as ‘lib’ is unspecified) 2021-05-16T20:07:28.2080144Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/remotes_2.3.0.tar.gz' 2021-05-16T20:07:28.4924526Z Content type 'binary/octet-stream' length 148709 bytes (145 KB) 2021-05-16T20:07:28.5055072Z ================================================== 2021-05-16T20:07:28.5056081Z downloaded 145 KB 2021-05-16T20:07:28.5056608Z 2021-05-16T20:07:28.7783033Z * installing *source* package ‘remotes’ ... 2021-05-16T20:07:28.7822417Z ** package ‘remotes’ successfully unpacked and MD5 sums checked 2021-05-16T20:07:28.7823727Z ** using staged installation 2021-05-16T20:07:28.7981832Z ** R 2021-05-16T20:07:28.8163415Z ** inst 2021-05-16T20:07:28.8175068Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:07:30.4751534Z ** help 2021-05-16T20:07:30.5603775Z *** installing help indices 2021-05-16T20:07:30.6153984Z ** building package indices 2021-05-16T20:07:30.8373259Z ** installing vignettes 2021-05-16T20:07:30.8423432Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:07:31.0088992Z ** testing if installed package can be loaded from final location 2021-05-16T20:07:31.2092622Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:07:31.2115631Z * DONE (remotes) 2021-05-16T20:07:31.2213545Z 2021-05-16T20:07:31.2214674Z The downloaded source packages are in 2021-05-16T20:07:31.2216322Z ‘/tmp/Rtmp8EseCM/downloaded_packages’ 2021-05-16T20:07:49.3112852Z ##[group]Run actions/cache@v1 2021-05-16T20:07:49.3113251Z with: 2021-05-16T20:07:49.3113645Z path: /home/runner/work/_temp/Library 2021-05-16T20:07:49.3116522Z key: Linux-e3adb7ee20b68d8bd651f6f30d4cc1690a70853cf8f0c4dcbc5c14b00f693a6a-1-5e9764a4d033e94c9d91fec68299c7a89b4c962bc3b63e4cfaa220bba50d9bb7 2021-05-16T20:07:49.3120156Z restore-keys: Linux-e3adb7ee20b68d8bd651f6f30d4cc1690a70853cf8f0c4dcbc5c14b00f693a6a-1- 2021-05-16T20:07:49.3121353Z env: 2021-05-16T20:07:49.3121750Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:07:49.3122185Z TIC_DEPLOY_KEY: 2021-05-16T20:07:49.3122931Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:07:49.3124638Z GITHUB_PAT: *** 2021-05-16T20:07:49.3125013Z COVERALLS_TOKEN: 2021-05-16T20:07:49.3125453Z continue-on-error: true 2021-05-16T20:07:49.3125911Z VDIFFR_RUN_TESTS: 2021-05-16T20:07:49.3126350Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:07:49.3126821Z TZ: UTC 2021-05-16T20:07:49.3127188Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:07:49.3127561Z NOT_CRAN: true 2021-05-16T20:07:49.3127916Z ##[endgroup] 2021-05-16T20:07:49.3529361Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-05-16T20:07:49.3602932Z ##[group]Run Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-05-16T20:07:49.3603684Z Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-05-16T20:07:49.3604389Z sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") 2021-05-16T20:07:49.3604980Z sudo -s eval "$sysreqs" 2021-05-16T20:07:49.3647157Z shell: /usr/bin/bash -e {0} 2021-05-16T20:07:49.3647524Z env: 2021-05-16T20:07:49.3647955Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:07:49.3648423Z TIC_DEPLOY_KEY: 2021-05-16T20:07:49.3649199Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:07:49.3650471Z GITHUB_PAT: *** 2021-05-16T20:07:49.3650859Z COVERALLS_TOKEN: 2021-05-16T20:07:49.3651327Z continue-on-error: true 2021-05-16T20:07:49.3651765Z VDIFFR_RUN_TESTS: 2021-05-16T20:07:49.3652414Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:07:49.3652837Z TZ: UTC 2021-05-16T20:07:49.3653233Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:07:49.3653631Z NOT_CRAN: true 2021-05-16T20:07:49.3654079Z RHUB_PLATFORM: linux-x86_64-ubuntu-gcc 2021-05-16T20:07:49.3654542Z ##[endgroup] 2021-05-16T20:07:49.5441234Z Using github PAT from envvar GITHUB_PAT 2021-05-16T20:07:50.0297568Z Downloading GitHub repo r-hub/sysreqs@HEAD 2021-05-16T20:08:04.7989546Z rprojroot (NA -> 2.0.2) [CRAN] 2021-05-16T20:08:04.7991042Z crayon (NA -> 1.4.1) [CRAN] 2021-05-16T20:08:04.7992001Z R6 (NA -> 2.5.0) [CRAN] 2021-05-16T20:08:04.7992907Z desc (NA -> 1.3.0) [CRAN] 2021-05-16T20:08:04.7993857Z debugme (NA -> 1.1.0) [CRAN] 2021-05-16T20:08:04.8013019Z Installing 5 packages: rprojroot, crayon, R6, desc, debugme 2021-05-16T20:08:04.8022842Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:08:04.8024100Z (as ‘lib’ is unspecified) 2021-05-16T20:08:18.6415381Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rprojroot_2.0.2.tar.gz' 2021-05-16T20:08:18.9185330Z Content type 'binary/octet-stream' length 61445 bytes (60 KB) 2021-05-16T20:08:18.9239300Z ================================================== 2021-05-16T20:08:18.9240053Z downloaded 60 KB 2021-05-16T20:08:18.9240518Z 2021-05-16T20:08:18.9278081Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/crayon_1.4.1.tar.gz' 2021-05-16T20:08:19.1994017Z Content type 'binary/octet-stream' length 35834 bytes (34 KB) 2021-05-16T20:08:19.2005534Z ================================================== 2021-05-16T20:08:19.2006460Z downloaded 34 KB 2021-05-16T20:08:19.2006935Z 2021-05-16T20:08:19.2043693Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R6_2.5.0.tar.gz' 2021-05-16T20:08:19.4742738Z Content type 'binary/octet-stream' length 64110 bytes (62 KB) 2021-05-16T20:08:19.4801432Z ================================================== 2021-05-16T20:08:19.4802349Z downloaded 62 KB 2021-05-16T20:08:19.4802696Z 2021-05-16T20:08:19.4844773Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/desc_1.3.0.tar.gz' 2021-05-16T20:08:19.7591799Z Content type 'binary/octet-stream' length 292756 bytes (285 KB) 2021-05-16T20:08:19.7760359Z ================================================== 2021-05-16T20:08:19.7760858Z downloaded 285 KB 2021-05-16T20:08:19.7761136Z 2021-05-16T20:08:19.7796036Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/debugme_1.1.0.tar.gz' 2021-05-16T20:08:20.6245427Z Content type 'application/x-tar' length 997019 bytes (973 KB) 2021-05-16T20:08:20.6541585Z ================================================== 2021-05-16T20:08:20.6542087Z downloaded 973 KB 2021-05-16T20:08:20.6592990Z 2021-05-16T20:08:20.8901446Z * installing *source* package ‘rprojroot’ ... 2021-05-16T20:08:20.8923996Z ** package ‘rprojroot’ successfully unpacked and MD5 sums checked 2021-05-16T20:08:20.8925176Z ** using staged installation 2021-05-16T20:08:20.9051796Z ** R 2021-05-16T20:08:20.9093457Z ** inst 2021-05-16T20:08:20.9103367Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:08:21.3613210Z ** help 2021-05-16T20:08:21.3852853Z *** installing help indices 2021-05-16T20:08:21.4116918Z *** copying figures 2021-05-16T20:08:21.4121786Z ** building package indices 2021-05-16T20:08:21.5973321Z ** installing vignettes 2021-05-16T20:08:21.6024443Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:08:21.7683706Z ** testing if installed package can be loaded from final location 2021-05-16T20:08:21.9395350Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:08:21.9404343Z * DONE (rprojroot) 2021-05-16T20:08:22.1652890Z * installing *source* package ‘crayon’ ... 2021-05-16T20:08:22.1670067Z ** package ‘crayon’ successfully unpacked and MD5 sums checked 2021-05-16T20:08:22.1671246Z ** using staged installation 2021-05-16T20:08:22.1791423Z ** R 2021-05-16T20:08:22.1872876Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:08:22.9538070Z ** help 2021-05-16T20:08:23.0051549Z *** installing help indices 2021-05-16T20:08:23.0404302Z ** building package indices 2021-05-16T20:08:23.2581869Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:08:23.4311848Z ** testing if installed package can be loaded from final location 2021-05-16T20:08:23.6170460Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:08:23.6171202Z * DONE (crayon) 2021-05-16T20:08:23.8347316Z * installing *source* package ‘R6’ ... 2021-05-16T20:08:23.8361329Z ** package ‘R6’ successfully unpacked and MD5 sums checked 2021-05-16T20:08:23.8362341Z ** using staged installation 2021-05-16T20:08:23.8483151Z ** R 2021-05-16T20:08:23.8544931Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:08:24.3057020Z ** help 2021-05-16T20:08:24.3247575Z *** installing help indices 2021-05-16T20:08:24.3433264Z *** copying figures 2021-05-16T20:08:24.3436645Z ** building package indices 2021-05-16T20:08:24.5259206Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:08:24.6902593Z ** testing if installed package can be loaded from final location 2021-05-16T20:08:24.8584306Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:08:24.8592545Z * DONE (R6) 2021-05-16T20:08:25.1503467Z * installing *source* package ‘desc’ ... 2021-05-16T20:08:25.1551375Z ** package ‘desc’ successfully unpacked and MD5 sums checked 2021-05-16T20:08:25.1552574Z ** using staged installation 2021-05-16T20:08:25.1697874Z ** R 2021-05-16T20:08:25.1818132Z ** inst 2021-05-16T20:08:25.1833635Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:08:26.5994780Z ** help 2021-05-16T20:08:26.7206028Z *** installing help indices 2021-05-16T20:08:26.8015198Z ** building package indices 2021-05-16T20:08:27.0583652Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:08:27.2385538Z ** testing if installed package can be loaded from final location 2021-05-16T20:08:27.4433852Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:08:27.4450674Z * DONE (desc) 2021-05-16T20:08:27.6895906Z * installing *source* package ‘debugme’ ... 2021-05-16T20:08:27.6927372Z ** package ‘debugme’ successfully unpacked and MD5 sums checked 2021-05-16T20:08:27.6928579Z ** using staged installation 2021-05-16T20:08:27.7028766Z ** R 2021-05-16T20:08:27.7058609Z ** inst 2021-05-16T20:08:27.7077983Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:08:28.0053157Z ** help 2021-05-16T20:08:28.0181355Z *** installing help indices 2021-05-16T20:08:28.0388507Z ** building package indices 2021-05-16T20:08:28.2193445Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:08:28.3900893Z ** testing if installed package can be loaded from final location 2021-05-16T20:08:28.5619872Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:08:28.5626667Z * DONE (debugme) 2021-05-16T20:08:28.5698548Z 2021-05-16T20:08:28.5699377Z The downloaded source packages are in 2021-05-16T20:08:28.5700740Z ‘/tmp/RtmpwhjIMl/downloaded_packages’ 2021-05-16T20:08:28.5701379Z Running `R CMD build`... 2021-05-16T20:08:28.7939666Z * checking for file ‘/tmp/RtmpwhjIMl/remotes6923760f75f2/r-hub-sysreqs-f068afa/DESCRIPTION’ ... OK 2021-05-16T20:08:28.7941395Z * preparing ‘sysreqs’: 2021-05-16T20:08:28.7942538Z * checking DESCRIPTION meta-information ... OK 2021-05-16T20:08:28.7944026Z * checking for LF line-endings in source and make files and shell scripts 2021-05-16T20:08:28.7945146Z * checking for empty or unneeded directories 2021-05-16T20:08:28.7946246Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-16T20:08:28.7947298Z * building ‘sysreqs_1.0.0.9000.tar.gz’ 2021-05-16T20:08:28.7949425Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:08:28.7950529Z (as ‘lib’ is unspecified) 2021-05-16T20:08:28.9895128Z * installing *source* package ‘sysreqs’ ... 2021-05-16T20:08:28.9896902Z ** using staged installation 2021-05-16T20:08:29.0021160Z ** R 2021-05-16T20:08:29.0053637Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:08:29.3487406Z ** help 2021-05-16T20:08:29.3688588Z *** installing help indices 2021-05-16T20:08:29.3849844Z ** building package indices 2021-05-16T20:08:29.5670784Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:08:29.7502378Z ** testing if installed package can be loaded from final location 2021-05-16T20:08:29.9327428Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:08:29.9333931Z * DONE (sysreqs) 2021-05-16T20:08:46.6305997Z Hit:1 http://security.ubuntu.com/ubuntu focal-security InRelease 2021-05-16T20:08:46.6307966Z Hit:2 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-05-16T20:08:46.6309760Z Hit:3 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease 2021-05-16T20:08:46.6311624Z Hit:4 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease 2021-05-16T20:08:46.6671006Z Hit:5 https://download.mono-project.com/repo/ubuntu stable-focal InRelease 2021-05-16T20:08:46.7278633Z Hit:6 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease 2021-05-16T20:08:46.8280989Z Hit:7 http://ppa.launchpad.net/apt-fast/stable/ubuntu focal InRelease 2021-05-16T20:08:46.9840435Z Hit:8 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease 2021-05-16T20:08:47.1418350Z Hit:9 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-05-16T20:08:48.2519833Z Reading package lists... 2021-05-16T20:08:48.3244070Z Reading package lists... 2021-05-16T20:08:48.4660617Z Building dependency tree... 2021-05-16T20:08:48.4680775Z Reading state information... 2021-05-16T20:08:48.6070891Z libglu1-mesa-dev is already the newest version (9.0.1-1build1). 2021-05-16T20:08:48.6073917Z libicu-dev is already the newest version (66.1-2ubuntu2). 2021-05-16T20:08:48.6076274Z libicu-dev set to manually installed. 2021-05-16T20:08:48.6078615Z libpng-dev is already the newest version (1.6.37-2). 2021-05-16T20:08:48.6083433Z make is already the newest version (4.2.1-1.2). 2021-05-16T20:08:48.6084086Z make set to manually installed. 2021-05-16T20:08:48.6085052Z libssl-dev is already the newest version (1.1.1f-1ubuntu2.3). 2021-05-16T20:08:48.6086169Z zlib1g-dev is already the newest version (1:1.2.11.dfsg-2ubuntu1.2). 2021-05-16T20:08:48.6087371Z imagemagick is already the newest version (8:6.9.10.23+dfsg-2.1ubuntu11.2). 2021-05-16T20:08:48.6088369Z pandoc is already the newest version (2.7.3-1). 2021-05-16T20:08:48.6089183Z The following additional packages will be installed: 2021-05-16T20:08:48.6090528Z libbibutils6 libegl-dev libghc-pandoc-citeproc-data libgles-dev libgles1 2021-05-16T20:08:48.6091804Z libgles2 libglvnd-dev libopengl-dev libopengl0 2021-05-16T20:08:48.6092990Z Suggested packages: 2021-05-16T20:08:48.6093935Z libcurl4-doc libidn11-dev libldap2-dev librtmp-dev 2021-05-16T20:08:48.6535333Z The following NEW packages will be installed: 2021-05-16T20:08:48.6538806Z libbibutils6 libcurl4-openssl-dev libegl-dev libghc-pandoc-citeproc-data 2021-05-16T20:08:48.6542004Z libgl1-mesa-dev libgles-dev libgles1 libgles2 libglvnd-dev libopengl-dev 2021-05-16T20:08:48.6547320Z libopengl0 pandoc-citeproc 2021-05-16T20:08:48.6801509Z 0 upgraded, 12 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T20:08:48.6802201Z Need to get 13.8 MB of archives. 2021-05-16T20:08:48.6802899Z After this operation, 110 MB of additional disk space will be used. 2021-05-16T20:08:48.6804396Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbibutils6 amd64 6.2-1 [365 kB] 2021-05-16T20:08:48.6979392Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcurl4-openssl-dev amd64 7.68.0-1ubuntu2.5 [321 kB] 2021-05-16T20:08:48.7058081Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [17.2 kB] 2021-05-16T20:08:48.7063849Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgles1 amd64 1.3.2-1~ubuntu0.20.04.1 [10.3 kB] 2021-05-16T20:08:48.7067527Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgles2 amd64 1.3.2-1~ubuntu0.20.04.1 [15.6 kB] 2021-05-16T20:08:48.7072868Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgles-dev amd64 1.3.2-1~ubuntu0.20.04.1 [48.0 kB] 2021-05-16T20:08:48.7085183Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopengl0 amd64 1.3.2-1~ubuntu0.20.04.1 [29.3 kB] 2021-05-16T20:08:48.7090614Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopengl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [3584 B] 2021-05-16T20:08:48.7143282Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libghc-pandoc-citeproc-data all 0.15.0.1-1build4 [51.1 kB] 2021-05-16T20:08:48.7177095Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libglvnd-dev amd64 1.3.2-1~ubuntu0.20.04.1 [11.6 kB] 2021-05-16T20:08:48.7180452Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgl1-mesa-dev amd64 20.2.6-0ubuntu0.20.04.1 [6280 B] 2021-05-16T20:08:48.7235673Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 pandoc-citeproc amd64 0.15.0.1-1build4 [12.9 MB] 2021-05-16T20:08:49.5249614Z Fetched 13.8 MB in 0s (30.7 MB/s) 2021-05-16T20:08:49.5560104Z Selecting previously unselected package libbibutils6. 2021-05-16T20:08:49.5645386Z (Reading database ... 2021-05-16T20:08:49.5646156Z (Reading database ... 5% 2021-05-16T20:08:49.5647017Z (Reading database ... 10% 2021-05-16T20:08:49.5647653Z (Reading database ... 15% 2021-05-16T20:08:49.5648298Z (Reading database ... 20% 2021-05-16T20:08:49.5649439Z (Reading database ... 25% 2021-05-16T20:08:49.5649933Z (Reading database ... 30% 2021-05-16T20:08:49.5650403Z (Reading database ... 35% 2021-05-16T20:08:49.5650853Z (Reading database ... 40% 2021-05-16T20:08:49.5651316Z (Reading database ... 45% 2021-05-16T20:08:49.5651775Z (Reading database ... 50% 2021-05-16T20:08:49.5695033Z (Reading database ... 55% 2021-05-16T20:08:49.5742127Z (Reading database ... 60% 2021-05-16T20:08:49.5785111Z (Reading database ... 65% 2021-05-16T20:08:49.5958262Z (Reading database ... 70% 2021-05-16T20:08:49.5990029Z (Reading database ... 75% 2021-05-16T20:08:49.6238244Z (Reading database ... 80% 2021-05-16T20:08:49.6327746Z (Reading database ... 85% 2021-05-16T20:08:49.6703191Z (Reading database ... 90% 2021-05-16T20:08:49.6778681Z (Reading database ... 95% 2021-05-16T20:08:49.6779251Z (Reading database ... 100% 2021-05-16T20:08:49.6780099Z (Reading database ... 285139 files and directories currently installed.) 2021-05-16T20:08:49.6899077Z Preparing to unpack .../00-libbibutils6_6.2-1_amd64.deb ... 2021-05-16T20:08:49.6916134Z Unpacking libbibutils6 (6.2-1) ... 2021-05-16T20:08:49.7628755Z Selecting previously unselected package libcurl4-openssl-dev:amd64. 2021-05-16T20:08:49.7880124Z Preparing to unpack .../01-libcurl4-openssl-dev_7.68.0-1ubuntu2.5_amd64.deb ... 2021-05-16T20:08:49.7887749Z Unpacking libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-05-16T20:08:49.8414355Z Selecting previously unselected package libegl-dev:amd64. 2021-05-16T20:08:49.8684248Z Preparing to unpack .../02-libegl-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T20:08:49.8693715Z Unpacking libegl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:08:49.8973204Z Selecting previously unselected package libgles1:amd64. 2021-05-16T20:08:49.9219780Z Preparing to unpack .../03-libgles1_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T20:08:49.9234939Z Unpacking libgles1:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:08:49.9492039Z Selecting previously unselected package libgles2:amd64. 2021-05-16T20:08:49.9740519Z Preparing to unpack .../04-libgles2_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T20:08:49.9749056Z Unpacking libgles2:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:08:49.9950221Z Selecting previously unselected package libgles-dev:amd64. 2021-05-16T20:08:50.0242643Z Preparing to unpack .../05-libgles-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T20:08:50.0250934Z Unpacking libgles-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:08:50.0573591Z Selecting previously unselected package libopengl0:amd64. 2021-05-16T20:08:50.0807357Z Preparing to unpack .../06-libopengl0_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T20:08:50.0817534Z Unpacking libopengl0:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:08:50.1094576Z Selecting previously unselected package libopengl-dev:amd64. 2021-05-16T20:08:50.1340710Z Preparing to unpack .../07-libopengl-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T20:08:50.1348828Z Unpacking libopengl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:08:50.1654420Z Selecting previously unselected package libghc-pandoc-citeproc-data. 2021-05-16T20:08:50.1865013Z Preparing to unpack .../08-libghc-pandoc-citeproc-data_0.15.0.1-1build4_all.deb ... 2021-05-16T20:08:50.1875656Z Unpacking libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-05-16T20:08:50.2175563Z Selecting previously unselected package libglvnd-dev:amd64. 2021-05-16T20:08:50.2434044Z Preparing to unpack .../09-libglvnd-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T20:08:50.2443402Z Unpacking libglvnd-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:08:50.2734130Z Selecting previously unselected package libgl1-mesa-dev:amd64. 2021-05-16T20:08:50.2979805Z Preparing to unpack .../10-libgl1-mesa-dev_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-16T20:08:50.2990140Z Unpacking libgl1-mesa-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T20:08:50.3196787Z Selecting previously unselected package pandoc-citeproc. 2021-05-16T20:08:50.3495788Z Preparing to unpack .../11-pandoc-citeproc_0.15.0.1-1build4_amd64.deb ... 2021-05-16T20:08:50.3503825Z Unpacking pandoc-citeproc (0.15.0.1-1build4) ... 2021-05-16T20:08:50.3533926Z Replaced by files in installed package pandoc (2.7.3-1) ... 2021-05-16T20:08:51.6576411Z Setting up libegl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:08:51.6597068Z Setting up libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-05-16T20:08:51.6613335Z Setting up libopengl0:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:08:51.6631013Z Setting up libbibutils6 (6.2-1) ... 2021-05-16T20:08:51.6656968Z Setting up libgles2:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:08:51.6675547Z Setting up libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-05-16T20:08:51.6692910Z Setting up libgles1:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:08:51.6710433Z Setting up libopengl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:08:51.6732676Z Setting up libgles-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:08:51.6749203Z Setting up pandoc-citeproc (0.15.0.1-1build4) ... 2021-05-16T20:08:51.6765612Z Setting up libglvnd-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T20:08:51.6790292Z Setting up libgl1-mesa-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T20:08:51.6812373Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T20:08:54.7305866Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T20:08:56.5759343Z ##[group]Run remotes::install_github("ropensci/tic") 2021-05-16T20:08:56.5760037Z remotes::install_github("ropensci/tic") 2021-05-16T20:08:56.5760657Z remotes::install_github("muschellij2/ghtravis") 2021-05-16T20:08:56.5761301Z remotes::install_github("muschellij2/aghast") 2021-05-16T20:08:56.5761866Z remotes::install_cran("covr") 2021-05-16T20:08:56.5768642Z shell: /usr/local/bin/Rscript {0} 2021-05-16T20:08:56.5769043Z env: 2021-05-16T20:08:56.5769510Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:08:56.5769949Z TIC_DEPLOY_KEY: 2021-05-16T20:08:56.5770695Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:08:56.5772420Z GITHUB_PAT: *** 2021-05-16T20:08:56.5772804Z COVERALLS_TOKEN: 2021-05-16T20:08:56.5773245Z continue-on-error: true 2021-05-16T20:08:56.5773689Z VDIFFR_RUN_TESTS: 2021-05-16T20:08:56.5774132Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:08:56.5774577Z TZ: UTC 2021-05-16T20:08:56.5774944Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:08:56.5775318Z NOT_CRAN: true 2021-05-16T20:08:56.5775670Z ##[endgroup] 2021-05-16T20:08:56.7615181Z Using github PAT from envvar GITHUB_PAT 2021-05-16T20:08:57.2678466Z Downloading GitHub repo ropensci/tic@HEAD 2021-05-16T20:09:12.9254256Z rlang (NA -> 0.4.11) [CRAN] 2021-05-16T20:09:12.9257010Z magrittr (NA -> 2.0.1 ) [CRAN] 2021-05-16T20:09:12.9260563Z glue (NA -> 1.4.2 ) [CRAN] 2021-05-16T20:09:12.9261223Z sys (NA -> 3.4 ) [CRAN] 2021-05-16T20:09:12.9261888Z askpass (NA -> 1.1 ) [CRAN] 2021-05-16T20:09:12.9262572Z openssl (NA -> 1.4.4 ) [CRAN] 2021-05-16T20:09:12.9263214Z mime (NA -> 0.10 ) [CRAN] 2021-05-16T20:09:12.9263853Z curl (NA -> 4.3.1 ) [CRAN] 2021-05-16T20:09:12.9264497Z jsonlite (NA -> 1.7.2 ) [CRAN] 2021-05-16T20:09:12.9265144Z ini (NA -> 0.3.1 ) [CRAN] 2021-05-16T20:09:12.9265758Z httr (NA -> 1.4.2 ) [CRAN] 2021-05-16T20:09:12.9266437Z gitcreds (NA -> 0.1.1 ) [CRAN] 2021-05-16T20:09:12.9267072Z cli (NA -> 2.5.0 ) [CRAN] 2021-05-16T20:09:12.9267698Z zip (NA -> 2.1.1 ) [CRAN] 2021-05-16T20:09:12.9268366Z rstudioapi (NA -> 0.13 ) [CRAN] 2021-05-16T20:09:12.9269061Z credentials (NA -> 1.3.0 ) [CRAN] 2021-05-16T20:09:12.9269757Z fastmap (NA -> 1.1.0 ) [CRAN] 2021-05-16T20:09:12.9270390Z yaml (NA -> 2.2.1 ) [CRAN] 2021-05-16T20:09:12.9271025Z withr (NA -> 2.4.2 ) [CRAN] 2021-05-16T20:09:12.9271930Z whisker (NA -> 0.4 ) [CRAN] 2021-05-16T20:09:12.9272606Z rappdirs (NA -> 0.3.3 ) [CRAN] 2021-05-16T20:09:12.9273256Z purrr (NA -> 0.3.4 ) [CRAN] 2021-05-16T20:09:12.9273939Z lifecycle (NA -> 1.0.0 ) [CRAN] 2021-05-16T20:09:12.9274602Z gh (NA -> 1.3.0 ) [CRAN] 2021-05-16T20:09:12.9275231Z gert (NA -> 1.3.0 ) [CRAN] 2021-05-16T20:09:12.9275861Z fs (NA -> 1.5.0 ) [CRAN] 2021-05-16T20:09:12.9276485Z clipr (NA -> 0.7.1 ) [CRAN] 2021-05-16T20:09:12.9277143Z cachem (NA -> 1.0.5 ) [CRAN] 2021-05-16T20:09:12.9277791Z usethis (NA -> 2.0.1 ) [CRAN] 2021-05-16T20:09:12.9278457Z memoise (NA -> 2.0.0 ) [CRAN] 2021-05-16T20:09:12.9279095Z git2r (NA -> 0.28.0) [CRAN] 2021-05-16T20:09:12.9283896Z Installing 31 packages: rlang, magrittr, glue, sys, askpass, openssl, mime, curl, jsonlite, ini, httr, gitcreds, cli, zip, rstudioapi, credentials, fastmap, yaml, withr, whisker, rappdirs, purrr, lifecycle, gh, gert, fs, clipr, cachem, usethis, memoise, git2r 2021-05-16T20:09:12.9295095Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:09:12.9295819Z (as ‘lib’ is unspecified) 2021-05-16T20:09:26.9584492Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rlang_0.4.11.tar.gz' 2021-05-16T20:09:27.2292579Z Content type 'binary/octet-stream' length 859995 bytes (839 KB) 2021-05-16T20:09:27.2543146Z ================================================== 2021-05-16T20:09:27.2543709Z downloaded 839 KB 2021-05-16T20:09:27.2545578Z 2021-05-16T20:09:27.2581059Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/magrittr_2.0.1.tar.gz' 2021-05-16T20:09:27.5518699Z Content type 'binary/octet-stream' length 264532 bytes (258 KB) 2021-05-16T20:09:27.6632008Z ================================================== 2021-05-16T20:09:27.6632644Z downloaded 258 KB 2021-05-16T20:09:27.6632946Z 2021-05-16T20:09:27.6675801Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/glue_1.4.2.tar.gz' 2021-05-16T20:09:28.0557003Z Content type 'binary/octet-stream' length 100043 bytes (97 KB) 2021-05-16T20:09:28.0606127Z ================================================== 2021-05-16T20:09:28.0607045Z downloaded 97 KB 2021-05-16T20:09:28.0607575Z 2021-05-16T20:09:28.0643555Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sys_3.4.tar.gz' 2021-05-16T20:09:28.2319976Z Content type 'binary/octet-stream' length 20291 bytes (19 KB) 2021-05-16T20:09:28.2321522Z ================================================== 2021-05-16T20:09:28.2322252Z downloaded 19 KB 2021-05-16T20:09:28.2322766Z 2021-05-16T20:09:28.2353069Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/askpass_1.1.tar.gz' 2021-05-16T20:09:28.5037622Z Content type 'application/x-tar' length 5688 bytes 2021-05-16T20:09:28.5039114Z ================================================== 2021-05-16T20:09:28.5039842Z downloaded 5688 bytes 2021-05-16T20:09:28.5040390Z 2021-05-16T20:09:28.5073990Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/openssl_1.4.4.tar.gz' 2021-05-16T20:09:28.7815317Z Content type 'binary/octet-stream' length 1311683 bytes (1.3 MB) 2021-05-16T20:09:28.8112018Z ================================================== 2021-05-16T20:09:28.8112860Z downloaded 1.3 MB 2021-05-16T20:09:28.8113322Z 2021-05-16T20:09:28.8145999Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/mime_0.10.tar.gz' 2021-05-16T20:09:28.9873978Z Content type 'binary/octet-stream' length 12958 bytes (12 KB) 2021-05-16T20:09:28.9875501Z ================================================== 2021-05-16T20:09:28.9876226Z downloaded 12 KB 2021-05-16T20:09:28.9876738Z 2021-05-16T20:09:28.9909954Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/curl_4.3.1.tar.gz' 2021-05-16T20:09:29.2592151Z Content type 'binary/octet-stream' length 798588 bytes (779 KB) 2021-05-16T20:09:29.2863762Z ================================================== 2021-05-16T20:09:29.2864505Z downloaded 779 KB 2021-05-16T20:09:29.2865022Z 2021-05-16T20:09:29.2902272Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/jsonlite_1.7.2.tar.gz' 2021-05-16T20:09:29.5593313Z Content type 'binary/octet-stream' length 422264 bytes (412 KB) 2021-05-16T20:09:29.5783697Z ================================================== 2021-05-16T20:09:29.5784259Z downloaded 412 KB 2021-05-16T20:09:29.5784613Z 2021-05-16T20:09:29.5824765Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ini_0.3.1.tar.gz' 2021-05-16T20:09:29.7568971Z Content type 'application/x-tar' length 3475 bytes 2021-05-16T20:09:29.7570541Z ================================================== 2021-05-16T20:09:29.7571282Z downloaded 3475 bytes 2021-05-16T20:09:29.7571800Z 2021-05-16T20:09:29.7603003Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/httr_1.4.2.tar.gz' 2021-05-16T20:09:29.9623490Z Content type 'binary/octet-stream' length 159877 bytes (156 KB) 2021-05-16T20:09:29.9741127Z ================================================== 2021-05-16T20:09:29.9741599Z downloaded 156 KB 2021-05-16T20:09:29.9741907Z 2021-05-16T20:09:29.9777057Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gitcreds_0.1.1.tar.gz' 2021-05-16T20:09:30.6989934Z Content type 'binary/octet-stream' length 62129 bytes (60 KB) 2021-05-16T20:09:30.6991742Z ================================================== 2021-05-16T20:09:30.6992440Z downloaded 60 KB 2021-05-16T20:09:30.6992875Z 2021-05-16T20:09:30.7029172Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cli_2.5.0.tar.gz' 2021-05-16T20:09:31.0915883Z Content type 'binary/octet-stream' length 158132 bytes (154 KB) 2021-05-16T20:09:31.1039329Z ================================================== 2021-05-16T20:09:31.1039858Z downloaded 154 KB 2021-05-16T20:09:31.1040151Z 2021-05-16T20:09:31.1075773Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/zip_2.1.1.tar.gz' 2021-05-16T20:09:31.4255744Z Content type 'binary/octet-stream' length 113091 bytes (110 KB) 2021-05-16T20:09:31.4373029Z ================================================== 2021-05-16T20:09:31.4373739Z downloaded 110 KB 2021-05-16T20:09:31.4374051Z 2021-05-16T20:09:31.4410457Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rstudioapi_0.13.tar.gz' 2021-05-16T20:09:31.7178031Z Content type 'binary/octet-stream' length 109870 bytes (107 KB) 2021-05-16T20:09:31.7281457Z ================================================== 2021-05-16T20:09:31.7281932Z downloaded 107 KB 2021-05-16T20:09:31.7282205Z 2021-05-16T20:09:31.7321049Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/credentials_1.3.0.tar.gz' 2021-05-16T20:09:32.1228188Z Content type 'binary/octet-stream' length 230676 bytes (225 KB) 2021-05-16T20:09:32.1403156Z ================================================== 2021-05-16T20:09:32.1403707Z downloaded 225 KB 2021-05-16T20:09:32.1404020Z 2021-05-16T20:09:32.1444407Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fastmap_1.1.0.tar.gz' 2021-05-16T20:09:32.5634748Z Content type 'binary/octet-stream' length 44517 bytes (43 KB) 2021-05-16T20:09:32.5691599Z ================================================== 2021-05-16T20:09:32.5692911Z downloaded 43 KB 2021-05-16T20:09:32.5693321Z 2021-05-16T20:09:32.5733423Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/yaml_2.2.1.tar.gz' 2021-05-16T20:09:33.2293280Z Content type 'binary/octet-stream' length 92979 bytes (90 KB) 2021-05-16T20:09:33.2343537Z ================================================== 2021-05-16T20:09:33.2344107Z downloaded 90 KB 2021-05-16T20:09:33.2344414Z 2021-05-16T20:09:33.2383608Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/withr_2.4.2.tar.gz' 2021-05-16T20:09:33.4248163Z Content type 'binary/octet-stream' length 95150 bytes (92 KB) 2021-05-16T20:09:33.4334637Z ================================================== 2021-05-16T20:09:33.4335173Z downloaded 92 KB 2021-05-16T20:09:33.4335482Z 2021-05-16T20:09:33.4440800Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/whisker_0.4.tar.gz' 2021-05-16T20:09:34.1428019Z Content type 'application/x-tar' length 28675 bytes (28 KB) 2021-05-16T20:09:34.1429627Z ================================================== 2021-05-16T20:09:34.1430436Z downloaded 28 KB 2021-05-16T20:09:34.1431374Z 2021-05-16T20:09:34.1470469Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rappdirs_0.3.3.tar.gz' 2021-05-16T20:09:36.3764884Z Content type 'binary/octet-stream' length 12326 bytes (12 KB) 2021-05-16T20:09:36.3766233Z ================================================== 2021-05-16T20:09:36.3766869Z downloaded 12 KB 2021-05-16T20:09:36.3767322Z 2021-05-16T20:09:36.3800732Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/purrr_0.3.4.tar.gz' 2021-05-16T20:09:36.6654767Z Content type 'binary/octet-stream' length 373001 bytes (364 KB) 2021-05-16T20:09:36.6875611Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gert_1.3.0.tar.gz' 2021-05-16T20:09:38.0923871Z Content type 'binary/octet-stream' length 66528 bytes (64 KB) 2021-05-16T20:09:38.0929378Z ================================================== 2021-05-16T20:09:38.0929854Z downloaded 64 KB 2021-05-16T20:09:38.0930189Z 2021-05-16T20:09:38.0970682Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fs_1.5.0.tar.gz' 2021-05-16T20:09:38.3860392Z Content type 'binary/octet-stream' length 800044 bytes (781 KB) 2021-05-16T20:09:38.4127931Z ================================================== 2021-05-16T20:09:38.4128502Z downloaded 781 KB 2021-05-16T20:09:38.4129740Z 2021-05-16T20:09:38.4169428Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/clipr_0.7.1.tar.gz' 2021-05-16T20:09:39.3566061Z Content type 'binary/octet-stream' length 20919 bytes (20 KB) 2021-05-16T20:09:39.3570841Z ================================================== 2021-05-16T20:09:39.3571622Z downloaded 20 KB 2021-05-16T20:09:39.3572311Z 2021-05-16T20:09:39.3609700Z trying URL 'https://cloud.r-project.org/src/contrib/cachem_1.0.5.tar.gz' 2021-05-16T20:09:39.4928687Z Content type 'application/x-gzip' length 24974 bytes (24 KB) 2021-05-16T20:09:39.4929987Z ================================================== 2021-05-16T20:09:39.4930677Z downloaded 24 KB 2021-05-16T20:09:39.4931178Z 2021-05-16T20:09:39.4949679Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/usethis_2.0.1.tar.gz' 2021-05-16T20:09:39.7959087Z Content type 'binary/octet-stream' length 304209 bytes (297 KB) 2021-05-16T20:09:39.8166431Z ================================================== 2021-05-16T20:09:39.8167275Z downloaded 297 KB 2021-05-16T20:09:39.8168119Z 2021-05-16T20:09:39.8206407Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/memoise_2.0.0.tar.gz' 2021-05-16T20:09:40.4255193Z Content type 'binary/octet-stream' length 17411 bytes (17 KB) 2021-05-16T20:09:40.4257157Z ================================================== 2021-05-16T20:09:40.4257620Z downloaded 17 KB 2021-05-16T20:09:40.4257924Z 2021-05-16T20:09:40.4296965Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/git2r_0.28.0.tar.gz' 2021-05-16T20:09:41.4981121Z Content type 'binary/octet-stream' length 1223574 bytes (1.2 MB) 2021-05-16T20:09:41.5363178Z ================================================== 2021-05-16T20:09:41.5364023Z downloaded 1.2 MB 2021-05-16T20:09:41.5364561Z 2021-05-16T20:09:42.0058430Z * installing *source* package ‘rlang’ ... 2021-05-16T20:09:42.0183815Z ** package ‘rlang’ successfully unpacked and MD5 sums checked 2021-05-16T20:09:42.0185062Z ** using staged installation 2021-05-16T20:09:42.0355919Z ** libs 2021-05-16T20:09:42.0417491Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c capture.c -o capture.o 2021-05-16T20:09:42.2725134Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c export.c -o export.o 2021-05-16T20:09:42.5976542Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c internal.c -o internal.o 2021-05-16T20:09:44.7358677Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c lib.c -o lib.o 2021-05-16T20:09:45.6571889Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-16T20:09:45.6935034Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o version.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:09:45.8621642Z installing to /home/runner/work/_temp/Library/00LOCK-rlang/00new/rlang/libs 2021-05-16T20:09:45.8647320Z ** R 2021-05-16T20:09:45.9079192Z ** inst 2021-05-16T20:09:45.9086855Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:09:48.9689891Z ** help 2021-05-16T20:09:49.6284707Z *** installing help indices 2021-05-16T20:09:49.9054782Z *** copying figures 2021-05-16T20:09:49.9059448Z ** building package indices 2021-05-16T20:09:50.3443235Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:09:50.5599981Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:09:50.6787224Z ** testing if installed package can be loaded from final location 2021-05-16T20:09:50.9231498Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:09:50.9266715Z * DONE (rlang) 2021-05-16T20:09:51.1680406Z * installing *source* package ‘magrittr’ ... 2021-05-16T20:09:51.1704131Z ** package ‘magrittr’ successfully unpacked and MD5 sums checked 2021-05-16T20:09:51.1705241Z ** using staged installation 2021-05-16T20:09:51.1823112Z ** libs 2021-05-16T20:09:51.1872343Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pipe.c -o pipe.o 2021-05-16T20:09:51.3059084Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T20:09:51.3562584Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o magrittr.so pipe.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:09:51.3778372Z installing to /home/runner/work/_temp/Library/00LOCK-magrittr/00new/magrittr/libs 2021-05-16T20:09:51.3791120Z ** R 2021-05-16T20:09:51.3829526Z ** inst 2021-05-16T20:09:51.3843158Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:09:51.6537007Z ** help 2021-05-16T20:09:51.6929726Z *** installing help indices 2021-05-16T20:09:51.7213141Z *** copying figures 2021-05-16T20:09:51.7216094Z ** building package indices 2021-05-16T20:09:51.9201774Z ** installing vignettes 2021-05-16T20:09:51.9202594Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:09:52.0857806Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:09:52.1029701Z ** testing if installed package can be loaded from final location 2021-05-16T20:09:52.2658601Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:09:52.2665363Z * DONE (magrittr) 2021-05-16T20:09:52.4964639Z * installing *source* package ‘glue’ ... 2021-05-16T20:09:52.4983192Z ** package ‘glue’ successfully unpacked and MD5 sums checked 2021-05-16T20:09:52.4984245Z ** using staged installation 2021-05-16T20:09:52.5125574Z ** libs 2021-05-16T20:09:52.5172958Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c glue.c -o glue.o 2021-05-16T20:09:52.6285736Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:09:52.6700007Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c trim.c -o trim.o 2021-05-16T20:09:52.7471231Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o glue.so glue.o init.o trim.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:09:52.7693735Z installing to /home/runner/work/_temp/Library/00LOCK-glue/00new/glue/libs 2021-05-16T20:09:52.7703904Z ** R 2021-05-16T20:09:52.7752532Z ** inst 2021-05-16T20:09:52.7763675Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:09:53.2217075Z ** help 2021-05-16T20:09:53.2501351Z *** installing help indices 2021-05-16T20:09:53.2795196Z *** copying figures 2021-05-16T20:09:53.2797705Z ** building package indices 2021-05-16T20:09:53.4710840Z ** installing vignettes 2021-05-16T20:09:53.4767272Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:09:53.6919397Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:09:53.7090063Z ** testing if installed package can be loaded from final location 2021-05-16T20:09:53.9169109Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:09:53.9177625Z * DONE (glue) 2021-05-16T20:09:54.1229135Z * installing *source* package ‘sys’ ... 2021-05-16T20:09:54.1240786Z ** package ‘sys’ successfully unpacked and MD5 sums checked 2021-05-16T20:09:54.1241725Z ** using staged installation 2021-05-16T20:09:54.1421249Z ** libs 2021-05-16T20:09:54.1467873Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c exec.c -o exec.o 2021-05-16T20:09:54.4430076Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:09:54.4858063Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o sys.so exec.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:09:54.5093871Z installing to /home/runner/work/_temp/Library/00LOCK-sys/00new/sys/libs 2021-05-16T20:09:54.5094915Z ** R 2021-05-16T20:09:54.5111727Z ** inst 2021-05-16T20:09:54.5119762Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:09:54.7730725Z ** help 2021-05-16T20:09:54.7921257Z *** installing help indices 2021-05-16T20:09:54.8108060Z ** building package indices 2021-05-16T20:09:54.9946958Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:09:55.1622282Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:09:55.1796236Z ** testing if installed package can be loaded from final location 2021-05-16T20:09:55.3437190Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:09:55.3442527Z * DONE (sys) 2021-05-16T20:09:55.5375050Z * installing *source* package ‘mime’ ... 2021-05-16T20:09:55.5383373Z ** package ‘mime’ successfully unpacked and MD5 sums checked 2021-05-16T20:09:55.5384414Z ** using staged installation 2021-05-16T20:09:55.5507974Z ** libs 2021-05-16T20:09:55.5552897Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:09:55.5981631Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rawmatch.c -o rawmatch.o 2021-05-16T20:09:55.6507550Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o mime.so init.o rawmatch.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:09:55.6648534Z installing to /home/runner/work/_temp/Library/00LOCK-mime/00new/mime/libs 2021-05-16T20:09:55.6662881Z ** R 2021-05-16T20:09:55.6715967Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:09:55.9725744Z ** help 2021-05-16T20:09:55.9927019Z *** installing help indices 2021-05-16T20:09:56.0077823Z ** building package indices 2021-05-16T20:09:56.1859141Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:09:56.3553089Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:09:56.3726306Z ** testing if installed package can be loaded from final location 2021-05-16T20:09:56.5379073Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:09:56.5385790Z * DONE (mime) 2021-05-16T20:09:56.8656509Z * installing *source* package ‘curl’ ... 2021-05-16T20:09:56.8733874Z ** package ‘curl’ successfully unpacked and MD5 sums checked 2021-05-16T20:09:56.8734949Z ** using staged installation 2021-05-16T20:09:56.8875726Z Found pkg-config cflags and libs! 2021-05-16T20:09:56.9683954Z Using PKG_CFLAGS=-I/usr/include/x86_64-linux-gnu 2021-05-16T20:09:56.9685160Z Using PKG_LIBS=-lcurl 2021-05-16T20:09:57.0413016Z ** libs 2021-05-16T20:09:57.0464608Z rm -f curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o 2021-05-16T20:09:57.0490174Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c callbacks.c -o callbacks.o 2021-05-16T20:09:57.1208499Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c curl.c -o curl.o 2021-05-16T20:09:57.2411206Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c download.c -o download.o 2021-05-16T20:09:57.3218545Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c escape.c -o escape.o 2021-05-16T20:09:57.3758284Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fetch.c -o fetch.o 2021-05-16T20:09:57.4757033Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c form.c -o form.o 2021-05-16T20:09:57.5435036Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c getdate.c -o getdate.o 2021-05-16T20:09:57.5944332Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c handle.c -o handle.o 2021-05-16T20:09:57.9059381Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ieproxy.c -o ieproxy.o 2021-05-16T20:09:57.9424530Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:09:57.9943516Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c interrupt.c -o interrupt.o 2021-05-16T20:09:58.0566441Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c multi.c -o multi.o 2021-05-16T20:09:58.2231574Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c nslookup.c -o nslookup.o 2021-05-16T20:09:58.2988898Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c reflist.c -o reflist.o 2021-05-16T20:09:58.3520562Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c split.c -o split.o 2021-05-16T20:09:58.3927010Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ssl.c -o ssl.o 2021-05-16T20:09:58.4362671Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typechecking.c -o typechecking.o 2021-05-16T20:09:58.4894321Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T20:09:58.6036014Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-16T20:09:58.6676442Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c winidn.c -o winidn.o 2021-05-16T20:09:58.6865346Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c writer.c -o writer.o 2021-05-16T20:09:58.7343004Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o -lcurl -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:09:58.7654737Z installing to /home/runner/work/_temp/Library/00LOCK-curl/00new/curl/libs 2021-05-16T20:09:58.7655998Z ** R 2021-05-16T20:09:58.7767572Z ** inst 2021-05-16T20:09:58.7800567Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:09:59.2604127Z ** help 2021-05-16T20:09:59.3049416Z *** installing help indices 2021-05-16T20:09:59.3365554Z ** building package indices 2021-05-16T20:09:59.5373384Z ** installing vignettes 2021-05-16T20:09:59.5400605Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:09:59.7178646Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:09:59.7354095Z ** testing if installed package can be loaded from final location 2021-05-16T20:09:59.9150886Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:09:59.9161455Z * DONE (curl) 2021-05-16T20:10:00.2321900Z * installing *source* package ‘jsonlite’ ... 2021-05-16T20:10:00.2374556Z ** package ‘jsonlite’ successfully unpacked and MD5 sums checked 2021-05-16T20:10:00.2375748Z ** using staged installation 2021-05-16T20:10:00.2508688Z ** libs 2021-05-16T20:10:00.2563880Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T20:10:00.3218916Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_array.c -o collapse_array.o 2021-05-16T20:10:00.3759124Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_object.c -o collapse_object.o 2021-05-16T20:10:00.4363898Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_pretty.c -o collapse_pretty.o 2021-05-16T20:10:00.5394884Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c escape_chars.c -o escape_chars.o 2021-05-16T20:10:00.6062681Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c integer64_to_na.c -o integer64_to_na.o 2021-05-16T20:10:00.6530228Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_datelist.c -o is_datelist.o 2021-05-16T20:10:00.7014572Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_recordlist.c -o is_recordlist.o 2021-05-16T20:10:00.7532546Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_scalarlist.c -o is_scalarlist.o 2021-05-16T20:10:00.7998610Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c modp_numtoa.c -o modp_numtoa.o 2021-05-16T20:10:00.9228437Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c null_to_na.c -o null_to_na.o 2021-05-16T20:10:00.9859453Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c num_to_char.c -o num_to_char.o 2021-05-16T20:10:01.0627418Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c parse.c -o parse.o 2021-05-16T20:10:01.1280600Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c prettify.c -o prettify.o 2021-05-16T20:10:01.1913336Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c push_parser.c -o push_parser.o 2021-05-16T20:10:01.2442787Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c r-base64.c -o r-base64.o 2021-05-16T20:10:01.2942882Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c register.c -o register.o 2021-05-16T20:10:01.3354904Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c row_collapse.c -o row_collapse.o 2021-05-16T20:10:01.3981181Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c transpose_list.c -o transpose_list.o 2021-05-16T20:10:01.4462208Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c validate.c -o validate.o 2021-05-16T20:10:01.4927596Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl.c -o yajl/yajl.o 2021-05-16T20:10:01.5505708Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o 2021-05-16T20:10:01.5791452Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_buf.c -o yajl/yajl_buf.o 2021-05-16T20:10:01.6226724Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_encode.c -o yajl/yajl_encode.o 2021-05-16T20:10:01.7141765Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_gen.c -o yajl/yajl_gen.o 2021-05-16T20:10:01.9402604Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_lex.c -o yajl/yajl_lex.o 2021-05-16T20:10:02.1875039Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_parser.c -o yajl/yajl_parser.o 2021-05-16T20:10:02.3519227Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_tree.c -o yajl/yajl_tree.o 2021-05-16T20:10:02.4835347Z ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o 2021-05-16T20:10:02.5011187Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:10:02.5334841Z installing to /home/runner/work/_temp/Library/00LOCK-jsonlite/00new/jsonlite/libs 2021-05-16T20:10:02.5336170Z ** R 2021-05-16T20:10:02.5493847Z ** inst 2021-05-16T20:10:02.5511421Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:10:03.5104520Z in method for ‘asJSON’ with signature ‘"blob"’: no definition for class “blob” 2021-05-16T20:10:03.5106515Z ** help 2021-05-16T20:10:03.5401650Z *** installing help indices 2021-05-16T20:10:03.5651780Z ** building package indices 2021-05-16T20:10:03.7535809Z ** installing vignettes 2021-05-16T20:10:03.7604288Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:10:03.9435997Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:10:03.9649425Z ** testing if installed package can be loaded from final location 2021-05-16T20:10:04.1615905Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:10:04.1629595Z * DONE (jsonlite) 2021-05-16T20:10:04.3570387Z * installing *source* package ‘ini’ ... 