Spatially Normalize SMRI data

Spatially Normalize SMRI data

spatial_normalize(prenormalize, template = c("none", "Eve", "MNI"),
  verbose = TRUE, typeofTransform = "SyN",
  interpolator = "lanczosWindowedSinc",
  dis_interpolator = "genericLabel", copy_origin = TRUE)

Arguments

prenormalize

list from smri_prenormalize
template

Resampling to 1x1x1 (template = none) or Template to register to - either MNI or Eve template
verbose

print diagnostic messages
typeofTransform

Transformation to use for registration, passed to registration
interpolator

Interpolation done, passed to registration
dis_interpolator

Interpolation done, passed to registration for discrete data
copy_origin

Copy image origin from image being registered, using antsCopyOrigin

Value

List of images, suffix, brain mask, gold standard, and registration if applicable