Using the Penn115 atlas
John Muschelli
2021-05-17
Source:vignettes/using_penn115.Rmd
using_penn115.RmdRead in the Penn115 Template
The Penn immages include a brain mask and an image. We will read them in and display them:
library(penn115)
library(neurobase)
#> Loading required package: oro.nifti
#> oro.nifti 0.11.0
img = penn115::penn115_image()
mask = penn115::penn115_brain_mask()
neurobase::ortho2(img, mask, col.y = "#FF000080")
brain = penn115::penn115_brain()
neurobase::ortho2(brain)