2021-05-16T20:10:04.3581160Z ** package ‘ini’ successfully unpacked and MD5 sums checked 2021-05-16T20:10:04.3584874Z ** using staged installation 2021-05-16T20:10:04.3688116Z ** R 2021-05-16T20:10:04.3714389Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:10:04.5970377Z ** help 2021-05-16T20:10:04.6088277Z *** installing help indices 2021-05-16T20:10:04.6308832Z ** building package indices 2021-05-16T20:10:04.8098558Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:10:04.9745197Z ** testing if installed package can be loaded from final location 2021-05-16T20:10:05.1400408Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:10:05.1405882Z * DONE (ini) 2021-05-16T20:10:05.3664935Z * installing *source* package ‘gitcreds’ ... 2021-05-16T20:10:05.3683008Z ** package ‘gitcreds’ successfully unpacked and MD5 sums checked 2021-05-16T20:10:05.3684061Z ** using staged installation 2021-05-16T20:10:05.3787953Z ** R 2021-05-16T20:10:05.3843798Z ** inst 2021-05-16T20:10:05.3854290Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:10:05.8493112Z ** help 2021-05-16T20:10:05.8721056Z *** installing help indices 2021-05-16T20:10:05.8940144Z ** building package indices 2021-05-16T20:10:06.0807423Z ** installing vignettes 2021-05-16T20:10:06.0860396Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:10:06.2524925Z ** testing if installed package can be loaded from final location 2021-05-16T20:10:06.4204476Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:10:06.4213045Z * DONE (gitcreds) 2021-05-16T20:10:06.6562993Z * installing *source* package ‘zip’ ... 2021-05-16T20:10:06.6589071Z ** package ‘zip’ successfully unpacked and MD5 sums checked 2021-05-16T20:10:06.6590201Z ** using staged installation 2021-05-16T20:10:06.6689256Z ** libs 2021-05-16T20:10:06.6738251Z gcc -g -O2 miniz.c zip.c unixutils.c tools/cmdzip.c -o tools/cmdzip 2021-05-16T20:10:09.2697464Z gcc -g -O2 miniz.c zip.c unixutils.c tools/cmdunzip.c -o tools/cmdunzip 2021-05-16T20:10:11.8218500Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:10:11.8642909Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c miniz.c -o miniz.o 2021-05-16T20:10:14.1826690Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rzip.c -o rzip.o 2021-05-16T20:10:14.2721983Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c zip.c -o zip.o 2021-05-16T20:10:14.3962468Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unixutils.c -o unixutils.o 2021-05-16T20:10:14.4550325Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o zip.so init.o miniz.o rzip.o zip.o unixutils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:10:14.4814411Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-zip/00new/zip 2021-05-16T20:10:14.4851216Z ** R 2021-05-16T20:10:14.4888370Z ** inst 2021-05-16T20:10:14.4897968Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:10:14.8013267Z ** help 2021-05-16T20:10:14.8144174Z *** installing help indices 2021-05-16T20:10:14.8371659Z ** building package indices 2021-05-16T20:10:15.0214138Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:10:15.1930909Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:10:15.2112494Z ** testing if installed package can be loaded from final location 2021-05-16T20:10:15.3799904Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:10:15.3806614Z * DONE (zip) 2021-05-16T20:10:15.6598433Z * installing *source* package ‘rstudioapi’ ... 2021-05-16T20:10:15.6636493Z ** package ‘rstudioapi’ successfully unpacked and MD5 sums checked 2021-05-16T20:10:15.6637699Z ** using staged installation 2021-05-16T20:10:15.6754273Z ** R 2021-05-16T20:10:15.6850594Z ** inst 2021-05-16T20:10:15.6867693Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:10:16.1649989Z ** help 2021-05-16T20:10:16.3237070Z *** installing help indices 2021-05-16T20:10:16.4294567Z *** copying figures 2021-05-16T20:10:16.4297632Z ** building package indices 2021-05-16T20:10:16.7053294Z ** installing vignettes 2021-05-16T20:10:16.7098703Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:10:16.8759278Z ** testing if installed package can be loaded from final location 2021-05-16T20:10:17.0447618Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:10:17.0457914Z * DONE (rstudioapi) 2021-05-16T20:10:17.2581287Z * installing *source* package ‘fastmap’ ... 2021-05-16T20:10:17.2596801Z ** package ‘fastmap’ successfully unpacked and MD5 sums checked 2021-05-16T20:10:17.2597997Z ** using staged installation 2021-05-16T20:10:17.2757796Z ** libs 2021-05-16T20:10:17.2808868Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilib/ -I/usr/local/include -DR_NO_REMAP -fpic -g -O2 -c fastmap.cpp -o fastmap.o 2021-05-16T20:10:20.9018159Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilib/ -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:10:20.9459459Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fastmap.so fastmap.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:10:21.0059894Z installing to /home/runner/work/_temp/Library/00LOCK-fastmap/00new/fastmap/libs 2021-05-16T20:10:21.0081109Z ** R 2021-05-16T20:10:21.0128371Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:10:21.4067381Z ** help 2021-05-16T20:10:21.4241686Z *** installing help indices 2021-05-16T20:10:21.4417375Z ** building package indices 2021-05-16T20:10:21.6229644Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:10:21.7908048Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:10:21.8091954Z ** testing if installed package can be loaded from final location 2021-05-16T20:10:21.9764920Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:10:21.9772724Z * DONE (fastmap) 2021-05-16T20:10:22.2103475Z * installing *source* package ‘yaml’ ... 2021-05-16T20:10:22.2128149Z ** package ‘yaml’ successfully unpacked and MD5 sums checked 2021-05-16T20:10:22.2129285Z ** using staged installation 2021-05-16T20:10:22.2218078Z ** libs 2021-05-16T20:10:22.2271300Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api.c -o api.o 2021-05-16T20:10:22.5410656Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dumper.c -o dumper.o 2021-05-16T20:10:22.6451655Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c emitter.c -o emitter.o 2021-05-16T20:10:23.5200975Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c implicit.c -o implicit.o 2021-05-16T20:10:23.6750447Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c loader.c -o loader.o 2021-05-16T20:10:23.7972756Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c parser.c -o parser.o 2021-05-16T20:10:24.1315146Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_emit.c -o r_emit.o 2021-05-16T20:10:24.4033350Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_ext.c -o r_ext.o 2021-05-16T20:10:24.5020920Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_parse.c -o r_parse.o 2021-05-16T20:10:24.8901479Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reader.c -o reader.o 2021-05-16T20:10:24.9921769Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c scanner.c -o scanner.o 2021-05-16T20:10:26.2324523Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c writer.c -o writer.o 2021-05-16T20:10:26.2891359Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o yaml.so api.o dumper.o emitter.o implicit.o loader.o parser.o r_emit.o r_ext.o r_parse.o reader.o scanner.o writer.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:10:26.3185198Z installing to /home/runner/work/_temp/Library/00LOCK-yaml/00new/yaml/libs 2021-05-16T20:10:26.3204638Z ** R 2021-05-16T20:10:26.3232767Z ** inst 2021-05-16T20:10:26.3245911Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:10:26.5562653Z ** help 2021-05-16T20:10:26.5763894Z *** installing help indices 2021-05-16T20:10:26.5996943Z ** building package indices 2021-05-16T20:10:26.7817667Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:10:26.9487060Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:10:26.9670724Z ** testing if installed package can be loaded from final location 2021-05-16T20:10:27.1326349Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:10:27.1332852Z * DONE (yaml) 2021-05-16T20:10:27.3812779Z * installing *source* package ‘withr’ ... 2021-05-16T20:10:27.3838713Z ** package ‘withr’ successfully unpacked and MD5 sums checked 2021-05-16T20:10:27.3839856Z ** using staged installation 2021-05-16T20:10:27.3989266Z ** R 2021-05-16T20:10:27.4072370Z ** inst 2021-05-16T20:10:27.4082421Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:10:27.9924976Z ** help 2021-05-16T20:10:28.0666997Z *** installing help indices 2021-05-16T20:10:28.1182848Z *** copying figures 2021-05-16T20:10:28.1185582Z ** building package indices 2021-05-16T20:10:28.3353765Z ** installing vignettes 2021-05-16T20:10:28.3413285Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:10:28.5077265Z ** testing if installed package can be loaded from final location 2021-05-16T20:10:28.6799614Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:10:28.6808744Z * DONE (withr) 2021-05-16T20:10:28.8997729Z * installing *source* package ‘whisker’ ... 2021-05-16T20:10:28.9013526Z ** package ‘whisker’ successfully unpacked and MD5 sums checked 2021-05-16T20:10:28.9016419Z ** using staged installation 2021-05-16T20:10:28.9107992Z ** R 2021-05-16T20:10:28.9146584Z ** inst 2021-05-16T20:10:28.9163914Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:10:29.2962103Z ** help 2021-05-16T20:10:29.3172411Z *** installing help indices 2021-05-16T20:10:29.3393171Z ** building package indices 2021-05-16T20:10:29.5260035Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:10:29.6900554Z ** testing if installed package can be loaded from final location 2021-05-16T20:10:29.8547166Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:10:29.8556135Z * DONE (whisker) 2021-05-16T20:10:30.0593556Z * installing *source* package ‘rappdirs’ ... 2021-05-16T20:10:30.0604303Z ** package ‘rappdirs’ successfully unpacked and MD5 sums checked 2021-05-16T20:10:30.0605511Z ** using staged installation 2021-05-16T20:10:30.0826219Z ** libs 2021-05-16T20:10:30.0873580Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:10:30.1313419Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c win-path.c -o win-path.o 2021-05-16T20:10:30.1754041Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rappdirs.so init.o win-path.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:10:30.1897213Z installing to /home/runner/work/_temp/Library/00LOCK-rappdirs/00new/rappdirs/libs 2021-05-16T20:10:30.1909906Z ** R 2021-05-16T20:10:30.1951128Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:10:30.4751154Z ** help 2021-05-16T20:10:30.4983726Z *** installing help indices 2021-05-16T20:10:30.5187308Z ** building package indices 2021-05-16T20:10:30.7058008Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:10:30.8713457Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:10:30.8888178Z ** testing if installed package can be loaded from final location 2021-05-16T20:10:31.0540757Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:10:31.0547335Z * DONE (rappdirs) 2021-05-16T20:10:31.4972140Z * installing *source* package ‘fs’ ... 2021-05-16T20:10:31.5099576Z ** package ‘fs’ successfully unpacked and MD5 sums checked 2021-05-16T20:10:31.5100788Z ** using staged installation 2021-05-16T20:10:31.5248874Z ** libs 2021-05-16T20:10:31.5310481Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c id.cc -o id.o 2021-05-16T20:10:32.1098303Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c file.cc -o file.o 2021-05-16T20:10:32.5027186Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c path.cc -o path.o 2021-05-16T20:10:32.8692674Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c fs.cc -o fs.o 2021-05-16T20:10:32.9454908Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c link.cc -o link.o 2021-05-16T20:10:33.2282241Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c utils.cc -o utils.o 2021-05-16T20:10:33.5133766Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c init.cc -o init.o 2021-05-16T20:10:33.5967984Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c dir.cc -o dir.o 2021-05-16T20:10:33.9997714Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c getmode.cc -o getmode.o 2021-05-16T20:10:34.2679511Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c error.cc -o error.o 2021-05-16T20:10:34.3623761Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c unix/getmode.cc -o unix/getmode.o 2021-05-16T20:10:34.6517230Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/setmode.c -o bsd/setmode.o 2021-05-16T20:10:34.7730355Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/strmode.c -o bsd/strmode.o 2021-05-16T20:10:34.8124120Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/reallocarray.c -o bsd/reallocarray.o 2021-05-16T20:10:34.8413929Z (cd libuv-1.38.1 \ 2021-05-16T20:10:34.8415419Z && CC="gcc" CFLAGS="-g -O2 -I/usr/local/include -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" LDFLAGS="-L/usr/local/lib" ./configure --quiet) 2021-05-16T20:10:39.3500193Z make --directory=libuv-1.38.1 \ 2021-05-16T20:10:39.3501061Z HAVE_DTRACE=0 2021-05-16T20:10:39.3592635Z make[1]: Entering directory '/tmp/RtmpidU0TJ/R.INSTALL797b1a4b6724/fs/src/libuv-1.38.1' 2021-05-16T20:10:39.3682432Z CC src/libuv_la-fs-poll.lo 2021-05-16T20:10:39.9495134Z CC src/libuv_la-idna.lo 2021-05-16T20:10:40.5469782Z CC src/libuv_la-inet.lo 2021-05-16T20:10:41.1600215Z CC src/libuv_la-random.lo 2021-05-16T20:10:41.6566192Z CC src/libuv_la-strscpy.lo 2021-05-16T20:10:42.1186955Z CC src/libuv_la-threadpool.lo 2021-05-16T20:10:42.7440017Z CC src/libuv_la-timer.lo 2021-05-16T20:10:43.3295362Z CC src/libuv_la-uv-data-getter-setters.lo 2021-05-16T20:10:43.8296547Z CC src/libuv_la-uv-common.lo 2021-05-16T20:10:44.8705105Z CC src/libuv_la-version.lo 2021-05-16T20:10:45.3294582Z CC src/unix/libuv_la-async.lo 2021-05-16T20:10:45.9106942Z CC src/unix/libuv_la-core.lo 2021-05-16T20:10:47.0286610Z CC src/unix/libuv_la-dl.lo 2021-05-16T20:10:47.5216805Z CC src/unix/libuv_la-fs.lo 2021-05-16T20:10:48.9681347Z CC src/unix/libuv_la-getaddrinfo.lo 2021-05-16T20:10:49.5367463Z CC src/unix/libuv_la-getnameinfo.lo 2021-05-16T20:10:50.0392664Z CC src/unix/libuv_la-loop-watcher.lo 2021-05-16T20:10:50.6146352Z CC src/unix/libuv_la-loop.lo 2021-05-16T20:10:51.1665218Z CC src/unix/libuv_la-pipe.lo 2021-05-16T20:10:51.7755401Z CC src/unix/libuv_la-poll.lo 2021-05-16T20:10:52.3159094Z CC src/unix/libuv_la-process.lo 2021-05-16T20:10:53.0452132Z CC src/unix/libuv_la-random-devurandom.lo 2021-05-16T20:10:53.5611036Z CC src/unix/libuv_la-signal.lo 2021-05-16T20:10:54.4235536Z CC src/unix/libuv_la-stream.lo 2021-05-16T20:10:55.4277359Z CC src/unix/libuv_la-tcp.lo 2021-05-16T20:10:56.0597865Z CC src/unix/libuv_la-thread.lo 2021-05-16T20:10:56.7474388Z CC src/unix/libuv_la-tty.lo 2021-05-16T20:10:57.3331275Z CC src/unix/libuv_la-udp.lo 2021-05-16T20:10:58.3218726Z CC src/unix/libuv_la-linux-core.lo 2021-05-16T20:10:59.3413790Z CC src/unix/libuv_la-linux-inotify.lo 2021-05-16T20:11:00.1308377Z CC src/unix/libuv_la-linux-syscalls.lo 2021-05-16T20:11:00.5720535Z CC src/unix/libuv_la-procfs-exepath.lo 2021-05-16T20:11:01.0695803Z CC src/unix/libuv_la-proctitle.lo 2021-05-16T20:11:01.5978570Z CC src/unix/libuv_la-random-getrandom.lo 2021-05-16T20:11:02.0770785Z CC src/unix/libuv_la-random-sysctl-linux.lo 2021-05-16T20:11:02.5767819Z CCLD libuv.la 2021-05-16T20:11:02.7728771Z ar: `u' modifier ignored since `D' is the default (see `U') 2021-05-16T20:11:02.8143827Z make[1]: Leaving directory '/tmp/RtmpidU0TJ/R.INSTALL797b1a4b6724/fs/src/libuv-1.38.1' 2021-05-16T20:11:02.8161798Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fs.so id.o file.o path.o fs.o link.o utils.o init.o dir.o getmode.o error.o unix/getmode.o bsd/setmode.o bsd/strmode.o bsd/reallocarray.o ./libuv-1.38.1/.libs/libuv.a -pthread -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:11:02.8976071Z installing to /home/runner/work/_temp/Library/00LOCK-fs/00new/fs/libs 2021-05-16T20:11:02.9005556Z ** R 2021-05-16T20:11:02.9101794Z ** inst 2021-05-16T20:11:02.9112777Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:11:03.8396666Z ** help 2021-05-16T20:11:03.9067076Z *** installing help indices 2021-05-16T20:11:03.9546306Z ** building package indices 2021-05-16T20:11:04.1706777Z ** installing vignettes 2021-05-16T20:11:04.1811515Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:11:04.3982770Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:11:04.4165227Z ** testing if installed package can be loaded from final location 2021-05-16T20:11:04.6386232Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:11:04.6397311Z * DONE (fs) 2021-05-16T20:11:04.8589832Z * installing *source* package ‘clipr’ ... 2021-05-16T20:11:04.8601941Z ** package ‘clipr’ successfully unpacked and MD5 sums checked 2021-05-16T20:11:04.8603134Z ** using staged installation 2021-05-16T20:11:04.8805075Z ** R 2021-05-16T20:11:04.8843944Z ** inst 2021-05-16T20:11:04.8853222Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:11:05.1893602Z ** help 2021-05-16T20:11:05.2096214Z *** installing help indices 2021-05-16T20:11:05.2296880Z ** building package indices 2021-05-16T20:11:05.4173329Z ** installing vignettes 2021-05-16T20:11:05.4174237Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:11:05.5873592Z ** testing if installed package can be loaded from final location 2021-05-16T20:11:05.7529590Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:11:05.7536693Z * DONE (clipr) 2021-05-16T20:11:06.4509247Z * installing *source* package ‘git2r’ ... 2021-05-16T20:11:06.4742526Z ** package ‘git2r’ successfully unpacked and MD5 sums checked 2021-05-16T20:11:06.4743861Z ** using staged installation 2021-05-16T20:11:06.6428066Z checking build system type... x86_64-unknown-linux-gnu 2021-05-16T20:11:06.6429695Z checking host system type... x86_64-unknown-linux-gnu 2021-05-16T20:11:06.6436150Z checking for gcc... gcc 2021-05-16T20:11:06.6997326Z checking whether the C compiler works... yes 2021-05-16T20:11:06.6998786Z checking for C compiler default output file name... a.out 2021-05-16T20:11:06.7334540Z checking for suffix of executables... 2021-05-16T20:11:06.7723563Z checking whether we are cross compiling... no 2021-05-16T20:11:06.7931981Z checking for suffix of object files... o 2021-05-16T20:11:06.8120282Z checking whether we are using the GNU C compiler... yes 2021-05-16T20:11:06.8310529Z checking whether gcc accepts -g... yes 2021-05-16T20:11:06.8645444Z checking for gcc option to accept ISO C89... none needed 2021-05-16T20:11:06.8652842Z checking for pkg-config... /usr/bin/pkg-config 2021-05-16T20:11:06.8666621Z checking pkg-config is at least version 0.9.0... yes 2021-05-16T20:11:06.8808761Z Found pkg-config cflags and libs! 2021-05-16T20:11:06.9696873Z checking whether the libgit2 version will work in git2r... yes 2021-05-16T20:11:07.0856495Z checking whether the libgit2 function git_buf_dispose is available... yes 2021-05-16T20:11:07.2014092Z checking whether the libgit2 constant GIT_OBJECT_ANY is available... yes 2021-05-16T20:11:07.3157678Z checking whether the libgit2 function git_error_last is available... yes 2021-05-16T20:11:07.4126424Z checking whether the libgit2 function git_oid_is_zero is available... no 2021-05-16T20:11:07.4128165Z ----- Results of the git2r package configure ----- 2021-05-16T20:11:07.4128725Z 2021-05-16T20:11:07.4129818Z PKG_CFLAGS: -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR 2021-05-16T20:11:07.4130760Z PKG_LIBS: -lgit2 2021-05-16T20:11:07.4131204Z 2021-05-16T20:11:07.4132004Z -------------------------------------------------- 2021-05-16T20:11:07.4312480Z configure: creating ./config.status 2021-05-16T20:11:07.5017746Z config.status: creating src/Makevars 2021-05-16T20:11:07.5539577Z ** libs 2021-05-16T20:11:07.5596948Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r.c -o git2r.o 2021-05-16T20:11:07.6229481Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_S3.c -o git2r_S3.o 2021-05-16T20:11:07.6702617Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_arg.c -o git2r_arg.o 2021-05-16T20:11:07.8167633Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_blame.c -o git2r_blame.o 2021-05-16T20:11:07.9021188Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_blob.c -o git2r_blob.o 2021-05-16T20:11:08.0170086Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_branch.c -o git2r_branch.o 2021-05-16T20:11:08.2323218Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_checkout.c -o git2r_checkout.o 2021-05-16T20:11:08.3189067Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_clone.c -o git2r_clone.o 2021-05-16T20:11:08.4042314Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_commit.c -o git2r_commit.o 2021-05-16T20:11:08.5467006Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_config.c -o git2r_config.o 2021-05-16T20:11:08.6953458Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_cred.c -o git2r_cred.o 2021-05-16T20:11:08.7805707Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_diff.c -o git2r_diff.o 2021-05-16T20:11:09.0146543Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_error.c -o git2r_error.o 2021-05-16T20:11:09.0759775Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_graph.c -o git2r_graph.o 2021-05-16T20:11:09.1565854Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_index.c -o git2r_index.o 2021-05-16T20:11:09.2376895Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_libgit2.c -o git2r_libgit2.o 2021-05-16T20:11:09.3123112Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_merge.c -o git2r_merge.o 2021-05-16T20:11:09.4764692Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_note.c -o git2r_note.o 2021-05-16T20:11:09.5966037Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_object.c -o git2r_object.o 2021-05-16T20:11:09.6726090Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_odb.c -o git2r_odb.o 2021-05-16T20:11:09.8223795Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_oid.c -o git2r_oid.o 2021-05-16T20:11:09.8820371Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_push.c -o git2r_push.o 2021-05-16T20:11:09.9580784Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reference.c -o git2r_reference.o 2021-05-16T20:11:10.0462400Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reflog.c -o git2r_reflog.o 2021-05-16T20:11:10.1261540Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_remote.c -o git2r_remote.o 2021-05-16T20:11:10.2906504Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_repository.c -o git2r_repository.o 2021-05-16T20:11:10.4361590Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reset.c -o git2r_reset.o 2021-05-16T20:11:10.5107578Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_revparse.c -o git2r_revparse.o 2021-05-16T20:11:10.5840782Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_revwalk.c -o git2r_revwalk.o 2021-05-16T20:11:10.7483485Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_signature.c -o git2r_signature.o 2021-05-16T20:11:10.8219362Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_stash.c -o git2r_stash.o 2021-05-16T20:11:10.9306426Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_status.c -o git2r_status.o 2021-05-16T20:11:11.0784196Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_tag.c -o git2r_tag.o 2021-05-16T20:11:11.1958476Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_transfer.c -o git2r_transfer.o 2021-05-16T20:11:11.2574258Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_tree.c -o git2r_tree.o 2021-05-16T20:11:11.3642321Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o git2r.so git2r.o git2r_S3.o git2r_arg.o git2r_blame.o git2r_blob.o git2r_branch.o git2r_checkout.o git2r_clone.o git2r_commit.o git2r_config.o git2r_cred.o git2r_diff.o git2r_error.o git2r_graph.o git2r_index.o git2r_libgit2.o git2r_merge.o git2r_note.o git2r_object.o git2r_odb.o git2r_oid.o git2r_push.o git2r_reference.o git2r_reflog.o git2r_remote.o git2r_repository.o git2r_reset.o git2r_revparse.o git2r_revwalk.o git2r_signature.o git2r_stash.o git2r_status.o git2r_tag.o git2r_transfer.o git2r_tree.o -lgit2 -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:11:11.4077402Z installing to /home/runner/work/_temp/Library/00LOCK-git2r/00new/git2r/libs 2021-05-16T20:11:11.4078816Z ** R 2021-05-16T20:11:11.4234462Z ** inst 2021-05-16T20:11:11.4243617Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:11:12.3093140Z ** help 2021-05-16T20:11:12.5415533Z *** installing help indices 2021-05-16T20:11:12.7214579Z ** building package indices 2021-05-16T20:11:13.0386949Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:11:13.2178750Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:11:13.2354565Z ** testing if installed package can be loaded from final location 2021-05-16T20:11:13.4246599Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:11:13.4258595Z * DONE (git2r) 2021-05-16T20:11:13.6325416Z * installing *source* package ‘askpass’ ... 2021-05-16T20:11:13.6333985Z ** package ‘askpass’ successfully unpacked and MD5 sums checked 2021-05-16T20:11:13.6335068Z ** using staged installation 2021-05-16T20:11:13.6464864Z ** libs 2021-05-16T20:11:13.6509452Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c askpass.c -o askpass.o 2021-05-16T20:11:13.6998444Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o askpass.so askpass.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:11:13.7204541Z installing to /home/runner/work/_temp/Library/00LOCK-askpass/00new/askpass/libs 2021-05-16T20:11:13.7218996Z ** R 2021-05-16T20:11:13.7247547Z ** inst 2021-05-16T20:11:13.7255451Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:11:13.9684108Z ** help 2021-05-16T20:11:13.9852467Z *** installing help indices 2021-05-16T20:11:13.9990442Z ** building package indices 2021-05-16T20:11:14.1772836Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:11:14.3462622Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:11:14.3645139Z ** testing if installed package can be loaded from final location 2021-05-16T20:11:14.5268858Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:11:14.5274401Z * DONE (askpass) 2021-05-16T20:11:14.8451502Z * installing *source* package ‘cli’ ... 2021-05-16T20:11:14.8507344Z ** package ‘cli’ successfully unpacked and MD5 sums checked 2021-05-16T20:11:14.8508380Z ** using staged installation 2021-05-16T20:11:14.8682320Z ** R 2021-05-16T20:11:14.8939670Z ** inst 2021-05-16T20:11:14.8952902Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:11:17.1688188Z ** help 2021-05-16T20:11:17.3492541Z *** installing help indices 2021-05-16T20:11:17.4672904Z *** copying figures 2021-05-16T20:11:17.4674116Z ** building package indices 2021-05-16T20:11:17.7568835Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:11:17.9636175Z ** testing if installed package can be loaded from final location 2021-05-16T20:11:18.2169592Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:11:18.2195961Z * DONE (cli) 2021-05-16T20:11:18.5208161Z * installing *source* package ‘purrr’ ... 2021-05-16T20:11:18.5256502Z ** package ‘purrr’ successfully unpacked and MD5 sums checked 2021-05-16T20:11:18.5258947Z ** using staged installation 2021-05-16T20:11:18.5398816Z ** libs 2021-05-16T20:11:18.5446846Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c backports.c -o backports.o 2021-05-16T20:11:18.5816751Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-05-16T20:11:18.6663482Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c conditions.c -o conditions.o 2021-05-16T20:11:18.7478746Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c flatten.c -o flatten.o 2021-05-16T20:11:18.8501403Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:11:18.8917586Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c map.c -o map.o 2021-05-16T20:11:19.0034473Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pluck.c -o pluck.o 2021-05-16T20:11:19.1278657Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c transpose.c -o transpose.o 2021-05-16T20:11:19.2107811Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T20:11:19.2614550Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o purrr.so backports.o coerce.o conditions.o flatten.o init.o map.o pluck.o transpose.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:11:19.2857102Z installing to /home/runner/work/_temp/Library/00LOCK-purrr/00new/purrr/libs 2021-05-16T20:11:19.2871140Z ** R 2021-05-16T20:11:19.3033864Z ** inst 2021-05-16T20:11:19.3043596Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:11:20.4356846Z ** help 2021-05-16T20:11:20.5957607Z *** installing help indices 2021-05-16T20:11:20.6860172Z *** copying figures 2021-05-16T20:11:20.6865375Z ** building package indices 2021-05-16T20:11:20.9450774Z ** installing vignettes 2021-05-16T20:11:20.9530728Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:11:21.1424080Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:11:21.1597457Z ** testing if installed package can be loaded from final location 2021-05-16T20:11:21.3688432Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:11:21.3703735Z * DONE (purrr) 2021-05-16T20:11:21.6185203Z * installing *source* package ‘lifecycle’ ... 2021-05-16T20:11:21.6210830Z ** package ‘lifecycle’ successfully unpacked and MD5 sums checked 2021-05-16T20:11:21.6212033Z ** using staged installation 2021-05-16T20:11:21.6352579Z ** R 2021-05-16T20:11:21.6393210Z ** inst 2021-05-16T20:11:21.6403914Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:11:22.0231959Z ** help 2021-05-16T20:11:22.0540116Z *** installing help indices 2021-05-16T20:11:22.0773933Z *** copying figures 2021-05-16T20:11:22.0778657Z ** building package indices 2021-05-16T20:11:22.2693322Z ** installing vignettes 2021-05-16T20:11:22.2699986Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:11:22.4505465Z ** testing if installed package can be loaded from final location 2021-05-16T20:11:22.6342225Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:11:22.6350567Z * DONE (lifecycle) 2021-05-16T20:11:22.8411355Z * installing *source* package ‘cachem’ ... 2021-05-16T20:11:22.8422413Z ** package ‘cachem’ successfully unpacked and MD5 sums checked 2021-05-16T20:11:22.8423465Z ** using staged installation 2021-05-16T20:11:22.8549490Z ** libs 2021-05-16T20:11:22.8598496Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cache.c -o cache.o 2021-05-16T20:11:22.9084832Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:11:22.9519712Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o cachem.so cache.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:11:22.9724595Z installing to /home/runner/work/_temp/Library/00LOCK-cachem/00new/cachem/libs 2021-05-16T20:11:22.9738892Z ** R 2021-05-16T20:11:22.9864171Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:11:23.4984023Z ** help 2021-05-16T20:11:23.5209382Z *** installing help indices 2021-05-16T20:11:23.5400487Z ** building package indices 2021-05-16T20:11:23.7292879Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:11:23.9181272Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:11:23.9352531Z ** testing if installed package can be loaded from final location 2021-05-16T20:11:24.1247326Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:11:24.1254598Z * DONE (cachem) 2021-05-16T20:11:24.5508230Z * installing *source* package ‘openssl’ ... 2021-05-16T20:11:24.5629066Z ** package ‘openssl’ successfully unpacked and MD5 sums checked 2021-05-16T20:11:24.5630288Z ** using staged installation 2021-05-16T20:11:24.5772986Z Found pkg-config cflags and libs! 2021-05-16T20:11:24.6579446Z Using PKG_CFLAGS= 2021-05-16T20:11:25.0485564Z Using PKG_LIBS=-l:libssl.so.1.1 -l:libcrypto.so.1.1 2021-05-16T20:11:25.0642378Z ** libs 2021-05-16T20:11:25.0699353Z rm -f aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o openssl.so bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o 2021-05-16T20:11:25.0725189Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o 2021-05-16T20:11:25.1533379Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T20:11:25.2283506Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bignum.c -o bignum.o 2021-05-16T20:11:25.3260166Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cert.c -o cert.o 2021-05-16T20:11:25.4793627Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c compatibility.c -o compatibility.o 2021-05-16T20:11:25.5413332Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffie.c -o diffie.o 2021-05-16T20:11:25.6312101Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c envelope.c -o envelope.o 2021-05-16T20:11:25.7442155Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error.c -o error.o 2021-05-16T20:11:25.7962332Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c hash.c -o hash.o 2021-05-16T20:11:25.8887331Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c info.c -o info.o 2021-05-16T20:11:25.9509195Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keygen.c -o keygen.o 2021-05-16T20:11:26.0486052Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keys.c -o keys.o 2021-05-16T20:11:26.1731990Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c onload.c -o onload.o 2021-05-16T20:11:26.2581208Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c openssh.c -o openssh.o 2021-05-16T20:11:26.4382828Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c password.c -o password.o 2021-05-16T20:11:26.4897749Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pbkdf.c -o pbkdf.o 2021-05-16T20:11:26.5305381Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pem.c -o pem.o 2021-05-16T20:11:26.6544358Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs12.c -o pkcs12.o 2021-05-16T20:11:26.7904708Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs7.c -o pkcs7.o 2021-05-16T20:11:26.9118918Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rand.c -o rand.o 2021-05-16T20:11:26.9555754Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rsa.c -o rsa.o 2021-05-16T20:11:27.0500981Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signing.c -o signing.o 2021-05-16T20:11:27.1668178Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c ssl.c -o ssl.o 2021-05-16T20:11:27.3062712Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stream.c -o stream.o 2021-05-16T20:11:27.4196289Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write.c -o write.o 2021-05-16T20:11:27.5439063Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c x25519.c -o x25519.o 2021-05-16T20:11:27.6641232Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bcrypt/bcrypt_pbkdf.c -o bcrypt/bcrypt_pbkdf.o 2021-05-16T20:11:27.7301435Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bcrypt/blowfish.c -o bcrypt/blowfish.o 2021-05-16T20:11:27.9029126Z ar rcs bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o 2021-05-16T20:11:27.9082751Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o openssl.so aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o -Lbcrypt -lstatbcrypt -l:libssl.so.1.1 -l:libcrypto.so.1.1 -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:11:27.9621650Z installing to /home/runner/work/_temp/Library/00LOCK-openssl/00new/openssl/libs 2021-05-16T20:11:27.9638999Z ** R 2021-05-16T20:11:27.9741515Z ** inst 2021-05-16T20:11:27.9789459Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:11:28.8398875Z ** help 2021-05-16T20:11:28.8921167Z *** installing help indices 2021-05-16T20:11:28.9278614Z ** building package indices 2021-05-16T20:11:29.1354310Z ** installing vignettes 2021-05-16T20:11:29.1503045Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:11:29.3279181Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:11:29.3455364Z ** testing if installed package can be loaded from final location 2021-05-16T20:11:29.5352911Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:11:29.5366160Z * DONE (openssl) 2021-05-16T20:11:29.7450380Z * installing *source* package ‘memoise’ ... 2021-05-16T20:11:29.7461397Z ** package ‘memoise’ successfully unpacked and MD5 sums checked 2021-05-16T20:11:29.7462655Z ** using staged installation 2021-05-16T20:11:29.7609075Z ** R 2021-05-16T20:11:29.7703425Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:11:30.1502097Z ** help 2021-05-16T20:11:30.1752789Z *** installing help indices 2021-05-16T20:11:30.1987802Z ** building package indices 2021-05-16T20:11:30.3905763Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:11:30.5762036Z ** testing if installed package can be loaded from final location 2021-05-16T20:11:30.7641508Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:11:30.7648255Z * DONE (memoise) 2021-05-16T20:11:31.0608025Z * installing *source* package ‘httr’ ... 2021-05-16T20:11:31.0654271Z ** package ‘httr’ successfully unpacked and MD5 sums checked 2021-05-16T20:11:31.0655440Z ** using staged installation 2021-05-16T20:11:31.0800641Z ** R 2021-05-16T20:11:31.0962025Z ** demo 2021-05-16T20:11:31.0972735Z ** inst 2021-05-16T20:11:31.0985548Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:11:33.3664253Z ** help 2021-05-16T20:11:33.5161541Z *** installing help indices 2021-05-16T20:11:33.6118124Z ** building package indices 2021-05-16T20:11:33.8813286Z ** installing vignettes 2021-05-16T20:11:33.8859242Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:11:34.0556086Z ** testing if installed package can be loaded from final location 2021-05-16T20:11:34.2730009Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:11:34.2756674Z * DONE (httr) 2021-05-16T20:11:34.4999809Z * installing *source* package ‘credentials’ ... 2021-05-16T20:11:34.5017811Z ** package ‘credentials’ successfully unpacked and MD5 sums checked 2021-05-16T20:11:34.5019009Z ** using staged installation 2021-05-16T20:11:34.5149235Z ** R 2021-05-16T20:11:34.5193143Z ** inst 2021-05-16T20:11:34.5205173Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:11:34.9239945Z ** help 2021-05-16T20:11:34.9428464Z *** installing help indices 2021-05-16T20:11:34.9619051Z ** building package indices 2021-05-16T20:11:35.1426191Z ** installing vignettes 2021-05-16T20:11:35.1480509Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:11:35.4481087Z ** testing if installed package can be loaded from final location 2021-05-16T20:11:35.6720979Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:11:35.6727984Z * DONE (credentials) 2021-05-16T20:11:35.8989227Z * installing *source* package ‘gh’ ... 2021-05-16T20:11:35.9006073Z ** package ‘gh’ successfully unpacked and MD5 sums checked 2021-05-16T20:11:35.9007268Z ** using staged installation 2021-05-16T20:11:35.9148102Z ** R 2021-05-16T20:11:35.9226733Z ** inst 2021-05-16T20:11:35.9235531Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:11:36.8814589Z ** help 2021-05-16T20:11:36.9091533Z *** installing help indices 2021-05-16T20:11:36.9378799Z ** building package indices 2021-05-16T20:11:37.1293357Z ** installing vignettes 2021-05-16T20:11:37.1331946Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:11:37.3644593Z ** testing if installed package can be loaded from final location 2021-05-16T20:11:37.6072977Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:11:37.6085335Z * DONE (gh) 2021-05-16T20:11:37.8534913Z * installing *source* package ‘gert’ ... 2021-05-16T20:11:37.8559574Z ** package ‘gert’ successfully unpacked and MD5 sums checked 2021-05-16T20:11:37.8560779Z ** using staged installation 2021-05-16T20:11:37.8654410Z Found pkg-config cflags and libs! 2021-05-16T20:11:37.9454409Z Using PKG_CFLAGS= 2021-05-16T20:11:37.9455873Z Using PKG_LIBS=-lgit2 2021-05-16T20:11:37.9816790Z Configuration OK! 2021-05-16T20:11:37.9966956Z ** libs 2021-05-16T20:11:38.0015813Z rm -f gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o 2021-05-16T20:11:38.0041994Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c branch.c -o branch.o 2021-05-16T20:11:38.2056442Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c clone.c -o clone.o 2021-05-16T20:11:38.4226898Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c commit.c -o commit.o 2021-05-16T20:11:38.6350397Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c config.c -o config.o 2021-05-16T20:11:38.7177123Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c conflicts.c -o conflicts.o 2021-05-16T20:11:38.7879060Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c files.c -o files.o 2021-05-16T20:11:38.9260612Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:11:38.9846292Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c merge.c -o merge.o 2021-05-16T20:11:39.0813266Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rebase.c -o rebase.o 2021-05-16T20:11:39.1857375Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c stash.c -o stash.o 2021-05-16T20:11:39.2650231Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c submodules.c -o submodules.o 2021-05-16T20:11:39.3704616Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c tag.c -o tag.o 2021-05-16T20:11:39.4481882Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T20:11:39.5636963Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-16T20:11:39.6369350Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o -lgit2 -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:11:39.6659891Z installing to /home/runner/work/_temp/Library/00LOCK-gert/00new/gert/libs 2021-05-16T20:11:39.6676278Z ** R 2021-05-16T20:11:39.6759361Z ** inst 2021-05-16T20:11:39.6768383Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:11:40.3476053Z ** help 2021-05-16T20:11:40.4055582Z *** installing help indices 2021-05-16T20:11:40.4470454Z ** building package indices 2021-05-16T20:11:40.6573130Z ** installing vignettes 2021-05-16T20:11:40.6637575Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:11:40.8740506Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:11:40.8914313Z ** testing if installed package can be loaded from final location 2021-05-16T20:11:41.1061971Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:11:41.1077657Z * DONE (gert) 2021-05-16T20:11:41.4802684Z * installing *source* package ‘usethis’ ... 2021-05-16T20:11:41.4878210Z ** package ‘usethis’ successfully unpacked and MD5 sums checked 2021-05-16T20:11:41.4879260Z ** using staged installation 2021-05-16T20:11:41.5103494Z ** R 2021-05-16T20:11:41.5422140Z ** inst 2021-05-16T20:11:41.5453564Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:11:43.9796566Z ** help 2021-05-16T20:11:44.1666053Z *** installing help indices 2021-05-16T20:11:44.2870298Z *** copying figures 2021-05-16T20:11:44.2876221Z ** building package indices 2021-05-16T20:11:44.5764640Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:11:44.8449240Z ** testing if installed package can be loaded from final location 2021-05-16T20:11:45.1586778Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:11:45.1618261Z * DONE (usethis) 2021-05-16T20:11:45.1727840Z 2021-05-16T20:11:45.1728638Z The downloaded source packages are in 2021-05-16T20:11:45.1729971Z ‘/tmp/RtmpyKXx5D/downloaded_packages’ 2021-05-16T20:11:45.1730634Z Running `R CMD build`... 2021-05-16T20:11:47.2160607Z * checking for file ‘/tmp/RtmpyKXx5D/remotes72cf3dc6d494/ropensci-tic-3b4dfb8/DESCRIPTION’ ... OK 2021-05-16T20:11:47.2162242Z * preparing ‘tic’: 2021-05-16T20:11:47.2163478Z * checking DESCRIPTION meta-information ... OK 2021-05-16T20:11:47.2164498Z * installing the package to process help pages 2021-05-16T20:11:47.2165812Z * checking for LF line-endings in source and make files and shell scripts 2021-05-16T20:11:47.2166875Z * checking for empty or unneeded directories 2021-05-16T20:11:47.2168014Z Removed empty directory ‘tic/.circleci’ 2021-05-16T20:11:47.2169108Z Removed empty directory ‘tic/pkgdown’ 2021-05-16T20:11:47.2170089Z * building ‘tic_0.10.0.tar.gz’ 2021-05-16T20:11:47.2172533Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:11:47.2173656Z (as ‘lib’ is unspecified) 2021-05-16T20:11:47.5343501Z * installing *source* package ‘tic’ ... 