2021-05-18T14:09:09.7239224Z ##[section]Starting: Request a runner to run this job 2021-05-18T14:09:10.5627513Z Can't find any online and idle self-hosted runner in current repository that matches the required labels: 'ubuntu-20.04' 2021-05-18T14:09:10.6319318Z Can't find any online and idle self-hosted runner in current repository's organization/enterprise account that matches the required labels: 'ubuntu-20.04' 2021-05-18T14:09:10.7354180Z Found online and idle hosted runner in current repository's enterprise account that matches the required labels: 'ubuntu-20.04' 2021-05-18T14:09:10.8969633Z ##[section]Finishing: Request a runner to run this job 2021-05-18T14:09:33.6706936Z Current runner version: '2.278.0' 2021-05-18T14:09:33.6733871Z ##[group]Operating System 2021-05-18T14:09:33.6734831Z Ubuntu 2021-05-18T14:09:33.6735270Z 20.04.2 2021-05-18T14:09:33.6735764Z LTS 2021-05-18T14:09:33.6736259Z ##[endgroup] 2021-05-18T14:09:33.6736782Z ##[group]Virtual Environment 2021-05-18T14:09:33.6737471Z Environment: ubuntu-20.04 2021-05-18T14:09:33.6737988Z Version: 20210510.0 2021-05-18T14:09:33.6738992Z Included Software: https://github.com/actions/virtual-environments/blob/ubuntu20/20210510.0/images/linux/Ubuntu2004-README.md 2021-05-18T14:09:33.6740331Z Image Release: https://github.com/actions/virtual-environments/releases/tag/ubuntu20%2F20210510.0 2021-05-18T14:09:33.6741156Z ##[endgroup] 2021-05-18T14:09:33.6743019Z ##[group]GITHUB_TOKEN Permissions 2021-05-18T14:09:33.6744264Z Actions: write 2021-05-18T14:09:33.6744788Z Checks: write 2021-05-18T14:09:33.6745278Z Contents: write 2021-05-18T14:09:33.6745829Z Deployments: write 2021-05-18T14:09:33.6746477Z Issues: write 2021-05-18T14:09:33.6747010Z Metadata: read 2021-05-18T14:09:33.6747492Z Packages: write 2021-05-18T14:09:33.6748072Z PullRequests: write 2021-05-18T14:09:33.6748734Z RepositoryProjects: write 2021-05-18T14:09:33.6749345Z SecurityEvents: write 2021-05-18T14:09:33.6749911Z Statuses: write 2021-05-18T14:09:33.6750513Z ##[endgroup] 2021-05-18T14:09:33.6753648Z Prepare workflow directory 2021-05-18T14:09:33.7725706Z Prepare all required actions 2021-05-18T14:09:33.7736537Z Getting action download info 2021-05-18T14:09:34.2504728Z Download action repository 'actions/checkout@v2' 2021-05-18T14:09:35.9145958Z Download action repository 'r-lib/actions@master' 2021-05-18T14:09:36.3650564Z Download action repository 'adigherman/actions@master' 2021-05-18T14:09:37.4101958Z Download action repository 'msys2/setup-msys2@v2' 2021-05-18T14:09:37.5736463Z Download action repository 'actions/cache@v1' 2021-05-18T14:09:37.7440018Z Download action repository 'actions/upload-artifact@master' 2021-05-18T14:09:37.9046981Z Download action repository 'actions/upload-release-asset@v1.0.1' 2021-05-18T14:09:39.0801023Z ##[group]Run actions/checkout@v2 2021-05-18T14:09:39.0801607Z with: 2021-05-18T14:09:39.0802055Z repository: neuroconductor/RAVEL 2021-05-18T14:09:39.0802988Z token: *** 2021-05-18T14:09:39.0803359Z ssh-strict: true 2021-05-18T14:09:39.0803838Z persist-credentials: true 2021-05-18T14:09:39.0804279Z clean: true 2021-05-18T14:09:39.0804643Z fetch-depth: 1 2021-05-18T14:09:39.0804997Z lfs: false 2021-05-18T14:09:39.0805361Z submodules: false 2021-05-18T14:09:39.0805718Z env: 2021-05-18T14:09:39.0806115Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:09:39.0806562Z TIC_DEPLOY_KEY: 2021-05-18T14:09:39.0807319Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:09:39.0808437Z GITHUB_PAT: *** 2021-05-18T14:09:39.0809194Z COVERALLS_TOKEN: *** 2021-05-18T14:09:39.0809647Z continue-on-error: true 2021-05-18T14:09:39.0810098Z VDIFFR_RUN_TESTS: 2021-05-18T14:09:39.0810471Z ##[endgroup] 2021-05-18T14:09:39.7493470Z Syncing repository: neuroconductor/RAVEL 2021-05-18T14:09:39.7494257Z ##[group]Getting Git version