All functions

CompCor()

Anatomical CompCor

CompCor_HCP()

Anatomical CompCor for HCP NIFTI and CIFTI data

DVARS()

DVARS

Dat1

First Example Time Series from the ABIDE

Dat2

Second Example Time Series from the ABIDE

FD()

Framewise Displacement

artifact_images()

Artifact images

dct_bases()

Cosine bases for the DCT

dct_convert()

Convert between number of DCT bases and Hz of highpass filter

erode_vol()

Erode volumetric mask

fMRIscrub

fMRIscrub: fMRI scrubbing and other data cleaning routines

fsl_bptf()

bptf function from FSL

fusedPCA()

Fused PCA (C++ core)

high_kurtosis()

Which components have high kurtosis?

leverage()

Leverage

nuisance_regression()

Nuisance regression

pct_sig()

Convert data values to percent signal.

plot(<scrub_DVARS>)

Plot a "scrub_DVARS" object

plot(<scrub_FD>)

Plot a "scrub_FD" object

plot(<scrub_projection>)

Plot a "scrub_projection" object

pscrub()

Projection scrubbing

rob_scale()

Stabilize the center and scale of a timeseries robustly

scale_med()

Scale data columns robustly

scrub()

Data-driven scrubbing

scrub_xifti()

Scrub fMRI data in CIFTI format

summary(<scrub_DVARS>) print(<summary.scrub_DVARS>) print(<scrub_DVARS>)

Summarize a "scrub_DVARS" object

summary(<scrub_FD>) print(<summary.scrub_FD>) print(<scrub_FD>)

Summarize a "scrub_FD" object

summary(<scrub_projection>) print(<summary.scrub_projection>) print(<scrub_projection>)

Summarize a "scrub_projection" object

unmask_vol()

Undo a volumetric mask