2021-05-16T20:11:47.5366009Z ** using staged installation 2021-05-16T20:11:47.5588841Z ** R 2021-05-16T20:11:47.5768654Z ** inst 2021-05-16T20:11:47.5799791Z ** preparing package for lazy loading 2021-05-16T20:11:47.9187633Z ** help 2021-05-16T20:11:48.0664149Z *** installing help indices 2021-05-16T20:11:48.1567380Z *** copying figures 2021-05-16T20:11:48.1571381Z ** building package indices 2021-05-16T20:11:48.4137167Z ** installing vignettes 2021-05-16T20:11:48.4187718Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:11:48.6621745Z ** testing if installed package can be loaded from final location 2021-05-16T20:11:48.9526725Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:11:48.9558248Z * DONE (tic) 2021-05-16T20:11:48.9687372Z Using github PAT from envvar GITHUB_PAT 2021-05-16T20:11:49.1774084Z Downloading GitHub repo muschellij2/ghtravis@HEAD 2021-05-16T20:11:50.0965924Z desc (1.3.0 -> 7be86f2f7...) [GitHub] 2021-05-16T20:11:50.0967471Z utf8 (NA -> 1.2.1 ) [CRAN] 2021-05-16T20:11:50.0970143Z Installing 37 packages: utf8, vctrs, pkgconfig, pillar, tibble, rematch2, fansi, diffobj, waldo, ps, processx, praise, pkgload, evaluate, ellipsis, digest, callr, brio, xml2, xfun, markdown, highr, stringr, stringi, Rcpp, knitr, commonmark, brew, xopen, sessioninfo, prettyunits, pkgbuild, testthat, rversions, roxygen2, rcmdcheck, devtools 2021-05-16T20:11:50.0972774Z vctrs (NA -> 0.3.8 ) [CRAN] 2021-05-16T20:11:50.0973679Z pkgconfig (NA -> 2.0.3 ) [CRAN] 2021-05-16T20:11:50.0974568Z pillar (NA -> 1.6.1 ) [CRAN] 2021-05-16T20:11:50.0976395Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:11:50.0977246Z tibble (NA -> 3.1.2 ) [CRAN] 2021-05-16T20:11:50.0978764Z (as ‘lib’ is unspecified) 2021-05-16T20:11:50.0979512Z rematch2 (NA -> 2.1.2 ) [CRAN] 2021-05-16T20:11:50.0980497Z fansi (NA -> 0.4.2 ) [CRAN] 2021-05-16T20:11:50.0981346Z diffobj (NA -> 0.3.4 ) [CRAN] 2021-05-16T20:11:50.0982185Z waldo (NA -> 0.2.5 ) [CRAN] 2021-05-16T20:11:50.0983006Z ps (NA -> 1.6.0 ) [CRAN] 2021-05-16T20:11:50.0983830Z processx (NA -> 3.5.2 ) [CRAN] 2021-05-16T20:11:50.0984689Z praise (NA -> 1.0.0 ) [CRAN] 2021-05-16T20:11:50.0985880Z pkgload (NA -> 1.2.1 ) [CRAN] 2021-05-16T20:11:50.0986731Z evaluate (NA -> 0.14 ) [CRAN] 2021-05-16T20:11:50.0987607Z ellipsis (NA -> 0.3.2 ) [CRAN] 2021-05-16T20:11:50.0988445Z digest (NA -> 0.6.27 ) [CRAN] 2021-05-16T20:11:50.0989280Z callr (NA -> 3.7.0 ) [CRAN] 2021-05-16T20:11:50.0990106Z brio (NA -> 1.1.2 ) [CRAN] 2021-05-16T20:11:50.0990903Z xml2 (NA -> 1.3.2 ) [CRAN] 2021-05-16T20:11:50.0991735Z xfun (NA -> 0.23 ) [CRAN] 2021-05-16T20:11:50.0992559Z markdown (NA -> 1.1 ) [CRAN] 2021-05-16T20:11:50.0993406Z highr (NA -> 0.9 ) [CRAN] 2021-05-16T20:11:50.0994239Z stringr (NA -> 1.4.0 ) [CRAN] 2021-05-16T20:11:50.0995114Z stringi (NA -> 1.6.1 ) [CRAN] 2021-05-16T20:11:50.0995949Z Rcpp (NA -> 1.0.6 ) [CRAN] 2021-05-16T20:11:50.0996754Z knitr (NA -> 1.33 ) [CRAN] 2021-05-16T20:11:50.0997619Z commonmark (NA -> 1.7 ) [CRAN] 2021-05-16T20:11:50.0998476Z brew (NA -> 1.0-6 ) [CRAN] 2021-05-16T20:11:50.0999286Z xopen (NA -> 1.0.0 ) [CRAN] 2021-05-16T20:11:50.1000155Z sessioninfo (NA -> 1.1.1 ) [CRAN] 2021-05-16T20:11:50.1001036Z prettyunits (NA -> 1.1.1 ) [CRAN] 2021-05-16T20:11:50.1001914Z pkgbuild (NA -> 1.2.0 ) [CRAN] 2021-05-16T20:11:50.1002776Z testthat (NA -> 3.0.2 ) [CRAN] 2021-05-16T20:11:50.1003774Z rversions (NA -> 2.0.2 ) [CRAN] 2021-05-16T20:11:50.1004667Z roxygen2 (NA -> 7.1.1 ) [CRAN] 2021-05-16T20:11:50.1005533Z rcmdcheck (NA -> 1.3.3 ) [CRAN] 2021-05-16T20:11:50.1006402Z devtools (NA -> 2.4.1 ) [CRAN] 2021-05-16T20:12:03.9986157Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/utf8_1.2.1.tar.gz' 2021-05-16T20:12:05.5756709Z Content type 'binary/octet-stream' length 237667 bytes (232 KB) 2021-05-16T20:12:05.5927161Z ================================================== 2021-05-16T20:12:05.5928074Z downloaded 232 KB 2021-05-16T20:12:05.5928608Z 2021-05-16T20:12:05.5959598Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/vctrs_0.3.8.tar.gz' 2021-05-16T20:12:08.3325467Z Content type 'binary/octet-stream' length 784938 bytes (766 KB) 2021-05-16T20:12:08.3598264Z ================================================== 2021-05-16T20:12:08.3599287Z downloaded 766 KB 2021-05-16T20:12:08.3599813Z 2021-05-16T20:12:08.3633601Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgconfig_2.0.3.tar.gz' 2021-05-16T20:12:08.6366328Z Content type 'application/x-tar' length 6108 bytes 2021-05-16T20:12:08.6367805Z ================================================== 2021-05-16T20:12:08.6368517Z downloaded 6108 bytes 2021-05-16T20:12:08.6369042Z 2021-05-16T20:12:08.6399182Z trying URL 'https://cloud.r-project.org/src/contrib/pillar_1.6.1.tar.gz' 2021-05-16T20:12:08.8941871Z Content type 'application/x-gzip' length 1111747 bytes (1.1 MB) 2021-05-16T20:12:08.9263736Z ================================================== 2021-05-16T20:12:08.9264583Z downloaded 1.1 MB 2021-05-16T20:12:08.9265036Z 2021-05-16T20:12:08.9291507Z trying URL 'https://cloud.r-project.org/src/contrib/tibble_3.1.2.tar.gz' 2021-05-16T20:12:08.9643374Z Content type 'application/x-gzip' length 686145 bytes (670 KB) 2021-05-16T20:12:08.9903025Z ================================================== 2021-05-16T20:12:08.9903883Z downloaded 670 KB 2021-05-16T20:12:08.9904438Z 2021-05-16T20:12:08.9925831Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rematch2_2.1.2.tar.gz' 2021-05-16T20:12:09.3141528Z Content type 'binary/octet-stream' length 13441 bytes (13 KB) 2021-05-16T20:12:09.3142540Z ================================================== 2021-05-16T20:12:09.3143357Z downloaded 13 KB 2021-05-16T20:12:09.3143724Z 2021-05-16T20:12:09.3181665Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fansi_0.4.2.tar.gz' 2021-05-16T20:12:11.5622910Z Content type 'binary/octet-stream' length 270970 bytes (264 KB) 2021-05-16T20:12:11.5774340Z ================================================== 2021-05-16T20:12:11.5774848Z downloaded 264 KB 2021-05-16T20:12:11.5775156Z 2021-05-16T20:12:11.5813845Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/diffobj_0.3.4.tar.gz' 2021-05-16T20:12:13.1205551Z Content type 'binary/octet-stream' length 476003 bytes (464 KB) 2021-05-16T20:12:13.1440029Z ================================================== 2021-05-16T20:12:13.1440580Z downloaded 464 KB 2021-05-16T20:12:13.1440849Z 2021-05-16T20:12:13.7681688Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/waldo_0.2.5.tar.gz' 2021-05-16T20:12:13.7683882Z Content type 'binary/octet-stream' length 26261 bytes (25 KB) 2021-05-16T20:12:13.7684727Z ================================================== 2021-05-16T20:12:13.7685349Z downloaded 25 KB 2021-05-16T20:12:13.7685776Z 2021-05-16T20:12:13.7687225Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ps_1.6.0.tar.gz' 2021-05-16T20:12:13.8069167Z Content type 'binary/octet-stream' length 120042 bytes (117 KB) 2021-05-16T20:12:13.8201731Z ================================================== 2021-05-16T20:12:13.8203408Z downloaded 117 KB 2021-05-16T20:12:13.8204775Z 2021-05-16T20:12:13.8235854Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/processx_3.5.2.tar.gz' 2021-05-16T20:12:14.1639005Z Content type 'binary/octet-stream' length 141949 bytes (138 KB) 2021-05-16T20:12:14.1757554Z ================================================== 2021-05-16T20:12:14.1758937Z downloaded 138 KB 2021-05-16T20:12:14.1759703Z 2021-05-16T20:12:14.1797577Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/praise_1.0.0.tar.gz' 2021-05-16T20:12:14.5338273Z Content type 'application/x-tar' length 6100 bytes 2021-05-16T20:12:14.5339526Z ================================================== 2021-05-16T20:12:14.5340400Z downloaded 6100 bytes 2021-05-16T20:12:14.5340738Z 2021-05-16T20:12:14.5373094Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgload_1.2.1.tar.gz' 2021-05-16T20:12:14.9730258Z Content type 'binary/octet-stream' length 60723 bytes (59 KB) 2021-05-16T20:12:14.9782224Z ================================================== 2021-05-16T20:12:14.9782727Z downloaded 59 KB 2021-05-16T20:12:14.9783000Z 2021-05-16T20:12:14.9816196Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/evaluate_0.14.tar.gz' 2021-05-16T20:12:16.5235328Z Content type 'application/x-tar' length 23661 bytes (23 KB) 2021-05-16T20:12:16.5237524Z ================================================== 2021-05-16T20:12:16.5238518Z downloaded 23 KB 2021-05-16T20:12:16.5238865Z 2021-05-16T20:12:16.5276241Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ellipsis_0.3.2.tar.gz' 2021-05-16T20:12:16.9290460Z Content type 'binary/octet-stream' length 8130 bytes 2021-05-16T20:12:16.9291646Z ================================================== 2021-05-16T20:12:16.9292775Z downloaded 8130 bytes 2021-05-16T20:12:16.9293080Z 2021-05-16T20:12:16.9400382Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/digest_0.6.27.tar.gz' 2021-05-16T20:12:17.3308033Z Content type 'binary/octet-stream' length 164442 bytes (160 KB) 2021-05-16T20:12:17.3419835Z ================================================== 2021-05-16T20:12:17.3420831Z downloaded 160 KB 2021-05-16T20:12:17.3421212Z 2021-05-16T20:12:17.3459479Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/callr_3.7.0.tar.gz' 2021-05-16T20:12:18.3712190Z Content type 'binary/octet-stream' length 74923 bytes (73 KB) 2021-05-16T20:12:18.3797717Z ================================================== 2021-05-16T20:12:18.3798617Z downloaded 73 KB 2021-05-16T20:12:18.3799025Z 2021-05-16T20:12:18.3832833Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brio_1.1.2.tar.gz' 2021-05-16T20:12:18.9397046Z Content type 'binary/octet-stream' length 12096 bytes (11 KB) 2021-05-16T20:12:18.9399222Z ================================================== 2021-05-16T20:12:18.9399658Z downloaded 11 KB 2021-05-16T20:12:18.9399949Z 2021-05-16T20:12:18.9432975Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xml2_1.3.2.tar.gz' 2021-05-16T20:12:19.3628710Z Content type 'binary/octet-stream' length 272736 bytes (266 KB) 2021-05-16T20:12:19.3793732Z ================================================== 2021-05-16T20:12:19.3794698Z downloaded 266 KB 2021-05-16T20:12:19.3795242Z 2021-05-16T20:12:19.3828328Z trying URL 'https://cloud.r-project.org/src/contrib/xfun_0.23.tar.gz' 2021-05-16T20:12:19.4156499Z Content type 'application/x-gzip' length 111696 bytes (109 KB) 2021-05-16T20:12:19.4260714Z ================================================== 2021-05-16T20:12:19.4261535Z downloaded 109 KB 2021-05-16T20:12:19.4262060Z 2021-05-16T20:12:19.4286228Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/markdown_1.1.tar.gz' 2021-05-16T20:12:20.7523881Z Content type 'application/x-tar' length 81636 bytes (79 KB) 2021-05-16T20:12:20.7593406Z ================================================== 2021-05-16T20:12:20.7597097Z downloaded 79 KB 2021-05-16T20:12:20.7597631Z 2021-05-16T20:12:20.7630151Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/highr_0.9.tar.gz' 2021-05-16T20:12:23.9100165Z Content type 'binary/octet-stream' length 15361 bytes (15 KB) 2021-05-16T20:12:23.9101494Z ================================================== 2021-05-16T20:12:23.9102089Z downloaded 15 KB 2021-05-16T20:12:23.9102520Z 2021-05-16T20:12:23.9137049Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringr_1.4.0.tar.gz' 2021-05-16T20:12:24.9891924Z Content type 'application/x-tar' length 135526 bytes (132 KB) 2021-05-16T20:12:25.0018821Z ================================================== 2021-05-16T20:12:25.0019779Z downloaded 132 KB 2021-05-16T20:12:25.0058194Z 2021-05-16T20:12:25.0059708Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringi_1.6.1.tar.gz' 2021-05-16T20:12:25.5123979Z Content type 'binary/octet-stream' length 7574951 bytes (7.2 MB) 2021-05-16T20:12:25.6282594Z ================================================== 2021-05-16T20:12:25.6283677Z downloaded 7.2 MB 2021-05-16T20:12:25.6284202Z 2021-05-16T20:12:25.6318477Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/Rcpp_1.0.6.tar.gz' 2021-05-16T20:12:26.0254972Z Content type 'binary/octet-stream' length 2954251 bytes (2.8 MB) 2021-05-16T20:12:26.0761659Z ================================================== 2021-05-16T20:12:26.0762666Z downloaded 2.8 MB 2021-05-16T20:12:26.0763302Z 2021-05-16T20:12:26.0800062Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/knitr_1.33.tar.gz' 2021-05-16T20:12:26.8592583Z Content type 'binary/octet-stream' length 890176 bytes (869 KB) 2021-05-16T20:12:26.9246194Z ================================================== 2021-05-16T20:12:26.9246671Z downloaded 869 KB 2021-05-16T20:12:26.9246937Z 2021-05-16T20:12:26.9280342Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/commonmark_1.7.tar.gz' 2021-05-16T20:12:27.3707155Z Content type 'application/x-tar' length 134376 bytes (131 KB) 2021-05-16T20:12:27.3828649Z ================================================== 2021-05-16T20:12:27.3829507Z downloaded 131 KB 2021-05-16T20:12:27.3830119Z 2021-05-16T20:12:27.3867876Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brew_1.0-6.tar.gz' 2021-05-16T20:12:27.6904011Z Content type 'application/x-tar' length 83765 bytes (81 KB) 2021-05-16T20:12:27.6905740Z ================================================== 2021-05-16T20:12:27.6906451Z downloaded 81 KB 2021-05-16T20:12:27.6906954Z 2021-05-16T20:12:27.6941625Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xopen_1.0.0.tar.gz' 2021-05-16T20:12:27.9759406Z Content type 'application/x-tar' length 11313 bytes (11 KB) 2021-05-16T20:12:27.9760789Z ================================================== 2021-05-16T20:12:27.9761445Z downloaded 11 KB 2021-05-16T20:12:27.9761913Z 2021-05-16T20:12:27.9796235Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sessioninfo_1.1.1.tar.gz' 2021-05-16T20:12:28.2660675Z Content type 'application/x-tar' length 45020 bytes (43 KB) 2021-05-16T20:12:28.2714111Z ================================================== 2021-05-16T20:12:28.2714597Z downloaded 43 KB 2021-05-16T20:12:28.2714864Z 2021-05-16T20:12:28.2749666Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/prettyunits_1.1.1.tar.gz' 2021-05-16T20:12:28.5456194Z Content type 'binary/octet-stream' length 10377 bytes (10 KB) 2021-05-16T20:12:28.5457645Z ================================================== 2021-05-16T20:12:28.5458319Z downloaded 10 KB 2021-05-16T20:12:28.5458831Z 2021-05-16T20:12:28.5486590Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgbuild_1.2.0.tar.gz' 2021-05-16T20:12:28.8734654Z Content type 'binary/octet-stream' length 30622 bytes (29 KB) 2021-05-16T20:12:28.8740988Z ================================================== 2021-05-16T20:12:28.8741711Z downloaded 29 KB 2021-05-16T20:12:28.8742222Z 2021-05-16T20:12:28.8776965Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/testthat_3.0.2.tar.gz' 2021-05-16T20:12:29.2979997Z Content type 'binary/octet-stream' length 678280 bytes (662 KB) 2021-05-16T20:12:29.3319475Z ================================================== 2021-05-16T20:12:29.3320043Z downloaded 662 KB 2021-05-16T20:12:29.3320298Z 2021-05-16T20:12:29.3357824Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rversions_2.0.2.tar.gz' 2021-05-16T20:12:29.6279479Z Content type 'binary/octet-stream' length 40913 bytes (39 KB) 2021-05-16T20:12:29.6282015Z ================================================== 2021-05-16T20:12:29.6282492Z downloaded 39 KB 2021-05-16T20:12:29.6282779Z 2021-05-16T20:12:29.6319140Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/roxygen2_7.1.1.tar.gz' 2021-05-16T20:12:29.9802167Z Content type 'binary/octet-stream' length 255098 bytes (249 KB) 2021-05-16T20:12:30.0086360Z ================================================== 2021-05-16T20:12:30.0086942Z downloaded 249 KB 2021-05-16T20:12:30.0087252Z 2021-05-16T20:12:30.0126300Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rcmdcheck_1.3.3.tar.gz' 2021-05-16T20:12:30.3043183Z Content type 'application/x-tar' length 44991 bytes (43 KB) 2021-05-16T20:12:30.3045548Z ================================================== 2021-05-16T20:12:30.3046048Z downloaded 43 KB 2021-05-16T20:12:30.3046354Z 2021-05-16T20:12:30.3087417Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/devtools_2.4.1.tar.gz' 2021-05-16T20:12:31.4335570Z Content type 'binary/octet-stream' length 370450 bytes (361 KB) 2021-05-16T20:12:31.4549848Z ================================================== 2021-05-16T20:12:31.4550834Z downloaded 361 KB 2021-05-16T20:12:31.4551350Z 2021-05-16T20:12:31.7571649Z * installing *source* package ‘utf8’ ... 2021-05-16T20:12:31.7632595Z ** package ‘utf8’ successfully unpacked and MD5 sums checked 2021-05-16T20:12:31.7633746Z ** using staged installation 2021-05-16T20:12:31.7758832Z ** libs 2021-05-16T20:12:31.7812446Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c as_utf8.c -o as_utf8.o 2021-05-16T20:12:31.8443302Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c bytes.c -o bytes.o 2021-05-16T20:12:31.9792432Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c context.c -o context.o 2021-05-16T20:12:32.0361019Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:12:32.0747675Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c render.c -o render.o 2021-05-16T20:12:32.1328941Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c render_table.c -o render_table.o 2021-05-16T20:12:32.2861123Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c string.c -o string.o 2021-05-16T20:12:32.3453436Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c text.c -o text.o 2021-05-16T20:12:32.4680891Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_encode.c -o utf8_encode.o 2021-05-16T20:12:32.5433980Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_format.c -o utf8_format.o 2021-05-16T20:12:32.6270655Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_normalize.c -o utf8_normalize.o 2021-05-16T20:12:32.6893345Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_valid.c -o utf8_valid.o 2021-05-16T20:12:32.7442435Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_width.c -o utf8_width.o 2021-05-16T20:12:32.8013762Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c util.c -o util.o 2021-05-16T20:12:32.8520611Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/array.c -o utf8lite/src/array.o 2021-05-16T20:12:32.9037173Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/char.c -o utf8lite/src/char.o 2021-05-16T20:12:32.9680643Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/encode.c -o utf8lite/src/encode.o 2021-05-16T20:12:33.0219181Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/error.c -o utf8lite/src/error.o 2021-05-16T20:12:33.0585830Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/escape.c -o utf8lite/src/escape.o 2021-05-16T20:12:33.1185659Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/graph.c -o utf8lite/src/graph.o 2021-05-16T20:12:33.1609993Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o 2021-05-16T20:12:33.3537089Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o 2021-05-16T20:12:33.6399123Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/render.c -o utf8lite/src/render.o 2021-05-16T20:12:33.8027726Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/text.c -o utf8lite/src/text.o 2021-05-16T20:12:33.8688210Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o 2021-05-16T20:12:33.9268415Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o 2021-05-16T20:12:33.9942026Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o 2021-05-16T20:12:34.0628081Z ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o 2021-05-16T20:12:34.0703407Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:12:34.1049342Z installing to /home/runner/work/_temp/Library/00LOCK-utf8/00new/utf8/libs 2021-05-16T20:12:34.1068544Z ** R 2021-05-16T20:12:34.1150118Z ** inst 2021-05-16T20:12:34.1158474Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:12:34.5342952Z ** help 2021-05-16T20:12:34.5622565Z *** installing help indices 2021-05-16T20:12:34.5858438Z ** building package indices 2021-05-16T20:12:34.7718769Z ** installing vignettes 2021-05-16T20:12:34.7773020Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:12:34.9494771Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:12:34.9672169Z ** testing if installed package can be loaded from final location 2021-05-16T20:12:35.1414116Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:12:35.1415184Z * DONE (utf8) 2021-05-16T20:12:35.3364060Z * installing *source* package ‘pkgconfig’ ... 2021-05-16T20:12:35.3373949Z ** package ‘pkgconfig’ successfully unpacked and MD5 sums checked 2021-05-16T20:12:35.3375916Z ** using staged installation 2021-05-16T20:12:35.3483705Z ** R 2021-05-16T20:12:35.3508760Z ** inst 2021-05-16T20:12:35.3516913Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:12:35.5688991Z ** help 2021-05-16T20:12:35.5893500Z *** installing help indices 2021-05-16T20:12:35.6054036Z ** building package indices 2021-05-16T20:12:35.7853423Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:12:35.9503191Z ** testing if installed package can be loaded from final location 2021-05-16T20:12:36.1145772Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:12:36.1151008Z * DONE (pkgconfig) 2021-05-16T20:12:36.3775252Z * installing *source* package ‘fansi’ ... 2021-05-16T20:12:36.3808787Z ** package ‘fansi’ successfully unpacked and MD5 sums checked 2021-05-16T20:12:36.3810001Z ** using staged installation 2021-05-16T20:12:36.3933254Z ** libs 2021-05-16T20:12:36.4008177Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c assumptions.c -o assumptions.o 2021-05-16T20:12:36.4385219Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c has.c -o has.o 2021-05-16T20:12:36.4959366Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:12:36.5385945Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c nchar.c -o nchar.o 2021-05-16T20:12:36.6040787Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read.c -o read.o 2021-05-16T20:12:37.0305241Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rnchar.c -o rnchar.o 2021-05-16T20:12:37.0667735Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c state.c -o state.o 2021-05-16T20:12:37.4081671Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c strip.c -o strip.o 2021-05-16T20:12:37.5386455Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c strsplit.c -o strsplit.o 2021-05-16T20:12:37.5822641Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c tabs.c -o tabs.o 2021-05-16T20:12:37.6985592Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c tohtml.c -o tohtml.o 2021-05-16T20:12:37.9318873Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unhandled.c -o unhandled.o 2021-05-16T20:12:38.0291579Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unique.c -o unique.o 2021-05-16T20:12:38.0840921Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-16T20:12:38.1412829Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T20:12:38.2986304Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c wrap.c -o wrap.o 2021-05-16T20:12:38.5974881Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fansi.so assumptions.o has.o init.o nchar.o read.o rnchar.o state.o strip.o strsplit.o tabs.o tohtml.o unhandled.o unique.o utf8.o utils.o wrap.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:12:38.6254071Z installing to /home/runner/work/_temp/Library/00LOCK-fansi/00new/fansi/libs 2021-05-16T20:12:38.6258144Z ** R 2021-05-16T20:12:38.6352606Z ** inst 2021-05-16T20:12:38.6361397Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:12:39.1973090Z ** help 2021-05-16T20:12:39.2599424Z *** installing help indices 2021-05-16T20:12:39.2960580Z ** building package indices 2021-05-16T20:12:39.5053257Z ** installing vignettes 2021-05-16T20:12:39.5086845Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:12:39.6764444Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:12:39.6940393Z ** testing if installed package can be loaded from final location 2021-05-16T20:12:39.8683673Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:12:39.8693383Z * DONE (fansi) 2021-05-16T20:12:40.2862427Z * installing *source* package ‘diffobj’ ... 2021-05-16T20:12:40.2958757Z ** package ‘diffobj’ successfully unpacked and MD5 sums checked 2021-05-16T20:12:40.2960039Z ** using staged installation 2021-05-16T20:12:40.3098109Z ** libs 2021-05-16T20:12:40.3145437Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diff.c -o diff.o 2021-05-16T20:12:40.5086173Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffobj.c -o diffobj.o 2021-05-16T20:12:40.5655180Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:12:40.6080468Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o diffobj.so diff.o diffobj.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:12:40.6294179Z installing to /home/runner/work/_temp/Library/00LOCK-diffobj/00new/diffobj/libs 2021-05-16T20:12:40.6310487Z ** R 2021-05-16T20:12:40.6691393Z ** inst 2021-05-16T20:12:40.6706747Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:12:46.3034581Z ** help 2021-05-16T20:12:46.4908095Z *** installing help indices 2021-05-16T20:12:46.6186520Z ** building package indices 2021-05-16T20:12:46.8853312Z ** installing vignettes 2021-05-16T20:12:46.8908120Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:12:47.1698747Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:12:47.1867625Z ** testing if installed package can be loaded from final location 2021-05-16T20:12:47.5811794Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:12:47.5888486Z * DONE (diffobj) 2021-05-16T20:12:47.8683919Z * installing *source* package ‘ps’ ... 2021-05-16T20:12:47.8721103Z ** package ‘ps’ successfully unpacked and MD5 sums checked 2021-05-16T20:12:47.8722276Z ** using staged installation 2021-05-16T20:12:48.0611872Z ** libs 2021-05-16T20:12:48.0672568Z gcc -g -O2 -Wall px.c -o px 2021-05-16T20:12:48.1906667Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:12:48.2528631Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-common.c -o api-common.o 2021-05-16T20:12:48.3162363Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c common.c -o common.o 2021-05-16T20:12:48.3796150Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c extra.c -o extra.o 2021-05-16T20:12:48.5310184Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dummy.c -o dummy.o 2021-05-16T20:12:48.5788384Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error-codes.c -o error-codes.o 2021-05-16T20:12:48.8401905Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c posix.c -o posix.o 2021-05-16T20:12:49.0144863Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-posix.c -o api-posix.o 2021-05-16T20:12:49.1196049Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c linux.c -o linux.o 2021-05-16T20:12:49.2817244Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-linux.c -o api-linux.o 2021-05-16T20:12:49.6966952Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o ps.so init.o api-common.o common.o extra.o dummy.o error-codes.o posix.o api-posix.o linux.o api-linux.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:12:49.7254862Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-ps/00new/ps 2021-05-16T20:12:49.7258519Z ** R 2021-05-16T20:12:49.7361016Z ** inst 2021-05-16T20:12:49.7370479Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:12:50.6660435Z ** help 2021-05-16T20:12:50.7974412Z *** installing help indices 2021-05-16T20:12:50.8799359Z ** building package indices 2021-05-16T20:12:51.1360507Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:12:51.3091455Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:12:51.3292039Z ** testing if installed package can be loaded from final location 2021-05-16T20:12:51.5133714Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:12:51.5145459Z * DONE (ps) 2021-05-16T20:12:51.7100486Z * installing *source* package ‘praise’ ... 2021-05-16T20:12:51.7109553Z ** package ‘praise’ successfully unpacked and MD5 sums checked 2021-05-16T20:12:51.7110579Z ** using staged installation 2021-05-16T20:12:51.7208962Z ** R 2021-05-16T20:12:51.7245839Z ** inst 2021-05-16T20:12:51.7253753Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:12:51.9373237Z ** help 2021-05-16T20:12:51.9482099Z *** installing help indices 2021-05-16T20:12:51.9688350Z ** building package indices 2021-05-16T20:12:52.1462308Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:12:52.3103863Z ** testing if installed package can be loaded from final location 2021-05-16T20:12:52.4706251Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:12:52.4712171Z * DONE (praise) 2021-05-16T20:12:52.7835328Z * installing *source* package ‘pkgload’ ... 2021-05-16T20:12:52.7879876Z ** package ‘pkgload’ successfully unpacked and MD5 sums checked 2021-05-16T20:12:52.7882300Z ** using staged installation 2021-05-16T20:12:52.8016005Z ** R 2021-05-16T20:12:52.8111238Z ** inst 2021-05-16T20:12:52.8117946Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:12:53.6286507Z ** help 2021-05-16T20:12:53.6808448Z *** installing help indices 2021-05-16T20:12:53.7242067Z ** building package indices 2021-05-16T20:12:53.9363129Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:12:54.3645052Z ** testing if installed package can be loaded from final location 2021-05-16T20:12:54.7939755Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:12:54.7953633Z * DONE (pkgload) 2021-05-16T20:12:55.0225621Z * installing *source* package ‘evaluate’ ... 2021-05-16T20:12:55.0243163Z ** package ‘evaluate’ successfully unpacked and MD5 sums checked 2021-05-16T20:12:55.0244361Z ** using staged installation 2021-05-16T20:12:55.0373644Z ** R 2021-05-16T20:12:55.0422568Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:12:55.4971113Z ** help 2021-05-16T20:12:55.5247339Z *** installing help indices 2021-05-16T20:12:55.5552412Z ** building package indices 2021-05-16T20:12:55.7492473Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:12:55.9157320Z ** testing if installed package can be loaded from final location 2021-05-16T20:12:56.0856896Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:12:56.0864466Z * DONE (evaluate) 2021-05-16T20:12:56.2886553Z * installing *source* package ‘ellipsis’ ... 2021-05-16T20:12:56.2896999Z ** package ‘ellipsis’ successfully unpacked and MD5 sums checked 2021-05-16T20:12:56.2898078Z ** using staged installation 2021-05-16T20:12:56.3033305Z ** libs 2021-05-16T20:12:56.3080562Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dots.c -o dots.o 2021-05-16T20:12:56.3790766Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:12:56.4220294Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o ellipsis.so dots.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:12:56.4434117Z installing to /home/runner/work/_temp/Library/00LOCK-ellipsis/00new/ellipsis/libs 2021-05-16T20:12:56.4447563Z ** R 2021-05-16T20:12:56.4479734Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:12:56.6964220Z ** help 2021-05-16T20:12:56.7203732Z *** installing help indices 2021-05-16T20:12:56.7389237Z ** building package indices 2021-05-16T20:12:56.9248149Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:12:57.1097830Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:12:57.1268761Z ** testing if installed package can be loaded from final location 2021-05-16T20:12:57.3096796Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:12:57.3103002Z * DONE (ellipsis) 2021-05-16T20:12:57.5646591Z * installing *source* package ‘digest’ ... 2021-05-16T20:12:57.5676091Z ** package ‘digest’ successfully unpacked and MD5 sums checked 2021-05-16T20:12:57.5677203Z ** using staged installation 2021-05-16T20:12:57.5780824Z ** libs 2021-05-16T20:12:57.5834777Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c SpookyV2.cpp -o SpookyV2.o 2021-05-16T20:12:57.7497312Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o 2021-05-16T20:12:58.0473549Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3.c -o blake3.o 2021-05-16T20:12:58.6998700Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3_dispatch.c -o blake3_dispatch.o 2021-05-16T20:12:58.9176514Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3_portable.c -o blake3_portable.o 2021-05-16T20:12:59.4294815Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c crc32.c -o crc32.o 2021-05-16T20:12:59.5005511Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest.c -o digest.o 2021-05-16T20:12:59.7013803Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest2int.c -o digest2int.o 2021-05-16T20:12:59.7565993Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:12:59.7783029Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c md5.c -o md5.o 2021-05-16T20:12:59.9138671Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pmurhash.c -o pmurhash.o 2021-05-16T20:12:59.9637172Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c raes.c -o raes.o 2021-05-16T20:13:00.0331556Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha1.c -o sha1.o 2021-05-16T20:13:00.3162834Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha2.c -o sha2.o 2021-05-16T20:13:00.4239167Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha256.c -o sha256.o 2021-05-16T20:13:00.9614998Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c spooky_serialize.cpp -o spooky_serialize.o 2021-05-16T20:13:01.0693431Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c xxhash.c -o xxhash.o 2021-05-16T20:13:01.3024999Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o digest.so SpookyV2.o aes.o blake3.o blake3_dispatch.o blake3_portable.o crc32.o digest.o digest2int.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o spooky_serialize.o xxhash.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:13:01.3424356Z installing to /home/runner/work/_temp/Library/00LOCK-digest/00new/digest/libs 2021-05-16T20:13:01.3444313Z ** R 2021-05-16T20:13:01.3501184Z ** demo 2021-05-16T20:13:01.3507249Z ** inst 2021-05-16T20:13:01.3523768Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:13:01.8364343Z ** help 2021-05-16T20:13:01.8728408Z *** installing help indices 2021-05-16T20:13:01.8980271Z ** building package indices 2021-05-16T20:13:02.0933380Z ** installing vignettes 2021-05-16T20:13:02.0935068Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:13:02.2661232Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:13:02.2835315Z ** testing if installed package can be loaded from final location 2021-05-16T20:13:02.4558327Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:13:02.4568695Z * DONE (digest) 2021-05-16T20:13:02.6650032Z * installing *source* package ‘brio’ ... 2021-05-16T20:13:02.6664053Z ** package ‘brio’ successfully unpacked and MD5 sums checked 2021-05-16T20:13:02.6666107Z ** using staged installation 2021-05-16T20:13:02.6833040Z ** libs 2021-05-16T20:13:02.6882383Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c brio.c -o brio.o 2021-05-16T20:13:02.7245615Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c file_line_endings.c -o file_line_endings.o 2021-05-16T20:13:02.7706354Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:13:02.8112657Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_file.c -o read_file.o 2021-05-16T20:13:02.8607219Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_file_raw.c -o read_file_raw.o 2021-05-16T20:13:02.9118322Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_lines.c -o read_lines.o 2021-05-16T20:13:02.9870484Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write_file.c -o write_file.o 2021-05-16T20:13:03.0306724Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write_lines.c -o write_lines.o 2021-05-16T20:13:03.0834643Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o brio.so brio.o file_line_endings.o init.o read_file.o read_file_raw.o read_lines.o write_file.o write_lines.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:13:03.1094020Z installing to /home/runner/work/_temp/Library/00LOCK-brio/00new/brio/libs 2021-05-16T20:13:03.1095423Z ** R 2021-05-16T20:13:03.1108553Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:13:03.3267520Z ** help 2021-05-16T20:13:03.3462206Z *** installing help indices 2021-05-16T20:13:03.3657545Z ** building package indices 2021-05-16T20:13:03.5508796Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:13:03.7199782Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:13:03.7375618Z ** testing if installed package can be loaded from final location 2021-05-16T20:13:03.9054320Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:13:03.9059178Z * DONE (brio) 2021-05-16T20:13:04.1821309Z * installing *source* package ‘xml2’ ... 2021-05-16T20:13:04.1858616Z ** package ‘xml2’ successfully unpacked and MD5 sums checked 2021-05-16T20:13:04.1859755Z ** using staged installation 2021-05-16T20:13:04.2114881Z Found pkg-config cflags and libs! 2021-05-16T20:13:04.2931153Z Using PKG_CFLAGS=-I/usr/include/libxml2 2021-05-16T20:13:04.2932011Z Using PKG_LIBS=-lxml2 2021-05-16T20:13:04.5442382Z ** libs 2021-05-16T20:13:04.5492657Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c connection.cpp -o connection.o 2021-05-16T20:13:05.0302114Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:13:05.0741966Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_doc.cpp -o xml2_doc.o 2021-05-16T20:13:05.5909212Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_init.cpp -o xml2_init.o 2021-05-16T20:13:05.9970600Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_namespace.cpp -o xml2_namespace.o 2021-05-16T20:13:06.6516825Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_node.cpp -o xml2_node.o 2021-05-16T20:13:08.4048099Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_output.cpp -o xml2_output.o 2021-05-16T20:13:08.9309733Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_schema.cpp -o xml2_schema.o 2021-05-16T20:13:09.4741981Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_url.cpp -o xml2_url.o 2021-05-16T20:13:09.9173029Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_xpath.cpp -o xml2_xpath.o 2021-05-16T20:13:10.3307773Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o xml2.so connection.o init.o xml2_doc.o xml2_init.o xml2_namespace.o xml2_node.o xml2_output.o xml2_schema.o xml2_url.o xml2_xpath.o -lxml2 -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:13:10.4134246Z installing to /home/runner/work/_temp/Library/00LOCK-xml2/00new/xml2/libs 2021-05-16T20:13:10.4156624Z ** R 2021-05-16T20:13:10.4261465Z ** inst 2021-05-16T20:13:10.4274278Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:13:11.2757592Z ** help 2021-05-16T20:13:11.3653377Z *** installing help indices 2021-05-16T20:13:11.4128451Z ** building package indices 2021-05-16T20:13:11.6301609Z ** installing vignettes 2021-05-16T20:13:11.6404396Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:13:11.8194523Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:13:11.8377622Z ** testing if installed package can be loaded from final location 2021-05-16T20:13:12.0275469Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:13:12.0288719Z * DONE (xml2) 2021-05-16T20:13:12.2949660Z * installing *source* package ‘xfun’ ... 2021-05-16T20:13:12.2981710Z ** package ‘xfun’ successfully unpacked and MD5 sums checked 2021-05-16T20:13:12.2983833Z ** using staged installation 2021-05-16T20:13:12.3127627Z ** libs 2021-05-16T20:13:12.3200160Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T20:13:12.4154592Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:13:12.4586975Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o xfun.so base64.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:13:12.4911375Z installing to /home/runner/work/_temp/Library/00LOCK-xfun/00new/xfun/libs 2021-05-16T20:13:12.4923474Z ** R 2021-05-16T20:13:12.5062711Z ** inst 2021-05-16T20:13:12.5073916Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:13:13.6945983Z ** help 2021-05-16T20:13:13.8328617Z *** installing help indices 2021-05-16T20:13:13.9283721Z ** building package indices 2021-05-16T20:13:14.1924753Z ** installing vignettes 2021-05-16T20:13:14.1992617Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:13:14.3718368Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:13:14.3890973Z ** testing if installed package can be loaded from final location 2021-05-16T20:13:14.5771713Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:13:14.5787599Z * DONE (xfun) 2021-05-16T20:13:16.9214170Z * installing *source* package ‘stringi’ ... 2021-05-16T20:13:17.0310498Z ** package ‘stringi’ successfully unpacked and MD5 sums checked 2021-05-16T20:13:17.0311881Z ** using staged installation 2021-05-16T20:13:17.1437701Z checking for R_HOME... /opt/R/devel/lib/R 2021-05-16T20:13:17.1438872Z checking for R... /opt/R/devel/lib/R/bin/R 2021-05-16T20:13:17.2915168Z checking for endianness... little 2021-05-16T20:13:17.4419606Z checking for R >= 3.1.0 for C++11 use... yes 2021-05-16T20:13:17.5941381Z checking for R < 3.4.0 for CXX1X flag use... no 2021-05-16T20:13:17.5945492Z checking for cat... /usr/bin/cat 2021-05-16T20:13:17.8093122Z checking for local ICUDT_DIR... icu69/data 2021-05-16T20:13:17.8094049Z checking for gcc... gcc 2021-05-16T20:13:17.8652538Z checking whether the C compiler works... yes 2021-05-16T20:13:17.8653842Z checking for C compiler default output file name... a.out 2021-05-16T20:13:17.9010829Z checking for suffix of executables... 2021-05-16T20:13:17.9438921Z checking whether we are cross compiling... no 2021-05-16T20:13:17.9669598Z checking for suffix of object files... o 2021-05-16T20:13:17.9868367Z checking whether we are using the GNU C compiler... yes 2021-05-16T20:13:18.0059347Z checking whether gcc accepts -g... yes 2021-05-16T20:13:18.0385728Z checking for gcc option to accept ISO C89... none needed 2021-05-16T20:13:18.0583207Z checking how to run the C preprocessor... gcc -E 2021-05-16T20:13:18.0798086Z checking for grep that handles long lines and -e... /usr/bin/grep 2021-05-16T20:13:18.0814107Z checking for egrep... /usr/bin/grep -E 2021-05-16T20:13:18.1784935Z checking for ANSI C header files... yes 2021-05-16T20:13:18.2048985Z checking for sys/types.h... yes 2021-05-16T20:13:18.2354622Z checking for sys/stat.h... yes 2021-05-16T20:13:18.2659950Z checking for stdlib.h... yes 2021-05-16T20:13:18.2984226Z checking for string.h... yes 2021-05-16T20:13:18.3309679Z checking for memory.h... yes 2021-05-16T20:13:18.3633375Z checking for strings.h... yes 2021-05-16T20:13:18.3960052Z checking for inttypes.h... yes 2021-05-16T20:13:18.4285185Z checking for stdint.h... yes 2021-05-16T20:13:18.4654134Z checking for unistd.h... yes 2021-05-16T20:13:18.5163820Z checking elf.h usability... yes 2021-05-16T20:13:18.5265073Z checking elf.h presence... yes 2021-05-16T20:13:18.5265997Z checking for elf.h... yes 2021-05-16T20:13:18.5862162Z checking whether we are using the GNU C++ compiler... yes 2021-05-16T20:13:18.6062382Z checking whether g++ -std=gnu++11 accepts -g... yes 2021-05-16T20:13:18.9060848Z checking whether the C++ compiler supports the long long type... yes 2021-05-16T20:13:18.9295799Z checking whether the compiler implements namespaces... yes 2021-05-16T20:13:19.0703832Z checking whether the compiler supports Standard Template Library... yes 2021-05-16T20:13:19.5586865Z checking whether std::map is available... yes 2021-05-16T20:13:19.5607958Z checking for pkg-config... /usr/bin/pkg-config 2021-05-16T20:13:19.5752721Z checking with pkg-config for the system ICU4C... 66.1 2021-05-16T20:13:19.5776786Z checking for ICU4C >= 55... yes 2021-05-16T20:13:19.5841049Z checking for additional required CPPFLAGS, LDFLAGS, and LIBS... done 2021-05-16T20:13:19.9425147Z checking whether an ICU4C-based project can be built... yes 2021-05-16T20:13:19.9990206Z checking programmatically for sufficient U_ICU_VERSION_MAJOR_NUM... yes 2021-05-16T20:13:20.2624308Z checking programmatically if U_CHARSET_IS_UTF8 is defined and set... yes 2021-05-16T20:13:21.0221139Z checking the capabilities of the ICU data library (ucnv, uloc, utrans)... yes 2021-05-16T20:13:21.5826659Z checking the capabilities of the ICU data library (ucol)... yes 2021-05-16T20:13:21.6165294Z configure: creating ./config.status 2021-05-16T20:13:21.6911431Z config.status: creating src/Makevars 2021-05-16T20:13:21.7082246Z config.status: creating src/uconfig_local.h 2021-05-16T20:13:21.7252013Z config.status: creating src/install.libs.R 2021-05-16T20:13:21.7401470Z 2021-05-16T20:13:21.7402353Z *** stringi configure summary: 2021-05-16T20:13:21.7402982Z ICU_FOUND=1 2021-05-16T20:13:21.7403593Z STRINGI_CXXSTD=CXX_STD=CXX11 2021-05-16T20:13:21.7404773Z STRINGI_CFLAGS= -fpic 2021-05-16T20:13:21.7405745Z STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H 2021-05-16T20:13:21.7406634Z STRINGI_CXXFLAGS= -fpic 2021-05-16T20:13:21.7407574Z STRINGI_LDFLAGS=-L/usr/lib/x86_64-linux-gnu 2021-05-16T20:13:21.7408577Z STRINGI_LIBS=-licui18n -licuuc -licudata 2021-05-16T20:13:21.7409147Z 2021-05-16T20:13:21.7409931Z *** Compiler settings used: 2021-05-16T20:13:21.7410425Z CC=gcc 2021-05-16T20:13:21.7411193Z LD=g++ -std=gnu++14 2021-05-16T20:13:21.7411748Z CFLAGS=-g -O2 -fpic 2021-05-16T20:13:21.7412810Z CPPFLAGS=-I/usr/local/include -UDEBUG -DNDEBUG 2021-05-16T20:13:21.7413473Z CXX=g++ -std=gnu++11 2021-05-16T20:13:21.7414035Z CXXFLAGS=-g -O2 -fpic 2021-05-16T20:13:21.7414455Z LDFLAGS= 2021-05-16T20:13:21.7414803Z LIBS= 2021-05-16T20:13:21.7415015Z 2021-05-16T20:13:21.7747845Z ** libs 2021-05-16T20:13:21.7831552Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_brkiter.cpp -o stri_brkiter.o 2021-05-16T20:13:22.4143711Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_collator.cpp -o stri_collator.o 2021-05-16T20:13:23.0081924Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_common.cpp -o stri_common.o 2021-05-16T20:13:23.6411278Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_compare.cpp -o stri_compare.o 2021-05-16T20:13:24.3297896Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_base.cpp -o stri_container_base.o 2021-05-16T20:13:24.8091761Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o 2021-05-16T20:13:25.6033444Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listint.cpp -o stri_container_listint.o 2021-05-16T20:13:26.1281823Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listraw.cpp -o stri_container_listraw.o 2021-05-16T20:13:26.6801496Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listutf8.cpp -o stri_container_listutf8.o 2021-05-16T20:13:27.2035276Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_regex.cpp -o stri_container_regex.o 2021-05-16T20:13:27.8155758Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_usearch.cpp -o stri_container_usearch.o 2021-05-16T20:13:28.4225978Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf16.cpp -o stri_container_utf16.o 2021-05-16T20:13:29.1104650Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8.cpp -o stri_container_utf8.o 2021-05-16T20:13:29.7390836Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o 2021-05-16T20:13:30.3162540Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o 2021-05-16T20:13:31.2145397Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_detection.cpp -o stri_encoding_detection.o 2021-05-16T20:13:32.6981413Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_management.cpp -o stri_encoding_management.o 2021-05-16T20:13:33.3417788Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_escape.cpp -o stri_escape.o 2021-05-16T20:13:33.9724956Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_exception.cpp -o stri_exception.o 2021-05-16T20:13:34.4707705Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ICU_settings.cpp -o stri_ICU_settings.o 2021-05-16T20:13:34.9677734Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_join.cpp -o stri_join.o 2021-05-16T20:13:35.8426081Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_length.cpp -o stri_length.o 2021-05-16T20:13:36.4795871Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_pad.cpp -o stri_pad.o 2021-05-16T20:13:37.0748777Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_prepare_arg.cpp -o stri_prepare_arg.o 2021-05-16T20:13:37.8099566Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_random.cpp -o stri_random.o 2021-05-16T20:13:38.5565695Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_reverse.cpp -o stri_reverse.o 2021-05-16T20:13:39.1018230Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_count.cpp -o stri_search_class_count.o 2021-05-16T20:13:39.7034431Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_detect.cpp -o stri_search_class_detect.o 2021-05-16T20:13:40.3144975Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_extract.cpp -o stri_search_class_extract.o 2021-05-16T20:13:41.1333816Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_locate.cpp -o stri_search_class_locate.o 2021-05-16T20:13:41.9300608Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_replace.cpp -o stri_search_class_replace.o 2021-05-16T20:13:42.8767529Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_split.cpp -o stri_search_class_split.o 2021-05-16T20:13:43.6433885Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o 2021-05-16T20:13:44.3307665Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_subset.cpp -o stri_search_class_subset.o 2021-05-16T20:13:45.0501380Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_trim.cpp -o stri_search_class_trim.o 2021-05-16T20:13:45.6737183Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_common.cpp -o stri_search_common.o 2021-05-16T20:13:46.2819874Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_count.cpp -o stri_search_coll_count.o 2021-05-16T20:13:46.8857419Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o 2021-05-16T20:13:47.5106691Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o 2021-05-16T20:13:48.2868230Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o 2021-05-16T20:13:49.0486176Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o 2021-05-16T20:13:49.8741319Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_split.cpp -o stri_search_coll_split.o 2021-05-16T20:13:50.6678759Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o 2021-05-16T20:13:51.3630846Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o 2021-05-16T20:13:52.0700916Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o 2021-05-16T20:13:52.5922648Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o 2021-05-16T20:13:53.2659287Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o 2021-05-16T20:13:53.9398506Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o 2021-05-16T20:13:54.6075182Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o 2021-05-16T20:13:55.1530752Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o 2021-05-16T20:13:55.6889813Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o 2021-05-16T20:13:56.4011108Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o 2021-05-16T20:13:57.1080803Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o 2021-05-16T20:13:57.8945997Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o 2021-05-16T20:13:58.6360782Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o 2021-05-16T20:13:59.3491878Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o 2021-05-16T20:13:59.9833196Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_in.cpp -o stri_search_in.o 2021-05-16T20:13:59.9974760Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_other_split.cpp -o stri_search_other_split.o 2021-05-16T20:14:00.7888376Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_count.cpp -o stri_search_regex_count.o 2021-05-16T20:14:01.3358413Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o 2021-05-16T20:14:01.8970796Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o 2021-05-16T20:14:02.6358160Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o 2021-05-16T20:14:03.3571652Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_match.cpp -o stri_search_regex_match.o 2021-05-16T20:14:04.2358892Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o 2021-05-16T20:14:04.8834758Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_split.cpp -o stri_search_regex_split.o 2021-05-16T20:14:05.6415778Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o 2021-05-16T20:14:06.2746101Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sort.cpp -o stri_sort.o 2021-05-16T20:14:07.7579529Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stats.cpp -o stri_stats.o 2021-05-16T20:14:08.3727316Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stringi.cpp -o stri_stringi.o 2021-05-16T20:14:08.9245420Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sub.cpp -o stri_sub.o 2021-05-16T20:14:09.7054950Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_test.cpp -o stri_test.o 2021-05-16T20:14:10.2204953Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_zone.cpp -o stri_time_zone.o 2021-05-16T20:14:10.7740871Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_calendar.cpp -o stri_time_calendar.o 2021-05-16T20:14:11.5429691Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_symbols.cpp -o stri_time_symbols.o 2021-05-16T20:14:12.2444799Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_format.cpp -o stri_time_format.o 2021-05-16T20:14:13.0485908Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_casemap.cpp -o stri_trans_casemap.o 2021-05-16T20:14:13.7019578Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_other.cpp -o stri_trans_other.o 2021-05-16T20:14:14.3764645Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_normalization.cpp -o stri_trans_normalization.o 2021-05-16T20:14:14.9662006Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o 2021-05-16T20:14:15.5260754Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ucnv.cpp -o stri_ucnv.o 2021-05-16T20:14:16.1092878Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_uloc.cpp -o stri_uloc.o 2021-05-16T20:14:16.6090398Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_utils.cpp -o stri_utils.o 2021-05-16T20:14:17.1491212Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_wrap.cpp -o stri_wrap.o 2021-05-16T20:14:18.4269374Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o stringi.so stri_brkiter.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_stats.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:14:18.6278331Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-stringi/00new/stringi 2021-05-16T20:14:18.7042719Z ** R 2021-05-16T20:14:18.7323840Z ** inst 2021-05-16T20:14:18.7331377Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:14:19.7252651Z ** help 2021-05-16T20:14:20.1281960Z *** installing help indices 2021-05-16T20:14:20.3247894Z ** building package indices 2021-05-16T20:14:20.6872996Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:14:20.8632988Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:14:20.8840582Z ** testing if installed package can be loaded from final location 2021-05-16T20:14:21.0727441Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:14:21.0742870Z * DONE (stringi) 2021-05-16T20:14:21.9780277Z * installing *source* package ‘Rcpp’ ... 2021-05-16T20:14:22.0124428Z ** package ‘Rcpp’ successfully unpacked and MD5 sums checked 2021-05-16T20:14:22.0125252Z ** using staged installation 2021-05-16T20:14:22.0229705Z ** libs 2021-05-16T20:14:22.0277895Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c api.cpp -o api.o 2021-05-16T20:14:24.9886638Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c attributes.cpp -o attributes.o 2021-05-16T20:14:39.6289092Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c barrier.cpp -o barrier.o 2021-05-16T20:14:39.8185204Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c date.cpp -o date.o 2021-05-16T20:14:42.9620869Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c module.cpp -o module.o 2021-05-16T20:14:48.9536817Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c rcpp_init.cpp -o rcpp_init.o 2021-05-16T20:14:51.7182666Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o Rcpp.so api.o attributes.o barrier.o date.o module.o rcpp_init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:14:51.8829550Z installing to /home/runner/work/_temp/Library/00LOCK-Rcpp/00new/Rcpp/libs 2021-05-16T20:14:51.8944390Z ** R 2021-05-16T20:14:51.9076047Z ** inst 2021-05-16T20:14:51.9457378Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:14:53.5234144Z ** help 2021-05-16T20:14:53.6165918Z *** installing help indices 2021-05-16T20:14:53.6787920Z ** building package indices 2021-05-16T20:14:53.9077073Z ** installing vignettes 2021-05-16T20:14:53.9139402Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:14:54.1682476Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:14:54.1903770Z ** testing if installed package can be loaded from final location 2021-05-16T20:14:54.4720232Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:14:54.4801101Z * DONE (Rcpp) 2021-05-16T20:14:54.7552118Z * installing *source* package ‘commonmark’ ... 