Takes an image, finds the quantiles given by probs, then sets values outside these values to other values, as determined by replace argument passed to to window_img

robust_window(img, non_zero = FALSE, probs = c(0, 0.999), ..., mask = NULL)

Arguments

img

object of class nifti

non_zero

Should zeroes be excluded from the calculation of quantiles?

probs

quantiles to constrain the image these define the window sent to window_img

...

additional arguments sent to window_img

mask

binary image to use to to calculate quantiles

Value

Object of class nifti with values outside quantiles replaced by values depending on replace argument passed to window_img