Neuroconductor Tutorials

Guides

• Guides for Developers
  1. Preparing Your Package for Submission
  2. Changes to your Package
• NIfTI Basics

FAQs

• Frequently Asked Questions (FAQ)

Package Installation Guides

• Installing devtools
• Installing ANTsR

Data Guides

• Downloading Human Connectome Project Data
• Downloading Functional Connectomes Projects

Structural Imaging

1. Brain Extraction
2. Tissue-Class Segmentation
3. Labeling Brain Structures
4. Processing Within-Visit Structural MRI
5. Cortical Thickness Estimation (NOT DONE)

fMRI

1. Resting-State fMRI analysis using ANTsR
2. Resting-State fMRI analysis using fslr
3. Resting-State fMRI analysis using spm12r

DTI

1. DTI analysis with fslr
2. DTI analysis with Camino
3. DTI analysis with Camino with HCP data

Disease-specific Tutorials

1. Multiple Sclerosis Lesion Segmentation