Package robex details

Robust Brain Extraction ('ROBEX')

Wrapper for Robust Brain Extraction ('ROBEX') algorithm . Provides the binary distributions from 'NITRC'.

Maintainer: John Muschelli < muschellij2 at gmail.com >

 
From within R, enter citation(robex)


Iglesias JE, Liu C, Thompson PM, Tu Z (2011). "Robust brain extraction
across datasets and comparison with publicly available methods." _IEEE
transactions on medical imaging_, *30*(9), 1617-1634.

A BibTeX entry for LaTeX users is

@Article{iglesias2011robust,
title = {Robust brain extraction across datasets and comparison with publicly available methods},
author = {Juan Eugenio Iglesias and Cheng-Yi Liu and Paul M Thompson and Zhuowen Tu},
journal = {IEEE transactions on medical imaging},
volume = {30},
number = {9},
pages = {1617--1634},
year = {2011},
publisher = {IEEE},
}

 

If you have any problems with this package you can open a new issue or check the already existing ones here.

 
 
To install this package, start R and enter:

source("https://neuroconductor.org/neurocLite.R")

# use release_versions() to find previous releases
neuro_install('robex', release_repo= 'https://neuroconductor.org/releases/2018/feb')

# Default Install
neuro_install('robex')

# From the Binary Repo in NeuroC
neuro_install('robex', release = "stable", release_repo = binary_release_repo(release = "stable"))
neuro_install('robex', release = "current", release_repo = binary_release_repo(release = "current"))

# from GitHub
neuro_install('robex', release = "stable", release_repo = "github")
neuro_install('robex', release = "current", release_repo = "github")

More detailed installation instructions can be found here.

 

Initially submitted on October 16 2018 10:09AM
Last updated on February 3 2019 12:01AM
Package type standard
Source GitHub https://github.com/muschellij2/robex GitHub
Neuroconductor GitHub https://github.com/neuroconductor/robex GitHub
System requirementsgit, cmake
Importsneurobase, ITKR
Suggestsknitr, rmarkdown, covr, testthat, kirby21.t1