2021-05-16T20:14:54.7591775Z ** package ‘commonmark’ successfully unpacked and MD5 sums checked 2021-05-16T20:14:54.7594810Z ** using staged installation 2021-05-16T20:14:54.7707097Z ** libs 2021-05-16T20:14:54.7761063Z rm -f cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o extensions.o init.o wrapper.o commonmark.so cmark/libstatcmark.a 2021-05-16T20:14:54.7790444Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions.c -o extensions.o 2021-05-16T20:14:54.8235835Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:14:54.8608973Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c wrapper.c -o wrapper.o 2021-05-16T20:14:54.9190153Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/cmark.c -o cmark/cmark.o 2021-05-16T20:14:54.9628879Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/node.c -o cmark/node.o 2021-05-16T20:14:55.2245994Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/iterator.c -o cmark/iterator.o 2021-05-16T20:14:55.3078396Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/blocks.c -o cmark/blocks.o 2021-05-16T20:14:55.7198966Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/inlines.c -o cmark/inlines.o 2021-05-16T20:14:56.3942034Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/scanners.c -o cmark/scanners.o 2021-05-16T20:14:58.0082136Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/utf8.c -o cmark/utf8.o 2021-05-16T20:15:00.9484072Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/buffer.c -o cmark/buffer.o 2021-05-16T20:15:01.0666291Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/references.c -o cmark/references.o 2021-05-16T20:15:01.1114201Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/render.c -o cmark/render.o 2021-05-16T20:15:01.2034614Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/man.c -o cmark/man.o 2021-05-16T20:15:01.2823041Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/xml.c -o cmark/xml.o 2021-05-16T20:15:01.3591981Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/html.c -o cmark/html.o 2021-05-16T20:15:01.5377046Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/commonmark.c -o cmark/commonmark.o 2021-05-16T20:15:01.7219197Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/latex.c -o cmark/latex.o 2021-05-16T20:15:01.8405353Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_href_e.c -o cmark/houdini_href_e.o 2021-05-16T20:15:01.8806627Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_html_e.c -o cmark/houdini_html_e.o 2021-05-16T20:15:01.9212673Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_html_u.c -o cmark/houdini_html_u.o 2021-05-16T20:15:02.0183105Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/cmark_ctype.c -o cmark/cmark_ctype.o 2021-05-16T20:15:02.0456829Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/arena.c -o cmark/arena.o 2021-05-16T20:15:02.1007648Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/linked_list.c -o cmark/linked_list.o 2021-05-16T20:15:02.1399835Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/plugin.c -o cmark/plugin.o 2021-05-16T20:15:02.1749825Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/registry.c -o cmark/registry.o 2021-05-16T20:15:02.2203930Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/syntax_extension.c -o cmark/syntax_extension.o 2021-05-16T20:15:02.2823833Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/plaintext.c -o cmark/plaintext.o 2021-05-16T20:15:02.3730987Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/footnotes.c -o cmark/footnotes.o 2021-05-16T20:15:02.4144304Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/map.c -o cmark/map.o 2021-05-16T20:15:02.4826062Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/autolink.c -o extensions/autolink.o 2021-05-16T20:15:02.6423462Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/core-extensions.c -o extensions/core-extensions.o 2021-05-16T20:15:02.6716389Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/ext_scanners.c -o extensions/ext_scanners.o 2021-05-16T20:15:02.8014005Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/strikethrough.c -o extensions/strikethrough.o 2021-05-16T20:15:02.8762265Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/table.c -o extensions/table.o 2021-05-16T20:15:03.1281497Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/tagfilter.c -o extensions/tagfilter.o 2021-05-16T20:15:03.1772663Z ar rcs cmark/libstatcmark.a cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o 2021-05-16T20:15:03.1890727Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o commonmark.so extensions.o init.o wrapper.o -Lcmark -lstatcmark -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:15:03.2298470Z installing to /home/runner/work/_temp/Library/00LOCK-commonmark/00new/commonmark/libs 2021-05-16T20:15:03.2362027Z ** R 2021-05-16T20:15:03.2387426Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:15:03.4579588Z ** help 2021-05-16T20:15:03.4697653Z *** installing help indices 2021-05-16T20:15:03.4852003Z ** building package indices 2021-05-16T20:15:03.6647589Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:15:03.8366016Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:15:03.8554706Z ** testing if installed package can be loaded from final location 2021-05-16T20:15:04.0213110Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:15:04.0218964Z * DONE (commonmark) 2021-05-16T20:15:04.2577839Z * installing *source* package ‘brew’ ... 2021-05-16T20:15:04.2579633Z ** using staged installation 2021-05-16T20:15:04.2657315Z ** R 2021-05-16T20:15:04.2684170Z ** inst 2021-05-16T20:15:04.2709413Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:15:04.5931070Z ** help 2021-05-16T20:15:04.6069571Z *** installing help indices 2021-05-16T20:15:04.6232983Z ** building package indices 2021-05-16T20:15:04.8046508Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:15:04.9717257Z ** testing if installed package can be loaded from final location 2021-05-16T20:15:05.1400224Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:15:05.1408572Z * DONE (brew) 2021-05-16T20:15:05.3524438Z * installing *source* package ‘sessioninfo’ ... 2021-05-16T20:15:05.3538182Z ** package ‘sessioninfo’ successfully unpacked and MD5 sums checked 2021-05-16T20:15:05.3539184Z ** using staged installation 2021-05-16T20:15:05.3705865Z ** R 2021-05-16T20:15:05.3745264Z ** inst 2021-05-16T20:15:05.3751474Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:15:05.7773209Z ** help 2021-05-16T20:15:05.7911168Z *** installing help indices 2021-05-16T20:15:05.8082965Z ** building package indices 2021-05-16T20:15:05.9889791Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:15:06.2010578Z ** testing if installed package can be loaded from final location 2021-05-16T20:15:06.4146445Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:15:06.4152176Z * DONE (sessioninfo) 2021-05-16T20:15:06.6141247Z * installing *source* package ‘prettyunits’ ... 2021-05-16T20:15:06.6155771Z ** package ‘prettyunits’ successfully unpacked and MD5 sums checked 2021-05-16T20:15:06.6158908Z ** using staged installation 2021-05-16T20:15:06.6264391Z ** R 2021-05-16T20:15:06.6303814Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:15:06.9203238Z ** help 2021-05-16T20:15:06.9460162Z *** installing help indices 2021-05-16T20:15:06.9654077Z ** building package indices 2021-05-16T20:15:07.1514219Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:15:07.3166727Z ** testing if installed package can be loaded from final location 2021-05-16T20:15:07.4786814Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:15:07.4792248Z * DONE (prettyunits) 2021-05-16T20:15:07.9740293Z * installing *source* package ‘vctrs’ ... 2021-05-16T20:15:07.9878330Z ** package ‘vctrs’ successfully unpacked and MD5 sums checked 2021-05-16T20:15:07.9880626Z ** using staged installation 2021-05-16T20:15:08.0046649Z ** libs 2021-05-16T20:15:08.0115581Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c altrep-rle.c -o altrep-rle.o 2021-05-16T20:15:08.1213864Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c arg-counter.c -o arg-counter.o 2021-05-16T20:15:08.2032686Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c arg.c -o arg.o 2021-05-16T20:15:08.2846730Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c bind.c -o bind.o 2021-05-16T20:15:08.5137056Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c c-unchop.c -o c-unchop.o 2021-05-16T20:15:08.6241294Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c c.c -o c.o 2021-05-16T20:15:08.7543575Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c callables.c -o callables.o 2021-05-16T20:15:08.8126988Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast-bare.c -o cast-bare.o 2021-05-16T20:15:08.9111124Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast-dispatch.c -o cast-dispatch.o 2021-05-16T20:15:08.9792575Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast.c -o cast.o 2021-05-16T20:15:09.1020520Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c compare.c -o compare.o 2021-05-16T20:15:09.2908198Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c complete.c -o complete.o 2021-05-16T20:15:09.4030749Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c conditions.c -o conditions.o 2021-05-16T20:15:09.4827709Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dictionary.c -o dictionary.o 2021-05-16T20:15:09.7138413Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dim.c -o dim.o 2021-05-16T20:15:09.7706836Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c equal.c -o equal.o 2021-05-16T20:15:10.1333244Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fields.c -o fields.o 2021-05-16T20:15:10.2177899Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fill.c -o fill.o 2021-05-16T20:15:10.3312163Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c group.c -o group.o 2021-05-16T20:15:10.4437316Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c growable.c -o growable.o 2021-05-16T20:15:10.4971911Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hash.c -o hash.o 2021-05-16T20:15:10.7111665Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:15:10.7681929Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c names.c -o names.o 2021-05-16T20:15:11.0588520Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-groups.c -o order-groups.o 2021-05-16T20:15:11.1263736Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-radix.c -o order-radix.o 2021-05-16T20:15:11.7912636Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-sortedness.c -o order-sortedness.o 2021-05-16T20:15:11.9334884Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-transform.c -o order-transform.o 2021-05-16T20:15:11.9990025Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-truelength.c -o order-truelength.o 2021-05-16T20:15:12.0663310Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c poly-op.c -o poly-op.o 2021-05-16T20:15:12.2140958Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c proxy-restore.c -o proxy-restore.o 2021-05-16T20:15:12.3148012Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c proxy.c -o proxy.o 2021-05-16T20:15:13.3182311Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ptype2-dispatch.c -o ptype2-dispatch.o 2021-05-16T20:15:13.3184536Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rep.c -o rep.o 2021-05-16T20:15:13.3186268Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c runs.c -o runs.o 2021-05-16T20:15:13.3187961Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c shape.c -o shape.o 2021-05-16T20:15:13.3189820Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size-common.c -o size-common.o 2021-05-16T20:15:13.3191599Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size.c -o size.o 2021-05-16T20:15:13.3193392Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-array.c -o slice-array.o 2021-05-16T20:15:13.5862738Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-assign-array.c -o slice-assign-array.o 2021-05-16T20:15:13.9178837Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-assign.c -o slice-assign.o 2021-05-16T20:15:14.1455848Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-chop.c -o slice-chop.o 2021-05-16T20:15:14.3046446Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice.c -o slice.o 2021-05-16T20:15:14.5636060Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c split.c -o split.o 2021-05-16T20:15:14.6145820Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c subscript-loc.c -o subscript-loc.o 2021-05-16T20:15:14.7969930Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c subscript.c -o subscript.o 2021-05-16T20:15:14.9327290Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c translate.c -o translate.o 2021-05-16T20:15:15.0320868Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-data-frame.c -o type-data-frame.o 2021-05-16T20:15:15.3601506Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-date-time.c -o type-date-time.o 2021-05-16T20:15:15.5050816Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-factor.c -o type-factor.o 2021-05-16T20:15:15.6267214Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-info.c -o type-info.o 2021-05-16T20:15:15.7212068Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-tibble.c -o type-tibble.o 2021-05-16T20:15:15.7890941Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type.c -o type.o 2021-05-16T20:15:15.9039989Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type2.c -o type2.o 2021-05-16T20:15:16.0254941Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typeof2-s3.c -o typeof2-s3.o 2021-05-16T20:15:16.1391668Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typeof2.c -o typeof2.o 2021-05-16T20:15:16.2335487Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c unspecified.c -o unspecified.o 2021-05-16T20:15:16.3013736Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils-dispatch.c -o utils-dispatch.o 2021-05-16T20:15:16.3687240Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils-rlang.c -o utils-rlang.o 2021-05-16T20:15:16.4186065Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T20:15:17.0099178Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-16T20:15:17.0484446Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o vctrs.so altrep-rle.o arg-counter.o arg.o bind.o c-unchop.o c.o callables.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o equal.o fields.o fill.o group.o growable.o hash.o init.o names.o order-groups.o order-radix.o order-sortedness.o order-transform.o order-truelength.o poly-op.o proxy-restore.o proxy.o ptype2-dispatch.o rep.o runs.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-tibble.o type.o type2.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils-rlang.o utils.o version.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:15:17.1054913Z installing to /home/runner/work/_temp/Library/00LOCK-vctrs/00new/vctrs/libs 2021-05-16T20:15:17.1072163Z ** R 2021-05-16T20:15:17.1401328Z ** inst 2021-05-16T20:15:17.1420686Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:15:19.5528025Z ** help 2021-05-16T20:15:19.7939400Z *** installing help indices 2021-05-16T20:15:19.9627922Z *** copying figures 2021-05-16T20:15:19.9636749Z ** building package indices 2021-05-16T20:15:20.2721349Z ** installing vignettes 2021-05-16T20:15:20.2905405Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:15:20.5102184Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:15:20.5291118Z ** testing if installed package can be loaded from final location 2021-05-16T20:15:20.7950640Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:15:20.7983829Z * DONE (vctrs) 2021-05-16T20:15:21.0705501Z * installing *source* package ‘processx’ ... 2021-05-16T20:15:21.0739801Z ** package ‘processx’ successfully unpacked and MD5 sums checked 2021-05-16T20:15:21.0741647Z ** using staged installation 2021-05-16T20:15:21.0901328Z ** libs 2021-05-16T20:15:21.0952476Z gcc -g -O2 -L/usr/local/lib -Wall tools/px.c -o tools/px 2021-05-16T20:15:21.2251160Z gcc -g -O2 -L/usr/local/lib supervisor/supervisor.c \ 2021-05-16T20:15:21.2253277Z supervisor/utils.c -o supervisor/supervisor 2021-05-16T20:15:21.3876743Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T20:15:21.4674924Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c client.c -o client.o 2021-05-16T20:15:21.5556432Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c errors.c -o errors.o 2021-05-16T20:15:21.6112806Z gcc -shared -L"/opt/R/devel/lib/R/lib" -L/usr/local/lib -o client.so base64.o client.o errors.o \ 2021-05-16T20:15:21.6114200Z -L"/opt/R/devel/lib/R/lib" -lR 2021-05-16T20:15:21.6327979Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:15:21.7074530Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c poll.c -o poll.o 2021-05-16T20:15:21.8039651Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c processx-connection.c -o processx-connection.o 2021-05-16T20:15:22.1231301Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c processx-vector.c -o processx-vector.o 2021-05-16T20:15:22.2073030Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c create-time.c -o create-time.o 2021-05-16T20:15:22.3135153Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/childlist.c -o unix/childlist.o 2021-05-16T20:15:22.4026281Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/connection.c -o unix/connection.o 2021-05-16T20:15:22.4738605Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/processx.c -o unix/processx.o 2021-05-16T20:15:22.7771241Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/sigchld.c -o unix/sigchld.o 2021-05-16T20:15:22.8694089Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/utils.c -o unix/utils.o 2021-05-16T20:15:22.9694013Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/named_pipe.c -o unix/named_pipe.o 2021-05-16T20:15:23.0217341Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cleancall.c -o cleancall.o 2021-05-16T20:15:23.0915745Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o processx.so init.o poll.o errors.o processx-connection.o processx-vector.o create-time.o base64.o unix/childlist.o unix/connection.o unix/processx.o unix/sigchld.o unix/utils.o unix/named_pipe.o cleancall.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:15:23.1215134Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-processx/00new/processx 2021-05-16T20:15:23.1223121Z ** R 2021-05-16T20:15:23.1354738Z ** inst 2021-05-16T20:15:23.1362633Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:15:24.6404054Z ** help 2021-05-16T20:15:24.7118250Z *** installing help indices 2021-05-16T20:15:24.7508845Z ** building package indices 2021-05-16T20:15:24.9624062Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:15:25.1466492Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:15:25.1721941Z ** testing if installed package can be loaded from final location 2021-05-16T20:15:25.3771631Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:15:25.3788363Z * DONE (processx) 2021-05-16T20:15:25.6196421Z * installing *source* package ‘markdown’ ... 2021-05-16T20:15:25.6219937Z ** package ‘markdown’ successfully unpacked and MD5 sums checked 2021-05-16T20:15:25.6221145Z ** using staged installation 2021-05-16T20:15:25.6359958Z ** libs 2021-05-16T20:15:25.6409804Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rbase64.c -o Rbase64.o 2021-05-16T20:15:25.7027662Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rinit.c -o Rinit.o 2021-05-16T20:15:25.7496282Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rmarkdown.c -o Rmarkdown.o 2021-05-16T20:15:25.9098718Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c autolink.c -o autolink.o 2021-05-16T20:15:26.0091423Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c buffer.c -o buffer.o 2021-05-16T20:15:26.0788561Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_href_e.c -o houdini_href_e.o 2021-05-16T20:15:26.1165559Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_html_e.c -o houdini_html_e.o 2021-05-16T20:15:26.1538598Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html.c -o html.o 2021-05-16T20:15:26.3573641Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html_smartypants.c -o html_smartypants.o 2021-05-16T20:15:26.4862269Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c markdown.c -o markdown.o 2021-05-16T20:15:27.4998706Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stack.c -o stack.o 2021-05-16T20:15:27.5463109Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o markdown.so Rbase64.o Rinit.o Rmarkdown.o autolink.o buffer.o houdini_href_e.o houdini_html_e.o html.o html_smartypants.o markdown.o stack.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:15:27.5717576Z installing to /home/runner/work/_temp/Library/00LOCK-markdown/00new/markdown/libs 2021-05-16T20:15:27.5734098Z ** R 2021-05-16T20:15:27.5787203Z ** inst 2021-05-16T20:15:27.5805264Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:15:27.9770785Z ** help 2021-05-16T20:15:28.0127478Z *** installing help indices 2021-05-16T20:15:28.0378498Z ** building package indices 2021-05-16T20:15:28.2260867Z ** installing vignettes 2021-05-16T20:15:28.2315681Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:15:28.4014477Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:15:28.4194405Z ** testing if installed package can be loaded from final location 2021-05-16T20:15:28.5879862Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:15:28.5889331Z * DONE (markdown) 2021-05-16T20:15:28.7940705Z * installing *source* package ‘highr’ ... 2021-05-16T20:15:28.7951656Z ** package ‘highr’ successfully unpacked and MD5 sums checked 2021-05-16T20:15:28.7952927Z ** using staged installation 2021-05-16T20:15:28.8098184Z ** R 2021-05-16T20:15:28.8132633Z ** inst 2021-05-16T20:15:28.8143452Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:15:29.1317537Z ** help 2021-05-16T20:15:29.1437176Z *** installing help indices 2021-05-16T20:15:29.1589372Z ** building package indices 2021-05-16T20:15:29.3366861Z ** installing vignettes 2021-05-16T20:15:29.3417674Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:15:29.5055954Z ** testing if installed package can be loaded from final location 2021-05-16T20:15:29.6707184Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:15:29.6714487Z * DONE (highr) 2021-05-16T20:15:29.9378667Z * installing *source* package ‘stringr’ ... 2021-05-16T20:15:29.9410979Z ** package ‘stringr’ successfully unpacked and MD5 sums checked 2021-05-16T20:15:29.9413079Z ** using staged installation 2021-05-16T20:15:29.9571185Z ** R 2021-05-16T20:15:29.9645080Z ** data 2021-05-16T20:15:29.9648661Z *** moving datasets to lazyload DB 2021-05-16T20:15:29.9814169Z ** inst 2021-05-16T20:15:29.9827458Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:15:30.4613247Z ** help 2021-05-16T20:15:30.5344470Z *** installing help indices 2021-05-16T20:15:30.5885320Z *** copying figures 2021-05-16T20:15:30.5887055Z ** building package indices 2021-05-16T20:15:30.8091112Z ** installing vignettes 2021-05-16T20:15:30.8148775Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:15:30.9933373Z ** testing if installed package can be loaded from final location 2021-05-16T20:15:31.1745377Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:15:31.1754317Z * DONE (stringr) 2021-05-16T20:15:31.3804902Z * installing *source* package ‘rversions’ ... 2021-05-16T20:15:31.3816186Z ** package ‘rversions’ successfully unpacked and MD5 sums checked 2021-05-16T20:15:31.3817249Z ** using staged installation 2021-05-16T20:15:31.3953130Z ** R 2021-05-16T20:15:31.3987886Z ** inst 2021-05-16T20:15:31.3995114Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:15:31.7013161Z ** help 2021-05-16T20:15:31.7179054Z *** installing help indices 2021-05-16T20:15:31.7375594Z *** copying figures 2021-05-16T20:15:31.7378531Z ** building package indices 2021-05-16T20:15:31.9229221Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:15:32.1122260Z ** testing if installed package can be loaded from final location 2021-05-16T20:15:32.3036338Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:15:32.3042793Z * DONE (rversions) 2021-05-16T20:15:32.6905507Z * installing *source* package ‘pillar’ ... 2021-05-16T20:15:32.7003339Z ** package ‘pillar’ successfully unpacked and MD5 sums checked 2021-05-16T20:15:32.7004514Z ** using staged installation 2021-05-16T20:15:32.7176290Z ** R 2021-05-16T20:15:32.7343511Z ** inst 2021-05-16T20:15:32.7375396Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:15:34.2986983Z ** help 2021-05-16T20:15:34.3775793Z *** installing help indices 2021-05-16T20:15:34.4333922Z *** copying figures 2021-05-16T20:15:34.4338961Z ** building package indices 2021-05-16T20:15:34.6574439Z ** installing vignettes 2021-05-16T20:15:34.6659589Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:15:34.9344157Z ** testing if installed package can be loaded from final location 2021-05-16T20:15:35.2338357Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:15:35.2360648Z * DONE (pillar) 2021-05-16T20:15:35.4856470Z * installing *source* package ‘callr’ ... 2021-05-16T20:15:35.4883746Z ** package ‘callr’ successfully unpacked and MD5 sums checked 2021-05-16T20:15:35.4884912Z ** using staged installation 2021-05-16T20:15:35.5013085Z ** R 2021-05-16T20:15:35.5139535Z ** inst 2021-05-16T20:15:35.5146035Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:15:38.4083036Z ** help 2021-05-16T20:15:38.5251700Z *** installing help indices 2021-05-16T20:15:38.5957388Z ** building package indices 2021-05-16T20:15:38.8412347Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:15:39.0318707Z ** testing if installed package can be loaded from final location 2021-05-16T20:15:39.2785357Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:15:39.2816479Z * DONE (callr) 2021-05-16T20:15:39.7152979Z * installing *source* package ‘knitr’ ... 2021-05-16T20:15:39.7259957Z ** package ‘knitr’ successfully unpacked and MD5 sums checked 2021-05-16T20:15:39.7261985Z ** using staged installation 2021-05-16T20:15:39.7589248Z ** R 2021-05-16T20:15:39.7944859Z ** demo 2021-05-16T20:15:39.7950363Z ** inst 2021-05-16T20:15:39.8048549Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:15:43.4857586Z ** help 2021-05-16T20:15:43.6658467Z *** installing help indices 2021-05-16T20:15:43.7761170Z ** building package indices 2021-05-16T20:15:44.0513342Z ** installing vignettes 2021-05-16T20:15:44.0601768Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:15:44.2469106Z ** testing if installed package can be loaded from final location 2021-05-16T20:15:44.5150291Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:15:44.5198367Z * DONE (knitr) 2021-05-16T20:15:44.7197552Z * installing *source* package ‘xopen’ ... 2021-05-16T20:15:44.7205435Z ** package ‘xopen’ successfully unpacked and MD5 sums checked 2021-05-16T20:15:44.7206402Z ** using staged installation 2021-05-16T20:15:44.7346201Z ** R 2021-05-16T20:15:44.7369399Z ** inst 2021-05-16T20:15:44.7376499Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:15:44.9659560Z ** help 2021-05-16T20:15:44.9774097Z *** installing help indices 2021-05-16T20:15:44.9985254Z ** building package indices 2021-05-16T20:15:45.1752166Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:15:45.3404316Z ** testing if installed package can be loaded from final location 2021-05-16T20:15:45.5037633Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:15:45.5043412Z * DONE (xopen) 2021-05-16T20:15:45.8912159Z * installing *source* package ‘tibble’ ... 2021-05-16T20:15:45.9004511Z ** package ‘tibble’ successfully unpacked and MD5 sums checked 2021-05-16T20:15:45.9005543Z ** using staged installation 2021-05-16T20:15:45.9196066Z ** libs 2021-05-16T20:15:45.9243088Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c attributes.c -o attributes.o 2021-05-16T20:15:45.9693203Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-05-16T20:15:46.0305095Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:15:46.0658106Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c matrixToDataFrame.c -o matrixToDataFrame.o 2021-05-16T20:15:46.1585859Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:15:46.1814296Z installing to /home/runner/work/_temp/Library/00LOCK-tibble/00new/tibble/libs 2021-05-16T20:15:46.1816455Z ** R 2021-05-16T20:15:46.1973454Z ** inst 2021-05-16T20:15:46.2002589Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:15:47.8121529Z ** help 2021-05-16T20:15:47.8816747Z *** installing help indices 2021-05-16T20:15:47.9284041Z *** copying figures 2021-05-16T20:15:47.9288737Z ** building package indices 2021-05-16T20:15:48.1533209Z ** installing vignettes 2021-05-16T20:15:48.1584345Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:15:48.4860017Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:15:48.5034703Z ** testing if installed package can be loaded from final location 2021-05-16T20:15:48.8481978Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:15:48.8503023Z * DONE (tibble) 2021-05-16T20:15:49.0858002Z * installing *source* package ‘pkgbuild’ ... 2021-05-16T20:15:49.0878234Z ** package ‘pkgbuild’ successfully unpacked and MD5 sums checked 2021-05-16T20:15:49.0879384Z ** using staged installation 2021-05-16T20:15:49.1016884Z ** R 2021-05-16T20:15:49.1094034Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:15:50.1781297Z ** help 2021-05-16T20:15:50.2129203Z *** installing help indices 2021-05-16T20:15:50.2469594Z ** building package indices 2021-05-16T20:15:50.4451357Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:15:50.6885807Z ** testing if installed package can be loaded from final location 2021-05-16T20:15:50.9428369Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:15:50.9440772Z * DONE (pkgbuild) 2021-05-16T20:15:51.3075898Z * installing *source* package ‘roxygen2’ ... 2021-05-16T20:15:51.3145156Z ** package ‘roxygen2’ successfully unpacked and MD5 sums checked 2021-05-16T20:15:51.3146335Z ** using staged installation 2021-05-16T20:15:51.3328189Z ** libs 2021-05-16T20:15:51.3382926Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-16T20:15:55.6262261Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c escapeExamples.cpp -o escapeExamples.o 2021-05-16T20:15:58.4244262Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c isComplete.cpp -o isComplete.o 2021-05-16T20:16:01.2527996Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c leadingSpaces.cpp -o leadingSpaces.o 2021-05-16T20:16:04.0990118Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c parser2.cpp -o parser2.o 2021-05-16T20:16:08.6105337Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c wrapUsage.cpp -o wrapUsage.o 2021-05-16T20:16:11.5818340Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o roxygen2.so RcppExports.o escapeExamples.o isComplete.o leadingSpaces.o parser2.o wrapUsage.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:16:11.6727602Z installing to /home/runner/work/_temp/Library/00LOCK-roxygen2/00new/roxygen2/libs 2021-05-16T20:16:11.6768646Z ** R 2021-05-16T20:16:11.7051550Z ** inst 2021-05-16T20:16:11.7068690Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:16:15.2992706Z ** help 2021-05-16T20:16:15.3676479Z *** installing help indices 2021-05-16T20:16:15.4151556Z *** copying figures 2021-05-16T20:16:15.4153777Z ** building package indices 2021-05-16T20:16:15.6328477Z ** installing vignettes 2021-05-16T20:16:15.6423024Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:16:15.9679635Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:16:15.9872814Z ** testing if installed package can be loaded from final location 2021-05-16T20:16:16.3733797Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:16:16.3775700Z * DONE (roxygen2) 2021-05-16T20:16:16.5861969Z * installing *source* package ‘rematch2’ ... 2021-05-16T20:16:16.5873946Z ** package ‘rematch2’ successfully unpacked and MD5 sums checked 2021-05-16T20:16:16.5876046Z ** using staged installation 2021-05-16T20:16:16.6004584Z ** R 2021-05-16T20:16:16.6043682Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:16:17.0573166Z ** help 2021-05-16T20:16:17.0858955Z *** installing help indices 2021-05-16T20:16:17.1063868Z ** building package indices 2021-05-16T20:16:17.2941658Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:16:17.6169167Z ** testing if installed package can be loaded from final location 2021-05-16T20:16:17.9396270Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:16:17.9402841Z * DONE (rematch2) 2021-05-16T20:16:18.1840391Z * installing *source* package ‘rcmdcheck’ ... 2021-05-16T20:16:18.1863272Z ** package ‘rcmdcheck’ successfully unpacked and MD5 sums checked 2021-05-16T20:16:18.1864460Z ** using staged installation 2021-05-16T20:16:18.1991564Z ** R 2021-05-16T20:16:18.2062342Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:16:19.3018076Z ** help 2021-05-16T20:16:19.3356770Z *** installing help indices 2021-05-16T20:16:19.3631148Z ** building package indices 2021-05-16T20:16:19.5620628Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:16:19.8257105Z ** testing if installed package can be loaded from final location 2021-05-16T20:16:20.1021576Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:16:20.1034552Z * DONE (rcmdcheck) 2021-05-16T20:16:20.8349106Z * installing *source* package ‘waldo’ ... 2021-05-16T20:16:20.8351820Z ** package ‘waldo’ successfully unpacked and MD5 sums checked 2021-05-16T20:16:20.8352859Z ** using staged installation 2021-05-16T20:16:20.8353441Z ** R 2021-05-16T20:16:20.8354406Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:16:21.0013205Z ** help 2021-05-16T20:16:21.0135411Z *** installing help indices 2021-05-16T20:16:21.0305002Z *** copying figures 2021-05-16T20:16:21.0307228Z ** building package indices 2021-05-16T20:16:21.2115278Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:16:21.4409664Z ** testing if installed package can be loaded from final location 2021-05-16T20:16:21.6716625Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:16:21.6726083Z * DONE (waldo) 2021-05-16T20:16:22.1400465Z * installing *source* package ‘testthat’ ... 2021-05-16T20:16:22.1518132Z ** package ‘testthat’ successfully unpacked and MD5 sums checked 2021-05-16T20:16:22.1520598Z ** using staged installation 2021-05-16T20:16:22.1727362Z ** libs 2021-05-16T20:16:22.1775729Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:16:22.2213879Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o 2021-05-16T20:16:22.2692552Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-catch.cpp -o test-catch.o 2021-05-16T20:16:22.9959977Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-example.cpp -o test-example.o 2021-05-16T20:16:23.5718759Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-runner.cpp -o test-runner.o 2021-05-16T20:16:39.2377300Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o testthat.so init.o reassign.o test-catch.o test-example.o test-runner.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:16:39.3931615Z installing to /home/runner/work/_temp/Library/00LOCK-testthat/00new/testthat/libs 2021-05-16T20:16:39.4030676Z ** R 2021-05-16T20:16:39.4364518Z ** inst 2021-05-16T20:16:39.4395391Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:16:48.3731290Z ** help 2021-05-16T20:16:48.5764124Z *** installing help indices 2021-05-16T20:16:48.7382981Z *** copying figures 2021-05-16T20:16:48.7387637Z ** building package indices 2021-05-16T20:16:49.0395226Z ** installing vignettes 2021-05-16T20:16:49.0511255Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:16:49.2521225Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:16:49.2742005Z ** testing if installed package can be loaded from final location 2021-05-16T20:16:49.6889152Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:16:49.6973669Z * DONE (testthat) 2021-05-16T20:16:50.0395682Z * installing *source* package ‘devtools’ ... 2021-05-16T20:16:50.0449339Z ** package ‘devtools’ successfully unpacked and MD5 sums checked 2021-05-16T20:16:50.0450389Z ** using staged installation 2021-05-16T20:16:50.0721033Z ** R 2021-05-16T20:16:50.0847101Z ** inst 2021-05-16T20:16:50.0858728Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:16:51.6834200Z ** help 2021-05-16T20:16:51.7883872Z *** installing help indices 2021-05-16T20:16:51.8580684Z *** copying figures 2021-05-16T20:16:51.8582297Z ** building package indices 2021-05-16T20:16:52.1013220Z ** installing vignettes 2021-05-16T20:16:52.1058306Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:16:52.7126895Z ** testing if installed package can be loaded from final location 2021-05-16T20:16:53.3928617Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:16:53.3950318Z * DONE (devtools) 2021-05-16T20:16:53.4068672Z 2021-05-16T20:16:53.4069794Z The downloaded source packages are in 2021-05-16T20:16:53.4071236Z ‘/tmp/RtmpyKXx5D/downloaded_packages’ 2021-05-16T20:16:53.5057617Z Downloading GitHub repo muschellij2/desc@HEAD 2021-05-16T20:16:54.1905396Z 2021-05-16T20:16:54.4602212Z 2021-05-16T20:16:54.4604451Z checking for file ‘/tmp/RtmpyKXx5D/remotes72cf6e90db48/muschellij2-desc-7be86f2/DESCRIPTION’ ... 2021-05-16T20:16:54.4649742Z 2021-05-16T20:16:54.4651618Z ✔ checking for file ‘/tmp/RtmpyKXx5D/remotes72cf6e90db48/muschellij2-desc-7be86f2/DESCRIPTION’ 2021-05-16T20:16:54.4725949Z 2021-05-16T20:16:54.4726711Z 2021-05-16T20:16:54.4727486Z ─ preparing ‘desc’: 2021-05-16T20:16:54.4727778Z 2021-05-16T20:16:54.4728073Z 2021-05-16T20:16:54.4849036Z checking DESCRIPTION meta-information ... 2021-05-16T20:16:54.4850195Z 2021-05-16T20:16:54.4851141Z ✔ checking DESCRIPTION meta-information 2021-05-16T20:16:54.5575444Z 2021-05-16T20:16:54.5575991Z 2021-05-16T20:16:54.5577362Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-16T20:16:54.5577892Z 2021-05-16T20:16:54.5628296Z 2021-05-16T20:16:54.5630347Z ─ checking for empty or unneeded directories 2021-05-16T20:16:54.5633034Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-16T20:16:54.5639708Z 2021-05-16T20:16:54.5657892Z 2021-05-16T20:16:54.5659692Z ─ building ‘desc_1.2.0.9000.tar.gz’ 2021-05-16T20:16:54.6615821Z 2021-05-16T20:16:54.6618541Z 2021-05-16T20:16:54.6619984Z 2021-05-16T20:16:54.6718054Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:16:54.6719191Z (as ‘lib’ is unspecified) 2021-05-16T20:16:54.9550406Z * installing *source* package ‘desc’ ... 2021-05-16T20:16:54.9580844Z ** using staged installation 2021-05-16T20:16:54.9743849Z ** R 2021-05-16T20:16:54.9864178Z ** inst 2021-05-16T20:16:54.9879094Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:16:56.3775544Z ** help 2021-05-16T20:16:56.4988993Z *** installing help indices 2021-05-16T20:16:56.5799219Z ** building package indices 2021-05-16T20:16:56.8337760Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:16:57.0075194Z ** testing if installed package can be loaded from final location 2021-05-16T20:16:57.2108188Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:16:57.2125107Z * DONE (desc) 2021-05-16T20:16:57.3989018Z 2021-05-16T20:16:57.3990098Z 2021-05-16T20:16:57.4001696Z checking for file ‘/tmp/RtmpyKXx5D/remotes72cf1e6313/muschellij2-ghtravis-0b26809/DESCRIPTION’ ... 2021-05-16T20:16:57.4016030Z 2021-05-16T20:16:57.4017774Z ✔ checking for file ‘/tmp/RtmpyKXx5D/remotes72cf1e6313/muschellij2-ghtravis-0b26809/DESCRIPTION’ 2021-05-16T20:16:57.4092878Z 2021-05-16T20:16:58.3445441Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:16:58.3446080Z 2021-05-16T20:16:58.3449234Z (as ‘lib’ is unspecified) 2021-05-16T20:16:58.3449964Z ─ preparing ‘ghtravis’: 2021-05-16T20:16:58.3451245Z * installing *source* package ‘ghtravis’ ... 2021-05-16T20:16:58.3451654Z 2021-05-16T20:16:58.3453220Z ** using staged installation 2021-05-16T20:16:58.3453670Z 2021-05-16T20:16:58.3454750Z ** R 2021-05-16T20:16:58.3575385Z checking DESCRIPTION meta-information ... 2021-05-16T20:16:58.3618849Z ** inst 2021-05-16T20:16:58.3637512Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:16:58.3638060Z 2021-05-16T20:16:58.3638743Z ✔ checking DESCRIPTION meta-information 2021-05-16T20:16:58.3639123Z 2021-05-16T20:16:58.3639399Z 2021-05-16T20:16:58.3640178Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-16T20:16:58.3640617Z 2021-05-16T20:16:58.3640883Z 2021-05-16T20:16:58.3641517Z ─ checking for empty or unneeded directories 2021-05-16T20:16:58.3642287Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-16T20:16:58.3642616Z 2021-05-16T20:16:58.3642908Z 2021-05-16T20:16:58.3643473Z ─ building ‘ghtravis_0.15.1.tar.gz’ 2021-05-16T20:16:58.3643783Z 2021-05-16T20:16:58.3644063Z 2021-05-16T20:16:58.3644330Z 2021-05-16T20:16:58.9043616Z ** help 2021-05-16T20:16:58.9590610Z *** installing help indices 2021-05-16T20:16:58.9995103Z ** building package indices 2021-05-16T20:16:59.2174462Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:16:59.8380333Z ** testing if installed package can be loaded from final location 2021-05-16T20:17:00.4852620Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:17:00.4861881Z * DONE (ghtravis) 2021-05-16T20:17:00.4946041Z Using github PAT from envvar GITHUB_PAT 2021-05-16T20:17:00.6436238Z Downloading GitHub repo muschellij2/aghast@HEAD 2021-05-16T20:17:01.5833592Z 2021-05-16T20:17:01.5835610Z tidyselect (NA -> 1.1.1) [CRAN] 2021-05-16T20:17:01.5836754Z Installing 5 packages: tidyselect, generics, cpp11, dplyr, tidyr 2021-05-16T20:17:01.5838194Z generics (NA -> 0.1.0) [CRAN] 2021-05-16T20:17:01.5839097Z cpp11 (NA -> 0.2.7) [CRAN] 2021-05-16T20:17:01.5839989Z dplyr (NA -> 1.0.6) [CRAN] 2021-05-16T20:17:01.5840853Z tidyr (NA -> 1.1.3) [CRAN] 2021-05-16T20:17:01.5844538Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:17:01.5845622Z (as ‘lib’ is unspecified) 2021-05-16T20:17:15.0239189Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyselect_1.1.1.tar.gz' 2021-05-16T20:17:15.2936912Z Content type 'binary/octet-stream' length 92124 bytes (89 KB) 2021-05-16T20:17:15.3012777Z ================================================== 2021-05-16T20:17:15.3013313Z downloaded 89 KB 2021-05-16T20:17:15.3014892Z 2021-05-16T20:17:15.3050151Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/generics_0.1.0.tar.gz' 2021-05-16T20:17:15.8418084Z Content type 'binary/octet-stream' length 118869 bytes (116 KB) 2021-05-16T20:17:15.8522149Z ================================================== 2021-05-16T20:17:15.8522639Z downloaded 116 KB 2021-05-16T20:17:15.8522910Z 2021-05-16T20:17:15.8618913Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cpp11_0.2.7.tar.gz' 2021-05-16T20:17:16.6012018Z Content type 'binary/octet-stream' length 200157 bytes (195 KB) 2021-05-16T20:17:16.6156689Z ================================================== 2021-05-16T20:17:16.6157319Z downloaded 195 KB 2021-05-16T20:17:16.6157630Z 2021-05-16T20:17:16.6196247Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/dplyr_1.0.6.tar.gz' 2021-05-16T20:17:17.0109599Z Content type 'binary/octet-stream' length 954544 bytes (932 KB) 2021-05-16T20:17:17.0408736Z ================================================== 2021-05-16T20:17:17.0409647Z downloaded 932 KB 2021-05-16T20:17:17.0410178Z 2021-05-16T20:17:17.0445458Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyr_1.1.3.tar.gz' 2021-05-16T20:17:17.4357545Z Content type 'binary/octet-stream' length 706784 bytes (690 KB) 2021-05-16T20:17:17.4581852Z ================================================== 2021-05-16T20:17:17.4582402Z downloaded 690 KB 2021-05-16T20:17:17.4582697Z 2021-05-16T20:17:18.3504292Z * installing *source* package ‘tidyselect’ ... 2021-05-16T20:17:18.3506576Z ** package ‘tidyselect’ successfully unpacked and MD5 sums checked 2021-05-16T20:17:18.3507653Z ** using staged installation 2021-05-16T20:17:18.3508307Z ** R 2021-05-16T20:17:18.3508845Z ** inst 2021-05-16T20:17:18.3509882Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:17:18.6118650Z ** help 2021-05-16T20:17:18.6647828Z *** installing help indices 2021-05-16T20:17:18.7031253Z ** building package indices 2021-05-16T20:17:18.9093210Z ** installing vignettes 2021-05-16T20:17:18.9114716Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:17:19.1499474Z ** testing if installed package can be loaded from final location 2021-05-16T20:17:19.3943920Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:17:19.3954912Z * DONE (tidyselect) 2021-05-16T20:17:19.6527363Z * installing *source* package ‘generics’ ... 2021-05-16T20:17:19.6556904Z ** package ‘generics’ successfully unpacked and MD5 sums checked 2021-05-16T20:17:19.6558157Z ** using staged installation 2021-05-16T20:17:19.6682198Z ** R 2021-05-16T20:17:19.6732075Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:17:19.9613273Z ** help 2021-05-16T20:17:20.0693466Z *** installing help indices 2021-05-16T20:17:20.1113455Z ** building package indices 2021-05-16T20:17:20.3301190Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:17:20.5005889Z ** testing if installed package can be loaded from final location 2021-05-16T20:17:20.6681653Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:17:20.6687900Z * DONE (generics) 2021-05-16T20:17:20.9229873Z * installing *source* package ‘cpp11’ ... 2021-05-16T20:17:20.9262870Z ** package ‘cpp11’ successfully unpacked and MD5 sums checked 2021-05-16T20:17:20.9263915Z ** using staged installation 2021-05-16T20:17:20.9409771Z ** R 2021-05-16T20:17:20.9449486Z ** inst 2021-05-16T20:17:20.9477891Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:17:21.3157494Z ** help 2021-05-16T20:17:21.3357710Z *** installing help indices 2021-05-16T20:17:21.3531448Z ** building package indices 2021-05-16T20:17:21.5319231Z ** installing vignettes 2021-05-16T20:17:21.5376185Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:17:21.7026135Z ** testing if installed package can be loaded from final location 2021-05-16T20:17:21.8686456Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:17:21.8696958Z * DONE (cpp11) 2021-05-16T20:17:22.3374050Z * installing *source* package ‘dplyr’ ... 2021-05-16T20:17:22.3495807Z ** package ‘dplyr’ successfully unpacked and MD5 sums checked 2021-05-16T20:17:22.3497038Z ** using staged installation 2021-05-16T20:17:22.3702467Z ** libs 2021-05-16T20:17:22.3752989Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c chop.cpp -o chop.o 2021-05-16T20:17:22.5060034Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c filter.cpp -o filter.o 2021-05-16T20:17:22.6617976Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c funs.cpp -o funs.o 2021-05-16T20:17:22.7811409Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c group_by.cpp -o group_by.o 2021-05-16T20:17:23.2871381Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c group_data.cpp -o group_data.o 2021-05-16T20:17:23.3888028Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c imports.cpp -o imports.o 2021-05-16T20:17:23.4953726Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.cpp -o init.o 2021-05-16T20:17:23.6037572Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mask.cpp -o mask.o 2021-05-16T20:17:23.7289818Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mutate.cpp -o mutate.o 2021-05-16T20:17:23.8456454Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c slice.cpp -o slice.o 2021-05-16T20:17:23.9340674Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c summarise.cpp -o summarise.o 2021-05-16T20:17:24.0881838Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o dplyr.so chop.o filter.o funs.o group_by.o group_data.o imports.o init.o mask.o mutate.o slice.o summarise.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:17:24.1494416Z installing to /home/runner/work/_temp/Library/00LOCK-dplyr/00new/dplyr/libs 2021-05-16T20:17:24.1503113Z ** R 2021-05-16T20:17:24.1929725Z ** data 2021-05-16T20:17:24.1934332Z *** moving datasets to lazyload DB 2021-05-16T20:17:24.2845109Z ** inst 2021-05-16T20:17:24.2871566Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:17:28.5005357Z ** help 2021-05-16T20:17:28.9415511Z *** installing help indices 2021-05-16T20:17:29.1489925Z *** copying figures 2021-05-16T20:17:29.1495053Z ** building package indices 2021-05-16T20:17:29.4862801Z ** installing vignettes 2021-05-16T20:17:29.4990087Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:17:29.9324626Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:17:29.9495056Z ** testing if installed package can be loaded from final location 2021-05-16T20:17:30.4730591Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:17:30.4776998Z * DONE (dplyr) 2021-05-16T20:17:30.8235647Z * installing *source* package ‘tidyr’ ... 2021-05-16T20:17:30.8307146Z ** package ‘tidyr’ successfully unpacked and MD5 sums checked 2021-05-16T20:17:30.8309352Z ** using staged installation 2021-05-16T20:17:30.8478437Z ** libs 2021-05-16T20:17:30.8537994Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c cpp11.cpp -o cpp11.o 2021-05-16T20:17:31.7660329Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c fill.cpp -o fill.o 2021-05-16T20:17:32.0759389Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c melt.cpp -o melt.o 2021-05-16T20:17:33.6344993Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c simplifyPieces.cpp -o simplifyPieces.o 2021-05-16T20:17:34.8389638Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tidyr.so cpp11.o fill.o melt.o simplifyPieces.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:17:34.9099220Z installing to /home/runner/work/_temp/Library/00LOCK-tidyr/00new/tidyr/libs 2021-05-16T20:17:34.9122505Z ** R 2021-05-16T20:17:34.9272500Z ** data 2021-05-16T20:17:34.9283320Z *** moving datasets to lazyload DB 2021-05-16T20:17:35.1079198Z ** inst 2021-05-16T20:17:35.1100021Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:17:36.5771894Z ** help 2021-05-16T20:17:36.6882045Z *** installing help indices 2021-05-16T20:17:36.7566377Z *** copying figures 2021-05-16T20:17:36.7571449Z ** building package indices 2021-05-16T20:17:36.9973242Z ** installing vignettes 2021-05-16T20:17:37.0066639Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:17:37.4572550Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:17:37.4754291Z ** testing if installed package can be loaded from final location 2021-05-16T20:17:37.9310868Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:17:37.9327856Z * DONE (tidyr) 2021-05-16T20:17:37.9494452Z 2021-05-16T20:17:37.9495235Z The downloaded source packages are in 2021-05-16T20:17:37.9496485Z ‘/tmp/RtmpyKXx5D/downloaded_packages’ 2021-05-16T20:17:38.1203481Z 2021-05-16T20:17:38.1214628Z checking for file ‘/tmp/RtmpyKXx5D/remotes72cf19164153/muschellij2-aghast-0c3b853/DESCRIPTION’ ... 