info 2021-05-18T14:09:39.7495200Z Working directory is '/home/runner/work/RAVEL/RAVEL' 2021-05-18T14:09:39.7495790Z [command]/usr/bin/git version 2021-05-18T14:09:39.7496217Z git version 2.31.1 2021-05-18T14:09:39.7496985Z ##[endgroup] 2021-05-18T14:09:39.7497672Z Deleting the contents of '/home/runner/work/RAVEL/RAVEL' 2021-05-18T14:09:39.7498735Z ##[group]Initializing the repository 2021-05-18T14:09:39.7499330Z [command]/usr/bin/git init /home/runner/work/RAVEL/RAVEL 2021-05-18T14:09:39.7500222Z hint: Using 'master' as the name for the initial branch. This default branch name 2021-05-18T14:09:39.7500997Z hint: is subject to change. To configure the initial branch name to use in all 2021-05-18T14:09:39.7502126Z hint: of your new repositories, which will suppress this warning, call: 2021-05-18T14:09:39.7502730Z hint: 2021-05-18T14:09:39.7503549Z hint: git config --global init.defaultBranch 2021-05-18T14:09:39.7504477Z hint: 2021-05-18T14:09:39.7505287Z hint: Names commonly chosen instead of 'master' are 'main', 'trunk' and 2021-05-18T14:09:39.7506341Z hint: 'development'. The just-created branch can be renamed via this command: 2021-05-18T14:09:39.7507012Z hint: 2021-05-18T14:09:39.7507623Z hint: git branch -m 2021-05-18T14:09:39.7508347Z Initialized empty Git repository in /home/runner/work/RAVEL/RAVEL/.git/ 2021-05-18T14:09:39.7509299Z [command]/usr/bin/git remote add origin https://github.com/neuroconductor/RAVEL 2021-05-18T14:09:39.7510093Z ##[endgroup] 2021-05-18T14:09:39.7510721Z ##[group]Disabling automatic garbage collection 2021-05-18T14:09:39.7511591Z [command]/usr/bin/git config --local gc.auto 0 2021-05-18T14:09:39.7512163Z ##[endgroup] 2021-05-18T14:09:39.7513735Z ##[group]Setting up auth 2021-05-18T14:09:39.7514705Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-05-18T14:09:39.7516207Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-05-18T14:09:39.7517774Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-05-18T14:09:39.7519815Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-05-18T14:09:39.7521679Z [command]/usr/bin/git config --local http.https://github.com/.extraheader AUTHORIZATION: basic *** 2021-05-18T14:09:39.7522566Z ##[endgroup] 2021-05-18T14:09:39.7523137Z ##[group]Fetching the repository 2021-05-18T14:09:39.7525282Z [command]/usr/bin/git -c protocol.version=2 fetch --no-tags --prune --progress --no-recurse-submodules --depth=1 origin +724ec1f56f70908557a8096412b91d4543be5b3b:refs/tags/1.2.2.s 2021-05-18T14:09:39.7526534Z remote: Enumerating objects: 69, done. 2021-05-18T14:09:39.7531957Z remote: Counting objects: 1% (1/69) 2021-05-18T14:09:39.7532596Z remote: Counting objects: 2% (2/69) 2021-05-18T14:09:39.7533205Z remote: Counting objects: 4% (3/69) 2021-05-18T14:09:39.7533813Z remote: Counting objects: 5% (4/69) 2021-05-18T14:09:39.7534395Z remote: Counting objects: 7% (5/69) 2021-05-18T14:09:39.7534997Z remote: Counting objects: 8% (6/69) 2021-05-18T14:09:39.7535596Z remote: Counting objects: 10% (7/69) 2021-05-18T14:09:39.7536178Z remote: Counting objects: 11% (8/69) 2021-05-18T14:09:39.7536770Z remote: Counting objects: 13% (9/69) 2021-05-18T14:09:39.7537371Z remote: Counting objects: 14% (10/69) 2021-05-18T14:09:39.7537956Z remote: Counting objects: 15% (11/69) 2021-05-18T14:09:39.7538565Z remote: Counting objects: 17% (12/69) 2021-05-18T14:09:39.7539161Z remote: Counting objects: 18% (13/69) 2021-05-18T14:09:39.7539752Z remote: Counting objects: 20% (14/69) 2021-05-18T14:09:39.7540348Z remote: Counting objects: 21% (15/69) 2021-05-18T14:09:39.7540948Z remote: Counting objects: 23% (16/69) 2021-05-18T14:09:39.7541554Z remote: Counting objects: 24% (17/69) 2021-05-18T14:09:39.7542148Z remote: Counting objects: 26% (18/69) 2021-05-18T14:09:39.7542739Z remote: Counting objects: 27% (19/69) 2021-05-18T14:09:39.7543323Z