Function reference • ichseg

All functions
`CT_Skull_Strip()`	CT Skull Stripping within R
`CT_Skull_Strip_robust()` `CT_Skull_Strip_register()` `CT_Skull_Strip_smooth()`	Robust CT Skull Stripping
`CT_Skull_Stripper()` `CT_Skull_Stripper_mask()`	CT Skull Stripping Wrapper
`biometric_mask()` `ct_biometric_mask()` `mri_biometric_mask()`	Estimate Biometric Masks
`create_ct_head_mask()` `segment_ct_head()`	Create CT Head Mask
`ct_dcm2nii()`	CT DICOM to NIfTI conversion
`ct_template()`	Read in CT Template
`ct_template_fname()`	Get CT Template Filename
`download_deepbleed_model()` `load_deepbleed_model()` `predict_deepbleed()`	DeepBleed Model
`dil_ero()`	Fill image holes with dilation then erosion
`ct_ear_mask()` `mri_ear_mask()`	Create Mask of the Ears
`est.cutoffs` `big_est.cutoffs`	Estimated Cutoffs for ICH
`ct_face_mask()` `mri_face_mask()`	Create Mask of the Face
`get_neighbors()`	Calculate Moments of Neighborhood
`ich_candidate_voxels()`	Create ICH Segmentation Candidate Voxesl
`ich_predict()`	Predict ICH Images
`ich_preprocess()` `ich_cnn_preprocess()`	Preprocess data for ICH Segmentation
`ich_segment()` `ich_process_predictors()`	Predict ICH Segmentation
`ich_train_data()`	Create ICH Train Data
`ich_train_model()`	ICH Train Model
`local_moment()`	Calculate Moments of Neighborhood
`logistic_modlist`	Estimated Logistic Model List for ICH
`make_predictors()`	Make CT Predictors
`mean_image()`	Calculate Mean Image by FFT
`rf_modlist` `big_rf_modlist`	Estimated Random Forest Model List for ICH
`smoothed_logistic_cutoffs`	Estimated Logistic Model List of Cutoffs for Smoothed Data for ICH
`smoothed_rf_cutoffs` `smoothed_big_rf_cutoffs`	Estimated Random Forest List of Cutoffs for Smoothed Data for ICH

Reference

All functions