SMRI Z-score compared to a Template

SMRI Z-score compared to a Template

template_z_score(x, mask = NULL, template = "Eve", mean_imgs = NULL,
  sd_imgs = NULL, outdir = tempdir(), verbose = TRUE,
  remask = TRUE, lower_value = -20, upper_value = 20,
  add_const = TRUE, interpolator = "lanczosWindowedSinc",
  suffix = "_ztemp")

Arguments

x	List of images
mask	mask to place all non-mask values to zero
template	Template of the space of the mean/SD images, only currently accepts Eve.
mean_imgs	A vector/list of images for measures of centrality - usually the mean. See download_template_img_data
sd_imgs	A vector/list of images for measures of spread - usually the standard deviation. See download_template_img_data#'
outdir	Output directory
verbose	print diagnostic messages
remask	should mask_img be applied to the output images after normalization
lower_value	Lower value to winsorize the z-score to. With small standard deviations, the values can get far outside of a standard range.
upper_value	upper value to winsorize the z-score to. With small standard deviations, the values can get far outside of a standard range.
add_const	Should a constant be added to the T1 image; without this, the registration may fail
interpolator	Interpolation done, passed to registration
suffix	what the append to end of the output filename

Value

List of images