remote: Counting objects: 28% (20/69) 2021-05-18T14:09:39.7543913Z remote: Counting objects: 30% (21/69) 2021-05-18T14:09:39.7544512Z remote: Counting objects: 31% (22/69) 2021-05-18T14:09:39.7545094Z remote: Counting objects: 33% (23/69) 2021-05-18T14:09:39.7545705Z remote: Counting objects: 34% (24/69) 2021-05-18T14:09:39.7546309Z remote: Counting objects: 36% (25/69) 2021-05-18T14:09:39.7546890Z remote: Counting objects: 37% (26/69) 2021-05-18T14:09:39.7547484Z remote: Counting objects: 39% (27/69) 2021-05-18T14:09:39.7548212Z remote: Counting objects: 40% (28/69) 2021-05-18T14:09:39.7548799Z remote: Counting objects: 42% (29/69) 2021-05-18T14:09:39.7549392Z remote: Counting objects: 43% (30/69) 2021-05-18T14:09:39.7549988Z remote: Counting objects: 44% (31/69) 2021-05-18T14:09:39.7550566Z remote: Counting objects: 46% (32/69) 2021-05-18T14:09:39.7551152Z remote: Counting objects: 47% (33/69) 2021-05-18T14:09:39.7551815Z remote: Counting objects: 49% (34/69) 2021-05-18T14:09:39.7552399Z remote: Counting objects: 50% (35/69) 2021-05-18T14:09:39.7552996Z remote: Counting objects: 52% (36/69) 2021-05-18T14:09:39.7553592Z remote: Counting objects: 53% (37/69) 2021-05-18T14:09:39.7554172Z remote: Counting objects: 55% (38/69) 2021-05-18T14:09:39.7554759Z remote: Counting objects: 56% (39/69) 2021-05-18T14:09:39.7555353Z remote: Counting objects: 57% (40/69) 2021-05-18T14:09:39.7555959Z remote: Counting objects: 59% (41/69) 2021-05-18T14:09:39.7556542Z remote: Counting objects: 60% (42/69) 2021-05-18T14:09:39.7557136Z remote: Counting objects: 62% (43/69) 2021-05-18T14:09:39.7557730Z remote: Counting objects: 63% (44/69) 2021-05-18T14:09:39.7558304Z remote: Counting objects: 65% (45/69) 2021-05-18T14:09:39.7558894Z remote: Counting objects: 66% (46/69) 2021-05-18T14:09:39.7559745Z remote: Counting objects: 68% (47/69) 2021-05-18T14:09:39.7560342Z remote: Counting objects: 69% (48/69) 2021-05-18T14:09:39.7560935Z remote: Counting objects: 71% (49/69) 2021-05-18T14:09:39.7561524Z remote: Counting objects: 72% (50/69) 2021-05-18T14:09:39.7562096Z remote: Counting objects: 73% (51/69) 2021-05-18T14:09:39.7562692Z remote: Counting objects: 75% (52/69) 2021-05-18T14:09:39.7563355Z remote: Counting objects: 76% (53/69) 2021-05-18T14:09:39.7563839Z remote: Counting objects: 78% (54/69) 2021-05-18T14:09:39.7564447Z remote: Counting objects: 79% (55/69) 2021-05-18T14:09:39.7564936Z remote: Counting objects: 81% (56/69) 2021-05-18T14:09:39.7565429Z remote: Counting objects: 82% (57/69) 2021-05-18T14:09:39.7565927Z remote: Counting objects: 84% (58/69) 2021-05-18T14:09:39.7566641Z remote: Counting objects: 85% (59/69) 2021-05-18T14:09:39.7567243Z remote: Counting objects: 86% (60/69) 2021-05-18T14:09:39.7567835Z remote: Counting objects: 88% (61/69) 2021-05-18T14:09:39.7568437Z remote: Counting objects: 89% (62/69) 2021-05-18T14:09:39.7569050Z remote: Counting objects: 91% (63/69) 2021-05-18T14:09:39.7569641Z remote: Counting objects: 92% (64/69) 2021-05-18T14:09:39.7570228Z remote: Counting objects: 94% (65/69) 2021-05-18T14:09:39.7570803Z remote: Counting objects: 95% (66/69) 2021-05-18T14:09:39.7571394Z remote: Counting objects: 97% (67/69) 2021-05-18T14:09:39.7571988Z remote: Counting objects: 98% (68/69) 2021-05-18T14:09:39.7572564Z remote: Counting objects: 100% (69/69) 2021-05-18T14:09:39.7573175Z remote: Counting objects: 100% (69/69), done. 2021-05-18T14:09:39.7573818Z remote: Compressing objects: 1% (1/53) 2021-05-18T14:09:39.7574442Z remote: Compressing objects: 3% (2/53) 2021-05-18T14:09:39.7575083Z remote: Compressing objects: 5% (3/53) 2021-05-18T14:09:39.7575721Z remote: Compressing objects: 7% (4/53) 2021-05-18T14:09:39.7576343Z remote: Compressing objects: 9% (5/53) 2021-05-18T14:09:39.7576983Z remote: Compressing objects: 11% (6/53) 