Package ichseg details

Intracerebral Hemorrhage Segmentation of X-Ray Computed Tomography (CT) Images

Performs preprocessing on computed tomography (CT) scans, including skull stripping. Computes predictors of intracerebral hemorrhage (ICH) and uses these to predict a binary hemorrhage mask from the data.

Maintainer: John Muschelli < muschellij2 at gmail.com >

From within R, enter citation(ichseg)

Muschelli J, Sweeney EM, Ullman NL, Vespa P, Hanley DF, Crainiceanu CM
(2017). "PItcHPERFeCT: Primary Intracranial Hemorrhage Probability
Estimation using Random Forests on CT." _NeuroImage: Clinical_, *14*,
379-390.

A BibTeX entry for LaTeX users is

@Article{muschelli2017pitchperfect,
title = {{PItcHPERFeCT}: Primary Intracranial Hemorrhage Probability Estimation using Random Forests on {CT}},
author = {John Muschelli and Elizabeth M Sweeney and Natalie L Ullman and Paul Vespa and Daniel F Hanley and Ciprian M Crainiceanu},
journal = {NeuroImage: Clinical},
volume = {14},
pages = {379--390},
year = {2017},
publisher = {Elsevier},
}

If you have any problems with this package you can open a new issue or check the already existing ones here.

To install this package, start R and enter:

source("https://neuroconductor.org/neurocLite.R")

# Default Install
neuro_install('ichseg')

# From the Binary Repo in NeuroC
neuro_install('ichseg', release = "stable", release_repo = binary_release_repo(release = "stable"))
neuro_install('ichseg', release = "current", release_repo = binary_release_repo(release = "current"))

# from GitHub
neuro_install('ichseg', release = "stable", release_repo = "github")
neuro_install('ichseg', release = "current", release_repo = "github")

More detailed installation instructions can be found here.