2021-05-16T20:17:38.1239159Z 2021-05-16T20:17:38.1240325Z ✔ checking for file ‘/tmp/RtmpyKXx5D/remotes72cf19164153/muschellij2-aghast-0c3b853/DESCRIPTION’ 2021-05-16T20:17:38.1330135Z 2021-05-16T20:17:38.1330751Z 2021-05-16T20:17:38.1331612Z ─ preparing ‘aghast’: 2021-05-16T20:17:38.1331933Z 2021-05-16T20:17:38.1332381Z 2021-05-16T20:17:38.1414320Z checking DESCRIPTION meta-information ... 2021-05-16T20:17:38.1433804Z 2021-05-16T20:17:38.1434716Z ✔ checking DESCRIPTION meta-information 2021-05-16T20:17:38.1680345Z 2021-05-16T20:17:38.1701353Z 2021-05-16T20:17:38.1702583Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-16T20:17:38.1709206Z 2021-05-16T20:17:38.1726567Z 2021-05-16T20:17:38.1727544Z ─ checking for empty or unneeded directories 2021-05-16T20:17:38.1728912Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-16T20:17:38.1770711Z 2021-05-16T20:17:38.1787676Z 2021-05-16T20:17:38.1788506Z ─ building ‘aghast_0.2.1.tar.gz’ 2021-05-16T20:17:38.1882118Z 2021-05-16T20:17:38.1882800Z 2021-05-16T20:17:38.1883125Z 2021-05-16T20:17:38.1957398Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:17:38.1958433Z (as ‘lib’ is unspecified) 2021-05-16T20:17:38.3965139Z * installing *source* package ‘aghast’ ... 2021-05-16T20:17:38.3970555Z ** using staged installation 2021-05-16T20:17:38.4128897Z ** R 2021-05-16T20:17:38.4182830Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:17:38.8336558Z ** help 2021-05-16T20:17:38.8629891Z *** installing help indices 2021-05-16T20:17:38.8843662Z ** building package indices 2021-05-16T20:17:39.0735283Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:17:39.2445562Z ** testing if installed package can be loaded from final location 2021-05-16T20:17:39.4149439Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:17:39.4156394Z * DONE (aghast) 2021-05-16T20:17:39.4240406Z Installing 1 packages: covr 2021-05-16T20:17:39.4248520Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:17:39.4249302Z (as ‘lib’ is unspecified) 2021-05-16T20:17:52.8470534Z also installing the dependencies ‘lazyeval’, ‘rex’ 2021-05-16T20:17:52.8471709Z 2021-05-16T20:17:52.8476662Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lazyeval_0.2.2.tar.gz' 2021-05-16T20:17:53.8595316Z Content type 'application/x-tar' length 83462 bytes (81 KB) 2021-05-16T20:17:53.8596052Z ================================================== 2021-05-16T20:17:53.8596449Z downloaded 81 KB 2021-05-16T20:17:53.8596713Z 2021-05-16T20:17:53.8597942Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rex_1.2.0.tar.gz' 2021-05-16T20:17:53.8599188Z Content type 'binary/octet-stream' length 91701 bytes (89 KB) 2021-05-16T20:17:53.8599766Z ================================================== 2021-05-16T20:17:53.8600151Z downloaded 89 KB 2021-05-16T20:17:53.8600410Z 2021-05-16T20:17:53.8601552Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/covr_3.5.1.tar.gz' 2021-05-16T20:17:54.2354737Z Content type 'binary/octet-stream' length 147467 bytes (144 KB) 2021-05-16T20:17:54.2474901Z ================================================== 2021-05-16T20:17:54.2476015Z downloaded 144 KB 2021-05-16T20:17:54.2476536Z 2021-05-16T20:17:54.4911997Z * installing *source* package ‘lazyeval’ ... 2021-05-16T20:17:54.4937627Z ** package ‘lazyeval’ successfully unpacked and MD5 sums checked 2021-05-16T20:17:54.4938783Z ** using staged installation 2021-05-16T20:17:54.5055263Z ** libs 2021-05-16T20:17:54.5102758Z 2021-05-16T20:17:54.5104142Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c expr.c -o expr.o 2021-05-16T20:17:54.5676183Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:17:54.6024106Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c interp.c -o interp.o 2021-05-16T20:17:54.6576283Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c lazy.c -o lazy.o 2021-05-16T20:17:54.7278769Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c name.c -o name.o 2021-05-16T20:17:54.7852512Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T20:17:54.8522062Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o lazyeval.so expr.o init.o interp.o lazy.o name.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:17:54.8743332Z installing to /home/runner/work/_temp/Library/00LOCK-lazyeval/00new/lazyeval/libs 2021-05-16T20:17:54.8773215Z ** R 2021-05-16T20:17:54.8821279Z ** inst 2021-05-16T20:17:54.8835915Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:17:55.3478693Z ** help 2021-05-16T20:17:55.4003760Z *** installing help indices 2021-05-16T20:17:55.4433396Z ** building package indices 2021-05-16T20:17:55.6532873Z ** installing vignettes 2021-05-16T20:17:55.6601556Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:17:55.8282143Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:17:55.8454137Z ** testing if installed package can be loaded from final location 2021-05-16T20:17:56.0163011Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:17:56.0170618Z * DONE (lazyeval) 2021-05-16T20:17:56.2563346Z * installing *source* package ‘rex’ ... 2021-05-16T20:17:56.2588953Z ** package ‘rex’ successfully unpacked and MD5 sums checked 2021-05-16T20:17:56.2591820Z ** using staged installation 2021-05-16T20:17:56.2723521Z ** R 2021-05-16T20:17:56.2776834Z ** inst 2021-05-16T20:17:56.2787965Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:17:56.7395892Z ** help 2021-05-16T20:17:56.7895964Z *** installing help indices 2021-05-16T20:17:56.8255817Z ** building package indices 2021-05-16T20:17:57.0311222Z ** installing vignettes 2021-05-16T20:17:57.0367047Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:17:57.2057479Z ** testing if installed package can be loaded from final location 2021-05-16T20:17:57.3781212Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:17:57.3789973Z * DONE (rex) 2021-05-16T20:17:57.7153639Z * installing *source* package ‘covr’ ... 2021-05-16T20:17:57.7208932Z ** package ‘covr’ successfully unpacked and MD5 sums checked 2021-05-16T20:17:57.7210110Z ** using staged installation 2021-05-16T20:17:57.7407165Z ** libs 2021-05-16T20:17:57.7454029Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o 2021-05-16T20:17:57.7973372Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o covr.so reassign.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:17:57.8125454Z installing to /home/runner/work/_temp/Library/00LOCK-covr/00new/covr/libs 2021-05-16T20:17:57.8138125Z ** R 2021-05-16T20:17:57.8267159Z ** inst 2021-05-16T20:17:57.8287737Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:17:59.0401217Z ** help 2021-05-16T20:17:59.0994356Z *** installing help indices 2021-05-16T20:17:59.1446656Z *** copying figures 2021-05-16T20:17:59.1448182Z ** building package indices 2021-05-16T20:17:59.3595535Z ** installing vignettes 2021-05-16T20:17:59.3653179Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:17:59.5526424Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:17:59.5696164Z ** testing if installed package can be loaded from final location 2021-05-16T20:17:59.7744978Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:17:59.7763422Z * DONE (covr) 2021-05-16T20:17:59.7860062Z 2021-05-16T20:17:59.7860779Z The downloaded source packages are in 2021-05-16T20:17:59.7862058Z ‘/tmp/RtmpyKXx5D/downloaded_packages’ 2021-05-16T20:17:59.7988263Z ##[group]Run Rscript -e "tic::before_install()" 2021-05-16T20:17:59.7988855Z Rscript -e "tic::before_install()" 2021-05-16T20:17:59.8031033Z shell: /usr/bin/bash -e {0} 2021-05-16T20:17:59.8031402Z env: 2021-05-16T20:17:59.8031809Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:17:59.8032262Z TIC_DEPLOY_KEY: 2021-05-16T20:17:59.8033013Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:17:59.8034565Z GITHUB_PAT: *** 2021-05-16T20:17:59.8034929Z COVERALLS_TOKEN: 2021-05-16T20:17:59.8035384Z continue-on-error: true 2021-05-16T20:17:59.8035824Z VDIFFR_RUN_TESTS: 2021-05-16T20:17:59.8036266Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:17:59.8036682Z TZ: UTC 2021-05-16T20:17:59.8037030Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:17:59.8037417Z NOT_CRAN: true 2021-05-16T20:17:59.8037754Z ##[endgroup] 2021-05-16T20:18:00.8638833Z Installing RNifti binaries 2021-05-16T20:18:00.8640223Z ✔ Loading tic stage configuration from tic.R 2021-05-16T20:18:00.8641220Z Running before_install: step_install_remote_binaries() 2021-05-16T20:18:00.8647949Z [1] "neuroconductor/RNifti" 2021-05-16T20:18:00.9023778Z OK (HTTP 200).OK (HTTP 200).No Binaries Found, exiting 2021-05-16T20:18:00.9033001Z Installing oro.nifti binaries 2021-05-16T20:18:00.9042112Z [1] "neuroconductor/oro.nifti" 2021-05-16T20:18:01.0386538Z OK (HTTP 200).OK (HTTP 200).No Binaries Found, exiting 2021-05-16T20:18:01.0395484Z Installing brainR binaries 2021-05-16T20:18:01.0404576Z [1] "neuroconductor/brainR" 2021-05-16T20:18:01.1850873Z OK (HTTP 200).OK (HTTP 200).No Binaries Found, exiting 2021-05-16T20:18:01.1975731Z ##[group]Run remotes::install_deps(dependencies = TRUE) 2021-05-16T20:18:01.1976452Z remotes::install_deps(dependencies = TRUE) 2021-05-16T20:18:01.1977039Z remotes::install_cran("rcmdcheck") 2021-05-16T20:18:01.1977549Z remotes::install_cran("markdown") 2021-05-16T20:18:01.1984440Z shell: /usr/local/bin/Rscript {0} 2021-05-16T20:18:01.1984830Z env: 2021-05-16T20:18:01.1985236Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:18:01.1985678Z TIC_DEPLOY_KEY: 2021-05-16T20:18:01.1986449Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:18:01.1987990Z GITHUB_PAT: *** 2021-05-16T20:18:01.1988363Z COVERALLS_TOKEN: 2021-05-16T20:18:01.1988804Z continue-on-error: true 2021-05-16T20:18:01.1989246Z VDIFFR_RUN_TESTS: 2021-05-16T20:18:01.1989683Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:18:01.1990099Z TZ: UTC 2021-05-16T20:18:01.1990448Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:18:01.1990991Z NOT_CRAN: true 2021-05-16T20:18:01.1991338Z ##[endgroup] 2021-05-16T20:18:18.5124291Z RNifti (NA -> 929106d1b...) [GitHub] 2021-05-16T20:18:18.5125899Z oro.nifti (NA -> bd06b05d2...) [GitHub] 2021-05-16T20:18:18.5127032Z brainR (NA -> 30deb9803...) [GitHub] 2021-05-16T20:18:18.5128044Z abind (NA -> 1.4-5 ) [CRAN] 2021-05-16T20:18:18.5128983Z bitops (NA -> 1.0-7 ) [CRAN] 2021-05-16T20:18:18.5129927Z jquerylib (NA -> 0.1.4 ) [CRAN] 2021-05-16T20:18:18.5130840Z sass (NA -> 0.4.0 ) [CRAN] 2021-05-16T20:18:18.5131749Z bslib (NA -> 0.2.5 ) [CRAN] 2021-05-16T20:18:18.5133318Z promises (NA -> 1.2.0.1 ) [CRAN] 2021-05-16T20:18:18.5134244Z later (NA -> 1.2.0 ) [CRAN] 2021-05-16T20:18:18.5135266Z sourcetools (NA -> 0.1.7 ) [CRAN] 2021-05-16T20:18:18.5136742Z xtable (NA -> 1.8-4 ) [CRAN] 2021-05-16T20:18:18.5137406Z httpuv (NA -> 1.6.1 ) [CRAN] 2021-05-16T20:18:18.5138038Z webshot (NA -> 0.5.2 ) [CRAN] 2021-05-16T20:18:18.5138652Z miniUI (NA -> 0.1.1.1 ) [CRAN] 2021-05-16T20:18:18.5139317Z base64enc (NA -> 0.1-3 ) [CRAN] 2021-05-16T20:18:18.5139958Z manipulat... (NA -> 0.10.1 ) [CRAN] 2021-05-16T20:18:18.5140578Z crosstalk (NA -> 1.1.1 ) [CRAN] 2021-05-16T20:18:18.5141178Z shiny (NA -> 1.6.0 ) [CRAN] 2021-05-16T20:18:18.5141770Z htmltools (NA -> 0.5.1.1 ) [CRAN] 2021-05-16T20:18:18.5142403Z htmlwidgets (NA -> 1.5.3 ) [CRAN] 2021-05-16T20:18:18.5143048Z colorspace (NA -> 2.0-1 ) [CRAN] 2021-05-16T20:18:18.5143684Z viridisLite (NA -> 0.4.0 ) [CRAN] 2021-05-16T20:18:18.5144354Z RColorBrewer (NA -> 1.1-2 ) [CRAN] 2021-05-16T20:18:18.5144980Z munsell (NA -> 0.5.0 ) [CRAN] 2021-05-16T20:18:18.5145588Z labeling (NA -> 0.4.2 ) [CRAN] 2021-05-16T20:18:18.5146178Z farver (NA -> 2.1.0 ) [CRAN] 2021-05-16T20:18:18.5146801Z R.methodsS3 (NA -> 1.8.1 ) [CRAN] 2021-05-16T20:18:18.5147410Z misc3d (NA -> 0.9-0 ) [CRAN] 2021-05-16T20:18:18.5147996Z rgl (NA -> 0.106.8 ) [CRAN] 2021-05-16T20:18:18.5148580Z plyr (NA -> 1.8.6 ) [CRAN] 2021-05-16T20:18:18.5149160Z tinytex (NA -> 0.31 ) [CRAN] 2021-05-16T20:18:18.5149756Z scales (NA -> 1.1.1 ) [CRAN] 2021-05-16T20:18:18.5150338Z isoband (NA -> 0.2.4 ) [CRAN] 2021-05-16T20:18:18.5150931Z gtable (NA -> 0.3.0 ) [CRAN] 2021-05-16T20:18:18.5151496Z R.oo (NA -> 1.24.0 ) [CRAN] 2021-05-16T20:18:18.5152093Z reshape2 (NA -> 1.4.4 ) [CRAN] 2021-05-16T20:18:18.5152707Z rmarkdown (NA -> 2.8 ) [CRAN] 2021-05-16T20:18:18.5153323Z ggplot2 (NA -> 3.3.3 ) [CRAN] 2021-05-16T20:18:18.5153920Z R.utils (NA -> 2.10.1 ) [CRAN] 2021-05-16T20:18:18.5154528Z matrixStats (NA -> 0.58.0 ) [CRAN] 2021-05-16T20:18:18.6661918Z Downloading GitHub repo neuroconductor/RNifti@929106d1b17d6c09c8b001b5e39d448ed9ef635f 2021-05-16T20:18:19.8764045Z 2021-05-16T20:18:20.0649313Z 2021-05-16T20:18:20.0654476Z checking for file ‘/tmp/Rtmp7t0BTN/remotesd55521f7d2ee/neuroconductor-RNifti-929106d/DESCRIPTION’ ... 2021-05-16T20:18:20.1593319Z 2021-05-16T20:18:20.1601739Z checking for file ‘/tmp/Rtmp7t0BTN/remotesd55521f7d2ee/neuroconductor-RNifti-929106d/DESCRIPTION’ ... 2021-05-16T20:18:20.1642007Z 2021-05-16T20:18:20.1643779Z ✔ checking for file ‘/tmp/Rtmp7t0BTN/remotesd55521f7d2ee/neuroconductor-RNifti-929106d/DESCRIPTION’ 2021-05-16T20:18:20.1658774Z ─ preparing ‘RNifti’: 2021-05-16T20:18:20.1674886Z ✔ checking DESCRIPTION meta-information 2021-05-16T20:18:20.1690442Z ─ cleaning src 2021-05-16T20:18:20.1708206Z ─ running ‘cleanup’ 2021-05-16T20:18:20.1724195Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-16T20:18:20.1903864Z 2021-05-16T20:18:20.1919989Z 2021-05-16T20:18:20.1921058Z ─ checking for empty or unneeded directories 2021-05-16T20:18:20.1961233Z 2021-05-16T20:18:20.1977524Z 2021-05-16T20:18:20.1978498Z ─ building ‘RNifti_1.3.1.tar.gz’ 2021-05-16T20:18:20.4891323Z 2021-05-16T20:18:20.4894113Z 2021-05-16T20:18:20.4894461Z 2021-05-16T20:18:20.5020017Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:18:20.5020805Z (as ‘lib’ is unspecified) 2021-05-16T20:18:20.8190157Z * installing *source* package ‘RNifti’ ... 2021-05-16T20:18:20.8191573Z ** using staged installation 2021-05-16T20:18:20.8349277Z ** libs 2021-05-16T20:18:20.8400178Z 2021-05-16T20:18:20.8402623Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c main.cpp -o main.o 2021-05-16T20:18:38.1792381Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zzz.c -o zzz.o 2021-05-16T20:18:38.2642407Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/adler32.c -o zlib/adler32.o 2021-05-16T20:18:38.8730851Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/compress.c -o zlib/compress.o 2021-05-16T20:18:38.8734596Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/crc32.c -o zlib/crc32.o 2021-05-16T20:18:38.8737552Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/deflate.c -o zlib/deflate.o 2021-05-16T20:18:38.9439110Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzclose.c -o zlib/gzclose.o 2021-05-16T20:18:38.9834002Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzlib.c -o zlib/gzlib.o 2021-05-16T20:18:39.0966939Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzread.c -o zlib/gzread.o 2021-05-16T20:18:39.2423138Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzwrite.c -o zlib/gzwrite.o 2021-05-16T20:18:39.3665039Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/infback.c -o zlib/infback.o 2021-05-16T20:18:39.5941684Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inffast.c -o zlib/inffast.o 2021-05-16T20:18:39.7006216Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inflate.c -o zlib/inflate.o 2021-05-16T20:18:40.1797655Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inftrees.c -o zlib/inftrees.o 2021-05-16T20:18:40.2701710Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/trees.c -o zlib/trees.o 2021-05-16T20:18:40.5617169Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/uncompr.c -o zlib/uncompr.o 2021-05-16T20:18:40.5965951Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/zutil.c -o zlib/zutil.o 2021-05-16T20:18:40.6382362Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c znzlib/znzlib.c -o znzlib/znzlib.o 2021-05-16T20:18:40.7114788Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c niftilib/nifti1_io.c -o niftilib/nifti1_io.o 2021-05-16T20:18:41.7755982Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c niftilib/nifti2_io.c -o niftilib/nifti2_io.o 2021-05-16T20:18:43.9875205Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o RNifti.so main.o zzz.o zlib/adler32.o zlib/compress.o zlib/crc32.o zlib/deflate.o zlib/gzclose.o zlib/gzlib.o zlib/gzread.o zlib/gzwrite.o zlib/infback.o zlib/inffast.o zlib/inflate.o zlib/inftrees.o zlib/trees.o zlib/uncompr.o zlib/zutil.o znzlib/znzlib.o niftilib/nifti1_io.o niftilib/nifti2_io.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:18:44.1650024Z installing to /home/runner/work/_temp/Library/00LOCK-RNifti/00new/RNifti/libs 2021-05-16T20:18:44.1770702Z ** R 2021-05-16T20:18:44.1847772Z ** inst 2021-05-16T20:18:44.1876512Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:18:44.8759388Z ** help 2021-05-16T20:18:44.9278467Z *** installing help indices 2021-05-16T20:18:44.9612358Z ** building package indices 2021-05-16T20:18:45.1667315Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:18:45.4179000Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:18:45.4403582Z ** testing if installed package can be loaded from final location 2021-05-16T20:18:45.6930263Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:18:45.6940555Z * DONE (RNifti) 2021-05-16T20:18:45.8801389Z Downloading GitHub repo neuroconductor/oro.nifti@bd06b05d2a090c743e51d745a826e8b77af278f0 2021-05-16T20:18:47.3889682Z base64enc (NA -> 0.1-3 ) [CRAN] 2021-05-16T20:18:48.3756215Z Installing 7 packages: base64enc, tinytex, htmltools, rmarkdown, rticles, abind, bitops 2021-05-16T20:18:48.3757788Z tinytex (NA -> 0.31 ) [CRAN] 2021-05-16T20:18:48.3760145Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:18:48.3761031Z htmltools (NA -> 0.5.1.1) [CRAN] 2021-05-16T20:18:48.3762674Z (as ‘lib’ is unspecified) 2021-05-16T20:18:48.3763391Z rmarkdown (NA -> 2.8 ) [CRAN] 2021-05-16T20:18:48.3764300Z rticles (NA -> 0.19 ) [CRAN] 2021-05-16T20:18:48.3765092Z abind (NA -> 1.4-5 ) [CRAN] 2021-05-16T20:18:48.3765904Z bitops (NA -> 1.0-7 ) [CRAN] 2021-05-16T20:19:01.7749406Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/base64enc_0.1-3.tar.gz' 2021-05-16T20:19:02.1685111Z Content type 'application/x-tar' length 7843 bytes 2021-05-16T20:19:02.1685860Z ================================================== 2021-05-16T20:19:02.1686344Z downloaded 7843 bytes 2021-05-16T20:19:02.1686663Z 2021-05-16T20:19:02.1729058Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tinytex_0.31.tar.gz' 2021-05-16T20:19:02.4800702Z Content type 'binary/octet-stream' length 29350 bytes (28 KB) 2021-05-16T20:19:02.4803527Z ================================================== 2021-05-16T20:19:02.4804143Z downloaded 28 KB 2021-05-16T20:19:02.4804551Z 2021-05-16T20:19:02.4837730Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/htmltools_0.5.1.1.tar.gz' 2021-05-16T20:19:02.8695619Z Content type 'binary/octet-stream' length 72110 bytes (70 KB) 2021-05-16T20:19:02.8759358Z ================================================== 2021-05-16T20:19:02.8759830Z downloaded 70 KB 2021-05-16T20:19:02.8760101Z 2021-05-16T20:19:02.8798404Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rmarkdown_2.8.tar.gz' 2021-05-16T20:19:03.8802073Z Content type 'binary/octet-stream' length 3236609 bytes (3.1 MB) 2021-05-16T20:19:03.8803675Z ================================================== 2021-05-16T20:19:03.8804324Z downloaded 3.1 MB 2021-05-16T20:19:03.8804811Z 2021-05-16T20:19:03.8806360Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rticles_0.19.tar.gz' 2021-05-16T20:19:04.7165055Z Content type 'binary/octet-stream' length 1634953 bytes (1.6 MB) 2021-05-16T20:19:04.7534700Z ================================================== 2021-05-16T20:19:04.7535597Z downloaded 1.6 MB 2021-05-16T20:19:04.7536178Z 2021-05-16T20:19:04.7577040Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/abind_1.4-5.tar.gz' 2021-05-16T20:19:06.6922563Z Content type 'application/x-tar' length 21895 bytes (21 KB) 2021-05-16T20:19:06.6926105Z ================================================== 2021-05-16T20:19:06.6926536Z downloaded 21 KB 2021-05-16T20:19:06.6926817Z 2021-05-16T20:19:06.6965280Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bitops_1.0-7.tar.gz' 2021-05-16T20:19:07.1324062Z Content type 'binary/octet-stream' length 10887 bytes (10 KB) 2021-05-16T20:19:07.1325528Z ================================================== 2021-05-16T20:19:07.1326206Z downloaded 10 KB 2021-05-16T20:19:07.1326720Z 2021-05-16T20:19:07.8811469Z * installing *source* package ‘base64enc’ ... 2021-05-16T20:19:07.8821404Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T20:19:07.8822946Z ** package ‘base64enc’ successfully unpacked and MD5 sums checked 2021-05-16T20:19:07.8824023Z ** using staged installation 2021-05-16T20:19:07.8824486Z ** libs 2021-05-16T20:19:07.8825531Z installing to /home/runner/work/_temp/Library/00LOCK-base64enc/00new/base64enc/libs 2021-05-16T20:19:07.8826472Z ** R 2021-05-16T20:19:07.8827281Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:19:07.8827853Z ** help 2021-05-16T20:19:07.8828328Z *** installing help indices 2021-05-16T20:19:07.8829576Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c uriencode.c -o uriencode.o 2021-05-16T20:19:07.8830981Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-16T20:19:07.8832648Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o base64enc.so base64.o uriencode.o utf8.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:19:07.8879391Z ** building package indices 2021-05-16T20:19:08.0695094Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:19:08.2440563Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:19:08.2614443Z ** testing if installed package can be loaded from final location 2021-05-16T20:19:08.4318407Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:19:08.4324138Z * DONE (base64enc) 2021-05-16T20:19:08.6412711Z * installing *source* package ‘tinytex’ ... 2021-05-16T20:19:08.6425194Z ** package ‘tinytex’ successfully unpacked and MD5 sums checked 2021-05-16T20:19:08.6426272Z ** using staged installation 2021-05-16T20:19:08.6626491Z ** R 2021-05-16T20:19:08.6694814Z ** inst 2021-05-16T20:19:08.6702238Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:19:09.3099938Z ** help 2021-05-16T20:19:09.3411428Z *** installing help indices 2021-05-16T20:19:09.3668538Z ** building package indices 2021-05-16T20:19:09.5592550Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:19:09.7359007Z ** testing if installed package can be loaded from final location 2021-05-16T20:19:09.9213177Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:19:09.9222627Z * DONE (tinytex) 2021-05-16T20:19:10.1264165Z * installing *source* package ‘abind’ ... 2021-05-16T20:19:10.1274381Z ** package ‘abind’ successfully unpacked and MD5 sums checked 2021-05-16T20:19:10.1275435Z ** using staged installation 2021-05-16T20:19:10.1377638Z ** R 2021-05-16T20:19:10.1423407Z ** inst 2021-05-16T20:19:10.1430985Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:19:10.6493043Z ** help 2021-05-16T20:19:10.6738383Z *** installing help indices 2021-05-16T20:19:10.6946967Z ** building package indices 2021-05-16T20:19:10.8810505Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:19:11.0493474Z ** testing if installed package can be loaded from final location 2021-05-16T20:19:11.2238174Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:19:11.2247341Z * DONE (abind) 2021-05-16T20:19:11.4186133Z * installing *source* package ‘bitops’ ... 2021-05-16T20:19:11.4194533Z ** package ‘bitops’ successfully unpacked and MD5 sums checked 2021-05-16T20:19:11.4195568Z ** using staged installation 2021-05-16T20:19:11.4285357Z ** libs 2021-05-16T20:19:11.4333469Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bit-ops.c -o bit-ops.o 2021-05-16T20:19:11.6100395Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cksum.c -o cksum.o 2021-05-16T20:19:11.6664356Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:19:11.7096166Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o bitops.so bit-ops.o cksum.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:19:11.7253780Z installing to /home/runner/work/_temp/Library/00LOCK-bitops/00new/bitops/libs 2021-05-16T20:19:11.7263424Z ** R 2021-05-16T20:19:11.7288047Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:19:11.9386845Z ** help 2021-05-16T20:19:11.9631738Z *** installing help indices 2021-05-16T20:19:11.9802652Z ** building package indices 2021-05-16T20:19:12.1643299Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:19:12.3331043Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:19:12.3503840Z ** testing if installed package can be loaded from final location 2021-05-16T20:19:12.5175679Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:19:12.5176510Z * DONE (bitops) 2021-05-16T20:19:12.7512157Z * installing *source* package ‘htmltools’ ... 2021-05-16T20:19:12.7532930Z ** package ‘htmltools’ successfully unpacked and MD5 sums checked 2021-05-16T20:19:12.7534135Z ** using staged installation 2021-05-16T20:19:12.7672257Z ** libs 2021-05-16T20:19:12.7719057Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:19:12.8156600Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c template.c -o template.o 2021-05-16T20:19:12.9163371Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o htmltools.so init.o template.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:19:12.9372356Z installing to /home/runner/work/_temp/Library/00LOCK-htmltools/00new/htmltools/libs 2021-05-16T20:19:12.9385157Z ** R 2021-05-16T20:19:12.9507872Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:19:14.2421978Z ** help 2021-05-16T20:19:14.3191179Z *** installing help indices 2021-05-16T20:19:14.3732652Z ** building package indices 2021-05-16T20:19:14.6018563Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:19:14.7925263Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:19:14.8097433Z ** testing if installed package can be loaded from final location 2021-05-16T20:19:15.0222819Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:19:15.0237324Z * DONE (htmltools) 2021-05-16T20:19:15.7531911Z * installing *source* package ‘rmarkdown’ ... 2021-05-16T20:19:15.7803766Z ** package ‘rmarkdown’ successfully unpacked and MD5 sums checked 2021-05-16T20:19:15.7805035Z ** using staged installation 2021-05-16T20:19:15.8061824Z ** R 2021-05-16T20:19:15.8417150Z ** inst 2021-05-16T20:19:15.8627865Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:19:18.7034100Z ** help 2021-05-16T20:19:18.8863277Z *** installing help indices 2021-05-16T20:19:19.0199619Z *** copying figures 2021-05-16T20:19:19.0202299Z ** building package indices 2021-05-16T20:19:19.2931213Z ** installing vignettes 2021-05-16T20:19:19.3007504Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:19:19.5260007Z ** testing if installed package can be loaded from final location 2021-05-16T20:19:19.8133657Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:19:19.8164083Z * DONE (rmarkdown) 2021-05-16T20:19:20.3487156Z * installing *source* package ‘rticles’ ... 2021-05-16T20:19:20.3646878Z ** package ‘rticles’ successfully unpacked and MD5 sums checked 2021-05-16T20:19:20.3648042Z ** using staged installation 2021-05-16T20:19:20.3849908Z ** R 2021-05-16T20:19:20.3908758Z ** inst 2021-05-16T20:19:20.4124260Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:19:20.8213175Z ** help 2021-05-16T20:19:20.8568184Z *** installing help indices 2021-05-16T20:19:20.8879820Z ** building package indices 2021-05-16T20:19:21.0822554Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:19:21.8848612Z ** testing if installed package can be loaded from final location 2021-05-16T20:19:21.8849207Z 2021-05-16T20:19:21.8850884Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:19:21.8853920Z checking for file ‘/tmp/Rtmp7t0BTN/remotesd5552a019465/neuroconductor-oro.nifti-bd06b05/DESCRIPTION’ ... 2021-05-16T20:19:21.8855044Z * DONE (rticles) 2021-05-16T20:19:21.8855348Z 2021-05-16T20:19:21.8855879Z The downloaded source packages are in 2021-05-16T20:19:21.8856822Z ‘/tmp/Rtmp7t0BTN/downloaded_packages’ 2021-05-16T20:19:21.8857323Z 2021-05-16T20:19:21.8858687Z ✔ checking for file ‘/tmp/Rtmp7t0BTN/remotesd5552a019465/neuroconductor-oro.nifti-bd06b05/DESCRIPTION’ 2021-05-16T20:19:21.8859562Z 2021-05-16T20:19:21.8859879Z 2021-05-16T20:19:21.8860484Z ─ preparing ‘oro.nifti’: 2021-05-16T20:19:21.8860820Z 2021-05-16T20:19:21.8861133Z 2021-05-16T20:19:21.8861891Z checking DESCRIPTION meta-information ... 2021-05-16T20:19:21.8862551Z 2021-05-16T20:19:21.8863301Z ✔ checking DESCRIPTION meta-information 2021-05-16T20:19:21.9073480Z 2021-05-16T20:19:21.9103178Z 2021-05-16T20:19:21.9105837Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-16T20:19:21.9117125Z 2021-05-16T20:19:21.9139440Z 2021-05-16T20:19:21.9141421Z ─ checking for empty or unneeded directories 2021-05-16T20:19:21.9149070Z 2021-05-16T20:19:21.9151233Z 2021-05-16T20:19:21.9153065Z Removed empty directory ‘oro.nifti/vignettes’ 2021-05-16T20:19:21.9155992Z Omitted ‘LazyData’ and ‘LazyDataCompression’ from DESCRIPTION 2021-05-16T20:19:21.9269361Z 2021-05-16T20:19:21.9290922Z 2021-05-16T20:19:21.9293112Z ─ building ‘oro.nifti_0.10.3.tar.gz’ 2021-05-16T20:19:22.3945504Z 2021-05-16T20:19:22.3947286Z 2021-05-16T20:19:22.3947911Z 2021-05-16T20:19:22.4496207Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:19:22.4497028Z (as ‘lib’ is unspecified) 2021-05-16T20:19:22.9517630Z * installing *source* package ‘oro.nifti’ ... 2021-05-16T20:19:22.9519028Z ** using staged installation 2021-05-16T20:19:22.9705183Z ** R 2021-05-16T20:19:23.0133057Z ** demo 2021-05-16T20:19:23.0139295Z ** inst 2021-05-16T20:19:23.0208367Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:19:29.2941010Z 2021-05-16T20:19:29.2942248Z ** help 2021-05-16T20:19:29.2943539Z Creating a new generic function for ‘origin’ in package ‘oro.nifti’ 2021-05-16T20:19:29.6364680Z *** installing help indices 2021-05-16T20:19:29.8799628Z ** building package indices 2021-05-16T20:19:30.2831976Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:19:30.8174169Z ** testing if installed package can be loaded from final location 2021-05-16T20:19:31.8872221Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:19:31.8873731Z * DONE (oro.nifti) 2021-05-16T20:19:31.8874799Z Downloading GitHub repo neuroconductor/brainR@30deb980379774a44b6be4e1030c1faf4a0115bd 2021-05-16T20:19:33.1945797Z jquerylib (NA -> 0.1.4 ) [CRAN] 2021-05-16T20:19:33.1947977Z Installing 16 packages: jquerylib, sass, bslib, promises, later, sourcetools, xtable, httpuv, webshot, htmlwidgets, miniUI, shiny, manipulateWidget, crosstalk, misc3d, rgl 2021-05-16T20:19:33.1949444Z sass (NA -> 0.4.0 ) [CRAN] 2021-05-16T20:19:33.1950600Z bslib (NA -> 0.2.5 ) [CRAN] 2021-05-16T20:19:33.1951545Z promises (NA -> 1.2.0.1) [CRAN] 2021-05-16T20:19:33.1952459Z later (NA -> 1.2.0 ) [CRAN] 2021-05-16T20:19:33.1953374Z sourcetools (NA -> 0.1.7 ) [CRAN] 2021-05-16T20:19:33.1954308Z xtable (NA -> 1.8-4 ) [CRAN] 2021-05-16T20:19:33.1955211Z httpuv (NA -> 1.6.1 ) [CRAN] 2021-05-16T20:19:33.1956155Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:19:33.1957127Z (as ‘lib’ is unspecified) 2021-05-16T20:19:33.1958223Z webshot (NA -> 0.5.2 ) [CRAN] 2021-05-16T20:19:33.1960038Z htmlwidgets (NA -> 1.5.3 ) [CRAN] 2021-05-16T20:19:33.1960994Z miniUI (NA -> 0.1.1.1) [CRAN] 2021-05-16T20:19:33.1961805Z shiny (NA -> 1.6.0 ) [CRAN] 2021-05-16T20:19:33.1962650Z manipulat... (NA -> 0.10.1 ) [CRAN] 2021-05-16T20:19:33.1963504Z crosstalk (NA -> 1.1.1 ) [CRAN] 2021-05-16T20:19:33.1964311Z misc3d (NA -> 0.9-0 ) [CRAN] 2021-05-16T20:19:33.1965113Z rgl (NA -> 0.106.8) [CRAN] 2021-05-16T20:19:47.7467048Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/jquerylib_0.1.4.tar.gz' 2021-05-16T20:19:48.2522366Z Content type 'binary/octet-stream' length 520197 bytes (508 KB) 2021-05-16T20:19:48.2776104Z ================================================== 2021-05-16T20:19:48.2776927Z downloaded 508 KB 2021-05-16T20:19:48.2777441Z 2021-05-16T20:19:48.2816742Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sass_0.4.0.tar.gz' 2021-05-16T20:19:48.7500823Z Content type 'binary/octet-stream' length 3023602 bytes (2.9 MB) 2021-05-16T20:19:48.8233171Z ================================================== 2021-05-16T20:19:48.8233874Z downloaded 2.9 MB 2021-05-16T20:19:48.8234131Z 2021-05-16T20:19:48.8278078Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bslib_0.2.5.tar.gz' 2021-05-16T20:19:50.6349574Z Content type 'binary/octet-stream' length 3810957 bytes (3.6 MB) 2021-05-16T20:19:51.0266948Z ================================================== 2021-05-16T20:19:51.0267884Z downloaded 3.6 MB 2021-05-16T20:19:51.0268408Z 2021-05-16T20:19:51.0310164Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/promises_1.2.0.1.tar.gz' 2021-05-16T20:19:51.5376619Z Content type 'binary/octet-stream' length 3137334 bytes (3.0 MB) 2021-05-16T20:19:51.6885605Z ================================================== 2021-05-16T20:19:51.6886557Z downloaded 3.0 MB 2021-05-16T20:19:51.6887137Z 2021-05-16T20:19:51.6931900Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/later_1.2.0.tar.gz' 2021-05-16T20:19:52.1990081Z Content type 'binary/octet-stream' length 62650 bytes (61 KB) 2021-05-16T20:19:52.1991352Z ================================================== 2021-05-16T20:19:52.1992275Z downloaded 61 KB 2021-05-16T20:19:52.1992655Z 2021-05-16T20:19:52.2036003Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sourcetools_0.1.7.tar.gz' 2021-05-16T20:19:52.7099757Z Content type 'application/x-tar' length 24150 bytes (23 KB) 2021-05-16T20:19:52.7100465Z ================================================== 2021-05-16T20:19:52.7100921Z downloaded 23 KB 2021-05-16T20:19:52.7101225Z 2021-05-16T20:19:52.7143213Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xtable_1.8-4.tar.gz' 2021-05-16T20:19:53.8942471Z Content type 'application/x-tar' length 565474 bytes (552 KB) 2021-05-16T20:19:53.8943410Z ================================================== 2021-05-16T20:19:53.8943986Z downloaded 552 KB 2021-05-16T20:19:53.8944390Z 2021-05-16T20:19:53.8945904Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/httpuv_1.6.1.tar.gz' 2021-05-16T20:19:54.8796909Z Content type 'binary/octet-stream' length 1821315 bytes (1.7 MB) 2021-05-16T20:19:54.9467522Z ================================================== 2021-05-16T20:19:54.9468207Z downloaded 1.7 MB 2021-05-16T20:19:54.9468616Z 2021-05-16T20:19:54.9510150Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/webshot_0.5.2.tar.gz' 2021-05-16T20:19:56.3948741Z Content type 'binary/octet-stream' length 159097 bytes (155 KB) 2021-05-16T20:19:56.3949610Z ================================================== 2021-05-16T20:19:56.3950161Z downloaded 155 KB 2021-05-16T20:19:56.3950564Z 2021-05-16T20:19:56.3952066Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/htmlwidgets_1.5.3.tar.gz' 2021-05-16T20:19:56.3953641Z Content type 'binary/octet-stream' length 323578 bytes (315 KB) 2021-05-16T20:19:56.3954431Z ================================================== 2021-05-16T20:19:56.3954987Z downloaded 315 KB 2021-05-16T20:19:56.3955361Z 2021-05-16T20:19:56.3956822Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/miniUI_0.1.1.1.tar.gz' 2021-05-16T20:19:56.5727608Z Content type 'application/x-tar' length 99201 bytes (96 KB) 2021-05-16T20:19:56.5781612Z ================================================== 2021-05-16T20:19:56.5782072Z downloaded 96 KB 2021-05-16T20:19:56.5782338Z 2021-05-16T20:19:56.5822752Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/shiny_1.6.0.tar.gz' 2021-05-16T20:19:57.1883229Z Content type 'binary/octet-stream' length 4164395 bytes (4.0 MB) 2021-05-16T20:19:57.2326838Z ================================================== 2021-05-16T20:19:57.2327647Z downloaded 4.0 MB 2021-05-16T20:19:57.2328092Z 2021-05-16T20:19:57.2370085Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/manipulateWidget_0.10.1.tar.gz' 2021-05-16T20:19:57.7432711Z Content type 'binary/octet-stream' length 3175142 bytes (3.0 MB) 2021-05-16T20:19:57.7843342Z ================================================== 2021-05-16T20:19:57.7844361Z downloaded 3.0 MB 2021-05-16T20:19:57.7844842Z 2021-05-16T20:19:57.7887397Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/crosstalk_1.1.1.tar.gz' 2021-05-16T20:19:58.2945049Z Content type 'binary/octet-stream' length 676876 bytes (661 KB) 2021-05-16T20:19:58.3368483Z ================================================== 2021-05-16T20:19:58.3369076Z downloaded 661 KB 2021-05-16T20:19:58.3369346Z 2021-05-16T20:19:58.3414717Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/misc3d_0.9-0.tar.gz' 2021-05-16T20:19:59.7378896Z Content type 'binary/octet-stream' length 67105 bytes (65 KB) 2021-05-16T20:19:59.7381774Z ================================================== 2021-05-16T20:19:59.7382581Z downloaded 65 KB 2021-05-16T20:19:59.7383135Z 2021-05-16T20:19:59.7425192Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rgl_0.106.8.tar.gz' 2021-05-16T20:20:00.2820391Z Content type 'binary/octet-stream' length 3046360 bytes (2.9 MB) 2021-05-16T20:20:00.5091836Z ================================================== 2021-05-16T20:20:00.5092587Z downloaded 2.9 MB 2021-05-16T20:20:00.5092860Z 2021-05-16T20:20:00.7701450Z * installing *source* package ‘jquerylib’ ... 2021-05-16T20:20:00.7743190Z ** package ‘jquerylib’ successfully unpacked and MD5 sums checked 2021-05-16T20:20:00.7744410Z ** using staged installation 2021-05-16T20:20:00.7892160Z ** R 2021-05-16T20:20:00.7910856Z ** inst 2021-05-16T20:20:00.7941511Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:20:01.0176662Z ** help 2021-05-16T20:20:01.0261181Z *** installing help indices 2021-05-16T20:20:01.0396397Z ** building package indices 2021-05-16T20:20:01.2149327Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:20:01.4042179Z ** testing if installed package can be loaded from final location 2021-05-16T20:20:01.5904757Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:20:01.5911315Z * DONE (jquerylib) 2021-05-16T20:20:02.1285912Z * installing *source* package ‘sass’ ... 2021-05-16T20:20:02.1458700Z ** package ‘sass’ successfully unpacked and MD5 sums checked 2021-05-16T20:20:02.1461111Z ** using staged installation 2021-05-16T20:20:02.1619940Z ** libs 2021-05-16T20:20:02.1663041Z /opt/R/devel/lib/R/share/make/shlib.mk:18: warning: overriding recipe for target 'shlib-clean' 2021-05-16T20:20:02.1664382Z Makevars:12: warning: ignoring old recipe for target 'shlib-clean' 2021-05-16T20:20:02.1672603Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libsass/include -I/usr/local/include -fpic -g -O2 -c compile.c -o compile.o 2021-05-16T20:20:02.2483681Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libsass/include -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:20:02.2838320Z MAKEFLAGS= CC="gcc" CFLAGS="-g -O2 " CXX="g++ -std=gnu++14" AR="ar" LDFLAGS="-L/usr/local/lib" make -C libsass 2021-05-16T20:20:02.2863653Z make[1]: Entering directory '/tmp/Rtmp29dZNU/R.INSTALLd8da32869077/sass/src/libsass' 2021-05-16T20:20:02.2912443Z gcc -g -O2 -O2 -I ./include -fPIC -c -o src/cencode.o src/cencode.c 2021-05-16T20:20:02.3276182Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast.o src/ast.cpp 2021-05-16T20:20:05.8966259Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_values.o src/ast_values.cpp 2021-05-16T20:20:08.5152753Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_supports.o src/ast_supports.cpp 2021-05-16T20:20:09.6495429Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_cmp.o src/ast_sel_cmp.cpp 2021-05-16T20:20:10.9079329Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_unify.o src/ast_sel_unify.cpp 2021-05-16T20:20:12.5265112Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_super.o src/ast_sel_super.cpp 2021-05-16T20:20:14.0422674Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_weave.o src/ast_sel_weave.cpp 2021-05-16T20:20:16.7698020Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_selectors.o src/ast_selectors.cpp 2021-05-16T20:20:20.0908013Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/context.o src/context.cpp 2021-05-16T20:20:24.0037811Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/constants.o src/constants.cpp 2021-05-16T20:20:24.3182440Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_utils.o src/fn_utils.cpp 2021-05-16T20:20:25.8933302Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_miscs.o src/fn_miscs.cpp 2021-05-16T20:20:27.9434554Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_maps.o src/fn_maps.cpp 2021-05-16T20:20:29.5913257Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_lists.o src/fn_lists.cpp 2021-05-16T20:20:32.0351573Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_colors.o src/fn_colors.cpp 2021-05-16T20:20:34.4964894Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_numbers.o src/fn_numbers.cpp 2021-05-16T20:20:36.2946230Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_strings.o src/fn_strings.cpp 2021-05-16T20:20:37.9011064Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_selectors.o src/fn_selectors.cpp 2021-05-16T20:20:39.7378333Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/color_maps.o src/color_maps.cpp 2021-05-16T20:20:41.7004369Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/environment.o src/environment.cpp 2021-05-16T20:20:42.8345885Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_fwd_decl.o src/ast_fwd_decl.cpp 2021-05-16T20:20:43.7176323Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/bind.o src/bind.cpp 2021-05-16T20:20:45.9439899Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/file.o src/file.cpp 2021-05-16T20:20:47.6975360Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/util.o src/util.cpp 2021-05-16T20:20:49.0269410Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/util_string.o src/util_string.cpp 2021-05-16T20:20:49.4395404Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/json.o src/json.cpp 2021-05-16T20:20:49.9488106Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/units.o src/units.cpp 2021-05-16T20:20:50.9778237Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/values.o src/values.cpp 2021-05-16T20:20:52.1501053Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/plugins.o src/plugins.cpp 2021-05-16T20:20:52.7077640Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/source.o src/source.cpp 2021-05-16T20:20:53.0888167Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/position.o src/position.cpp 2021-05-16T20:20:53.5064010Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/lexer.o src/lexer.cpp 2021-05-16T20:20:53.9284742Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/parser.o src/parser.cpp 2021-05-16T20:21:02.9771934Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/parser_selectors.o src/parser_selectors.cpp 2021-05-16T20:21:04.7791870Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/prelexer.o src/prelexer.cpp 2021-05-16T20:21:06.1695986Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/eval.o src/eval.cpp 2021-05-16T20:21:10.5940212Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/eval_selectors.o src/eval_selectors.cpp 2021-05-16T20:21:11.6568364Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/expand.o src/expand.cpp 2021-05-16T20:21:15.2604538Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/listize.o src/listize.cpp 2021-05-16T20:21:16.3947497Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/cssize.o src/cssize.cpp 2021-05-16T20:21:18.7590349Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/extender.o src/extender.cpp 2021-05-16T20:21:23.1008184Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/extension.o src/extension.cpp 2021-05-16T20:21:24.0878340Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/stylesheet.o src/stylesheet.cpp 2021-05-16T20:21:24.6264718Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/output.o src/output.cpp 2021-05-16T20:21:26.1068646Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/inspect.o src/inspect.cpp 2021-05-16T20:21:29.1677419Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/emitter.o src/emitter.cpp 2021-05-16T20:21:29.7433294Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/check_nesting.o src/check_nesting.cpp 2021-05-16T20:21:31.4404469Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/remove_placeholders.o src/remove_placeholders.cpp 2021-05-16T20:21:32.6787936Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass.o src/sass.cpp 2021-05-16T20:21:33.8370890Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_values.o src/sass_values.cpp 2021-05-16T20:21:34.9105654Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_context.o src/sass_context.cpp 2021-05-16T20:21:36.2766425Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_functions.o src/sass_functions.cpp 2021-05-16T20:21:37.2514010Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass2scss.o src/sass2scss.cpp 2021-05-16T20:21:38.1767114Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/backtrace.o src/backtrace.cpp 2021-05-16T20:21:38.5982576Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/operators.o src/operators.cpp 2021-05-16T20:21:40.0747319Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast2c.o src/ast2c.cpp 2021-05-16T20:21:41.0870301Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/c2ast.o src/c2ast.cpp 2021-05-16T20:21:42.3252547Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/to_value.o src/to_value.cpp 2021-05-16T20:21:43.8676107Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/source_map.o src/source_map.cpp 2021-05-16T20:21:45.0240478Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/error_handling.o src/error_handling.cpp 2021-05-16T20:21:47.2275135Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/memory/allocator.o src/memory/allocator.cpp 2021-05-16T20:21:47.5390188Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/memory/shared_ptr.o src/memory/shared_ptr.cpp 2021-05-16T20:21:47.8538640Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/utf8_string.o src/utf8_string.cpp 2021-05-16T20:21:48.2712170Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/base64vlq.o src/base64vlq.cpp 2021-05-16T20:21:48.6038254Z mkdir lib 2021-05-16T20:21:48.6056215Z ar rcvs lib/libsass.a src/cencode.o src/ast.o src/ast_values.o src/ast_supports.o src/ast_sel_cmp.o src/ast_sel_unify.o src/ast_sel_super.o src/ast_sel_weave.o src/ast_selectors.o src/context.o src/constants.o src/fn_utils.o src/fn_miscs.o src/fn_maps.o src/fn_lists.o src/fn_colors.o src/fn_numbers.o src/fn_strings.o src/fn_selectors.o src/color_maps.o src/environment.o src/ast_fwd_decl.o src/bind.o src/file.o src/util.o src/util_string.o src/json.o src/units.o src/values.o src/plugins.o src/source.o src/position.o src/lexer.o src/parser.o src/parser_selectors.o src/prelexer.o src/eval.o src/eval_selectors.o src/expand.o src/listize.o src/cssize.o src/extender.o src/extension.o src/stylesheet.o src/output.o src/inspect.o src/emitter.o src/check_nesting.o src/remove_placeholders.o src/sass.o src/sass_values.o src/sass_context.o src/sass_functions.o src/sass2scss.o src/backtrace.o src/operators.o src/ast2c.o src/c2ast.o src/to_value.o src/source_map.o src/error_handling.o src/memory/allocator.o src/memory/shared_ptr.o src/utf8_string.o src/base64vlq.o 2021-05-16T20:21:48.6407726Z a - src/cencode.o 2021-05-16T20:21:48.6410109Z a - src/ast.o 2021-05-16T20:21:48.6411146Z a - src/ast_values.o 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src/utf8_string.o 2021-05-16T20:21:48.6452850Z a - src/base64vlq.o 2021-05-16T20:21:48.6453839Z make[1]: Leaving directory '/tmp/Rtmp29dZNU/R.INSTALLd8da32869077/sass/src/libsass' 2021-05-16T20:21:48.6455307Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o sass.so compile.o init.o ./libsass/lib/libsass.a -lstdc++ -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:21:48.8422381Z installing to /home/runner/work/_temp/Library/00LOCK-sass/00new/sass/libs 2021-05-16T20:21:48.8470606Z ** R 2021-05-16T20:21:48.8577809Z ** inst 2021-05-16T20:21:48.8624921Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:21:50.0287895Z ** help 2021-05-16T20:21:50.0958246Z *** installing help indices 2021-05-16T20:21:50.1382658Z *** copying figures 2021-05-16T20:21:50.1385412Z ** building package indices 2021-05-16T20:21:50.3493302Z ** installing vignettes 2021-05-16T20:21:50.3548097Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:21:50.5596536Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:21:50.5802855Z ** testing if installed package can be loaded from final location 2021-05-16T20:21:50.8018680Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:21:50.8040004Z * DONE (sass) 2021-05-16T20:21:51.0430722Z * installing *source* package ‘later’ ... 2021-05-16T20:21:51.0450469Z ** package ‘later’ successfully unpacked and MD5 sums checked 2021-05-16T20:21:51.0451717Z ** using staged installation 2021-05-16T20:21:51.0470476Z Running configure script 2021-05-16T20:21:51.1089354Z -latomic linker flag not needed. 2021-05-16T20:21:51.1241715Z ** libs 2021-05-16T20:21:51.1296466Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-16T20:21:55.6339406Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c callback_registry.cpp -o callback_registry.o 2021-05-16T20:22:00.4133606Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c debug.cpp -o debug.o 2021-05-16T20:22:00.7482110Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:22:00.7920369Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c later.cpp -o later.o 2021-05-16T20:22:05.3572652Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c later_posix.cpp -o later_posix.o 2021-05-16T20:22:08.3896650Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c later_win32.cpp -o later_win32.o 2021-05-16T20:22:08.4051208Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c timer_posix.cpp -o timer_posix.o 2021-05-16T20:22:08.7968469Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c timestamp_unix.cpp -o timestamp_unix.o 2021-05-16T20:22:09.0800576Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c timestamp_win32.cpp -o timestamp_win32.o 2021-05-16T20:22:09.0940848Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c tinycthread.c -o tinycthread.o 2021-05-16T20:22:09.1737651Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o later.so RcppExports.o callback_registry.o debug.o init.o later.o later_posix.o later_win32.o timer_posix.o timestamp_unix.o timestamp_win32.o tinycthread.o -pthread -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:22:09.2793751Z installing to /home/runner/work/_temp/Library/00LOCK-later/00new/later/libs 2021-05-16T20:22:09.2844202Z ** R 2021-05-16T20:22:09.2878729Z ** inst 2021-05-16T20:22:09.2889112Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:22:09.6307408Z ** help 2021-05-16T20:22:09.6504554Z *** installing help indices 2021-05-16T20:22:09.6708319Z ** building package indices 2021-05-16T20:22:09.8533036Z ** installing vignettes 2021-05-16T20:22:09.8620751Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:22:10.1294120Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:22:10.1488834Z ** testing if installed package can be loaded from final location 2021-05-16T20:22:10.4090359Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:22:10.4096839Z * DONE (later) 2021-05-16T20:22:10.6361030Z * installing *source* package ‘sourcetools’ ... 