2021-05-18T14:09:39.7577685Z remote: Compressing objects: 13% (7/53) 2021-05-18T14:09:39.7578305Z remote: Compressing objects: 15% (8/53) 2021-05-18T14:09:39.7578958Z remote: Compressing objects: 16% (9/53) 2021-05-18T14:09:39.7579600Z remote: Compressing objects: 18% (10/53) 2021-05-18T14:09:39.7580357Z remote: Compressing objects: 20% (11/53) 2021-05-18T14:09:39.7580996Z remote: Compressing objects: 22% (12/53) 2021-05-18T14:09:39.7581635Z remote: Compressing objects: 24% (13/53) 2021-05-18T14:09:39.7582256Z remote: Compressing objects: 26% (14/53) 2021-05-18T14:09:39.7582883Z remote: Compressing objects: 28% (15/53) 2021-05-18T14:09:39.7583520Z remote: Compressing objects: 30% (16/53) 2021-05-18T14:09:39.7584148Z remote: Compressing objects: 32% (17/53) 2021-05-18T14:09:39.7584782Z remote: Compressing objects: 33% (18/53) 2021-05-18T14:09:39.7585423Z remote: Compressing objects: 35% (19/53) 2021-05-18T14:09:39.7586195Z remote: Compressing objects: 37% (20/53) 2021-05-18T14:09:39.7586833Z remote: Compressing objects: 39% (21/53) 2021-05-18T14:09:39.7587476Z remote: Compressing objects: 41% (22/53) 2021-05-18T14:09:39.7588131Z remote: Compressing objects: 43% (23/53) 2021-05-18T14:09:39.7588766Z remote: Compressing objects: 45% (24/53) 2021-05-18T14:09:39.7589411Z remote: Compressing objects: 47% (25/53) 2021-05-18T14:09:39.7590044Z remote: Compressing objects: 49% (26/53) 2021-05-18T14:09:39.7590663Z remote: Compressing objects: 50% (27/53) 2021-05-18T14:09:39.7591304Z remote: Compressing objects: 52% (28/53) 2021-05-18T14:09:39.7591960Z remote: Compressing objects: 54% (29/53) 2021-05-18T14:09:39.7592584Z remote: Compressing objects: 56% (30/53) 2021-05-18T14:09:39.7593220Z remote: Compressing objects: 58% (31/53) 2021-05-18T14:09:39.7593865Z remote: Compressing objects: 60% (32/53) 2021-05-18T14:09:39.7594485Z remote: Compressing objects: 62% (33/53) 2021-05-18T14:09:39.7595126Z remote: Compressing objects: 64% (34/53) 2021-05-18T14:09:39.7595766Z remote: Compressing objects: 66% (35/53) 2021-05-18T14:09:39.7596384Z remote: Compressing objects: 67% (36/53) 2021-05-18T14:09:39.7597103Z remote: Compressing objects: 69% (37/53) 2021-05-18T14:09:39.7597759Z remote: Compressing objects: 71% (38/53) 2021-05-18T14:09:39.7598386Z remote: Compressing objects: 73% (39/53) 2021-05-18T14:09:39.7599033Z remote: Compressing objects: 75% (40/53) 2021-05-18T14:09:39.7599769Z remote: Compressing objects: 77% (41/53) 2021-05-18T14:09:39.7600581Z remote: Compressing objects: 79% (42/53) 2021-05-18T14:09:39.7601557Z remote: Compressing objects: 81% (43/53) 2021-05-18T14:09:39.7602329Z remote: Compressing objects: 83% (44/53) 2021-05-18T14:09:39.7603014Z remote: Compressing objects: 84% (45/53) 2021-05-18T14:09:39.7603738Z remote: Compressing objects: 86% (46/53) 2021-05-18T14:09:39.7604432Z remote: Compressing objects: 88% (47/53) 2021-05-18T14:09:39.7605110Z remote: Compressing objects: 90% (48/53) 2021-05-18T14:09:39.7605810Z remote: Compressing objects: 92% (49/53) 2021-05-18T14:09:39.7606501Z remote: Compressing objects: 94% (50/53) 2021-05-18T14:09:39.7607172Z remote: Compressing objects: 96% (51/53) 2021-05-18T14:09:39.7607902Z remote: Compressing objects: 98% (52/53) 2021-05-18T14:09:39.7608596Z remote: Compressing objects: 100% (53/53) 2021-05-18T14:09:39.7609383Z remote: Compressing objects: 100% (53/53), done. 2021-05-18T14:09:39.7610537Z remote: Total 69 (delta 15), reused 50 (delta 12), pack-reused 0 2021-05-18T14:09:39.7611340Z From https://github.com/neuroconductor/RAVEL 2021-05-18T14:09:39.7612272Z * [new ref] 724ec1f56f70908557a8096412b91d4543be5b3b -> 1.2.2.s 2021-05-18T14:09:39.7612890Z ##[endgroup] 2021-05-18T14:09:39.7613393Z ##[group]Determining the checkout info 2021-05-18T14:09:39.7613875Z ##[endgroup] 2021-05-18T14:09:39.7614481Z ##[group]Checking out the ref 2021-05-18T14:09:39.7615474Z [command]/usr/bin/git checkout --progress --force refs/tags/1.2.2.s 2021-05-18T14:09:39.7616214Z Note: switching to 'refs/tags/1.2.2.s'. 