Reconstruction from Freesurfer for All Steps

Source: R/recon_all.R

Reconstruction from Freesurfer for All Steps

recon_all(
  infile = NULL,
  outdir = NULL,
  subjid = NULL,
  verbose = TRUE,
  opts = "-all",
  ...
)

Arguments

infile

Input filename (dcm or nii)
outdir

Output directory
subjid

subject id
verbose

print diagnostic messages
opts

Additional options
...

arguments passed to reconner

Value

Result of system

Note

If you would like to restart a recon-all run, change opts so that opts = "-make all"