2021-05-16T20:22:10.6381537Z ** package ‘sourcetools’ successfully unpacked and MD5 sums checked 2021-05-16T20:22:10.6385218Z ** using staged installation 2021-05-16T20:22:10.6480603Z ** libs 2021-05-16T20:22:10.6530215Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fpic -g -O2 -c Reader.cpp -o Reader.o 2021-05-16T20:22:11.4735563Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fpic -g -O2 -c Tokenizer.cpp -o Tokenizer.o 2021-05-16T20:22:12.9918611Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fpic -g -O2 -c sourcetools-init.c -o sourcetools-init.o 2021-05-16T20:22:13.0366129Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o sourcetools.so Reader.o Tokenizer.o sourcetools-init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:22:13.0963545Z installing to /home/runner/work/_temp/Library/00LOCK-sourcetools/00new/sourcetools/libs 2021-05-16T20:22:13.0982578Z ** R 2021-05-16T20:22:13.1006792Z ** inst 2021-05-16T20:22:13.1036406Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:22:13.3041438Z ** help 2021-05-16T20:22:13.3153843Z *** installing help indices 2021-05-16T20:22:13.3301532Z ** building package indices 2021-05-16T20:22:13.5112898Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:22:13.6799587Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:22:13.6977224Z ** testing if installed package can be loaded from final location 2021-05-16T20:22:13.8606275Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:22:13.8617132Z * DONE (sourcetools) 2021-05-16T20:22:14.1089015Z * installing *source* package ‘xtable’ ... 2021-05-16T20:22:14.1119597Z ** package ‘xtable’ successfully unpacked and MD5 sums checked 2021-05-16T20:22:14.1120763Z ** using staged installation 2021-05-16T20:22:14.1271469Z ** R 2021-05-16T20:22:14.1357175Z ** data 2021-05-16T20:22:14.1359514Z ** inst 2021-05-16T20:22:14.1377593Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:22:14.9765911Z ** help 2021-05-16T20:22:15.0601208Z *** installing help indices 2021-05-16T20:22:15.1085483Z ** building package indices 2021-05-16T20:22:15.3278625Z ** installing vignettes 2021-05-16T20:22:15.3344458Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:22:15.5017051Z ** testing if installed package can be loaded from final location 2021-05-16T20:22:15.6868000Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:22:15.6881188Z * DONE (xtable) 2021-05-16T20:22:15.9202632Z * installing *source* package ‘webshot’ ... 2021-05-16T20:22:15.9223637Z ** package ‘webshot’ successfully unpacked and MD5 sums checked 2021-05-16T20:22:15.9224716Z ** using staged installation 2021-05-16T20:22:15.9353847Z ** R 2021-05-16T20:22:15.9404490Z ** inst 2021-05-16T20:22:15.9422978Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:22:16.3602145Z ** help 2021-05-16T20:22:16.3826649Z *** installing help indices 2021-05-16T20:22:16.4091172Z ** building package indices 2021-05-16T20:22:16.5954087Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:22:16.7632225Z ** testing if installed package can be loaded from final location 2021-05-16T20:22:16.9336331Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:22:16.9345943Z * DONE (webshot) 2021-05-16T20:22:17.1711808Z * installing *source* package ‘htmlwidgets’ ... 2021-05-16T20:22:17.1736959Z ** package ‘htmlwidgets’ successfully unpacked and MD5 sums checked 2021-05-16T20:22:17.1738023Z ** using staged installation 2021-05-16T20:22:17.1873755Z ** R 2021-05-16T20:22:17.1942914Z ** inst 2021-05-16T20:22:17.1958691Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:22:17.7663100Z Failed with error: ‘there is no package called ‘shiny’’ 2021-05-16T20:22:17.7664902Z ** help 2021-05-16T20:22:17.8026786Z *** installing help indices 2021-05-16T20:22:18.4330824Z ** building package indices 2021-05-16T20:22:18.4338217Z ** installing vignettes 2021-05-16T20:22:18.4339082Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:22:18.4340020Z ** testing if installed package can be loaded from final location 2021-05-16T20:22:18.4341000Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:22:18.4341787Z * DONE (htmlwidgets) 2021-05-16T20:22:18.7452786Z * installing *source* package ‘crosstalk’ ... 2021-05-16T20:22:18.7527821Z ** package ‘crosstalk’ successfully unpacked and MD5 sums checked 2021-05-16T20:22:18.7528881Z ** using staged installation 2021-05-16T20:22:18.7674694Z ** R 2021-05-16T20:22:18.7724425Z ** inst 2021-05-16T20:22:18.7787994Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:22:19.8132636Z ** help 2021-05-16T20:22:19.8464458Z *** installing help indices 2021-05-16T20:22:19.8775342Z ** building package indices 2021-05-16T20:22:20.0717351Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:22:20.2668534Z ** testing if installed package can be loaded from final location 2021-05-16T20:22:20.4751903Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:22:20.4770842Z * DONE (crosstalk) 2021-05-16T20:22:20.6880773Z * installing *source* package ‘misc3d’ ... 2021-05-16T20:22:20.6894967Z ** package ‘misc3d’ successfully unpacked and MD5 sums checked 2021-05-16T20:22:20.6896024Z ** using staged installation 2021-05-16T20:22:20.7043767Z ** R 2021-05-16T20:22:20.7162431Z ** data 2021-05-16T20:22:20.7165354Z ** demo 2021-05-16T20:22:20.7171056Z ** inst 2021-05-16T20:22:20.7178301Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:22:23.1030497Z ##[warning]Warning: no DISPLAY variable so Tk is not available 2021-05-16T20:22:23.1043285Z ** help 2021-05-16T20:22:23.1487327Z *** installing help indices 2021-05-16T20:22:23.1863894Z ** building package indices 2021-05-16T20:22:23.4005161Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:22:23.5805005Z ##[warning]Warning: no DISPLAY variable so Tk is not available 2021-05-16T20:22:23.5839246Z ** testing if installed package can be loaded from final location 2021-05-16T20:22:23.7853982Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:22:23.7856007Z ##[warning]Warning: no DISPLAY variable so Tk is not available 2021-05-16T20:22:23.7875530Z * DONE (misc3d) 2021-05-16T20:22:24.5248770Z * installing *source* package ‘bslib’ ... 2021-05-16T20:22:24.5514849Z ** package ‘bslib’ successfully unpacked and MD5 sums checked 2021-05-16T20:22:24.5515524Z ** using staged installation 2021-05-16T20:22:24.5686305Z ** R 2021-05-16T20:22:24.6302781Z ** inst 2021-05-16T20:22:24.6603921Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:22:25.5042176Z ** help 2021-05-16T20:22:25.5573286Z *** installing help indices 2021-05-16T20:22:25.5953444Z *** copying figures 2021-05-16T20:22:25.5956813Z ** building package indices 2021-05-16T20:22:25.7995316Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:22:26.0347756Z ** testing if installed package can be loaded from final location 2021-05-16T20:22:26.2889202Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:22:26.2950828Z * DONE (bslib) 2021-05-16T20:22:26.6857918Z * installing *source* package ‘promises’ ... 2021-05-16T20:22:26.6967106Z ** package ‘promises’ successfully unpacked and MD5 sums checked 2021-05-16T20:22:26.6969565Z ** using staged installation 2021-05-16T20:22:26.7108756Z ** libs 2021-05-16T20:22:26.7160492Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/later/include' -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-16T20:22:30.5685786Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/later/include' -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c promise_task.cpp -o promise_task.o 2021-05-16T20:22:34.0198179Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o promises.so RcppExports.o promise_task.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:22:34.0920272Z installing to /home/runner/work/_temp/Library/00LOCK-promises/00new/promises/libs 2021-05-16T20:22:34.0946526Z ** R 2021-05-16T20:22:34.1021662Z ** inst 2021-05-16T20:22:34.1061188Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:22:35.8633466Z ** help 2021-05-16T20:22:35.9090982Z *** installing help indices 2021-05-16T20:22:35.9397497Z *** copying figures 2021-05-16T20:22:35.9401911Z ** building package indices 2021-05-16T20:22:36.1357525Z ** installing vignettes 2021-05-16T20:22:36.1454189Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:22:36.4192962Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:22:36.4378678Z ** testing if installed package can be loaded from final location 2021-05-16T20:22:36.7355838Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:22:36.7378802Z * DONE (promises) 2021-05-16T20:22:37.4436399Z * installing *source* package ‘httpuv’ ... 2021-05-16T20:22:37.4682442Z ** package ‘httpuv’ successfully unpacked and MD5 sums checked 2021-05-16T20:22:37.4683773Z ** using staged installation 2021-05-16T20:22:37.4840053Z ** libs 2021-05-16T20:22:37.4915399Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c RcppExports-legacy.cpp -o RcppExports-legacy.o 2021-05-16T20:22:41.1889089Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-16T20:22:46.1426509Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c callback.cpp -o callback.o 2021-05-16T20:22:46.4503792Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c callbackqueue.cpp -o callbackqueue.o 2021-05-16T20:22:46.9067208Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c filedatasource-unix.cpp -o filedatasource-unix.o 2021-05-16T20:22:50.0287047Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c filedatasource-win.cpp -o filedatasource-win.o 2021-05-16T20:22:50.0431259Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c fs.cpp -o fs.o 2021-05-16T20:22:52.9099454Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c http.cpp -o http.o 2021-05-16T20:22:56.7181098Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c httprequest.cpp -o httprequest.o 2021-05-16T20:23:03.8698139Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c httpresponse.cpp -o httpresponse.o 2021-05-16T20:23:07.5477144Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c httpuv.cpp -o httpuv.o 2021-05-16T20:23:13.1491711Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c md5.c -o md5.o 2021-05-16T20:23:13.2681125Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c mime.cpp -o mime.o 2021-05-16T20:23:16.0338704Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c set_invalid_parameter.c -o set_invalid_parameter.o 2021-05-16T20:23:16.0477903Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c socket.cpp -o socket.o 2021-05-16T20:23:19.3589303Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c staticpath.cpp -o staticpath.o 2021-05-16T20:23:26.0819128Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c thread.cpp -o thread.o 2021-05-16T20:23:26.1595431Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c timegm.cpp -o timegm.o 2021-05-16T20:23:26.1952881Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c utils.cpp -o utils.o 2021-05-16T20:23:29.6597964Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c uvutil.cpp -o uvutil.o 2021-05-16T20:23:32.6304998Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c webapplication.cpp -o webapplication.o 2021-05-16T20:23:40.5839166Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c websockets-base.cpp -o websockets-base.o 2021-05-16T20:23:40.8413886Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c websockets-hixie76.cpp -o websockets-hixie76.o 2021-05-16T20:23:43.7806038Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c websockets-hybi03.cpp -o websockets-hybi03.o 2021-05-16T20:23:47.1017031Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c websockets-ietf.cpp -o websockets-ietf.o 2021-05-16T20:23:50.2622885Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c websockets.cpp -o websockets.o 2021-05-16T20:23:53.7000314Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c winutils.cpp -o winutils.o 2021-05-16T20:23:53.7150057Z cp -p -f libuv/m4/lt_obsolete.m4 libuv/m4/lt~obsolete.m4 2021-05-16T20:23:53.7177877Z (cd libuv \ 2021-05-16T20:23:53.7178665Z && touch aclocal.m4 \ 2021-05-16T20:23:53.7179841Z && touch -r aclocal.m4 configure Makefile.in \ 2021-05-16T20:23:53.7180587Z && chmod +x configure \ 2021-05-16T20:23:53.7182092Z && CC="gcc" CFLAGS="-g -O2 -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" LDFLAGS="-L/usr/local/lib" ./configure "--quiet") 2021-05-16T20:23:57.4238004Z make --directory=libuv \ 2021-05-16T20:23:57.4239022Z HAVE_DTRACE=0 2021-05-16T20:23:57.4338268Z make[1]: Entering directory '/tmp/RtmpbHTCBy/R.INSTALLdca81617b87b/httpuv/src/libuv' 2021-05-16T20:23:57.4430711Z CC src/libuv_la-fs-poll.lo 2021-05-16T20:23:58.0277054Z CC src/libuv_la-idna.lo 2021-05-16T20:23:58.6272203Z CC src/libuv_la-inet.lo 2021-05-16T20:23:59.2429004Z CC src/libuv_la-random.lo 2021-05-16T20:23:59.7354171Z CC src/libuv_la-strscpy.lo 2021-05-16T20:24:00.2004126Z CC src/libuv_la-threadpool.lo 2021-05-16T20:24:00.8263883Z CC src/libuv_la-timer.lo 2021-05-16T20:24:01.4145651Z CC src/libuv_la-uv-data-getter-setters.lo 2021-05-16T20:24:01.9212318Z CC src/libuv_la-uv-common.lo 2021-05-16T20:24:02.9383598Z CC src/libuv_la-version.lo 2021-05-16T20:24:03.4007802Z CC src/unix/libuv_la-async.lo 2021-05-16T20:24:03.9739344Z CC src/unix/libuv_la-core.lo 2021-05-16T20:24:05.0508822Z CC src/unix/libuv_la-dl.lo 2021-05-16T20:24:05.5431591Z CC src/unix/libuv_la-fs.lo 2021-05-16T20:24:06.9673306Z CC src/unix/libuv_la-getaddrinfo.lo 2021-05-16T20:24:07.5379030Z CC src/unix/libuv_la-getnameinfo.lo 2021-05-16T20:24:08.0441164Z CC src/unix/libuv_la-loop-watcher.lo 2021-05-16T20:24:08.6323722Z CC src/unix/libuv_la-loop.lo 2021-05-16T20:24:09.1825411Z CC src/unix/libuv_la-pipe.lo 2021-05-16T20:24:09.7861571Z CC src/unix/libuv_la-poll.lo 2021-05-16T20:24:10.3260511Z CC src/unix/libuv_la-process.lo 2021-05-16T20:24:11.0546217Z CC src/unix/libuv_la-random-devurandom.lo 2021-05-16T20:24:11.5668641Z CC src/unix/libuv_la-signal.lo 2021-05-16T20:24:12.4292953Z CC src/unix/libuv_la-stream.lo 2021-05-16T20:24:13.4354785Z CC src/unix/libuv_la-tcp.lo 2021-05-16T20:24:14.0666452Z CC src/unix/libuv_la-thread.lo 2021-05-16T20:24:14.7550036Z CC src/unix/libuv_la-tty.lo 2021-05-16T20:24:15.3316439Z CC src/unix/libuv_la-udp.lo 2021-05-16T20:24:16.3285900Z CC src/unix/libuv_la-linux-core.lo 2021-05-16T20:24:17.2609268Z CC src/unix/libuv_la-linux-inotify.lo 2021-05-16T20:24:18.0421605Z CC src/unix/libuv_la-linux-syscalls.lo 2021-05-16T20:24:18.4803809Z CC src/unix/libuv_la-procfs-exepath.lo 2021-05-16T20:24:18.9703749Z CC src/unix/libuv_la-proctitle.lo 2021-05-16T20:24:19.4896675Z CC src/unix/libuv_la-random-getrandom.lo 2021-05-16T20:24:19.9727133Z CC src/unix/libuv_la-random-sysctl-linux.lo 2021-05-16T20:24:20.4739141Z CC src/unix/libuv_la-sysinfo-loadavg.lo 2021-05-16T20:24:20.9512050Z CCLD libuv.la 2021-05-16T20:24:21.1482428Z ar: `u' modifier ignored since `D' is the default (see `U') 2021-05-16T20:24:21.1779451Z make[1]: Leaving directory '/tmp/RtmpbHTCBy/R.INSTALLdca81617b87b/httpuv/src/libuv' 2021-05-16T20:24:21.1782300Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c http-parser/http_parser.c -o http-parser/http_parser.o 2021-05-16T20:24:21.7446576Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c sha1/sha1.c -o sha1/sha1.o 2021-05-16T20:24:21.9259203Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c base64/base64.cpp -o base64/base64.o 2021-05-16T20:24:22.1244158Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o httpuv.so RcppExports-legacy.o RcppExports.o callback.o callbackqueue.o filedatasource-unix.o filedatasource-win.o fs.o http.o httprequest.o httpresponse.o httpuv.o md5.o mime.o set_invalid_parameter.o socket.o staticpath.o thread.o timegm.o utils.o uvutil.o webapplication.o websockets-base.o websockets-hixie76.o websockets-hybi03.o websockets-ietf.o websockets.o winutils.o ./libuv/.libs/libuv.a ./http-parser/http_parser.o ./sha1/sha1.o ./base64/base64.o -pthread -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:24:22.4277350Z installing to /home/runner/work/_temp/Library/00LOCK-httpuv/00new/httpuv/libs 2021-05-16T20:24:22.4474519Z ** R 2021-05-16T20:24:22.4548206Z ** demo 2021-05-16T20:24:22.4555422Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:24:24.7790770Z ** help 2021-05-16T20:24:24.8441263Z *** installing help indices 2021-05-16T20:24:24.8865293Z ** building package indices 2021-05-16T20:24:25.1019329Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:24:25.3828511Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:24:25.4090593Z ** testing if installed package can be loaded from final location 2021-05-16T20:24:25.7181659Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:24:25.7206351Z * DONE (httpuv) 2021-05-16T20:24:26.6609405Z * installing *source* package ‘shiny’ ... 2021-05-16T20:24:26.6969418Z ** package ‘shiny’ successfully unpacked and MD5 sums checked 2021-05-16T20:24:26.6970186Z ** using staged installation 2021-05-16T20:24:26.7294539Z ** R 2021-05-16T20:24:26.8049371Z ** inst 2021-05-16T20:24:26.8286306Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:24:42.0443281Z ** help 2021-05-16T20:24:42.6706151Z *** installing help indices 2021-05-16T20:24:42.9479376Z *** copying figures 2021-05-16T20:24:42.9485928Z ** building package indices 2021-05-16T20:24:43.4876144Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:24:43.8365408Z ** testing if installed package can be loaded from final location 2021-05-16T20:24:44.6023058Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:24:44.6185786Z * DONE (shiny) 2021-05-16T20:24:44.8284789Z * installing *source* package ‘miniUI’ ... 2021-05-16T20:24:44.8294418Z ** package ‘miniUI’ successfully unpacked and MD5 sums checked 2021-05-16T20:24:44.8295458Z ** using staged installation 2021-05-16T20:24:44.8422539Z ** R 2021-05-16T20:24:44.8451653Z ** inst 2021-05-16T20:24:44.8459382Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:24:45.2973121Z ** help 2021-05-16T20:24:45.3211585Z *** installing help indices 2021-05-16T20:24:45.3392226Z ** building package indices 2021-05-16T20:24:45.5222676Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:24:45.8685141Z ** testing if installed package can be loaded from final location 2021-05-16T20:24:46.2186561Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:24:46.2192142Z * DONE (miniUI) 2021-05-16T20:24:46.6209411Z * installing *source* package ‘manipulateWidget’ ... 2021-05-16T20:24:46.6329449Z ** package ‘manipulateWidget’ successfully unpacked and MD5 sums checked 2021-05-16T20:24:46.6330755Z ** using staged installation 2021-05-16T20:24:46.6500541Z ** R 2021-05-16T20:24:46.6606717Z ** inst 2021-05-16T20:24:46.6654354Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:24:48.0775586Z ** help 2021-05-16T20:24:48.1438555Z *** installing help indices 2021-05-16T20:24:48.1894211Z ** building package indices 2021-05-16T20:24:48.4053596Z ** installing vignettes 2021-05-16T20:24:48.4116563Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:24:48.7885737Z ** testing if installed package can be loaded from final location 2021-05-16T20:24:49.1888517Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:24:49.1919046Z * DONE (manipulateWidget) 2021-05-16T20:24:49.9414348Z * installing *source* package ‘rgl’ ... 2021-05-16T20:24:49.9700504Z ** package ‘rgl’ successfully unpacked and MD5 sums checked 2021-05-16T20:24:49.9701660Z ** using staged installation 2021-05-16T20:24:50.1279231Z checking for gcc... gcc 2021-05-16T20:24:50.1852979Z checking whether the C compiler works... yes 2021-05-16T20:24:50.1853919Z checking for C compiler default output file name... a.out 2021-05-16T20:24:50.2198788Z checking for suffix of executables... 2021-05-16T20:24:50.2627093Z checking whether we are cross compiling... no 2021-05-16T20:24:50.2846617Z checking for suffix of object files... o 2021-05-16T20:24:50.3046337Z checking whether we are using the GNU C compiler... yes 2021-05-16T20:24:50.3239516Z checking whether gcc accepts -g... yes 2021-05-16T20:24:50.3578717Z checking for gcc option to accept ISO C89... none needed 2021-05-16T20:24:50.3778361Z checking how to run the C preprocessor... gcc -E 2021-05-16T20:24:50.3973626Z checking for gcc... (cached) gcc 2021-05-16T20:24:50.4186321Z checking whether we are using the GNU C compiler... (cached) yes 2021-05-16T20:24:50.4190753Z checking whether gcc accepts -g... (cached) yes 2021-05-16T20:24:50.4191658Z checking for gcc option to accept ISO C89... (cached) none needed 2021-05-16T20:24:50.4213048Z checking for libpng-config... yes 2021-05-16T20:24:50.4213832Z configure: using libpng-config 2021-05-16T20:24:50.4844943Z configure: using libpng dynamic linkage 2021-05-16T20:24:50.6544029Z checking for X... libraries , headers 2021-05-16T20:24:50.6961173Z checking for XAllocClassHint... yes 2021-05-16T20:24:50.7528122Z checking GL/gl.h usability... yes 2021-05-16T20:24:50.7789124Z checking GL/gl.h presence... yes 2021-05-16T20:24:50.7789833Z checking for GL/gl.h... yes 2021-05-16T20:24:50.8391065Z checking GL/glu.h usability... yes 2021-05-16T20:24:50.8654507Z checking GL/glu.h presence... yes 2021-05-16T20:24:50.8655510Z checking for GL/glu.h... yes 2021-05-16T20:24:50.9195826Z checking for glEnd in -lGL... yes 2021-05-16T20:24:50.9720137Z checking for glEnd... yes 2021-05-16T20:24:51.0475490Z checking for gluErrorString in -lGLU... yes 2021-05-16T20:24:51.1250280Z checking for gluErrorString... yes 2021-05-16T20:24:51.1258631Z checking for pkg-config... yes 2021-05-16T20:24:51.1523190Z configure: using Freetype and FTGL 2021-05-16T20:24:51.1706902Z configure: creating ./config.status 2021-05-16T20:24:51.2445417Z config.status: creating R/noOpenGL.R 2021-05-16T20:24:51.2601954Z config.status: creating src/useNULL/Makevars 2021-05-16T20:24:51.2751195Z config.status: creating src/Makevars 2021-05-16T20:24:51.3337340Z ** libs 2021-05-16T20:24:51.3405235Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c ABCLineSet.cpp -o ABCLineSet.o 2021-05-16T20:24:51.8503026Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c BBoxDeco.cpp -o BBoxDeco.o 2021-05-16T20:24:52.6006275Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Background.cpp -o Background.o 2021-05-16T20:24:53.0754491Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c ClipPlane.cpp -o ClipPlane.o 2021-05-16T20:24:53.5436208Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Color.cpp -o Color.o 2021-05-16T20:24:53.7176290Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Disposable.cpp -o Disposable.o 2021-05-16T20:24:53.9485092Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Light.cpp -o Light.o 2021-05-16T20:24:54.1113852Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c LineSet.cpp -o LineSet.o 2021-05-16T20:24:54.4708267Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c LineStripSet.cpp -o LineStripSet.o 2021-05-16T20:24:54.8302614Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Material.cpp -o Material.o 2021-05-16T20:24:55.0113975Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c NULLgui.cpp -o NULLgui.o 2021-05-16T20:24:55.3793547Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c PlaneSet.cpp -o PlaneSet.o 2021-05-16T20:24:55.9597590Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c PointSet.cpp -o PointSet.o 2021-05-16T20:24:56.3193687Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c PrimitiveSet.cpp -o PrimitiveSet.o 2021-05-16T20:24:56.8117491Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c RenderContext.cpp -o RenderContext.o 2021-05-16T20:24:57.1045825Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Shape.cpp -o Shape.o 2021-05-16T20:24:57.5250744Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c SphereMesh.cpp -o SphereMesh.o 2021-05-16T20:24:57.9369191Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c SphereSet.cpp -o SphereSet.o 2021-05-16T20:24:58.4122771Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c SpriteSet.cpp -o SpriteSet.o 2021-05-16T20:24:59.0162555Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c String.cpp -o String.o 2021-05-16T20:24:59.0943028Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Surface.cpp -o Surface.o 2021-05-16T20:24:59.5938363Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c TextSet.cpp -o TextSet.o 2021-05-16T20:25:00.0873013Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Texture.cpp -o Texture.o 2021-05-16T20:25:00.2830325Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Viewpoint.cpp -o Viewpoint.o 2021-05-16T20:25:00.7597880Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c api.cpp -o api.o 2021-05-16T20:25:01.7276866Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c assert.cpp -o assert.o 2021-05-16T20:25:01.8045219Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c callbacks.cpp -o callbacks.o 2021-05-16T20:25:02.2735259Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c device.cpp -o device.o 2021-05-16T20:25:02.7278887Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c devicemanager.cpp -o devicemanager.o 2021-05-16T20:25:03.3211717Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c fps.cpp -o fps.o 2021-05-16T20:25:03.7023723Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c ftgl.cpp -o ftgl.o 2021-05-16T20:25:04.9533239Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c geom.cpp -o geom.o 2021-05-16T20:25:05.0948436Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c gl2ps.c -o gl2ps.o 2021-05-16T20:25:06.6785239Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c glErrors.cpp -o glErrors.o 2021-05-16T20:25:06.8121888Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c glgui.cpp -o glgui.o 2021-05-16T20:25:07.2835097Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c gui.cpp -o gui.o 2021-05-16T20:25:07.6578273Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c init.cpp -o init.o 2021-05-16T20:25:08.1042297Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c par3d.cpp -o par3d.o 2021-05-16T20:25:08.7457244Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c pixmap.cpp -o pixmap.o 2021-05-16T20:25:08.9817594Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c platform.cpp -o platform.o 2021-05-16T20:25:09.0475041Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c pretty.c -o pretty.o 2021-05-16T20:25:09.1107339Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c render.cpp -o render.o 2021-05-16T20:25:09.2888528Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c rglmath.cpp -o rglmath.o 2021-05-16T20:25:09.4921177Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c rglview.cpp -o rglview.o 2021-05-16T20:25:10.1156429Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c scene.cpp -o scene.o 2021-05-16T20:25:10.7946478Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c select.cpp -o select.o 2021-05-16T20:25:11.1504558Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c subscene.cpp -o subscene.o 2021-05-16T20:25:12.6887281Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c win32gui.cpp -o win32gui.o 2021-05-16T20:25:12.7037602Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c win32lib.cpp -o win32lib.o 2021-05-16T20:25:12.7174917Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c x11gui.cpp -o x11gui.o 2021-05-16T20:25:13.5783768Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c x11lib.cpp -o x11lib.o 2021-05-16T20:25:13.9878680Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rgl.so ABCLineSet.o BBoxDeco.o Background.o ClipPlane.o Color.o Disposable.o Light.o LineSet.o LineStripSet.o Material.o NULLgui.o PlaneSet.o PointSet.o PrimitiveSet.o RenderContext.o Shape.o SphereMesh.o SphereSet.o SpriteSet.o String.o Surface.o TextSet.o Texture.o Viewpoint.o api.o assert.o callbacks.o device.o devicemanager.o fps.o ftgl.o geom.o gl2ps.o glErrors.o glgui.o gui.o init.o par3d.o pixmap.o platform.o pretty.o render.o rglmath.o rglview.o scene.o select.o subscene.o win32gui.o win32lib.o x11gui.o x11lib.o -lGLU -lGL -lpng16 -lX11 -lfreetype -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:25:14.1290092Z cp -Rp OpenGL useNULL && \ 2021-05-16T20:25:14.1291403Z cp -p *.c *.h *.cpp useNULL/ && \ 2021-05-16T20:25:14.1292143Z cd useNULL && \ 2021-05-16T20:25:14.1296780Z /opt/R/devel/lib/R/bin/R CMD SHLIB -o useNULL.so *.cpp *.c && \ 2021-05-16T20:25:14.1297326Z cd .. && \ 2021-05-16T20:25:14.1297951Z mkdir -p ../inst/useNULL && \ 2021-05-16T20:25:14.1298610Z mv useNULL/useNULL.so ../inst/useNULL/rgl.so && \ 2021-05-16T20:25:14.1299409Z rm useNULL/*.cpp useNULL/*.c useNULL/*.h useNULL/OpenGL/* 2021-05-16T20:25:14.2004915Z make[1]: Entering directory '/tmp/RtmpPJ7g3J/R.INSTALL11d09452e86b5/rgl/src/useNULL' 2021-05-16T20:25:14.2007183Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c ABCLineSet.cpp -o ABCLineSet.o 2021-05-16T20:25:14.6420442Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c BBoxDeco.cpp -o BBoxDeco.o 2021-05-16T20:25:15.1018886Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Background.cpp -o Background.o 2021-05-16T20:25:15.4952432Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c ClipPlane.cpp -o ClipPlane.o 2021-05-16T20:25:15.8846026Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Color.cpp -o Color.o 2021-05-16T20:25:16.0005638Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Disposable.cpp -o Disposable.o 2021-05-16T20:25:16.2300210Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Light.cpp -o Light.o 2021-05-16T20:25:16.3373258Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c LineSet.cpp -o LineSet.o 2021-05-16T20:25:16.6455665Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c LineStripSet.cpp -o LineStripSet.o 2021-05-16T20:25:16.9530262Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Material.cpp -o Material.o 2021-05-16T20:25:17.0514853Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c NULLgui.cpp -o NULLgui.o 2021-05-16T20:25:17.3587054Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c PlaneSet.cpp -o PlaneSet.o 2021-05-16T20:25:17.8826122Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c PointSet.cpp -o PointSet.o 2021-05-16T20:25:18.1882132Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c PrimitiveSet.cpp -o PrimitiveSet.o 2021-05-16T20:25:18.6058627Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c RenderContext.cpp -o RenderContext.o 2021-05-16T20:25:18.8419871Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Shape.cpp -o Shape.o 2021-05-16T20:25:19.2007657Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c SphereMesh.cpp -o SphereMesh.o 2021-05-16T20:25:19.5391422Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c SphereSet.cpp -o SphereSet.o 2021-05-16T20:25:19.9525778Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c SpriteSet.cpp -o SpriteSet.o 2021-05-16T20:25:20.4636187Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c String.cpp -o String.o 2021-05-16T20:25:20.5414138Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Surface.cpp -o Surface.o 2021-05-16T20:25:20.9584074Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c TextSet.cpp -o TextSet.o 2021-05-16T20:25:21.2459502Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Texture.cpp -o Texture.o 2021-05-16T20:25:21.3544213Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Viewpoint.cpp -o Viewpoint.o 2021-05-16T20:25:21.7512302Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c api.cpp -o api.o 2021-05-16T20:25:22.6395840Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c assert.cpp -o assert.o 2021-05-16T20:25:22.7154568Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c callbacks.cpp -o callbacks.o 2021-05-16T20:25:23.1103922Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c device.cpp -o device.o 2021-05-16T20:25:23.4993353Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c devicemanager.cpp -o devicemanager.o 2021-05-16T20:25:24.0146608Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c fps.cpp -o fps.o 2021-05-16T20:25:24.3129195Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c ftgl.cpp -o ftgl.o 2021-05-16T20:25:24.3269663Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c geom.cpp -o geom.o 2021-05-16T20:25:24.4679569Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c glErrors.cpp -o glErrors.o 2021-05-16T20:25:24.5446616Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c glgui.cpp -o glgui.o 2021-05-16T20:25:24.8648899Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c gui.cpp -o gui.o 2021-05-16T20:25:25.1650576Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c init.cpp -o init.o 2021-05-16T20:25:25.5327733Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c par3d.cpp -o par3d.o 2021-05-16T20:25:26.0869185Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c pixmap.cpp -o pixmap.o 2021-05-16T20:25:26.2506123Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c platform.cpp -o platform.o 2021-05-16T20:25:26.2673794Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c render.cpp -o render.o 2021-05-16T20:25:26.3879380Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c rglmath.cpp -o rglmath.o 2021-05-16T20:25:26.5906358Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c rglview.cpp -o rglview.o 2021-05-16T20:25:27.1053072Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c scene.cpp -o scene.o 2021-05-16T20:25:27.7295549Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c select.cpp -o select.o 2021-05-16T20:25:28.0259321Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c subscene.cpp -o subscene.o 2021-05-16T20:25:29.4545990Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c win32gui.cpp -o win32gui.o 2021-05-16T20:25:29.4698314Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c win32lib.cpp -o win32lib.o 2021-05-16T20:25:29.4839203Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c x11gui.cpp -o x11gui.o 2021-05-16T20:25:29.4973976Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c x11lib.cpp -o x11lib.o 2021-05-16T20:25:29.5105768Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c gl2ps.c -o gl2ps.o 2021-05-16T20:25:29.5257214Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c pretty.c -o pretty.o 2021-05-16T20:25:29.5899780Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o useNULL.so ABCLineSet.o BBoxDeco.o Background.o ClipPlane.o Color.o Disposable.o Light.o LineSet.o LineStripSet.o Material.o NULLgui.o PlaneSet.o PointSet.o PrimitiveSet.o RenderContext.o Shape.o SphereMesh.o SphereSet.o SpriteSet.o String.o Surface.o TextSet.o Texture.o Viewpoint.o api.o assert.o callbacks.o device.o devicemanager.o fps.o ftgl.o geom.o glErrors.o glgui.o gui.o init.o par3d.o pixmap.o platform.o render.o rglmath.o rglview.o scene.o select.o subscene.o win32gui.o win32lib.o x11gui.o x11lib.o gl2ps.o pretty.o -lpng16 -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:25:29.7039267Z make[1]: Leaving directory '/tmp/RtmpPJ7g3J/R.INSTALL11d09452e86b5/rgl/src/useNULL' 2021-05-16T20:25:29.7139635Z installing to /home/runner/work/_temp/Library/00LOCK-rgl/00new/rgl/libs 2021-05-16T20:25:29.7193418Z ** R 2021-05-16T20:25:29.7703356Z ** demo 2021-05-16T20:25:29.7715352Z ** inst 2021-05-16T20:25:29.7844313Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:25:36.6213126Z ** help 2021-05-16T20:25:37.1102727Z *** installing help indices 2021-05-16T20:25:37.3521936Z *** copying figures 2021-05-16T20:25:37.3522617Z ** building package indices 2021-05-16T20:25:37.7523761Z ** installing vignettes 2021-05-16T20:25:37.7611117Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:25:38.1984355Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:25:38.2278870Z ** testing if installed package can be loaded from final location 2021-05-16T20:25:38.9092985Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:25:38.9166953Z * DONE (rgl) 2021-05-16T20:25:38.9413715Z 2021-05-16T20:25:38.9414857Z The downloaded source packages are in 2021-05-16T20:25:39.1134594Z ‘/tmp/Rtmp7t0BTN/downloaded_packages’ 2021-05-16T20:25:39.1135161Z 2021-05-16T20:25:39.1143042Z checking for file ‘/tmp/Rtmp7t0BTN/remotesd55525de3a95/neuroconductor-brainR-30deb98/DESCRIPTION’ ... 2021-05-16T20:25:39.1174961Z 2021-05-16T20:25:39.1176628Z ✔ checking for file ‘/tmp/Rtmp7t0BTN/remotesd55525de3a95/neuroconductor-brainR-30deb98/DESCRIPTION’ 2021-05-16T20:25:39.1292813Z 2021-05-16T20:25:39.1310928Z 2021-05-16T20:25:39.1312771Z ─ preparing ‘brainR’: 2021-05-16T20:25:39.1322107Z 2021-05-16T20:25:39.1324010Z 2021-05-16T20:25:39.1380744Z checking DESCRIPTION meta-information ... 2021-05-16T20:25:39.1404596Z 2021-05-16T20:25:39.1406490Z ✔ checking DESCRIPTION meta-information 2021-05-16T20:25:39.1656035Z 2021-05-16T20:25:39.1682203Z 2021-05-16T20:25:39.1684705Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-16T20:25:39.1693598Z 2021-05-16T20:25:39.1715363Z 2021-05-16T20:25:39.1717277Z ─ checking for empty or unneeded directories 2021-05-16T20:25:39.1720032Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-16T20:25:39.1743331Z 2021-05-16T20:25:39.1764294Z 2021-05-16T20:25:39.1766072Z ─ building ‘brainR_1.6.0.tar.gz’ 2021-05-16T20:25:39.4672960Z 2021-05-16T20:25:39.4673454Z 2021-05-16T20:25:39.4673750Z 2021-05-16T20:25:39.4799647Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:25:39.4800434Z (as ‘lib’ is unspecified) 2021-05-16T20:25:39.8300850Z * installing *source* package ‘brainR’ ... 2021-05-16T20:25:39.8303362Z ** using staged installation 2021-05-16T20:25:39.8443017Z ** R 2021-05-16T20:25:39.8494539Z ** inst 2021-05-16T20:25:39.8555933Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:25:41.2247474Z 2021-05-16T20:25:41.2249022Z ** help 2021-05-16T20:25:41.2249507Z Warning message: 2021-05-16T20:25:41.2250385Z no DISPLAY variable so Tk is not available 2021-05-16T20:25:41.2463297Z *** installing help indices 2021-05-16T20:25:41.2672883Z ** building package indices 2021-05-16T20:25:41.4534152Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:25:42.3111407Z ##[warning]Warning: no DISPLAY variable so Tk is not available 2021-05-16T20:25:42.3139984Z ** testing if installed package can be loaded from final location 2021-05-16T20:25:43.1783453Z ##[warning]Warning: no DISPLAY variable so Tk is not available 2021-05-16T20:25:43.1786583Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:25:43.1793995Z * DONE (brainR) 2021-05-16T20:25:43.1892722Z Installing 38 packages: abind, bitops, jquerylib, sass, bslib, promises, later, sourcetools, xtable, httpuv, webshot, miniUI, base64enc, manipulateWidget, crosstalk, shiny, htmltools, htmlwidgets, colorspace, viridisLite, RColorBrewer, munsell, labeling, farver, R.methodsS3, misc3d, rgl, plyr, tinytex, scales, isoband, gtable, R.oo, reshape2, rmarkdown, ggplot2, R.utils, matrixStats 2021-05-16T20:25:43.1898207Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T20:25:43.1899181Z (as ‘lib’ is unspecified) 2021-05-16T20:25:57.4586829Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/abind_1.4-5.tar.gz' 2021-05-16T20:25:57.9742138Z Content type 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2021-05-16T20:25:58.9937636Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sass_0.4.0.tar.gz' 2021-05-16T20:25:59.5294926Z Content type 'binary/octet-stream' length 3023602 bytes (2.9 MB) 2021-05-16T20:25:59.6102053Z ================================================== 2021-05-16T20:25:59.6103026Z downloaded 2.9 MB 2021-05-16T20:25:59.6103546Z 2021-05-16T20:25:59.6155093Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bslib_0.2.5.tar.gz' 2021-05-16T20:26:00.1216722Z Content type 'binary/octet-stream' length 3810957 bytes (3.6 MB) 2021-05-16T20:26:00.1867121Z ================================================== 2021-05-16T20:26:00.1867924Z downloaded 3.6 MB 2021-05-16T20:26:00.1868463Z 2021-05-16T20:26:00.1920639Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/promises_1.2.0.1.tar.gz' 2021-05-16T20:26:00.6061592Z Content type 'binary/octet-stream' length 3137334 bytes 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xtable_1.8-4.tar.gz' 2021-05-16T20:26:01.7787113Z Content type 'application/x-tar' length 565474 bytes (552 KB) 2021-05-16T20:26:01.8031723Z ================================================== 2021-05-16T20:26:01.8032249Z downloaded 552 KB 2021-05-16T20:26:01.8032526Z 2021-05-16T20:26:01.8081555Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/httpuv_1.6.1.tar.gz' 2021-05-16T20:26:02.2507334Z Content type 'binary/octet-stream' length 1821315 bytes (1.7 MB) 2021-05-16T20:26:02.2902542Z ================================================== 2021-05-16T20:26:02.2904617Z downloaded 1.7 MB 2021-05-16T20:26:02.2905960Z 2021-05-16T20:26:02.2951566Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/webshot_0.5.2.tar.gz' 2021-05-16T20:26:02.6298957Z Content type 'binary/octet-stream' length 159097 bytes (155 KB) 2021-05-16T20:26:02.6455667Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/manipulateWidget_0.10.1.tar.gz' 2021-05-16T20:26:06.0763596Z Content type 'binary/octet-stream' length 3175142 bytes (3.0 MB) 2021-05-16T20:26:06.1913710Z ================================================== 2021-05-16T20:26:06.1914260Z downloaded 3.0 MB 2021-05-16T20:26:06.1914567Z 2021-05-16T20:26:06.1957610Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/crosstalk_1.1.1.tar.gz' 2021-05-16T20:26:07.0013241Z Content type 'binary/octet-stream' length 676876 bytes (661 KB) 2021-05-16T20:26:07.0261830Z ================================================== 2021-05-16T20:26:07.0262322Z downloaded 661 KB 2021-05-16T20:26:07.0262591Z 2021-05-16T20:26:07.0308139Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/shiny_1.6.0.tar.gz' 2021-05-16T20:26:07.3835804Z Content type 'binary/octet-stream' length 4164395 bytes (4.0 MB) 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/colorspace_2.0-1.tar.gz' 2021-05-16T20:26:10.1509016Z Content type 'binary/octet-stream' length 2191517 bytes (2.1 MB) 2021-05-16T20:26:10.1935311Z ================================================== 2021-05-16T20:26:10.1936260Z downloaded 2.1 MB 2021-05-16T20:26:10.1936717Z 2021-05-16T20:26:10.1975055Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/viridisLite_0.4.0.tar.gz' 2021-05-16T20:26:10.6549776Z Content type 'binary/octet-stream' length 1267617 bytes (1.2 MB) 2021-05-16T20:26:10.7184917Z ================================================== 2021-05-16T20:26:10.7185459Z downloaded 1.2 MB 2021-05-16T20:26:10.7185730Z 2021-05-16T20:26:10.7227587Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/RColorBrewer_1.1-2.tar.gz' 2021-05-16T20:26:11.2298519Z Content type 'application/x-tar' length 11593 bytes (11 KB) 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/farver_2.1.0.tar.gz' 2021-05-16T20:26:12.7592073Z Content type 'binary/octet-stream' length 1278316 bytes (1.2 MB) 2021-05-16T20:26:12.8016564Z ================================================== 2021-05-16T20:26:12.8017071Z downloaded 1.2 MB 2021-05-16T20:26:12.8017363Z 2021-05-16T20:26:12.8058612Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.methodsS3_1.8.1.tar.gz' 2021-05-16T20:26:13.0890712Z Content type 'binary/octet-stream' length 23789 bytes (23 KB) 2021-05-16T20:26:13.0891811Z ================================================== 2021-05-16T20:26:13.0892954Z downloaded 23 KB 2021-05-16T20:26:13.0893354Z 2021-05-16T20:26:13.0935085Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/misc3d_0.9-0.tar.gz' 2021-05-16T20:26:13.4799940Z Content type 'binary/octet-stream' length 67105 bytes (65 KB) 2021-05-16T20:26:13.4860931Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tinytex_0.31.tar.gz' 2021-05-16T20:26:16.6411872Z Content type 'binary/octet-stream' length 29350 bytes (28 KB) 2021-05-16T20:26:16.6412822Z ================================================== 2021-05-16T20:26:16.6413280Z downloaded 28 KB 2021-05-16T20:26:16.6413580Z 2021-05-16T20:26:16.6528461Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/scales_1.1.1.tar.gz' 2021-05-16T20:26:17.2590013Z Content type 'binary/octet-stream' length 514712 bytes (502 KB) 2021-05-16T20:26:17.2844681Z ================================================== 2021-05-16T20:26:17.2845431Z downloaded 502 KB 2021-05-16T20:26:17.2845890Z 2021-05-16T20:26:17.2884640Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/isoband_0.2.4.tar.gz' 2021-05-16T20:26:17.8941483Z Content type 'binary/octet-stream' length 2009788 bytes (1.9 MB) 2021-05-16T20:26:17.9303943Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/reshape2_1.4.4.tar.gz' 2021-05-16T20:26:22.9174562Z Content type 'binary/octet-stream' length 37878 bytes (36 KB) 2021-05-16T20:26:22.9175337Z ================================================== 2021-05-16T20:26:22.9175812Z downloaded 36 KB 2021-05-16T20:26:22.9176114Z 2021-05-16T20:26:22.9225733Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rmarkdown_2.8.tar.gz' 2021-05-16T20:26:23.1621086Z Content type 'binary/octet-stream' length 3236609 bytes (3.1 MB) 2021-05-16T20:26:23.2914116Z ================================================== 2021-05-16T20:26:23.2914758Z downloaded 3.1 MB 2021-05-16T20:26:23.2915068Z 2021-05-16T20:26:23.2965047Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ggplot2_3.3.3.tar.gz' 2021-05-16T20:26:24.5726848Z Content type 'binary/octet-stream' length 3045519 bytes (2.9 MB) 2021-05-16T20:26:24.6223586Z 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2021-05-16T20:26:26.0281982Z ** package ‘abind’ successfully unpacked and MD5 sums checked 2021-05-16T20:26:26.0311864Z ** using staged installation 2021-05-16T20:26:26.0419590Z ** R 2021-05-16T20:26:26.0466381Z ** inst 2021-05-16T20:26:26.0474141Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:26:26.5630362Z ** help 2021-05-16T20:26:26.5876958Z *** installing help indices 2021-05-16T20:26:26.6086525Z ** building package indices 2021-05-16T20:26:26.7962568Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:26:26.9606936Z ** testing if installed package can be loaded from final location 2021-05-16T20:26:27.1350037Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:26:27.1357679Z * DONE (abind) 2021-05-16T20:26:27.3326852Z * installing *source* package ‘bitops’ ... 2021-05-16T20:26:27.3335218Z ** package ‘bitops’ successfully unpacked and MD5 sums checked 2021-05-16T20:26:27.3366408Z ** using staged installation 2021-05-16T20:26:27.3464101Z ** libs 2021-05-16T20:26:27.3510106Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bit-ops.c -o bit-ops.o 2021-05-16T20:26:27.5258971Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cksum.c -o cksum.o 2021-05-16T20:26:27.5835091Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:26:27.6269785Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o bitops.so bit-ops.o cksum.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:26:27.6432249Z installing to /home/runner/work/_temp/Library/00LOCK-bitops/00new/bitops/libs 2021-05-16T20:26:27.6447423Z ** R 2021-05-16T20:26:27.6472214Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:26:27.8584720Z ** help 2021-05-16T20:26:27.8827727Z *** installing help indices 2021-05-16T20:26:27.8997798Z ** building package indices 2021-05-16T20:26:28.0803161Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:26:28.2506143Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:26:28.2678922Z ** testing if installed package can be loaded from final location 2021-05-16T20:26:28.4301651Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:26:28.4306250Z * DONE (bitops) 2021-05-16T20:26:28.6654188Z * installing *source* package ‘later’ ... 2021-05-16T20:26:28.6677320Z ** package ‘later’ successfully unpacked and MD5 sums checked 2021-05-16T20:26:28.6708304Z ** using staged installation 2021-05-16T20:26:28.6724778Z Running configure script 2021-05-16T20:26:28.7341024Z -latomic linker flag not needed. 2021-05-16T20:26:28.7493818Z ** libs 2021-05-16T20:26:28.7549565Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-16T20:26:33.2557844Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c callback_registry.cpp -o callback_registry.o 2021-05-16T20:26:37.9754467Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c debug.cpp -o debug.o 2021-05-16T20:26:38.3094962Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:26:38.3568580Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c later.cpp -o later.o 2021-05-16T20:26:42.8901116Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c later_posix.cpp -o later_posix.o 2021-05-16T20:26:45.8715466Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c later_win32.cpp -o later_win32.o 2021-05-16T20:26:45.8858501Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c timer_posix.cpp -o timer_posix.o 2021-05-16T20:26:46.2720033Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c timestamp_unix.cpp -o timestamp_unix.o 2021-05-16T20:26:46.5536320Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c timestamp_win32.cpp -o timestamp_win32.o 2021-05-16T20:26:46.5681255Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c tinycthread.c -o tinycthread.o 2021-05-16T20:26:46.6474022Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o later.so RcppExports.o callback_registry.o debug.o init.o later.o later_posix.o later_win32.o timer_posix.o timestamp_unix.o timestamp_win32.o tinycthread.o -pthread -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:26:46.7558212Z installing to /home/runner/work/_temp/Library/00LOCK-later/00new/later/libs 2021-05-16T20:26:46.7607649Z ** R 2021-05-16T20:26:46.7641139Z ** inst 2021-05-16T20:26:46.7651608Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:26:47.1062765Z ** help 2021-05-16T20:26:47.1261705Z *** installing help indices 2021-05-16T20:26:47.1468233Z ** building package indices 2021-05-16T20:26:47.3357546Z ** installing vignettes 2021-05-16T20:26:47.3411213Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:26:47.6120031Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:26:47.6314850Z ** testing if installed package can be loaded from final location 2021-05-16T20:26:47.8937463Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:26:47.8943918Z * DONE (later) 2021-05-16T20:26:48.1251833Z * installing *source* package ‘sourcetools’ ... 