2021-05-18T14:09:39.7616710Z 2021-05-18T14:09:39.7617672Z You are in 'detached HEAD' state. You can look around, make experimental 2021-05-18T14:09:39.7618449Z changes and commit them, and you can discard any commits you make in this 2021-05-18T14:09:39.7619175Z state without impacting any branches by switching back to a branch. 2021-05-18T14:09:39.7619616Z 2021-05-18T14:09:39.7620276Z If you want to create a new branch to retain commits you create, you may 2021-05-18T14:09:39.7621145Z do so (now or later) by using -c with the switch command. Example: 2021-05-18T14:09:39.7621556Z 2021-05-18T14:09:39.7622472Z git switch -c 2021-05-18T14:09:39.7622822Z 2021-05-18T14:09:39.7623685Z Or undo this operation with: 2021-05-18T14:09:39.7624045Z 2021-05-18T14:09:39.7624515Z git switch - 2021-05-18T14:09:39.7624762Z 2021-05-18T14:09:39.7625351Z Turn off this advice by setting config variable advice.detachedHead to false 2021-05-18T14:09:39.7625858Z 2021-05-18T14:09:39.7626271Z HEAD is now at 724ec1f Version id 82 stable 2021-05-18T14:09:39.7626742Z ##[endgroup] 2021-05-18T14:09:39.7627333Z [command]/usr/bin/git log -1 --format='%H' 2021-05-18T14:09:39.7632422Z '724ec1f56f70908557a8096412b91d4543be5b3b' 2021-05-18T14:09:39.7714607Z ##[group]Run r-lib/actions/setup-r@master 2021-05-18T14:09:39.7715067Z with: 2021-05-18T14:09:39.7715410Z r-version: devel 2021-05-18T14:09:39.7715779Z Ncpus: 1 2021-05-18T14:09:39.7716157Z crayon.enabled: NULL 2021-05-18T14:09:39.7716668Z remove-openmp-macos: true 2021-05-18T14:09:39.7717204Z http-user-agent: default 2021-05-18T14:09:39.7717635Z install-r: true 2021-05-18T14:09:39.7718190Z windows-path-include-mingw: true 2021-05-18T14:09:39.7718681Z env: 2021-05-18T14:09:39.7719092Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:09:39.7719717Z TIC_DEPLOY_KEY: 2021-05-18T14:09:39.7720477Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:09:39.7721716Z GITHUB_PAT: *** 2021-05-18T14:09:39.7722488Z COVERALLS_TOKEN: *** 2021-05-18T14:09:39.7722942Z continue-on-error: true 2021-05-18T14:09:39.7723392Z VDIFFR_RUN_TESTS: 2021-05-18T14:09:39.7723753Z ##[endgroup] 2021-05-18T14:09:40.4702428Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive add-apt-repository -y ppa:cran/travis 2021-05-18T14:09:42.3825099Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-05-18T14:09:42.3827772Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease [114 kB] 2021-05-18T14:09:42.3830737Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease [101 kB] 2021-05-18T14:09:42.4648392Z Hit:4 https://download.mono-project.com/repo/ubuntu stable-focal InRelease 2021-05-18T14:09:42.4858596Z Get:5 http://security.ubuntu.com/ubuntu focal-security InRelease [109 kB] 2021-05-18T14:09:42.5132982Z Get:6 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease [10.5 kB] 2021-05-18T14:09:42.5304496Z Hit:7 http://ppa.launchpad.net/apt-fast/stable/ubuntu focal InRelease 2021-05-18T14:09:42.6030903Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 Packages [983 kB] 2021-05-18T14:09:42.6317675Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main Translation-en [223 kB] 2021-05-18T14:09:42.6338417Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 c-n-f Metadata [13.3 kB] 2021-05-18T14:09:42.6343197Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted amd64 Packages [226 kB] 2021-05-18T14:09:42.6367572Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted Translation-en [33.3 kB] 2021-05-18T14:09:42.6375488Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 Packages [777 kB] 2021-05-18T14:09:42.6477209Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe Translation-en [167 kB] 