Plot a slice from a 7 dimensional array.

Source: R/mrs_data_display.R

Plot a slice from a 7 dimensional array.

plot_slice_map(
  data,
  zlim = NULL,
  mask_map = NULL,
  mask_cutoff = 20,
  interp = 1,
  slice = 1,
  dyn = 1,
  coil = 1,
  ref = 1,
  denom = NULL,
  horizontal = FALSE
)

Arguments

data

7d array of values to be plotted.
zlim

smallest and largest values to be plotted.
mask_map

matching map with logical values to indicate if the corresponding values should be plotted.
mask_cutoff

minimum values to plot (as a percentage of the maximum).
interp

map interpolation factor.
slice

the slice index to plot.
dyn

the dynamic index to plot.
coil

the coil element number to plot.
ref

reference index to plot.
denom

map to use as a denominator.
horizontal

display the colourbar horizontally (logical).