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BM()
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Slow R-based Brunner-Munzel tests |
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BMfast()
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Fast Brunner-Munzel tests (v1) |
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BMfast2()
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Fast Brunner-Munzel tests (v2) |
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BMfast2_dualmatrix()
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Fast Brunner-Munzel tests (v2) - dual matrix |
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BMperm()
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Fast Brunner-Munzel tests (v2) with permutations |
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TTfast()
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TTfast |
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checkAntsInput()
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Determine type of variable passed by user |
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checkAssumptions_ttest()
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Check t-test assumptions at each voxel |
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checkFilenameHeaders()
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Check headers of files stored on disk |
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checkImageList()
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Check headers of list of antsImages |
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checkMask()
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Compare headers between mask and other images |
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.createFolds()
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Create folds for k-fold validation |
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getLesionLoad()
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Compute regional lesion load |
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getLesionSize()
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Lesion size computation |
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getUniqueLesionPatches()
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Compute unique lesion patches |
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lesyload_mricron()
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Get inputs from MRIcron/npm file |
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lesymap()
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Lesion to Symptom Mapping |
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lesymap.predict()
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Prediction of new cases from lesymap output |
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lsm_BM()
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Brunner-Munzel tests for symptom mapping (slow) |
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lsm_BMfast()
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Brunner-Munzel tests for symptom mapping (fast) |
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lsm_chisq()
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Chi square tests for symptom mapping |
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lsm_regres()
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Regression tests for symptom mapping (slow) |
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lsm_regresPerm()
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Regression tests for symptom mapping (permutation p-vlaues) |
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lsm_regresfast()
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Regression tests for symptom mapping (fast) |
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lsm_sccan()
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Sparse canonical correlations for symptom mapping |
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lsm_svr()
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Support Vector Regression for symptom mapping |
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lsm_ttest()
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T-tests for symptom mapping (slow) |
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lsm_ttestFast()
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T-tests for symptom mapping (fast) |
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minSegDistance()
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Metric displacement of binary masks |
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optimize_SCCANsparseness()
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Optimization of SCCAN sparseness |
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print(<lesymap>)
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Console print of lesymap object |
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printInfo()
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Display info messages in console |
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registerLesionToTemplate()
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Register lesions in template space |
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regresfast()
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Fast linear regressions |
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save.lesymap()
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Save the output of lesymap. |
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simulateBehavior()
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Simulation of behavior scores from lesion maps |