2021-05-18T14:09:42.6496856Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 c-n-f Metadata [17.5 kB] 2021-05-18T14:09:42.6881138Z Get:16 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease [18.0 kB] 2021-05-18T14:09:42.9318063Z Hit:17 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-05-18T14:09:42.9729571Z Get:18 https://packages.microsoft.com/ubuntu/20.04/prod focal/main amd64 Packages [73.4 kB] 2021-05-18T14:09:43.1383550Z Get:19 http://security.ubuntu.com/ubuntu focal-security/main amd64 Packages [656 kB] 2021-05-18T14:09:43.2025052Z Get:20 http://security.ubuntu.com/ubuntu focal-security/main Translation-en [132 kB] 2021-05-18T14:09:43.2081929Z Get:21 http://security.ubuntu.com/ubuntu focal-security/main amd64 c-n-f Metadata [7508 B] 2021-05-18T14:09:43.2083446Z Get:22 http://security.ubuntu.com/ubuntu focal-security/restricted amd64 Packages [203 kB] 2021-05-18T14:09:43.2090006Z Get:23 http://security.ubuntu.com/ubuntu focal-security/restricted Translation-en [29.7 kB] 2021-05-18T14:09:43.2091794Z Get:24 http://security.ubuntu.com/ubuntu focal-security/universe amd64 Packages [568 kB] 2021-05-18T14:09:43.2229577Z Get:25 http://security.ubuntu.com/ubuntu focal-security/universe Translation-en [85.5 kB] 2021-05-18T14:09:43.2231447Z Get:26 http://security.ubuntu.com/ubuntu focal-security/universe amd64 c-n-f Metadata [11.1 kB] 2021-05-18T14:09:49.6190497Z Fetched 4559 kB in 1s (4123 kB/s) 2021-05-18T14:09:50.4200143Z Reading package lists... 2021-05-18T14:09:50.4437799Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get update -y -qq 2021-05-18T14:09:52.2958501Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get install -y gdebi-core qpdf devscripts 2021-05-18T14:09:52.3599323Z Reading package lists... 2021-05-18T14:09:53.4176501Z Building dependency tree... 2021-05-18T14:09:53.4178762Z Reading state information... 2021-05-18T14:09:53.4180263Z The following additional packages will be installed: 2021-05-18T14:09:53.4182404Z dctrl-tools diffstat dput gettext intltool-debian libapt-pkg-perl 2021-05-18T14:09:53.4184217Z libarchive-zip-perl libarray-intspan-perl libasync-mergepoint-perl 2021-05-18T14:09:53.4186259Z libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl 2021-05-18T14:09:53.4188388Z libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl 2021-05-18T14:09:53.4190289Z libcommon-sense-perl libconst-fast-perl libcontextual-return-perl 2021-05-18T14:09:53.4191929Z libcpanel-json-xs-perl libcroco3 libdata-optlist-perl 2021-05-18T14:09:53.4193675Z libdevel-callchecker-perl libdevel-size-perl libdigest-bubblebabble-perl 2021-05-18T14:09:53.4195609Z libdigest-hmac-perl libdistro-info-perl libdynaloader-functions-perl 2021-05-18T14:09:53.4197261Z libemail-valid-perl libexporter-tiny-perl libfile-chdir-perl 2021-05-18T14:09:53.4198916Z libfile-find-rule-perl libfile-homedir-perl libfile-which-perl 2021-05-18T14:09:53.4201102Z libfont-ttf-perl libfuture-perl libgetopt-long-descriptive-perl 2021-05-18T14:09:53.4202930Z libgit-wrapper-perl libgitlab-api-v4-perl libhash-fieldhash-perl 2021-05-18T14:09:53.4204786Z libhttp-tiny-multipart-perl libimport-into-perl libio-async-loop-epoll-perl 2021-05-18T14:09:53.4206590Z libio-async-perl libio-prompter-perl libio-pty-perl libio-string-perl 2021-05-18T14:09:53.4208240Z libipc-run-perl libjson-maybexs-perl libjson-perl libjson-xs-perl 2021-05-18T14:09:53.4209893Z liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl 2021-05-18T14:09:53.4211496Z liblist-someutils-perl liblist-someutils-xs-perl 