Example of making a ventricle mask, to be used if Freesurfer is not available or needed before using afni_proc.py
afni_tt_vent_mask(dxyz = rep(2.5, 3), ...)| dxyz | Dimensions to Resample the Image |
|---|---|
| ... | additional arguments passed to |
An object of class nifti, unless retimg = FALSE in
...
See
https://afni.nimh.nih.gov/pub/dist/doc/program_help/afni_proc.py.html
for example. This code uses TT_desai_dd_mpm+tlrc