2021-05-16T20:26:48.1269453Z ** package ‘sourcetools’ successfully unpacked and MD5 sums checked 2021-05-16T20:26:48.1299569Z ** using staged installation 2021-05-16T20:26:48.1398879Z ** libs 2021-05-16T20:26:48.1444612Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fpic -g -O2 -c Reader.cpp -o Reader.o 2021-05-16T20:26:48.9615427Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fpic -g -O2 -c Tokenizer.cpp -o Tokenizer.o 2021-05-16T20:26:50.4753582Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fpic -g -O2 -c sourcetools-init.c -o sourcetools-init.o 2021-05-16T20:26:50.5193611Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o sourcetools.so Reader.o Tokenizer.o sourcetools-init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:26:50.5815058Z installing to /home/runner/work/_temp/Library/00LOCK-sourcetools/00new/sourcetools/libs 2021-05-16T20:26:50.5816303Z ** R 2021-05-16T20:26:50.5838797Z ** inst 2021-05-16T20:26:50.5868728Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:26:50.7883968Z ** help 2021-05-16T20:26:50.7992429Z *** installing help indices 2021-05-16T20:26:50.8138772Z ** building package indices 2021-05-16T20:26:50.9935692Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:26:51.1663087Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:26:51.1844006Z ** testing if installed package can be loaded from final location 2021-05-16T20:26:51.3533671Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:26:51.3544293Z * DONE (sourcetools) 2021-05-16T20:26:51.6071116Z * installing *source* package ‘xtable’ ... 2021-05-16T20:26:51.6100687Z ** package ‘xtable’ successfully unpacked and MD5 sums checked 2021-05-16T20:26:51.6129680Z ** using staged installation 2021-05-16T20:26:51.6281125Z ** R 2021-05-16T20:26:51.6367509Z ** data 2021-05-16T20:26:51.6370915Z ** inst 2021-05-16T20:26:51.6389160Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:26:52.4853413Z ** help 2021-05-16T20:26:52.5689133Z *** installing help indices 2021-05-16T20:26:52.6163397Z ** building package indices 2021-05-16T20:26:52.8381287Z ** installing vignettes 2021-05-16T20:26:52.8441167Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:26:53.0103196Z ** testing if installed package can be loaded from final location 2021-05-16T20:26:53.1996937Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:26:53.2010099Z * DONE (xtable) 2021-05-16T20:26:53.4403429Z * installing *source* package ‘webshot’ ... 2021-05-16T20:26:53.4428970Z ** package ‘webshot’ successfully unpacked and MD5 sums checked 2021-05-16T20:26:53.4460131Z ** using staged installation 2021-05-16T20:26:53.4596057Z ** R 2021-05-16T20:26:53.4649083Z ** inst 2021-05-16T20:26:53.4669106Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:26:53.8973098Z ** help 2021-05-16T20:26:53.9198277Z *** installing help indices 2021-05-16T20:26:53.9461540Z ** building package indices 2021-05-16T20:26:54.1327890Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:26:54.3028337Z ** testing if installed package can be loaded from final location 2021-05-16T20:26:54.4717583Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:26:54.4726950Z * DONE (webshot) 2021-05-16T20:26:54.6640420Z * installing *source* package ‘base64enc’ ... 2021-05-16T20:26:54.6647597Z ** package ‘base64enc’ successfully unpacked and MD5 sums checked 2021-05-16T20:26:54.6676124Z ** using staged installation 2021-05-16T20:26:54.6774027Z ** libs 2021-05-16T20:26:54.6820042Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T20:26:54.7863640Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c uriencode.c -o uriencode.o 2021-05-16T20:26:54.8568624Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-16T20:26:54.9256166Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o base64enc.so base64.o uriencode.o utf8.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:26:54.9494733Z installing to /home/runner/work/_temp/Library/00LOCK-base64enc/00new/base64enc/libs 2021-05-16T20:26:54.9495880Z ** R 2021-05-16T20:26:54.9511201Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:26:55.1908179Z ** help 2021-05-16T20:26:55.2129592Z *** installing help indices 2021-05-16T20:26:55.2287421Z ** building package indices 2021-05-16T20:26:55.4082887Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:26:55.5756775Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:26:55.5929000Z ** testing if installed package can be loaded from final location 2021-05-16T20:26:55.7553357Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:26:55.7559041Z * DONE (base64enc) 2021-05-16T20:26:56.1937585Z * installing *source* package ‘colorspace’ ... 2021-05-16T20:26:56.2064954Z ** package ‘colorspace’ successfully unpacked and MD5 sums checked 2021-05-16T20:26:56.2066190Z ** using staged installation 2021-05-16T20:26:56.2238120Z ** libs 2021-05-16T20:26:56.2284316Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colorspace.c -o colorspace.o 2021-05-16T20:26:57.0937722Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:26:57.1386842Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o colorspace.so colorspace.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:26:57.1614492Z installing to /home/runner/work/_temp/Library/00LOCK-colorspace/00new/colorspace/libs 2021-05-16T20:26:57.1643642Z ** R 2021-05-16T20:26:57.1903139Z ** data 2021-05-16T20:26:57.1908367Z *** moving datasets to lazyload DB 2021-05-16T20:26:57.3063934Z ** demo 2021-05-16T20:26:57.3071598Z ** inst 2021-05-16T20:26:57.3176090Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:27:00.6418590Z ** help 2021-05-16T20:27:00.8206118Z *** installing help indices 2021-05-16T20:27:00.9473369Z ** building package indices 2021-05-16T20:27:01.2082841Z ** installing vignettes 2021-05-16T20:27:01.2158209Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:27:01.4318066Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:27:01.4491025Z ** testing if installed package can be loaded from final location 2021-05-16T20:27:01.7475602Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:27:01.7531680Z * DONE (colorspace) 2021-05-16T20:27:02.0017089Z * installing *source* package ‘viridisLite’ ... 2021-05-16T20:27:02.0054863Z ** package ‘viridisLite’ successfully unpacked and MD5 sums checked 2021-05-16T20:27:02.0056007Z ** using staged installation 2021-05-16T20:27:02.0184858Z ** R 2021-05-16T20:27:02.0271068Z ** inst 2021-05-16T20:27:02.0278092Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:27:02.2716534Z ** help 2021-05-16T20:27:02.2896896Z *** installing help indices 2021-05-16T20:27:02.3058873Z *** copying figures 2021-05-16T20:27:02.3076679Z ** building package indices 2021-05-16T20:27:02.4906573Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:27:02.6573686Z ** testing if installed package can be loaded from final location 2021-05-16T20:27:02.8211393Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:27:02.8218738Z * DONE (viridisLite) 2021-05-16T20:27:03.0131978Z * installing *source* package ‘RColorBrewer’ ... 2021-05-16T20:27:03.0138994Z ** package ‘RColorBrewer’ successfully unpacked and MD5 sums checked 2021-05-16T20:27:03.0140098Z ** using staged installation 2021-05-16T20:27:03.0254986Z ** R 2021-05-16T20:27:03.0333072Z ** inst 2021-05-16T20:27:03.0339429Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:27:03.7533176Z ** help 2021-05-16T20:27:03.7715351Z *** installing help indices 2021-05-16T20:27:03.7864343Z ** building package indices 2021-05-16T20:27:03.9660201Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:27:04.1314987Z ** testing if installed package can be loaded from final location 2021-05-16T20:27:04.3299083Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:27:04.3308940Z * DONE (RColorBrewer) 2021-05-16T20:27:04.5254940Z * installing *source* package ‘labeling’ ... 2021-05-16T20:27:04.5263333Z ** package ‘labeling’ successfully unpacked and MD5 sums checked 2021-05-16T20:27:04.5264385Z ** using staged installation 2021-05-16T20:27:04.5363643Z ** R 2021-05-16T20:27:04.5413754Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:27:05.0453133Z ** help 2021-05-16T20:27:05.0808131Z *** installing help indices 2021-05-16T20:27:05.1056334Z ** building package indices 2021-05-16T20:27:05.3001802Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:27:05.4664521Z ** testing if installed package can be loaded from final location 2021-05-16T20:27:05.6350278Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:27:05.6357342Z * DONE (labeling) 2021-05-16T20:27:05.9152934Z * installing *source* package ‘farver’ ... 2021-05-16T20:27:05.9202964Z ** package ‘farver’ successfully unpacked and MD5 sums checked 2021-05-16T20:27:05.9204158Z ** using staged installation 2021-05-16T20:27:05.9322483Z ** libs 2021-05-16T20:27:05.9376265Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c ColorSpace.cpp -o ColorSpace.o 2021-05-16T20:27:06.3110387Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Comparison.cpp -o Comparison.o 2021-05-16T20:27:06.4664612Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Conversion.cpp -o Conversion.o 2021-05-16T20:27:06.8598380Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c encode.cpp -o encode.o 2021-05-16T20:27:11.3511272Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c farver.cpp -o farver.o 2021-05-16T20:27:28.2079692Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.cpp -o init.o 2021-05-16T20:27:28.5550522Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o farver.so ColorSpace.o Comparison.o Conversion.o encode.o farver.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:27:28.6847914Z installing to /home/runner/work/_temp/Library/00LOCK-farver/00new/farver/libs 2021-05-16T20:27:28.6921171Z ** R 2021-05-16T20:27:28.6995865Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:27:28.9983666Z ** help 2021-05-16T20:27:29.0269880Z *** installing help indices 2021-05-16T20:27:29.0549860Z *** copying figures 2021-05-16T20:27:29.0571524Z ** building package indices 2021-05-16T20:27:29.2479128Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:27:29.4224746Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:27:29.4437893Z ** testing if installed package can be loaded from final location 2021-05-16T20:27:29.6120395Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:27:29.6127632Z * DONE (farver) 2021-05-16T20:27:29.8347318Z * installing *source* package ‘R.methodsS3’ ... 2021-05-16T20:27:29.8360812Z ** package ‘R.methodsS3’ successfully unpacked and MD5 sums checked 2021-05-16T20:27:29.8361888Z ** using staged installation 2021-05-16T20:27:29.8475650Z ** R 2021-05-16T20:27:29.8535530Z ** inst 2021-05-16T20:27:29.8542758Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:27:30.3093290Z ** help 2021-05-16T20:27:30.3450170Z *** installing help indices 2021-05-16T20:27:30.3787347Z ** building package indices 2021-05-16T20:27:30.5768794Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:27:30.7467008Z ** testing if installed package can be loaded from final location 2021-05-16T20:27:30.9206087Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:27:30.9215569Z * DONE (R.methodsS3) 2021-05-16T20:27:31.1320172Z * installing *source* package ‘misc3d’ ... 2021-05-16T20:27:31.1335321Z ** package ‘misc3d’ successfully unpacked and MD5 sums checked 2021-05-16T20:27:31.1364396Z ** using staged installation 2021-05-16T20:27:31.1504075Z ** R 2021-05-16T20:27:31.1623789Z ** data 2021-05-16T20:27:31.1627498Z ** demo 2021-05-16T20:27:31.1633046Z ** inst 2021-05-16T20:27:31.1639930Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:27:33.3669691Z ##[warning]Warning: no DISPLAY variable so Tk is not available 2021-05-16T20:27:33.3728770Z ** help 2021-05-16T20:27:33.4128704Z *** installing help indices 2021-05-16T20:27:33.4491159Z ** building package indices 2021-05-16T20:27:33.6629596Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:27:33.8391898Z ##[warning]Warning: no DISPLAY variable so Tk is not available 2021-05-16T20:27:33.8419976Z ** testing if installed package can be loaded from final location 2021-05-16T20:27:34.0427772Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:27:34.0429500Z ##[warning]Warning: no DISPLAY variable so Tk is not available 2021-05-16T20:27:34.0461801Z * DONE (misc3d) 2021-05-16T20:27:34.3595700Z * installing *source* package ‘plyr’ ... 2021-05-16T20:27:34.3647198Z ** package ‘plyr’ successfully unpacked and MD5 sums checked 2021-05-16T20:27:34.3648365Z ** using staged installation 2021-05-16T20:27:34.3783286Z ** libs 2021-05-16T20:27:34.3833567Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-16T20:27:38.3214224Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c loop_apply.c -o loop_apply.o 2021-05-16T20:27:38.3723887Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c split-numeric.cpp -o split-numeric.o 2021-05-16T20:27:41.7609377Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o plyr.so RcppExports.o loop_apply.o split-numeric.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:27:41.8314619Z installing to /home/runner/work/_temp/Library/00LOCK-plyr/00new/plyr/libs 2021-05-16T20:27:41.8340524Z ** R 2021-05-16T20:27:41.8528978Z ** data 2021-05-16T20:27:41.8536208Z *** moving datasets to lazyload DB 2021-05-16T20:27:42.1467394Z ** inst 2021-05-16T20:27:42.1475832Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:27:43.2822400Z ** help 2021-05-16T20:27:43.4676673Z *** installing help indices 2021-05-16T20:27:43.5900721Z ** building package indices 2021-05-16T20:27:43.8862680Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:27:44.1459462Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:27:44.1645100Z ** testing if installed package can be loaded from final location 2021-05-16T20:27:44.4241120Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:27:44.4253060Z * DONE (plyr) 2021-05-16T20:27:44.6333794Z * installing *source* package ‘tinytex’ ... 2021-05-16T20:27:44.6344813Z ** package ‘tinytex’ successfully unpacked and MD5 sums checked 2021-05-16T20:27:44.6373875Z ** using staged installation 2021-05-16T20:27:44.6568316Z ** R 2021-05-16T20:27:44.6635179Z ** inst 2021-05-16T20:27:44.6642420Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:27:45.3012916Z ** help 2021-05-16T20:27:45.3328353Z *** installing help indices 2021-05-16T20:27:45.3591147Z ** building package indices 2021-05-16T20:27:45.5528705Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:27:45.7274557Z ** testing if installed package can be loaded from final location 2021-05-16T20:27:45.9158939Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:27:45.9167940Z * DONE (tinytex) 2021-05-16T20:27:46.2381398Z * installing *source* package ‘isoband’ ... 2021-05-16T20:27:46.2458250Z ** package ‘isoband’ successfully unpacked and MD5 sums checked 2021-05-16T20:27:46.2459438Z ** using staged installation 2021-05-16T20:27:46.2592011Z ** libs 2021-05-16T20:27:46.2645920Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Itestthat -I/usr/local/include -fpic -g -O2 -c clip-lines.cpp -o clip-lines.o 2021-05-16T20:27:46.8946914Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Itestthat -I/usr/local/include -fpic -g -O2 -c init.cpp -o init.o 2021-05-16T20:27:46.9763776Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Itestthat -I/usr/local/include -fpic -g -O2 -c isoband.cpp -o isoband.o 2021-05-16T20:27:48.5965438Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Itestthat -I/usr/local/include -fpic -g -O2 -c polygon.cpp -o polygon.o 2021-05-16T20:27:48.9398483Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Itestthat -I/usr/local/include -fpic -g -O2 -c separate-polygons.cpp -o separate-polygons.o 2021-05-16T20:27:50.2301611Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Itestthat -I/usr/local/include -fpic -g -O2 -c test-clip-lines.cpp -o test-clip-lines.o 2021-05-16T20:27:53.7814682Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Itestthat -I/usr/local/include -fpic -g -O2 -c test-runner.cpp -o test-runner.o 2021-05-16T20:28:09.3572064Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Itestthat -I/usr/local/include -fpic -g -O2 -c test-separate-polygons.cpp -o test-separate-polygons.o 2021-05-16T20:28:12.1677828Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o isoband.so clip-lines.o init.o isoband.o polygon.o separate-polygons.o test-clip-lines.o test-runner.o test-separate-polygons.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:28:12.3592958Z installing to /home/runner/work/_temp/Library/00LOCK-isoband/00new/isoband/libs 2021-05-16T20:28:12.3725698Z ** R 2021-05-16T20:28:12.3780140Z ** inst 2021-05-16T20:28:12.3813716Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:28:12.8201951Z ** help 2021-05-16T20:28:12.8470889Z *** installing help indices 2021-05-16T20:28:12.8752087Z *** copying figures 2021-05-16T20:28:12.8758736Z ** building package indices 2021-05-16T20:28:13.0653271Z ** installing vignettes 2021-05-16T20:28:13.0693922Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:28:13.2570432Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:28:13.2808562Z ** testing if installed package can be loaded from final location 2021-05-16T20:28:13.4625178Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:28:13.4635144Z * DONE (isoband) 2021-05-16T20:28:13.7577619Z * installing *source* package ‘gtable’ ... 2021-05-16T20:28:13.7635530Z ** package ‘gtable’ successfully unpacked and MD5 sums checked 2021-05-16T20:28:13.7636714Z ** using staged installation 2021-05-16T20:28:13.7764806Z ** R 2021-05-16T20:28:13.7831509Z ** inst 2021-05-16T20:28:13.7861023Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:28:14.3424874Z ** help 2021-05-16T20:28:14.3898257Z *** installing help indices 2021-05-16T20:28:14.4278089Z *** copying figures 2021-05-16T20:28:14.4280943Z ** building package indices 2021-05-16T20:28:14.6333165Z ** installing vignettes 2021-05-16T20:28:14.6362376Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:28:14.8116883Z ** testing if installed package can be loaded from final location 2021-05-16T20:28:14.9973796Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:28:14.9982745Z * DONE (gtable) 2021-05-16T20:28:15.4072371Z * installing *source* package ‘matrixStats’ ... 2021-05-16T20:28:15.4166526Z ** package ‘matrixStats’ successfully unpacked and MD5 sums checked 2021-05-16T20:28:15.4167758Z ** using staged installation 2021-05-16T20:28:15.4306168Z ** libs 2021-05-16T20:28:15.4364938Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c 000.init.c -o 000.init.o 2021-05-16T20:28:15.4754520Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c allocMatrix2.c -o allocMatrix2.o 2021-05-16T20:28:15.5522469Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c anyMissing.c -o anyMissing.o 2021-05-16T20:28:15.6496164Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c binCounts.c -o binCounts.o 2021-05-16T20:28:15.7396899Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c binMeans.c -o binMeans.o 2021-05-16T20:28:15.8677986Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colCounts.c -o colCounts.o 2021-05-16T20:28:17.1046826Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colOrderStats.c -o colOrderStats.o 2021-05-16T20:28:17.4427088Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colRanges.c -o colRanges.o 2021-05-16T20:28:18.8078204Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diff2.c -o diff2.o 2021-05-16T20:28:19.0058226Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c indexByRow.c -o indexByRow.o 2021-05-16T20:28:19.0648482Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c logSumExp.c -o logSumExp.o 2021-05-16T20:28:19.2537666Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mean2.c -o mean2.o 2021-05-16T20:28:19.3880500Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c productExpSumLog.c -o productExpSumLog.o 2021-05-16T20:28:19.5294901Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c psortKM.c -o psortKM.o 2021-05-16T20:28:19.5922648Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCounts.c -o rowCounts.o 2021-05-16T20:28:20.9081017Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCummaxs.c -o rowCummaxs.o 2021-05-16T20:28:21.8687778Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCummins.c -o rowCummins.o 2021-05-16T20:28:22.8276588Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCumprods.c -o rowCumprods.o 2021-05-16T20:28:23.6501745Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCumsums.c -o rowCumsums.o 2021-05-16T20:28:24.4641386Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowDiffs.c -o rowDiffs.o 2021-05-16T20:28:26.3421447Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowLogSumExp.c -o rowLogSumExp.o 2021-05-16T20:28:26.4698498Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMads.c -o rowMads.o 2021-05-16T20:28:27.3902549Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMeans2.c -o rowMeans2.o 2021-05-16T20:28:27.9324251Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMedians.c -o rowMedians.o 2021-05-16T20:28:28.7651698Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowOrderStats.c -o rowOrderStats.o 2021-05-16T20:28:29.1500422Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowRanges.c -o rowRanges.o 2021-05-16T20:28:30.6026436Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowRanksWithTies.c -o rowRanksWithTies.o 2021-05-16T20:28:41.8427987Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowSums2.c -o rowSums2.o 2021-05-16T20:28:42.3662362Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowVars.c -o rowVars.o 2021-05-16T20:28:42.9779685Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signTabulate.c -o signTabulate.o 2021-05-16T20:28:43.0921686Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sum2.c -o sum2.o 2021-05-16T20:28:43.1967366Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c validateIndices.c -o validateIndices.o 2021-05-16T20:28:43.4259742Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c weightedMean.c -o weightedMean.o 2021-05-16T20:28:43.5847984Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c weightedMedian.c -o weightedMedian.o 2021-05-16T20:28:43.9781663Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c x_OP_y.c -o x_OP_y.o 2021-05-16T20:29:33.4791841Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o matrixStats.so 000.init.o allocMatrix2.o anyMissing.o binCounts.o binMeans.o colCounts.o colOrderStats.o colRanges.o diff2.o indexByRow.o logSumExp.o mean2.o productExpSumLog.o psortKM.o rowCounts.o rowCummaxs.o rowCummins.o rowCumprods.o rowCumsums.o rowDiffs.o rowLogSumExp.o rowMads.o rowMeans2.o rowMedians.o rowOrderStats.o rowRanges.o rowRanksWithTies.o rowSums2.o rowVars.o signTabulate.o sum2.o validateIndices.o weightedMean.o weightedMedian.o x_OP_y.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:29:33.5631633Z installing to /home/runner/work/_temp/Library/00LOCK-matrixStats/00new/matrixStats/libs 2021-05-16T20:29:33.5750536Z ** R 2021-05-16T20:29:33.5954908Z ** inst 2021-05-16T20:29:33.5999969Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:29:34.8382371Z ** help 2021-05-16T20:29:34.9669065Z *** installing help indices 2021-05-16T20:29:35.0439099Z ** building package indices 2021-05-16T20:29:35.2893448Z ** installing vignettes 2021-05-16T20:29:35.2952281Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:29:35.4673366Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:29:35.4909961Z ** testing if installed package can be loaded from final location 2021-05-16T20:29:35.6773541Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:29:35.6774593Z * DONE (matrixStats) 2021-05-16T20:29:36.0718585Z * installing *source* package ‘promises’ ... 2021-05-16T20:29:36.0828843Z ** package ‘promises’ successfully unpacked and MD5 sums checked 2021-05-16T20:29:36.0859281Z ** using staged installation 2021-05-16T20:29:36.1014545Z ** libs 2021-05-16T20:29:36.1068461Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/later/include' -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-16T20:29:39.9565949Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/later/include' -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c promise_task.cpp -o promise_task.o 2021-05-16T20:29:43.4113041Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o promises.so RcppExports.o promise_task.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:29:43.4814338Z installing to /home/runner/work/_temp/Library/00LOCK-promises/00new/promises/libs 2021-05-16T20:29:43.4833513Z ** R 2021-05-16T20:29:43.4908375Z ** inst 2021-05-16T20:29:43.4945150Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:29:45.2380582Z ** help 2021-05-16T20:29:45.2838426Z *** installing help indices 2021-05-16T20:29:45.3139134Z *** copying figures 2021-05-16T20:29:45.3143542Z ** building package indices 2021-05-16T20:29:45.5079336Z ** installing vignettes 2021-05-16T20:29:45.5174951Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:29:45.7886263Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:29:45.8074194Z ** testing if installed package can be loaded from final location 2021-05-16T20:29:46.1008099Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:29:46.1031324Z * DONE (promises) 2021-05-16T20:29:46.3406052Z * installing *source* package ‘htmltools’ ... 2021-05-16T20:29:46.3427100Z ** package ‘htmltools’ successfully unpacked and MD5 sums checked 2021-05-16T20:29:46.3456791Z ** using staged installation 2021-05-16T20:29:46.3597448Z ** libs 2021-05-16T20:29:46.3640542Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:29:46.4065933Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c template.c -o template.o 2021-05-16T20:29:46.5066698Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o htmltools.so init.o template.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:29:46.5273115Z installing to /home/runner/work/_temp/Library/00LOCK-htmltools/00new/htmltools/libs 2021-05-16T20:29:46.5285713Z ** R 2021-05-16T20:29:46.5410585Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:29:47.8358594Z ** help 2021-05-16T20:29:47.9122179Z *** installing help indices 2021-05-16T20:29:47.9656476Z ** building package indices 2021-05-16T20:29:48.1980631Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:29:48.3884618Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:29:48.4053484Z ** testing if installed package can be loaded from final location 2021-05-16T20:29:48.6164993Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:29:48.6179554Z * DONE (htmltools) 2021-05-16T20:29:48.8490490Z * installing *source* package ‘munsell’ ... 2021-05-16T20:29:48.8510375Z ** package ‘munsell’ successfully unpacked and MD5 sums checked 2021-05-16T20:29:48.8511807Z ** using staged installation 2021-05-16T20:29:48.8608650Z ** R 2021-05-16T20:29:48.8741182Z ** inst 2021-05-16T20:29:48.8750066Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:29:49.3853210Z ** help 2021-05-16T20:29:49.4268169Z *** installing help indices 2021-05-16T20:29:49.4669586Z *** copying figures 2021-05-16T20:29:49.4672998Z ** building package indices 2021-05-16T20:29:49.6786314Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:29:49.8936965Z ** testing if installed package can be loaded from final location 2021-05-16T20:29:50.1213682Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:29:50.1224753Z * DONE (munsell) 2021-05-16T20:29:50.4683132Z * installing *source* package ‘R.oo’ ... 2021-05-16T20:29:50.4752597Z ** package ‘R.oo’ successfully unpacked and MD5 sums checked 2021-05-16T20:29:50.4753717Z ** using staged installation 2021-05-16T20:29:50.4879571Z ** R 2021-05-16T20:29:50.5181875Z ** inst 2021-05-16T20:29:50.5195220Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:29:52.9159661Z ** help 2021-05-16T20:29:53.3833864Z *** installing help indices 2021-05-16T20:29:53.7211041Z ** building package indices 2021-05-16T20:29:54.1533067Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:29:54.3475394Z ** testing if installed package can be loaded from final location 2021-05-16T20:29:54.6205348Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:29:54.6249973Z * DONE (R.oo) 2021-05-16T20:29:54.8470167Z * installing *source* package ‘reshape2’ ... 2021-05-16T20:29:54.8483888Z ** package ‘reshape2’ successfully unpacked and MD5 sums checked 2021-05-16T20:29:54.8484956Z ** using staged installation 2021-05-16T20:29:54.8598021Z ** libs 2021-05-16T20:29:54.8645313Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-16T20:29:58.9288660Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c melt.cpp -o melt.o 2021-05-16T20:30:03.1137037Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o reshape2.so RcppExports.o melt.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:30:03.1895101Z installing to /home/runner/work/_temp/Library/00LOCK-reshape2/00new/reshape2/libs 2021-05-16T20:30:03.1907095Z ** R 2021-05-16T20:30:03.1957100Z ** data 2021-05-16T20:30:03.1960756Z *** moving datasets to lazyload DB 2021-05-16T20:30:03.2064245Z ** inst 2021-05-16T20:30:03.2071662Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:30:03.6866506Z ** help 2021-05-16T20:30:03.7228859Z *** installing help indices 2021-05-16T20:30:03.7579028Z ** building package indices 2021-05-16T20:30:03.9611380Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:30:04.2338784Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:30:04.2525661Z ** testing if installed package can be loaded from final location 2021-05-16T20:30:04.5247215Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:30:04.5255178Z * DONE (reshape2) 2021-05-16T20:30:04.7863413Z * installing *source* package ‘jquerylib’ ... 2021-05-16T20:30:04.7906098Z ** package ‘jquerylib’ successfully unpacked and MD5 sums checked 2021-05-16T20:30:04.7935806Z ** using staged installation 2021-05-16T20:30:04.8089381Z ** R 2021-05-16T20:30:04.8109361Z ** inst 2021-05-16T20:30:04.8139615Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:30:05.0392254Z ** help 2021-05-16T20:30:05.0476256Z *** installing help indices 2021-05-16T20:30:05.0611618Z ** building package indices 2021-05-16T20:30:05.2377437Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:30:05.4271670Z ** testing if installed package can be loaded from final location 2021-05-16T20:30:05.6190457Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:30:05.6216798Z * DONE (jquerylib) 2021-05-16T20:30:06.1697185Z * installing *source* package ‘sass’ ... 2021-05-16T20:30:06.1871795Z ** package ‘sass’ successfully unpacked and MD5 sums checked 2021-05-16T20:30:06.1902938Z ** using staged installation 2021-05-16T20:30:06.2069036Z ** libs 2021-05-16T20:30:06.2113605Z /opt/R/devel/lib/R/share/make/shlib.mk:18: warning: overriding recipe for target 'shlib-clean' 2021-05-16T20:30:06.2114946Z Makevars:12: warning: ignoring old recipe for target 'shlib-clean' 2021-05-16T20:30:06.2122759Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libsass/include -I/usr/local/include -fpic -g -O2 -c compile.c -o compile.o 2021-05-16T20:30:06.2923397Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libsass/include -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T20:30:06.3278408Z MAKEFLAGS= CC="gcc" CFLAGS="-g -O2 " CXX="g++ -std=gnu++14" AR="ar" LDFLAGS="-L/usr/local/lib" make -C libsass 2021-05-16T20:30:06.3303747Z make[1]: Entering directory '/tmp/RtmpKmojR4/R.INSTALL1299b507e27c7/sass/src/libsass' 2021-05-16T20:30:06.3351222Z gcc -g -O2 -O2 -I ./include -fPIC -c -o src/cencode.o src/cencode.c 2021-05-16T20:30:06.3705710Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast.o src/ast.cpp 2021-05-16T20:30:09.5796564Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_values.o src/ast_values.cpp 2021-05-16T20:30:12.6013361Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_supports.o src/ast_supports.cpp 2021-05-16T20:30:13.7472738Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_cmp.o src/ast_sel_cmp.cpp 2021-05-16T20:30:14.9875954Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_unify.o src/ast_sel_unify.cpp 2021-05-16T20:30:16.5816101Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_super.o src/ast_sel_super.cpp 2021-05-16T20:30:18.0864638Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_weave.o src/ast_sel_weave.cpp 2021-05-16T20:30:20.8376275Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_selectors.o src/ast_selectors.cpp 2021-05-16T20:30:24.1865960Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/context.o src/context.cpp 2021-05-16T20:30:28.1165208Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/constants.o src/constants.cpp 2021-05-16T20:30:28.4310195Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_utils.o src/fn_utils.cpp 2021-05-16T20:30:30.0062114Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_miscs.o src/fn_miscs.cpp 2021-05-16T20:30:32.0934783Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_maps.o src/fn_maps.cpp 2021-05-16T20:30:33.7396039Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_lists.o src/fn_lists.cpp 2021-05-16T20:30:36.1985466Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_colors.o src/fn_colors.cpp 2021-05-16T20:30:38.6807065Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_numbers.o src/fn_numbers.cpp 2021-05-16T20:30:40.4316337Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_strings.o src/fn_strings.cpp 2021-05-16T20:30:42.0408944Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_selectors.o src/fn_selectors.cpp 2021-05-16T20:30:43.8572162Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/color_maps.o src/color_maps.cpp 2021-05-16T20:30:45.8169768Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/environment.o src/environment.cpp 2021-05-16T20:30:46.9431714Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_fwd_decl.o src/ast_fwd_decl.cpp 2021-05-16T20:30:47.8240286Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/bind.o src/bind.cpp 2021-05-16T20:30:50.0523581Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/file.o src/file.cpp 2021-05-16T20:30:51.7985566Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/util.o src/util.cpp 2021-05-16T20:30:53.1259010Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/util_string.o src/util_string.cpp 2021-05-16T20:30:53.5459955Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/json.o src/json.cpp 2021-05-16T20:30:54.0599438Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/units.o src/units.cpp 2021-05-16T20:30:55.0908540Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/values.o src/values.cpp 2021-05-16T20:30:57.0838057Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/plugins.o src/plugins.cpp 2021-05-16T20:30:57.0849762Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/source.o src/source.cpp 2021-05-16T20:30:57.1989029Z g++ 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-Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/check_nesting.o src/check_nesting.cpp 2021-05-16T20:31:35.6333369Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/remove_placeholders.o src/remove_placeholders.cpp 2021-05-16T20:31:36.8667553Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass.o src/sass.cpp 2021-05-16T20:31:38.0391787Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_values.o src/sass_values.cpp 2021-05-16T20:31:39.1287033Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_context.o src/sass_context.cpp 2021-05-16T20:31:40.4787164Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_functions.o src/sass_functions.cpp 2021-05-16T20:31:41.4446875Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass2scss.o src/sass2scss.cpp 2021-05-16T20:31:42.3689497Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/backtrace.o src/backtrace.cpp 2021-05-16T20:31:42.7844589Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/operators.o src/operators.cpp 2021-05-16T20:31:44.2630120Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast2c.o src/ast2c.cpp 2021-05-16T20:31:45.2800458Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/c2ast.o src/c2ast.cpp 2021-05-16T20:31:46.5204068Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/to_value.o src/to_value.cpp 2021-05-16T20:31:48.0718970Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/source_map.o src/source_map.cpp 2021-05-16T20:31:49.2264635Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/error_handling.o src/error_handling.cpp 2021-05-16T20:31:51.4229624Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/memory/allocator.o src/memory/allocator.cpp 2021-05-16T20:31:51.7354161Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/memory/shared_ptr.o src/memory/shared_ptr.cpp 2021-05-16T20:31:52.0521403Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/utf8_string.o src/utf8_string.cpp 2021-05-16T20:31:52.4684424Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/base64vlq.o src/base64vlq.cpp 2021-05-16T20:31:52.8039819Z mkdir lib 2021-05-16T20:31:52.8057647Z ar rcvs lib/libsass.a src/cencode.o src/ast.o src/ast_values.o src/ast_supports.o src/ast_sel_cmp.o src/ast_sel_unify.o src/ast_sel_super.o src/ast_sel_weave.o src/ast_selectors.o src/context.o src/constants.o src/fn_utils.o src/fn_miscs.o src/fn_maps.o src/fn_lists.o src/fn_colors.o src/fn_numbers.o src/fn_strings.o src/fn_selectors.o src/color_maps.o src/environment.o src/ast_fwd_decl.o src/bind.o src/file.o src/util.o src/util_string.o src/json.o src/units.o src/values.o src/plugins.o src/source.o src/position.o src/lexer.o src/parser.o src/parser_selectors.o src/prelexer.o src/eval.o src/eval_selectors.o src/expand.o src/listize.o src/cssize.o src/extender.o src/extension.o src/stylesheet.o src/output.o src/inspect.o src/emitter.o src/check_nesting.o src/remove_placeholders.o src/sass.o src/sass_values.o src/sass_context.o src/sass_functions.o src/sass2scss.o src/backtrace.o src/operators.o src/ast2c.o src/c2ast.o src/to_value.o src/source_map.o src/error_handling.o src/memory/allocator.o src/memory/shared_ptr.o src/utf8_string.o src/base64vlq.o 2021-05-16T20:31:53.5998195Z installing to /home/runner/work/_temp/Library/00LOCK-sass/00new/sass/libs 2021-05-16T20:31:53.5999202Z a - src/cencode.o 2021-05-16T20:31:53.6001119Z ** R 2021-05-16T20:31:53.6001706Z a - src/ast.o 2021-05-16T20:31:53.6002842Z ** inst 2021-05-16T20:31:53.6003436Z a - src/ast_values.o 2021-05-16T20:31:53.6004876Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:31:53.6005607Z a - src/ast_supports.o 2021-05-16T20:31:53.6006159Z a - src/ast_sel_cmp.o 2021-05-16T20:31:53.6006689Z a - src/ast_sel_unify.o 2021-05-16T20:31:53.6007241Z a - src/ast_sel_super.o 2021-05-16T20:31:53.6007773Z a - src/ast_sel_weave.o 2021-05-16T20:31:53.6008341Z a - src/ast_selectors.o 2021-05-16T20:31:53.6008865Z a - src/context.o 2021-05-16T20:31:53.6009394Z a - src/constants.o 2021-05-16T20:31:53.6009899Z a - src/fn_utils.o 2021-05-16T20:31:53.6010399Z a - src/fn_miscs.o 2021-05-16T20:31:53.6010892Z a - src/fn_maps.o 2021-05-16T20:31:53.6011372Z a - src/fn_lists.o 2021-05-16T20:31:53.6011878Z a - src/fn_colors.o 2021-05-16T20:31:53.6012539Z a - src/fn_numbers.o 2021-05-16T20:31:53.6013077Z a - src/fn_strings.o 2021-05-16T20:31:53.6013611Z a - src/fn_selectors.o 2021-05-16T20:31:53.6014153Z a - src/color_maps.o 2021-05-16T20:31:53.6014738Z a - src/environment.o 2021-05-16T20:31:53.6015296Z a - src/ast_fwd_decl.o 2021-05-16T20:31:53.6015795Z a - src/bind.o 2021-05-16T20:31:53.6016256Z a - src/file.o 2021-05-16T20:31:53.6016726Z a - src/util.o 2021-05-16T20:31:53.6017218Z a - src/util_string.o 2021-05-16T20:31:53.6017712Z a - src/json.o 2021-05-16T20:31:53.6018178Z a - src/units.o 2021-05-16T20:31:53.6018673Z a - src/values.o 2021-05-16T20:31:53.6019168Z a - src/plugins.o 2021-05-16T20:31:53.6020018Z a - src/source.o 2021-05-16T20:31:53.6020543Z a - src/position.o 2021-05-16T20:31:53.6021050Z a - src/lexer.o 2021-05-16T20:31:53.6021533Z a - src/parser.o 2021-05-16T20:31:53.6022107Z a - src/parser_selectors.o 2021-05-16T20:31:53.6022677Z a - src/prelexer.o 2021-05-16T20:31:53.6023170Z a - src/eval.o 2021-05-16T20:31:53.6023721Z a - src/eval_selectors.o 2021-05-16T20:31:53.6024257Z a - src/expand.o 2021-05-16T20:31:53.6024767Z a - src/listize.o 2021-05-16T20:31:53.6025262Z a - src/cssize.o 2021-05-16T20:31:53.6025822Z a - src/extender.o 2021-05-16T20:31:53.6026358Z a - src/extension.o 2021-05-16T20:31:53.6026913Z a - src/stylesheet.o 2021-05-16T20:31:53.6027564Z a - src/output.o 2021-05-16T20:31:53.6028074Z a - src/inspect.o 2021-05-16T20:31:53.6028581Z a - src/emitter.o 2021-05-16T20:31:53.6029132Z a - src/check_nesting.o 2021-05-16T20:31:53.6029761Z a - src/remove_placeholders.o 2021-05-16T20:31:53.6030305Z a - src/sass.o 2021-05-16T20:31:53.6030821Z a - src/sass_values.o 2021-05-16T20:31:53.6031356Z a - src/sass_context.o 2021-05-16T20:31:53.6031922Z a - src/sass_functions.o 2021-05-16T20:31:53.6032479Z a - src/sass2scss.o 2021-05-16T20:31:53.6033021Z a - src/backtrace.o 2021-05-16T20:31:53.6033553Z a - src/operators.o 2021-05-16T20:31:53.6034068Z a - src/ast2c.o 2021-05-16T20:31:53.6034537Z a - src/c2ast.o 2021-05-16T20:31:53.6035042Z a - src/to_value.o 2021-05-16T20:31:53.6035560Z a - src/source_map.o 2021-05-16T20:31:53.6036113Z a - src/error_handling.o 2021-05-16T20:31:53.6036708Z a - src/memory/allocator.o 2021-05-16T20:31:53.6037300Z a - src/memory/shared_ptr.o 2021-05-16T20:31:53.6037862Z a - src/utf8_string.o 2021-05-16T20:31:53.6038391Z a - src/base64vlq.o 2021-05-16T20:31:53.6039371Z make[1]: Leaving directory '/tmp/RtmpKmojR4/R.INSTALL1299b507e27c7/sass/src/libsass' 2021-05-16T20:31:53.6040819Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o sass.so compile.o init.o ./libsass/lib/libsass.a -lstdc++ -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:31:54.3304433Z ** help 2021-05-16T20:31:54.4046675Z *** installing help indices 2021-05-16T20:31:54.4478716Z *** copying figures 2021-05-16T20:31:54.4481140Z ** building package indices 2021-05-16T20:31:54.6575303Z ** installing vignettes 2021-05-16T20:31:54.6632475Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:31:54.8684481Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:31:54.8890834Z ** testing if installed package can be loaded from final location 2021-05-16T20:31:55.1088698Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:31:55.1108963Z * DONE (sass) 2021-05-16T20:31:55.8376219Z * installing *source* package ‘httpuv’ ... 2021-05-16T20:31:55.8626082Z ** package ‘httpuv’ successfully unpacked and MD5 sums checked 2021-05-16T20:31:55.8655811Z ** using staged installation 2021-05-16T20:31:55.8817148Z ** libs 2021-05-16T20:31:55.8894108Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c RcppExports-legacy.cpp -o RcppExports-legacy.o 2021-05-16T20:31:59.5934502Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-16T20:32:04.5770047Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c callback.cpp -o callback.o 2021-05-16T20:32:04.8879596Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c callbackqueue.cpp -o callbackqueue.o 2021-05-16T20:32:05.3485553Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c filedatasource-unix.cpp -o filedatasource-unix.o 2021-05-16T20:32:08.5236219Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c filedatasource-win.cpp -o filedatasource-win.o 2021-05-16T20:32:08.5392124Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c fs.cpp -o fs.o 2021-05-16T20:32:11.4298200Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c http.cpp -o http.o 2021-05-16T20:32:15.2461681Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c httprequest.cpp -o httprequest.o 2021-05-16T20:32:22.4338017Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c httpresponse.cpp -o httpresponse.o 2021-05-16T20:32:26.1253150Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c httpuv.cpp -o httpuv.o 2021-05-16T20:32:31.7125180Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c md5.c -o md5.o 2021-05-16T20:32:31.8314705Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c mime.cpp -o mime.o 2021-05-16T20:32:34.5982496Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c set_invalid_parameter.c -o set_invalid_parameter.o 2021-05-16T20:32:34.6126364Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c socket.cpp -o socket.o 2021-05-16T20:32:37.9207158Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c staticpath.cpp -o staticpath.o 2021-05-16T20:32:44.6317351Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c thread.cpp -o thread.o 2021-05-16T20:32:44.7093506Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c timegm.cpp -o timegm.o 2021-05-16T20:32:44.7447580Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c utils.cpp -o utils.o 2021-05-16T20:32:48.2077648Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c uvutil.cpp -o uvutil.o 2021-05-16T20:32:51.1737580Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c webapplication.cpp -o webapplication.o 2021-05-16T20:32:59.1555932Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c websockets-base.cpp -o websockets-base.o 2021-05-16T20:32:59.4121361Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c websockets-hixie76.cpp -o websockets-hixie76.o 2021-05-16T20:33:02.3492517Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c websockets-hybi03.cpp -o websockets-hybi03.o 2021-05-16T20:33:05.7034298Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c websockets-ietf.cpp -o websockets-ietf.o 2021-05-16T20:33:08.8949618Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c websockets.cpp -o websockets.o 2021-05-16T20:33:12.2999762Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c winutils.cpp -o winutils.o 2021-05-16T20:33:12.3151810Z cp -p -f libuv/m4/lt_obsolete.m4 libuv/m4/lt~obsolete.m4 2021-05-16T20:33:12.3180293Z (cd libuv \ 2021-05-16T20:33:12.3181054Z && touch aclocal.m4 \ 2021-05-16T20:33:12.3182262Z && touch -r aclocal.m4 configure Makefile.in \ 2021-05-16T20:33:12.3183010Z && chmod +x configure \ 2021-05-16T20:33:12.3184357Z && CC="gcc" CFLAGS="-g -O2 -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" LDFLAGS="-L/usr/local/lib" ./configure "--quiet") 2021-05-16T20:33:16.0437588Z make --directory=libuv \ 2021-05-16T20:33:16.0438595Z HAVE_DTRACE=0 2021-05-16T20:33:16.0537786Z make[1]: Entering directory '/tmp/Rtmp4cdHmU/R.INSTALL12ae379a2230c/httpuv/src/libuv' 2021-05-16T20:33:16.0628764Z CC src/libuv_la-fs-poll.lo 2021-05-16T20:33:16.6462085Z CC src/libuv_la-idna.lo 2021-05-16T20:33:17.2431687Z CC src/libuv_la-inet.lo 2021-05-16T20:33:17.8596443Z CC src/libuv_la-random.lo 2021-05-16T20:33:18.3531864Z CC src/libuv_la-strscpy.lo 2021-05-16T20:33:18.8109226Z CC src/libuv_la-threadpool.lo 2021-05-16T20:33:19.4250586Z CC src/libuv_la-timer.lo 2021-05-16T20:33:20.0095855Z CC src/libuv_la-uv-data-getter-setters.lo 2021-05-16T20:33:20.5089135Z CC src/libuv_la-uv-common.lo 2021-05-16T20:33:21.5212362Z CC src/libuv_la-version.lo 2021-05-16T20:33:21.9810112Z CC src/unix/libuv_la-async.lo 2021-05-16T20:33:22.5548563Z CC src/unix/libuv_la-core.lo 2021-05-16T20:33:23.6393879Z CC src/unix/libuv_la-dl.lo 2021-05-16T20:33:24.1348103Z CC src/unix/libuv_la-fs.lo 2021-05-16T20:33:25.5624117Z CC src/unix/libuv_la-getaddrinfo.lo 2021-05-16T20:33:26.1281481Z CC src/unix/libuv_la-getnameinfo.lo 2021-05-16T20:33:26.6357652Z CC src/unix/libuv_la-loop-watcher.lo 2021-05-16T20:33:27.2125916Z CC src/unix/libuv_la-loop.lo 2021-05-16T20:33:27.7634209Z CC src/unix/libuv_la-pipe.lo 2021-05-16T20:33:28.3681716Z CC src/unix/libuv_la-poll.lo 2021-05-16T20:33:28.9036372Z CC src/unix/libuv_la-process.lo 2021-05-16T20:33:29.6337512Z CC src/unix/libuv_la-random-devurandom.lo 2021-05-16T20:33:30.1469860Z CC src/unix/libuv_la-signal.lo 2021-05-16T20:33:31.0065646Z CC src/unix/libuv_la-stream.lo 2021-05-16T20:33:32.0119251Z CC src/unix/libuv_la-tcp.lo 2021-05-16T20:33:32.6376407Z CC src/unix/libuv_la-thread.lo 2021-05-16T20:33:33.3239638Z CC src/unix/libuv_la-tty.lo 2021-05-16T20:33:33.9026540Z CC src/unix/libuv_la-udp.lo 2021-05-16T20:33:34.8977812Z CC src/unix/libuv_la-linux-core.lo 2021-05-16T20:33:35.8377986Z CC src/unix/libuv_la-linux-inotify.lo 2021-05-16T20:33:36.6229248Z CC src/unix/libuv_la-linux-syscalls.lo 2021-05-16T20:33:37.0629714Z CC src/unix/libuv_la-procfs-exepath.lo 2021-05-16T20:33:37.5549137Z CC src/unix/libuv_la-proctitle.lo 2021-05-16T20:33:38.0770184Z CC src/unix/libuv_la-random-getrandom.lo 2021-05-16T20:33:38.5623908Z CC src/unix/libuv_la-random-sysctl-linux.lo 2021-05-16T20:33:39.0614653Z CC src/unix/libuv_la-sysinfo-loadavg.lo 2021-05-16T20:33:39.5399215Z CCLD libuv.la 2021-05-16T20:33:39.7374148Z ar: `u' modifier ignored since `D' is the default (see `U') 2021-05-16T20:33:39.7666042Z make[1]: Leaving directory '/tmp/Rtmp4cdHmU/R.INSTALL12ae379a2230c/httpuv/src/libuv' 2021-05-16T20:33:39.7668932Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c http-parser/http_parser.c -o http-parser/http_parser.o 2021-05-16T20:33:40.3355938Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c sha1/sha1.c -o sha1/sha1.o 2021-05-16T20:33:40.5195385Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c base64/base64.cpp -o base64/base64.o 2021-05-16T20:33:40.7168737Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o httpuv.so RcppExports-legacy.o RcppExports.o callback.o callbackqueue.o filedatasource-unix.o filedatasource-win.o fs.o http.o httprequest.o httpresponse.o httpuv.o md5.o mime.o set_invalid_parameter.o socket.o staticpath.o thread.o timegm.o utils.o uvutil.o webapplication.o websockets-base.o websockets-hixie76.o websockets-hybi03.o websockets-ietf.o websockets.o winutils.o ./libuv/.libs/libuv.a ./http-parser/http_parser.o ./sha1/sha1.o ./base64/base64.o -pthread -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:33:41.0220755Z installing to /home/runner/work/_temp/Library/00LOCK-httpuv/00new/httpuv/libs 2021-05-16T20:33:41.0422401Z ** R 2021-05-16T20:33:41.0496533Z ** demo 2021-05-16T20:33:41.0504440Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:33:43.3068237Z ** help 2021-05-16T20:33:43.3721165Z *** installing help indices 2021-05-16T20:33:43.4139801Z ** building package indices 2021-05-16T20:33:43.6330008Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:33:43.9122890Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:33:43.9390550Z ** testing if installed package can be loaded from final location 2021-05-16T20:33:44.2554737Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:33:44.2577318Z * DONE (httpuv) 2021-05-16T20:33:44.6127701Z * installing *source* package ‘crosstalk’ ... 