2021-05-18T14:09:53.4213298Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-05-18T14:09:53.4215343Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-05-18T14:09:53.4216817Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-05-18T14:09:53.4218125Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-05-18T14:09:53.4219499Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-05-18T14:09:53.4221032Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-05-18T14:09:53.4223087Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-05-18T14:09:53.4224641Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-05-18T14:09:53.4226134Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-05-18T14:09:53.4227663Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-05-18T14:09:53.4229131Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-05-18T14:09:53.4230699Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-05-18T14:09:53.4232290Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-05-18T14:09:53.4233819Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-05-18T14:09:53.4235459Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-05-18T14:09:53.4237058Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-05-18T14:09:53.4238586Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-05-18T14:09:53.4240242Z libtype-tiny-perl libtype-tiny-xs-perl libtypes-serialiser-perl 2021-05-18T14:09:53.4241969Z libunicode-utf8-perl libvariable-magic-perl libwant-perl libxml-writer-perl 2021-05-18T14:09:53.4243404Z libyaml-libyaml-perl licensecheck lintian patchutils python3-gpg 2021-05-18T14:09:53.4246805Z python3-magic python3-unidiff python3-xdg t1utils wdiff 2021-05-18T14:09:53.4247436Z Suggested packages: 2021-05-18T14:09:53.4248276Z debtags adequate autopkgtest bls-standalone bsd-mailx | mailx 2021-05-18T14:09:53.4249394Z check-all-the-things cvs-buildpackage debhelper devscripts-el diffoscope 2021-05-18T14:09:53.4250622Z disorderfs dose-extra duck faketime gnuplot how-can-i-help libdbd-pg-perl 2021-05-18T14:09:53.4251889Z libnet-smtps-perl libterm-size-perl libyaml-syck-perl mozilla-devscripts 2021-05-18T14:09:53.4253070Z mutt piuparts quilt ratt reprotest svn-buildpackage w3m debian-keyring 2021-05-18T14:09:53.4254232Z equivs libsoap-lite-perl python3-paramiko mini-dinstall gettext-doc 2021-05-18T14:09:53.4255404Z autopoint libasprintf-dev libgettextpo-dev libossp-uuid-perl 2021-05-18T14:09:53.4256660Z libscalar-number-perl libbareword-filehandles-perl libindirect-perl 2021-05-18T14:09:53.4258176Z libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl 2021-05-18T14:09:53.4259441Z binutils-multiarch libtext-template-perl wdiff-doc 2021-05-18T14:09:53.4260265Z The following NEW packages will be installed: 2021-05-18T14:09:53.4261244Z dctrl-tools devscripts diffstat dput gdebi-core gettext intltool-debian 2021-05-18T14:09:53.4262360Z libapt-pkg-perl libarchive-zip-perl libarray-intspan-perl 2021-05-18T14:09:53.4263800Z libasync-mergepoint-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl 2021-05-18T14:09:53.4265452Z libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl 2021-05-18T14:09:53.4266774Z libclone-perl libcommon-sense-perl libconst-fast-perl 2021-05-18T14:09:53.4267996Z libcontextual-return-perl libcpanel-json-xs-perl libcroco3 2021-05-18T14:09:53.4269286Z libdata-optlist-perl libdevel-callchecker-perl libdevel-size-perl 2021-05-18T14:09:53.4270729Z libdigest-bubblebabble-perl libdigest-hmac-perl libdistro-info-perl 2021-05-18T14:09:53.4272227Z libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl 2021-05-18T14:09:53.4273586Z libfile-chdir-perl libfile-find-rule-perl libfile-homedir-perl 2021-05-18T14:09:53.4274749Z libfile-which-perl libfont-ttf-perl libfuture-perl 2021-05-18T14:09:53.4276091Z libgetopt-long-descriptive-perl libgit-wrapper-perl libgitlab-api-v4-perl 2021-05-18T14:09:53.4277607Z libhash-fieldhash-perl libhttp-tiny-multipart-perl libimport-into-perl 2021-05-18T14:09:53.4279040Z libio-async-loop-epoll-perl libio-async-perl libio-prompter-perl 2021-05-18T14:09:53.4284541Z libio-pty-perl libio-string-perl libipc-run-perl