Skull Strip image

Skull Strip image

n4_skull_strip(file, template = penn115_image_fname(),
  template_mask = penn115_brain_mask_fname(), verbose = TRUE,
  pad = TRUE, n_iter = 2)

Arguments

file

Filename of T1 image
template

Template full image
template_mask

Template brain mask
verbose

print diagnostic messages
pad

should zero padding be done
n_iter

Number of iterations undergone with abpN4 and abpBrainExtraction

Value

A list of output images, brain and corrected