2021-05-16T20:33:44.6203095Z ** package ‘crosstalk’ successfully unpacked and MD5 sums checked 2021-05-16T20:33:44.6233267Z ** using staged installation 2021-05-16T20:33:44.6386030Z ** R 2021-05-16T20:33:44.6436486Z ** inst 2021-05-16T20:33:44.6501078Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:33:45.7182264Z ** help 2021-05-16T20:33:45.7516559Z *** installing help indices 2021-05-16T20:33:45.7824184Z ** building package indices 2021-05-16T20:33:45.9751600Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:33:46.1697313Z ** testing if installed package can be loaded from final location 2021-05-16T20:33:46.3807010Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:33:46.3827640Z * DONE (crosstalk) 2021-05-16T20:33:46.6264030Z * installing *source* package ‘htmlwidgets’ ... 2021-05-16T20:33:46.6288571Z ** package ‘htmlwidgets’ successfully unpacked and MD5 sums checked 2021-05-16T20:33:46.6317998Z ** using staged installation 2021-05-16T20:33:46.6463689Z ** R 2021-05-16T20:33:46.6535049Z ** inst 2021-05-16T20:33:46.6550762Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:33:47.4206566Z ** help 2021-05-16T20:33:47.4571109Z *** installing help indices 2021-05-16T20:33:47.4841880Z ** building package indices 2021-05-16T20:33:47.6773785Z ** installing vignettes 2021-05-16T20:33:47.6833460Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:33:47.8773458Z ** testing if installed package can be loaded from final location 2021-05-16T20:33:48.0776236Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:33:48.0786453Z * DONE (htmlwidgets) 2021-05-16T20:33:48.3875200Z * installing *source* package ‘scales’ ... 2021-05-16T20:33:48.3927166Z ** package ‘scales’ successfully unpacked and MD5 sums checked 2021-05-16T20:33:48.3928338Z ** using staged installation 2021-05-16T20:33:48.4077441Z ** R 2021-05-16T20:33:48.4211986Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:33:50.5552288Z ** help 2021-05-16T20:33:50.7293718Z *** installing help indices 2021-05-16T20:33:50.8364588Z *** copying figures 2021-05-16T20:33:50.8371822Z ** building package indices 2021-05-16T20:33:51.1142340Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:33:51.3582325Z ** testing if installed package can be loaded from final location 2021-05-16T20:33:51.6357608Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:33:51.6381195Z * DONE (scales) 2021-05-16T20:33:52.3758924Z * installing *source* package ‘rmarkdown’ ... 2021-05-16T20:33:52.4035171Z ** package ‘rmarkdown’ successfully unpacked and MD5 sums checked 2021-05-16T20:33:52.4061471Z ** using staged installation 2021-05-16T20:33:52.4325703Z ** R 2021-05-16T20:33:52.4685658Z ** inst 2021-05-16T20:33:52.4898445Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:33:55.4600200Z ** help 2021-05-16T20:33:55.6446929Z *** installing help indices 2021-05-16T20:33:55.7871294Z *** copying figures 2021-05-16T20:33:55.7872628Z ** building package indices 2021-05-16T20:33:56.0613283Z ** installing vignettes 2021-05-16T20:33:56.0675330Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:33:56.2952713Z ** testing if installed package can be loaded from final location 2021-05-16T20:33:57.1303940Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:33:57.1307673Z * DONE (rmarkdown) 2021-05-16T20:33:57.1309272Z * installing *source* package ‘R.utils’ ... 2021-05-16T20:33:57.1310475Z ** package ‘R.utils’ successfully unpacked and MD5 sums checked 2021-05-16T20:33:57.1311338Z ** using staged installation 2021-05-16T20:33:57.1311924Z ** R 2021-05-16T20:33:57.1918108Z ** inst 2021-05-16T20:33:57.1929317Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:34:02.6015276Z Warning in setGenericS3.default(name, export = exportGeneric, envir = envir, : 2021-05-16T20:34:02.6016829Z Renamed the preexisting function warnings to warnings.default, which was defined in environment base. 2021-05-16T20:34:02.6018583Z ** help 2021-05-16T20:34:03.4171176Z *** installing help indices 2021-05-16T20:34:03.8664350Z ** building package indices 2021-05-16T20:34:04.5349593Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:34:04.7646685Z ** testing if installed package can be loaded from final location 2021-05-16T20:34:05.1439184Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:34:05.1515521Z * DONE (R.utils) 2021-05-16T20:34:05.9017766Z * installing *source* package ‘bslib’ ... 2021-05-16T20:34:05.9283903Z ** package ‘bslib’ successfully unpacked and MD5 sums checked 2021-05-16T20:34:05.9314115Z ** using staged installation 2021-05-16T20:34:05.9486878Z ** R 2021-05-16T20:34:06.0105488Z ** inst 2021-05-16T20:34:06.0409351Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:34:06.8923622Z ** help 2021-05-16T20:34:06.9451286Z *** installing help indices 2021-05-16T20:34:06.9833205Z *** copying figures 2021-05-16T20:34:06.9836364Z ** building package indices 2021-05-16T20:34:07.1915161Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:34:07.4314123Z ** testing if installed package can be loaded from final location 2021-05-16T20:34:07.6893554Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:34:07.6914986Z * DONE (bslib) 2021-05-16T20:34:08.5693606Z * installing *source* package ‘ggplot2’ ... 2021-05-16T20:34:08.6007169Z ** package ‘ggplot2’ successfully unpacked and MD5 sums checked 2021-05-16T20:34:08.6008729Z ** using staged installation 2021-05-16T20:34:08.6262813Z ** R 2021-05-16T20:34:08.7302187Z ** data 2021-05-16T20:34:08.7314989Z *** moving datasets to lazyload DB 2021-05-16T20:34:09.2444349Z ** inst 2021-05-16T20:34:09.2481114Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:34:17.4341602Z ** help 2021-05-16T20:34:18.1734226Z *** installing help indices 2021-05-16T20:34:18.5205658Z *** copying figures 2021-05-16T20:34:18.5208598Z ** building package indices 2021-05-16T20:34:19.1188297Z ** installing vignettes 2021-05-16T20:34:19.1380868Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:34:19.7096466Z ** testing if installed package can be loaded from final location 2021-05-16T20:34:20.5159451Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:34:20.5250122Z * DONE (ggplot2) 2021-05-16T20:34:21.4457015Z * installing *source* package ‘shiny’ ... 2021-05-16T20:34:21.4819688Z ** package ‘shiny’ successfully unpacked and MD5 sums checked 2021-05-16T20:34:21.4849840Z ** using staged installation 2021-05-16T20:34:21.5191253Z ** R 2021-05-16T20:34:21.5952492Z ** inst 2021-05-16T20:34:21.6189839Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:34:36.7975626Z ** help 2021-05-16T20:34:37.4323126Z *** installing help indices 2021-05-16T20:34:37.7130126Z *** copying figures 2021-05-16T20:34:37.7137060Z ** building package indices 2021-05-16T20:34:38.2610331Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:34:38.6250939Z ** testing if installed package can be loaded from final location 2021-05-16T20:34:39.3851149Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:34:39.4003964Z * DONE (shiny) 2021-05-16T20:34:39.6174364Z * installing *source* package ‘miniUI’ ... 2021-05-16T20:34:39.6183641Z ** package ‘miniUI’ successfully unpacked and MD5 sums checked 2021-05-16T20:34:39.6212135Z ** using staged installation 2021-05-16T20:34:39.6345087Z ** R 2021-05-16T20:34:39.6375436Z ** inst 2021-05-16T20:34:39.6383164Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:34:40.0831790Z ** help 2021-05-16T20:34:40.1080555Z *** installing help indices 2021-05-16T20:34:40.1258903Z ** building package indices 2021-05-16T20:34:40.3081533Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:34:40.6585291Z ** testing if installed package can be loaded from final location 2021-05-16T20:34:41.0058592Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:34:41.0063798Z * DONE (miniUI) 2021-05-16T20:34:41.4051425Z * installing *source* package ‘manipulateWidget’ ... 2021-05-16T20:34:41.4172070Z ** package ‘manipulateWidget’ successfully unpacked and MD5 sums checked 2021-05-16T20:34:41.4202225Z ** using staged installation 2021-05-16T20:34:41.4376355Z ** R 2021-05-16T20:34:41.4481512Z ** inst 2021-05-16T20:34:41.4530352Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:34:42.8893111Z ** help 2021-05-16T20:34:42.9529122Z *** installing help indices 2021-05-16T20:34:42.9989728Z ** building package indices 2021-05-16T20:34:43.2133231Z ** installing vignettes 2021-05-16T20:34:43.2176230Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:34:43.5926336Z ** testing if installed package can be loaded from final location 2021-05-16T20:34:43.9924106Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:34:43.9954658Z * DONE (manipulateWidget) 2021-05-16T20:34:44.7543103Z * installing *source* package ‘rgl’ ... 2021-05-16T20:34:44.7830236Z ** package ‘rgl’ successfully unpacked and MD5 sums checked 2021-05-16T20:34:44.7860028Z ** using staged installation 2021-05-16T20:34:44.9424351Z checking for gcc... gcc 2021-05-16T20:34:44.9994829Z checking whether the C compiler works... yes 2021-05-16T20:34:44.9996232Z checking for C compiler default output file name... a.out 2021-05-16T20:34:45.0338258Z checking for suffix of executables... 2021-05-16T20:34:45.0774767Z checking whether we are cross compiling... no 2021-05-16T20:34:45.0995437Z checking for suffix of object files... o 2021-05-16T20:34:45.1193178Z checking whether we are using the GNU C compiler... yes 2021-05-16T20:34:45.1381446Z checking whether gcc accepts -g... yes 2021-05-16T20:34:45.1709823Z checking for gcc option to accept ISO C89... none needed 2021-05-16T20:34:45.1903025Z checking how to run the C preprocessor... gcc -E 2021-05-16T20:34:45.2104984Z checking for gcc... (cached) gcc 2021-05-16T20:34:45.2292162Z checking whether we are using the GNU C compiler... (cached) yes 2021-05-16T20:34:45.2294649Z checking whether gcc accepts -g... (cached) yes 2021-05-16T20:34:45.2296803Z checking for gcc option to accept ISO C89... (cached) none needed 2021-05-16T20:34:45.2323421Z checking for libpng-config... yes 2021-05-16T20:34:45.2324511Z configure: using libpng-config 2021-05-16T20:34:45.2337461Z configure: using libpng dynamic linkage 2021-05-16T20:34:45.3008271Z checking for X... libraries , headers 2021-05-16T20:34:45.3423096Z checking for XAllocClassHint... yes 2021-05-16T20:34:45.3976091Z checking GL/gl.h usability... yes 2021-05-16T20:34:45.4235189Z checking GL/gl.h presence... yes 2021-05-16T20:34:45.4236174Z checking for GL/gl.h... yes 2021-05-16T20:34:45.4839719Z checking GL/glu.h usability... yes 2021-05-16T20:34:45.5101970Z checking GL/glu.h presence... yes 2021-05-16T20:34:45.5102914Z checking for GL/glu.h... yes 2021-05-16T20:34:45.5642967Z checking for glEnd in -lGL... yes 2021-05-16T20:34:45.6171198Z checking for glEnd... yes 2021-05-16T20:34:45.6909112Z checking for gluErrorString in -lGLU... yes 2021-05-16T20:34:45.7670844Z checking for gluErrorString... yes 2021-05-16T20:34:45.7678772Z checking for pkg-config... yes 2021-05-16T20:34:45.7748096Z configure: using Freetype and FTGL 2021-05-16T20:34:45.7930556Z configure: creating ./config.status 2021-05-16T20:34:45.8670705Z config.status: creating R/noOpenGL.R 2021-05-16T20:34:45.8836845Z config.status: creating src/useNULL/Makevars 2021-05-16T20:34:45.8996699Z config.status: creating src/Makevars 2021-05-16T20:34:45.9566954Z ** libs 2021-05-16T20:34:45.9637555Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c ABCLineSet.cpp -o ABCLineSet.o 2021-05-16T20:34:46.4609942Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c BBoxDeco.cpp -o BBoxDeco.o 2021-05-16T20:34:47.1023302Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Background.cpp -o Background.o 2021-05-16T20:34:47.5819187Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c ClipPlane.cpp -o ClipPlane.o 2021-05-16T20:34:48.0367726Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Color.cpp -o Color.o 2021-05-16T20:34:48.2096794Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Disposable.cpp -o Disposable.o 2021-05-16T20:34:48.4398696Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Light.cpp -o Light.o 2021-05-16T20:34:48.6038585Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c LineSet.cpp -o LineSet.o 2021-05-16T20:34:48.9637713Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c LineStripSet.cpp -o LineStripSet.o 2021-05-16T20:34:49.3231897Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Material.cpp -o Material.o 2021-05-16T20:34:49.5039457Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c NULLgui.cpp -o NULLgui.o 2021-05-16T20:34:49.8716838Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c PlaneSet.cpp -o PlaneSet.o 2021-05-16T20:34:50.4537499Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c PointSet.cpp -o PointSet.o 2021-05-16T20:34:50.8091235Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c PrimitiveSet.cpp -o PrimitiveSet.o 2021-05-16T20:34:51.3008380Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c RenderContext.cpp -o RenderContext.o 2021-05-16T20:34:51.5883059Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Shape.cpp -o Shape.o 2021-05-16T20:34:52.0064803Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c SphereMesh.cpp -o SphereMesh.o 2021-05-16T20:34:52.4151821Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c SphereSet.cpp -o SphereSet.o 2021-05-16T20:34:52.8859669Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c SpriteSet.cpp -o SpriteSet.o 2021-05-16T20:34:53.4962570Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c String.cpp -o String.o 2021-05-16T20:34:53.5767873Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Surface.cpp -o Surface.o 2021-05-16T20:34:54.0810835Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c TextSet.cpp -o TextSet.o 2021-05-16T20:34:54.5738580Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Texture.cpp -o Texture.o 2021-05-16T20:34:54.7655034Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Viewpoint.cpp -o Viewpoint.o 2021-05-16T20:34:55.2310303Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c api.cpp -o api.o 2021-05-16T20:34:56.1933453Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c assert.cpp -o assert.o 2021-05-16T20:34:56.2693928Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c callbacks.cpp -o callbacks.o 2021-05-16T20:34:56.7376046Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c device.cpp -o device.o 2021-05-16T20:34:57.1928800Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c devicemanager.cpp -o devicemanager.o 2021-05-16T20:34:57.7879714Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c fps.cpp -o fps.o 2021-05-16T20:34:58.1712216Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c ftgl.cpp -o ftgl.o 2021-05-16T20:34:59.4200733Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c geom.cpp -o geom.o 2021-05-16T20:34:59.5641663Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c gl2ps.c -o gl2ps.o 2021-05-16T20:35:01.1422079Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c glErrors.cpp -o glErrors.o 2021-05-16T20:35:01.2741293Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c glgui.cpp -o glgui.o 2021-05-16T20:35:01.7483609Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c gui.cpp -o gui.o 2021-05-16T20:35:02.1234366Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c init.cpp -o init.o 2021-05-16T20:35:02.5752263Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c par3d.cpp -o par3d.o 2021-05-16T20:35:03.2079253Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c pixmap.cpp -o pixmap.o 2021-05-16T20:35:03.4223501Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c platform.cpp -o platform.o 2021-05-16T20:35:03.4889278Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c pretty.c -o pretty.o 2021-05-16T20:35:03.5525783Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c render.cpp -o render.o 2021-05-16T20:35:03.7315947Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c rglmath.cpp -o rglmath.o 2021-05-16T20:35:03.9366874Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c rglview.cpp -o rglview.o 2021-05-16T20:35:04.5602569Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c scene.cpp -o scene.o 2021-05-16T20:35:05.2454347Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c select.cpp -o select.o 2021-05-16T20:35:05.6069958Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c subscene.cpp -o subscene.o 2021-05-16T20:35:07.1517915Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c win32gui.cpp -o win32gui.o 2021-05-16T20:35:07.1673029Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c win32lib.cpp -o win32lib.o 2021-05-16T20:35:07.1818163Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c x11gui.cpp -o x11gui.o 2021-05-16T20:35:07.9681165Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c x11lib.cpp -o x11lib.o 2021-05-16T20:35:08.3892709Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rgl.so ABCLineSet.o BBoxDeco.o Background.o ClipPlane.o Color.o Disposable.o Light.o LineSet.o LineStripSet.o Material.o NULLgui.o PlaneSet.o PointSet.o PrimitiveSet.o RenderContext.o Shape.o SphereMesh.o SphereSet.o SpriteSet.o String.o Surface.o TextSet.o Texture.o Viewpoint.o api.o assert.o callbacks.o device.o devicemanager.o fps.o ftgl.o geom.o gl2ps.o glErrors.o glgui.o gui.o init.o par3d.o pixmap.o platform.o pretty.o render.o rglmath.o rglview.o scene.o select.o subscene.o win32gui.o win32lib.o x11gui.o x11lib.o -lGLU -lGL -lpng16 -lX11 -lfreetype -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:35:08.5378055Z cp -Rp OpenGL useNULL && \ 2021-05-16T20:35:08.5379158Z cp -p *.c *.h *.cpp useNULL/ && \ 2021-05-16T20:35:08.5379809Z cd useNULL && \ 2021-05-16T20:35:08.5380744Z /opt/R/devel/lib/R/bin/R CMD SHLIB -o useNULL.so *.cpp *.c && \ 2021-05-16T20:35:08.5381404Z cd .. && \ 2021-05-16T20:35:08.5382144Z mkdir -p ../inst/useNULL && \ 2021-05-16T20:35:08.5382909Z mv useNULL/useNULL.so ../inst/useNULL/rgl.so && \ 2021-05-16T20:35:08.5383801Z rm useNULL/*.cpp useNULL/*.c useNULL/*.h useNULL/OpenGL/* 2021-05-16T20:35:08.6102860Z make[1]: Entering directory '/tmp/RtmptDmJ7j/R.INSTALL16cd3476c6993/rgl/src/useNULL' 2021-05-16T20:35:08.6105366Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c ABCLineSet.cpp -o ABCLineSet.o 2021-05-16T20:35:09.0507905Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c BBoxDeco.cpp -o BBoxDeco.o 2021-05-16T20:35:09.5119114Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Background.cpp -o Background.o 2021-05-16T20:35:09.9073102Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c ClipPlane.cpp -o ClipPlane.o 2021-05-16T20:35:10.2973869Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Color.cpp -o Color.o 2021-05-16T20:35:10.4137811Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Disposable.cpp -o Disposable.o 2021-05-16T20:35:10.6431405Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Light.cpp -o Light.o 2021-05-16T20:35:10.7509464Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c LineSet.cpp -o LineSet.o 2021-05-16T20:35:11.0560926Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c LineStripSet.cpp -o LineStripSet.o 2021-05-16T20:35:11.3625809Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Material.cpp -o Material.o 2021-05-16T20:35:11.4608953Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c NULLgui.cpp -o NULLgui.o 2021-05-16T20:35:11.7671156Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c PlaneSet.cpp -o PlaneSet.o 2021-05-16T20:35:12.2893777Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c PointSet.cpp -o PointSet.o 2021-05-16T20:35:12.5953042Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c PrimitiveSet.cpp -o PrimitiveSet.o 2021-05-16T20:35:13.0150472Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c RenderContext.cpp -o RenderContext.o 2021-05-16T20:35:13.2534294Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Shape.cpp -o Shape.o 2021-05-16T20:35:13.6131456Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c SphereMesh.cpp -o SphereMesh.o 2021-05-16T20:35:13.9517769Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c SphereSet.cpp -o SphereSet.o 2021-05-16T20:35:14.3701686Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c SpriteSet.cpp -o SpriteSet.o 2021-05-16T20:35:14.8799938Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c String.cpp -o String.o 2021-05-16T20:35:14.9589707Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Surface.cpp -o Surface.o 2021-05-16T20:35:15.3771968Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c TextSet.cpp -o TextSet.o 2021-05-16T20:35:15.6634449Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Texture.cpp -o Texture.o 2021-05-16T20:35:15.7719029Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Viewpoint.cpp -o Viewpoint.o 2021-05-16T20:35:16.1698199Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c api.cpp -o api.o 2021-05-16T20:35:17.0599660Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c assert.cpp -o assert.o 2021-05-16T20:35:17.1350926Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c callbacks.cpp -o callbacks.o 2021-05-16T20:35:17.5328272Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c device.cpp -o device.o 2021-05-16T20:35:17.9158198Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c devicemanager.cpp -o devicemanager.o 2021-05-16T20:35:18.4369097Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c fps.cpp -o fps.o 2021-05-16T20:35:18.7381322Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c ftgl.cpp -o ftgl.o 2021-05-16T20:35:18.7524665Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c geom.cpp -o geom.o 2021-05-16T20:35:18.8940931Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c glErrors.cpp -o glErrors.o 2021-05-16T20:35:18.9700474Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c glgui.cpp -o glgui.o 2021-05-16T20:35:19.2908125Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c gui.cpp -o gui.o 2021-05-16T20:35:19.5905685Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c init.cpp -o init.o 2021-05-16T20:35:19.9593969Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c par3d.cpp -o par3d.o 2021-05-16T20:35:20.5162572Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c pixmap.cpp -o pixmap.o 2021-05-16T20:35:20.6794271Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c platform.cpp -o platform.o 2021-05-16T20:35:20.6956684Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c render.cpp -o render.o 2021-05-16T20:35:20.8143516Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c rglmath.cpp -o rglmath.o 2021-05-16T20:35:21.0182537Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c rglview.cpp -o rglview.o 2021-05-16T20:35:21.5329944Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c scene.cpp -o scene.o 2021-05-16T20:35:22.1517107Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c select.cpp -o select.o 2021-05-16T20:35:22.4476077Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c subscene.cpp -o subscene.o 2021-05-16T20:35:23.8913727Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c win32gui.cpp -o win32gui.o 2021-05-16T20:35:23.9064566Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c win32lib.cpp -o win32lib.o 2021-05-16T20:35:23.9201698Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c x11gui.cpp -o x11gui.o 2021-05-16T20:35:23.9349425Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c x11lib.cpp -o x11lib.o 2021-05-16T20:35:23.9482115Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c gl2ps.c -o gl2ps.o 2021-05-16T20:35:23.9637434Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c pretty.c -o pretty.o 2021-05-16T20:35:24.0275068Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o useNULL.so ABCLineSet.o BBoxDeco.o Background.o ClipPlane.o Color.o Disposable.o Light.o LineSet.o LineStripSet.o Material.o NULLgui.o PlaneSet.o PointSet.o PrimitiveSet.o RenderContext.o Shape.o SphereMesh.o SphereSet.o SpriteSet.o String.o Surface.o TextSet.o Texture.o Viewpoint.o api.o assert.o callbacks.o device.o devicemanager.o fps.o ftgl.o geom.o glErrors.o glgui.o gui.o init.o par3d.o pixmap.o platform.o render.o rglmath.o rglview.o scene.o select.o subscene.o win32gui.o win32lib.o x11gui.o x11lib.o gl2ps.o pretty.o -lpng16 -L/opt/R/devel/lib/R/lib -lR 2021-05-16T20:35:24.1402314Z make[1]: Leaving directory '/tmp/RtmptDmJ7j/R.INSTALL16cd3476c6993/rgl/src/useNULL' 2021-05-16T20:35:24.1498685Z installing to /home/runner/work/_temp/Library/00LOCK-rgl/00new/rgl/libs 2021-05-16T20:35:24.1555684Z ** R 2021-05-16T20:35:24.2066303Z ** demo 2021-05-16T20:35:24.2077880Z ** inst 2021-05-16T20:35:24.2207862Z ** byte-compile and prepare package for lazy loading 2021-05-16T20:35:30.9831245Z ** help 2021-05-16T20:35:31.4788251Z *** installing help indices 2021-05-16T20:35:31.7235399Z *** copying figures 2021-05-16T20:35:31.7235989Z ** building package indices 2021-05-16T20:35:32.1146709Z ** installing vignettes 2021-05-16T20:35:32.1228979Z ** testing if installed package can be loaded from temporary location 2021-05-16T20:35:32.5517031Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T20:35:32.5804686Z ** testing if installed package can be loaded from final location 2021-05-16T20:35:33.2256911Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T20:35:33.2330833Z * DONE (rgl) 2021-05-16T20:35:33.2606023Z 2021-05-16T20:35:33.2607102Z The downloaded source packages are in 2021-05-16T20:35:33.2608509Z ‘/tmp/Rtmp7t0BTN/downloaded_packages’ 2021-05-16T20:35:33.3609967Z Skipping install of 'RNifti' from a github remote, the SHA1 (929106d1) has not changed since last install. 2021-05-16T20:35:33.3611505Z Use `force = TRUE` to force installation 2021-05-16T20:35:33.4250713Z Skipping install of 'oro.nifti' from a github remote, the SHA1 (bd06b05d) has not changed since last install. 2021-05-16T20:35:33.4252677Z Use `force = TRUE` to force installation 2021-05-16T20:35:33.4951668Z Skipping install of 'brainR' from a github remote, the SHA1 (30deb980) has not changed since last install. 2021-05-16T20:35:33.4953028Z Use `force = TRUE` to force installation 2021-05-16T20:35:47.1214343Z Skipping install of 'rcmdcheck' from a cran remote, the SHA1 (1.3.3) has not changed since last install. 2021-05-16T20:35:47.1215712Z Use `force = TRUE` to force installation 2021-05-16T20:35:47.1226152Z Skipping install of 'markdown' from a cran remote, the SHA1 (1.1) has not changed since last install. 2021-05-16T20:35:47.1227024Z Use `force = TRUE` to force installation 2021-05-16T20:35:47.1432872Z ##[group]Run options(width = 100) 2021-05-16T20:35:47.1433380Z options(width = 100) 2021-05-16T20:35:47.1433901Z pkgs <- installed.packages()[, "Package"] 2021-05-16T20:35:47.1434533Z sessioninfo::session_info(pkgs, include_base = TRUE) 2021-05-16T20:35:47.1441609Z shell: /usr/local/bin/Rscript {0} 2021-05-16T20:35:47.1441994Z env: 2021-05-16T20:35:47.1442395Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:35:47.1442832Z TIC_DEPLOY_KEY: 2021-05-16T20:35:47.1443594Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:35:47.1445242Z GITHUB_PAT: *** 2021-05-16T20:35:47.1445632Z COVERALLS_TOKEN: 2021-05-16T20:35:47.1446070Z continue-on-error: true 2021-05-16T20:35:47.1446511Z VDIFFR_RUN_TESTS: 2021-05-16T20:35:47.1446949Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:35:47.1447365Z TZ: UTC 2021-05-16T20:35:47.1447717Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:35:47.1448145Z NOT_CRAN: true 2021-05-16T20:35:47.1448486Z ##[endgroup] 2021-05-16T20:35:47.6112949Z ─ Session info ─────────────────────────────────────────────────────────────────────────────────── 2021-05-16T20:35:47.6114298Z setting value 2021-05-16T20:35:47.6115690Z version R Under development (unstable) (2021-05-14 r80296) 2021-05-16T20:35:47.6116635Z os Ubuntu 20.04.2 LTS 2021-05-16T20:35:47.6118085Z system x86_64, linux-gnu 2021-05-16T20:35:47.6118679Z ui X11 2021-05-16T20:35:47.6119241Z language (EN) 2021-05-16T20:35:47.6120056Z collate C.UTF-8 2021-05-16T20:35:47.6120736Z ctype C.UTF-8 2021-05-16T20:35:47.6121244Z tz UTC 2021-05-16T20:35:47.6121876Z date 2021-05-16 2021-05-16T20:35:47.6122146Z 2021-05-16T20:35:47.6122957Z ─ Packages ─────────────────────────────────────────────────────────────────────────────────────── 2021-05-16T20:35:47.6123626Z package * version date lib source 2021-05-16T20:35:47.6124468Z abind 1.4-5 2016-07-21 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6125332Z aghast 0.2.1 2021-05-16 [1] Github (muschellij2/aghast@0c3b853) 2021-05-16T20:35:47.6126188Z askpass 1.1 2019-01-13 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6126976Z base * 4.2.0 2021-05-15 [2] local 2021-05-16T20:35:47.6127752Z base64enc 0.1-3 2015-07-28 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6128572Z 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2020-08-26 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6209228Z R6 2.5.0 2020-10-28 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6209990Z rappdirs 0.3.3 2021-01-31 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6210799Z rcmdcheck 1.3.3 2019-05-07 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6211625Z RColorBrewer 1.1-2 2014-12-07 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6212611Z Rcpp 1.0.6 2021-01-15 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6213413Z rematch2 2.1.2 2020-05-01 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6214200Z remotes 2.3.0 2021-04-01 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6215009Z reshape2 1.4.4 2020-04-09 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6215782Z rex 1.2.0 2020-04-21 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6216548Z rgl 0.106.8 2021-04-23 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6217311Z rlang 0.4.11 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6218083Z rmarkdown 2.8 2021-05-07 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6218966Z RNifti 1.3.1 2021-05-16 [1] Github (neuroconductor/RNifti@929106d) 2021-05-16T20:35:47.6219831Z roxygen2 7.1.1 2020-06-27 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6220619Z rpart 4.1-15 2019-04-12 [2] CRAN (R 4.2.0) 2021-05-16T20:35:47.6221398Z rprojroot 2.0.2 2020-11-15 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6222321Z rstudioapi 0.13 2020-11-12 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6223125Z rticles 0.19 2021-03-04 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6223972Z rversions 2.0.2 2020-05-25 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6224772Z sass 0.4.0 2021-05-12 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6225535Z scales 1.1.1 2020-05-11 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6226341Z sessioninfo 1.1.1 2018-11-05 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6227139Z shiny 1.6.0 2021-01-25 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6227926Z sourcetools 0.1.7 2018-04-25 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6228739Z spatial 7.3-14 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-16T20:35:47.6229518Z splines 4.2.0 2021-05-15 [2] local 2021-05-16T20:35:47.6230299Z stats * 4.2.0 2021-05-15 [2] local 2021-05-16T20:35:47.6231081Z stats4 4.2.0 2021-05-15 [2] local 2021-05-16T20:35:47.6231853Z stringi 1.6.1 2021-05-10 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6232635Z stringr 1.4.0 2019-02-10 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6233408Z survival 3.2-11 2021-04-26 [2] CRAN (R 4.2.0) 2021-05-16T20:35:47.6234182Z sys 3.4 2020-07-23 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6235043Z sysreqs 1.0.0.9000 2021-05-16 [1] Github (r-hub/sysreqs@f068afa) 2021-05-16T20:35:47.6235855Z tcltk 4.2.0 2021-05-15 [2] local 2021-05-16T20:35:47.6236632Z testthat 3.0.2 2021-02-14 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6237408Z tibble 3.1.2 2021-05-16 [1] CRAN (R 4.2.0) 2021-05-16T20:35:47.6238231Z tic 0.10.0 2021-05-16 [1] Github (ropensci/tic@3b4dfb8) 2021-05-16T20:35:47.6239036Z tidyr 1.1.3 2021-03-03 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6239836Z tidyselect 1.1.1 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6240640Z tinytex 0.31 2021-03-30 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6241399Z tools 4.2.0 2021-05-15 [2] local 2021-05-16T20:35:47.6242173Z usethis 2.0.1 2021-02-10 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6242940Z utf8 1.2.1 2021-03-12 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6243700Z utils * 4.2.0 2021-05-15 [2] local 2021-05-16T20:35:47.6244472Z vctrs 0.3.8 2021-04-29 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6245260Z viridisLite 0.4.0 2021-04-13 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6246059Z waldo 0.2.5 2021-03-08 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6246823Z webshot 0.5.2 2019-11-22 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6247615Z whisker 0.4 2019-08-28 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6248389Z withr 2.4.2 2021-04-18 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6249152Z xfun 0.23 2021-05-15 [1] CRAN (R 4.2.0) 2021-05-16T20:35:47.6249996Z xml2 1.3.2 2020-04-23 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6250745Z xopen 1.0.0 2018-09-17 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6251582Z xtable 1.8-4 2019-04-21 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6252449Z yaml 2.2.1 2020-02-01 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6253218Z zip 2.1.1 2020-08-27 [1] RSPM (R 4.2.0) 2021-05-16T20:35:47.6253509Z 2021-05-16T20:35:47.6253937Z [1] /home/runner/work/_temp/Library 2021-05-16T20:35:47.6254444Z [2] /opt/R/devel/lib/R/library 2021-05-16T20:35:47.6283318Z ##[group]Run Rscript -e 'tic::script()' 2021-05-16T20:35:47.6283836Z Rscript -e 'tic::script()' 2021-05-16T20:35:47.6284236Z ls -l check 2021-05-16T20:35:47.6326281Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-05-16T20:35:47.6326779Z env: 2021-05-16T20:35:47.6327197Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:35:47.6327621Z TIC_DEPLOY_KEY: 2021-05-16T20:35:47.6328380Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:35:47.6330057Z GITHUB_PAT: *** 2021-05-16T20:35:47.6330438Z COVERALLS_TOKEN: 2021-05-16T20:35:47.6330879Z continue-on-error: true 2021-05-16T20:35:47.6331320Z VDIFFR_RUN_TESTS: 2021-05-16T20:35:47.6331759Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:35:47.6332181Z TZ: UTC 2021-05-16T20:35:47.6332656Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:35:47.6333031Z NOT_CRAN: true 2021-05-16T20:35:47.6333382Z ##[endgroup] 2021-05-16T20:35:47.8829336Z ✔ Loading tic stage configuration from tic.R 2021-05-16T20:35:48.0022571Z Running script: step_rcmdcheck(warnings_are_errors = NULL, notes_are_errors = NULL, 2021-05-16T20:35:48.0023643Z args = args, build_args = NULL, error_on = error_on, repos = repo_default(), 2021-05-16T20:35:48.0024397Z timeout = Inf, check_dir = "check") 2021-05-16T20:35:48.0581061Z ── R CMD build ───────────────────────────────────────────────────────────────── 2021-05-16T20:35:48.2621340Z * checking for file ‘.../DESCRIPTION’ ... OK 2021-05-16T20:35:48.2926725Z * preparing ‘neurobase’: 2021-05-16T20:35:48.3040364Z * checking DESCRIPTION meta-information ... OK 2021-05-16T20:35:48.4336719Z * installing the package to build vignettes 2021-05-16T20:37:07.9574475Z * creating vignettes ... OK 2021-05-16T20:37:08.0184652Z * checking for LF line-endings in source and make files and shell scripts 2021-05-16T20:37:08.0194445Z * checking for empty or unneeded directories 2021-05-16T20:37:08.0246830Z * building ‘neurobase_1.30.1.tar.gz’ 2021-05-16T20:37:08.1673910Z 2021-05-16T20:37:08.3664682Z ── R CMD check ───────────────────────────────────────────────────────────────── 2021-05-16T20:37:08.6244241Z * using log directory ‘/home/runner/work/neurobase/neurobase/check/neurobase.Rcheck’ 2021-05-16T20:37:08.6245637Z * using R Under development (unstable) (2021-05-14 r80296) 2021-05-16T20:37:08.6246443Z * using platform: x86_64-pc-linux-gnu (64-bit) 2021-05-16T20:37:08.6247120Z * using session charset: UTF-8 2021-05-16T20:37:08.7656225Z * using option ‘--as-cran’ 2021-05-16T20:37:08.7675308Z * checking for file ‘neurobase/DESCRIPTION’ ... OK 2021-05-16T20:37:08.7676428Z * checking extension type ... Package 2021-05-16T20:37:08.7685361Z * this is package ‘neurobase’ version ‘1.30.1’ 2021-05-16T20:37:08.7686480Z * package encoding: UTF-8 2021-05-16T20:37:08.7721929Z * checking package namespace information ... OK 2021-05-16T20:37:22.7450410Z * checking package dependencies ... OK 2021-05-16T20:37:22.7461555Z * checking if this is a source package ... OK 2021-05-16T20:37:22.7469219Z * checking if there is a namespace ... OK 2021-05-16T20:37:23.4424032Z * checking for executable files ... OK 2021-05-16T20:37:23.4438060Z * checking for hidden files and directories ... OK 2021-05-16T20:37:23.4457430Z * checking for portable file names ... OK 2021-05-16T20:37:23.4469778Z * checking for sufficient/correct file permissions ... OK 2021-05-16T20:37:23.4499246Z * checking serialization versions ... OK 2021-05-16T20:37:28.0757182Z * checking whether package ‘neurobase’ can be installed ... OK 2021-05-16T20:37:28.0865320Z * checking installed package size ... OK 2021-05-16T20:37:28.1992527Z * checking package directory ... OK 2021-05-16T20:37:28.1993478Z * checking for future file timestamps ... OK 2021-05-16T20:37:28.1995095Z * checking ‘build’ directory ... OK 2021-05-16T20:37:28.3470055Z * checking DESCRIPTION meta-information ... OK 2021-05-16T20:37:28.3471275Z * checking top-level files ... OK 2021-05-16T20:37:28.3479346Z * checking for left-over files ... OK 2021-05-16T20:37:28.5200055Z * checking index information ... OK 2021-05-16T20:37:28.6885290Z * checking package subdirectories ... OK 2021-05-16T20:37:28.7369998Z * checking R files for non-ASCII characters ... OK 2021-05-16T20:37:28.7989842Z * checking R files for syntax errors ... OK 2021-05-16T20:37:29.4239384Z * checking whether the package can be loaded ... OK 2021-05-16T20:37:30.0768466Z * checking whether the package can be loaded with stated dependencies ... OK 2021-05-16T20:37:30.7234366Z * checking whether the package can be unloaded cleanly ... OK 2021-05-16T20:37:31.3582337Z * checking whether the namespace can be loaded with stated dependencies ... OK 2021-05-16T20:37:32.0008655Z * checking whether the namespace can be unloaded cleanly ... OK 2021-05-16T20:37:32.6914030Z * checking loading without being on the library search path ... OK 2021-05-16T20:37:33.3668444Z * checking dependencies in R code ... OK 2021-05-16T20:37:34.7412893Z * checking S3 generic/method consistency ... OK 2021-05-16T20:37:35.3516085Z * checking replacement functions ... OK 2021-05-16T20:37:36.0952360Z * checking foreign function calls ... OK 2021-05-16T20:37:43.6419817Z * checking R code for possible problems ... OK 2021-05-16T20:37:43.9766648Z * checking Rd files ... OK 2021-05-16T20:37:44.0213701Z * checking Rd metadata ... OK 2021-05-16T20:37:44.2267812Z * checking Rd line widths ... OK 2021-05-16T20:37:44.3821407Z * checking Rd cross-references ... OK 2021-05-16T20:37:45.0576304Z * checking for missing documentation entries ... OK 2021-05-16T20:37:47.0765292Z * checking for code/documentation mismatches ... OK 2021-05-16T20:37:48.8213787Z * checking Rd \usage sections ... OK 2021-05-16T20:37:49.0064212Z * checking Rd contents ... OK 2021-05-16T20:37:49.2617326Z * checking for unstated dependencies in examples ... OK 2021-05-16T20:37:49.2733122Z * checking installed files from ‘inst/doc’ ... OK 2021-05-16T20:37:49.2818628Z * checking files in ‘vignettes’ ... OK 2021-05-16T20:37:55.1183530Z * checking examples ... OK 2021-05-16T20:38:19.6635031Z * checking examples with --run-donttest ... OK 2021-05-16T20:38:19.7526006Z * checking for unstated dependencies in ‘tests’ ... OK 2021-05-16T20:38:19.9044774Z * checking tests ... 2021-05-16T20:38:21.5050538Z Running ‘testthat.R’ 2021-05-16T20:38:21.5098018Z OK 2021-05-16T20:38:21.6995571Z * checking for unstated dependencies in vignettes ... OK 2021-05-16T20:38:21.7313209Z * checking package vignettes in ‘inst/doc’ ... OK 2021-05-16T20:39:32.6946932Z * checking re-building of vignette outputs ... OK 2021-05-16T20:39:35.7133848Z * checking PDF version of manual ... OK 2021-05-16T20:39:35.7135667Z * checking for non-standard things in the check directory ... OK 2021-05-16T20:39:35.7149242Z * checking for detritus in the temp directory ... OK 2021-05-16T20:39:35.7149902Z * DONE 2021-05-16T20:39:35.7150236Z 2021-05-16T20:39:35.7150696Z Status: OK 2021-05-16T20:39:35.7151035Z 2021-05-16T20:39:35.7915042Z ── R CMD check results ─────────────────────────────────── neurobase 1.30.1 ──── 2021-05-16T20:39:35.7931976Z Duration: 2m 27.6s 2021-05-16T20:39:35.7933585Z 2021-05-16T20:39:35.7944920Z 0 errors ✔ | 0 warnings ✔ | 0 notes ✔ 2021-05-16T20:39:35.8015521Z total 1604 2021-05-16T20:39:35.8016667Z drwxr-xr-x 6 runner docker 4096 May 16 20:39 neurobase.Rcheck 2021-05-16T20:39:35.8017632Z -rw-r--r-- 1 runner docker 691904 May 16 20:37 neurobase_1.30.1.tar.gz 2021-05-16T20:39:35.8018699Z -rw-r--r-- 1 runner docker 943630 May 16 20:37 neurobase_1.30.1_R_x86_64-pc-linux-gnu.tar.gz 2021-05-16T20:39:35.8056002Z ##[group]Run find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-05-16T20:39:35.8056700Z find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-05-16T20:39:35.8165988Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-05-16T20:39:35.8166470Z env: 2021-05-16T20:39:35.8166893Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:39:35.8167323Z TIC_DEPLOY_KEY: 2021-05-16T20:39:35.8168091Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:39:35.8169863Z GITHUB_PAT: *** 2021-05-16T20:39:35.8170249Z COVERALLS_TOKEN: 2021-05-16T20:39:35.8170687Z continue-on-error: true 2021-05-16T20:39:35.8171130Z VDIFFR_RUN_TESTS: 2021-05-16T20:39:35.8171584Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:39:35.8172002Z TZ: UTC 2021-05-16T20:39:35.8172548Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:39:35.8172923Z NOT_CRAN: true 2021-05-16T20:39:35.8173282Z ##[endgroup] 2021-05-16T20:39:35.8263426Z 2021-05-16T20:39:35.8264874Z R Under development (unstable) (2021-05-14 r80296) -- "Unsuffered Consequences" 2021-05-16T20:39:35.8265819Z Copyright (C) 2021 The R Foundation for Statistical Computing 2021-05-16T20:39:35.8266633Z Platform: x86_64-pc-linux-gnu (64-bit) 2021-05-16T20:39:35.8266967Z 2021-05-16T20:39:35.8267529Z R is free software and comes with ABSOLUTELY NO WARRANTY. 2021-05-16T20:39:35.8268294Z You are welcome to redistribute it under certain conditions. 2021-05-16T20:39:35.8269261Z Type 'license()' or 'licence()' for distribution details. 2021-05-16T20:39:35.8269649Z 2021-05-16T20:39:35.8270190Z R is a collaborative project with many contributors. 2021-05-16T20:39:35.8271025Z Type 'contributors()' for more information and 2021-05-16T20:39:35.8271883Z 'citation()' on how to cite R or R packages in publications. 2021-05-16T20:39:35.8272270Z 2021-05-16T20:39:35.8272942Z Type 'demo()' for some demos, 'help()' for on-line help, or 2021-05-16T20:39:35.8273757Z 'help.start()' for an HTML browser interface to help. 2021-05-16T20:39:35.8274389Z Type 'q()' to quit R. 2021-05-16T20:39:35.8274641Z 2021-05-16T20:39:35.8274997Z > library(testthat) 2021-05-16T20:39:35.8275437Z > library(neurobase) 2021-05-16T20:39:35.8275954Z Loading required package: oro.nifti 2021-05-16T20:39:35.8276425Z oro.nifti 0.10.3 2021-05-16T20:39:35.8276738Z > 2021-05-16T20:39:35.8277138Z > test_check("neurobase") 2021-05-16T20:39:35.8277639Z [ FAIL 0 | WARN 0 | SKIP 0 | PASS 58 ] 2021-05-16T20:39:35.8277990Z > 2021-05-16T20:39:35.8278279Z > 2021-05-16T20:39:35.8278664Z > # copyNIfTIHeader 2021-05-16T20:39:35.8279096Z > # double_ortho 2021-05-16T20:39:35.8279613Z > # getEmptyImageDimensions 2021-05-16T20:39:35.8280128Z > # get_empty_dim 2021-05-16T20:39:35.8280824Z > # maskEmptyImageDimensions 2021-05-16T20:39:35.8281359Z > # mask_empty_dim 2021-05-16T20:39:35.8281712Z > # mask_img 2021-05-16T20:39:35.8282084Z > # multi_overlay 2021-05-16T20:39:35.8282432Z > # newnii 2021-05-16T20:39:35.8282785Z > # niftiarr 2021-05-16T20:39:35.8283135Z > # nii.stub 2021-05-16T20:39:35.8283479Z > # ortho2 2021-05-16T20:39:35.8283835Z > # ortho_diff 2021-05-16T20:39:35.8284198Z > # parse_img_ext 2021-05-16T20:39:35.8284588Z > # quantile_img 2021-05-16T20:39:35.8284971Z > # readNIfTI2 2021-05-16T20:39:35.8285343Z > # readnii 2021-05-16T20:39:35.8285694Z > # remake_img 2021-05-16T20:39:35.8286156Z > # replace_dropped_dimensions 2021-05-16T20:39:35.8286598Z > # rescale_img 2021-05-16T20:39:35.8286988Z > # robust_window 2021-05-16T20:39:35.8287343Z > # same_dims 2021-05-16T20:39:35.8287695Z > # tempimg 2021-05-16T20:39:35.8288042Z > # window_img 2021-05-16T20:39:35.8288427Z > # writeNIfTI2 2021-05-16T20:39:35.8288811Z > # writenii 2021-05-16T20:39:35.8289134Z > # xyz 2021-05-16T20:39:35.8289471Z > # zero_pad 2021-05-16T20:39:35.8289807Z > # zlimmer 2021-05-16T20:39:35.8290165Z > # zscore_img 2021-05-16T20:39:35.8290467Z > 2021-05-16T20:39:35.8290809Z > proc.time() 2021-05-16T20:39:35.8291233Z user system elapsed 2021-05-16T20:39:35.8291736Z 1.415 0.081 1.565 2021-05-16T20:39:35.8324829Z ##[group]Run Rscript -e "tic::before_deploy()" 2021-05-16T20:39:35.8325360Z Rscript -e "tic::before_deploy()" 2021-05-16T20:39:35.8360900Z shell: /usr/bin/bash -e {0} 2021-05-16T20:39:35.8361252Z env: 2021-05-16T20:39:35.8361672Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:39:35.8362094Z TIC_DEPLOY_KEY: 2021-05-16T20:39:35.8362855Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:39:35.8364032Z GITHUB_PAT: *** 2021-05-16T20:39:35.8364403Z COVERALLS_TOKEN: 2021-05-16T20:39:35.8364838Z continue-on-error: true 2021-05-16T20:39:35.8365274Z VDIFFR_RUN_TESTS: 2021-05-16T20:39:35.8365723Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:39:35.8366131Z TZ: UTC 2021-05-16T20:39:35.8366494Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:39:35.8366865Z NOT_CRAN: true 2021-05-16T20:39:35.8367222Z ##[endgroup] 2021-05-16T20:39:36.0830875Z ✔ Loading tic stage configuration from tic.R 2021-05-16T20:39:36.1994731Z ##[group]Run actions/upload-release-asset@v1.0.1 2021-05-16T20:39:36.1995241Z with: 2021-05-16T20:39:36.1996037Z upload_url: https://uploads.github.com/repos/neuroconductor/neurobase/releases/43020192/assets{?name,label} 2021-05-16T20:39:36.1997001Z asset_path: check/neurobase_1.30.1_R_x86_64-pc-linux-gnu.tar.gz 2021-05-16T20:39:36.1997676Z asset_name: neurobase_1.30.1_R_x86_64-pc-linux-gnu_R4.1.tar.gz 2021-05-16T20:39:36.1998294Z asset_content_type: application/octet-stream 2021-05-16T20:39:36.1998752Z env: 2021-05-16T20:39:36.1999149Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:39:36.1999580Z TIC_DEPLOY_KEY: 2021-05-16T20:39:36.2000328Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:39:36.2001816Z GITHUB_PAT: *** 2021-05-16T20:39:36.2002198Z COVERALLS_TOKEN: 2021-05-16T20:39:36.2002636Z continue-on-error: true 2021-05-16T20:39:36.2003078Z VDIFFR_RUN_TESTS: 2021-05-16T20:39:36.2003554Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:39:36.2003954Z TZ: UTC 2021-05-16T20:39:36.2004316Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:39:36.2004705Z NOT_CRAN: true 2021-05-16T20:39:36.2005583Z GITHUB_TOKEN: *** 2021-05-16T20:39:36.2005946Z ##[endgroup] 2021-05-16T20:39:36.7582667Z ##[group]Run Rscript -e "tic::deploy()" 2021-05-16T20:39:36.7583184Z Rscript -e "tic::deploy()" 2021-05-16T20:39:36.7626244Z shell: /usr/bin/bash -e {0} 2021-05-16T20:39:36.7626616Z env: 2021-05-16T20:39:36.7627026Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:39:36.7627468Z TIC_DEPLOY_KEY: 2021-05-16T20:39:36.7628215Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:39:36.7629686Z GITHUB_PAT: *** 2021-05-16T20:39:36.7630165Z COVERALLS_TOKEN: 2021-05-16T20:39:36.7630618Z continue-on-error: true 2021-05-16T20:39:36.7631044Z VDIFFR_RUN_TESTS: 2021-05-16T20:39:36.7631499Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:39:36.7631917Z TZ: UTC 2021-05-16T20:39:36.7632265Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:39:36.7632653Z NOT_CRAN: true 2021-05-16T20:39:36.7632991Z ##[endgroup] 2021-05-16T20:39:37.0141650Z ✔ Loading tic stage configuration from tic.R 2021-05-16T20:39:37.1326732Z ##[group]Run Rscript -e "tic::after_deploy()" 2021-05-16T20:39:37.1327275Z Rscript -e "tic::after_deploy()" 2021-05-16T20:39:37.1369069Z shell: /usr/bin/bash -e {0} 2021-05-16T20:39:37.1369442Z env: 2021-05-16T20:39:37.1369846Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T20:39:37.1370288Z TIC_DEPLOY_KEY: 2021-05-16T20:39:37.1371042Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T20:39:37.1373256Z GITHUB_PAT: *** 2021-05-16T20:39:37.1373659Z COVERALLS_TOKEN: 2021-05-16T20:39:37.1374101Z continue-on-error: true 2021-05-16T20:39:37.1374546Z VDIFFR_RUN_TESTS: 2021-05-16T20:39:37.1374987Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T20:39:37.1375406Z TZ: UTC 2021-05-16T20:39:37.1375757Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T20:39:37.1376143Z NOT_CRAN: true 2021-05-16T20:39:37.1376483Z ##[endgroup] 2021-05-16T20:39:37.3887288Z ✔ Loading tic stage configuration from tic.R 2021-05-16T20:39:37.6514770Z Post job cleanup. 2021-05-16T20:39:37.6919956Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-05-16T20:39:37.7038774Z Post job cleanup. 2021-05-16T20:39:37.8013261Z [command]/usr/bin/git version 2021-05-16T20:39:37.8068057Z git version 2.31.1 2021-05-16T20:39:37.8099169Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-05-16T20:39:37.8143623Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-05-16T20:39:37.8387903Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-05-16T20:39:37.8419563Z http.https://github.com/.extraheader 2021-05-16T20:39:37.8428867Z [command]/usr/bin/git config --local --unset-all http.https://github.com/.extraheader 2021-05-16T20:39:37.8469474Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-05-16T20:39:37.8726739Z Cleaning up orphan processes