libjson-maybexs-perl 2021-05-18T14:09:53.4285856Z libjson-perl libjson-xs-perl liblinux-epoll-perl liblist-compare-perl 2021-05-18T14:09:53.4287432Z liblist-moreutils-perl liblist-someutils-perl liblist-someutils-xs-perl 2021-05-18T14:09:53.4289024Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-05-18T14:09:53.4290577Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-05-18T14:09:53.4291913Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-05-18T14:09:53.4293082Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-05-18T14:09:53.4294323Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-05-18T14:09:53.4295702Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-05-18T14:09:53.4297185Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-05-18T14:09:53.4298552Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-05-18T14:09:53.4299824Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-05-18T14:09:53.4301246Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-05-18T14:09:53.4302661Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-05-18T14:09:53.4304107Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-05-18T14:09:53.4305559Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-05-18T14:09:53.4306908Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-05-18T14:09:53.4308420Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-05-18T14:09:53.4309947Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-05-18T14:09:53.4311264Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-05-18T14:09:53.4312604Z libtype-tiny-perl libtype-tiny-xs-perl libtypes-serialiser-perl 2021-05-18T14:09:53.4314007Z libunicode-utf8-perl libvariable-magic-perl libwant-perl libxml-writer-perl 2021-05-18T14:09:53.4315250Z libyaml-libyaml-perl licensecheck lintian patchutils python3-gpg 2021-05-18T14:09:53.4316351Z python3-magic python3-unidiff python3-xdg qpdf t1utils wdiff 2021-05-18T14:09:53.4317112Z 0 upgraded, 130 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:09:53.4317754Z Need to get 8648 kB of archives. 2021-05-18T14:09:53.4318425Z After this operation, 32.3 MB of additional disk space will be used. 2021-05-18T14:09:53.4319694Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dctrl-tools amd64 2.24-3 [61.5 kB] 2021-05-18T14:09:53.4321201Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-which-perl all 1.23-1 [13.8 kB] 2021-05-18T14:09:53.4322784Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-homedir-perl all 1.004-1 [37.3 kB] 2021-05-18T14:09:53.4324253Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-pty-perl amd64 1:1.12-1 [32.4 kB] 2021-05-18T14:09:53.4325793Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libipc-run-perl all 20180523.0-2 [89.7 kB] 2021-05-18T14:09:53.4327462Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-method-modifiers-perl all 2.13-1 [16.2 kB] 2021-05-18T14:09:53.4329171Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-op-check-perl amd64 0.22-1build2 [10.2 kB] 2021-05-18T14:09:53.4330902Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdynaloader-functions-perl all 0.003-1 [11.9 kB] 2021-05-18T14:09:53.4332686Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-callchecker-perl amd64 0.008-1ubuntu1 [14.5 kB] 2021-05-18T14:09:53.4334361Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-classify-perl amd64 0.015-1build2 [21.1 kB] 2021-05-18T14:09:53.4336036Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-runtime-perl all 0.016-1 [16.2 kB] 2021-05-18T14:09:53.4337619Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimport-into-perl all 1.002005-1 [11.0 kB] 2021-05-18T14:09:53.4339221Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librole-tiny-perl all 2.001004-1 [16.5 kB] 2021-05-18T14:09:53.4340747Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstrictures-perl all 2.000006-1 [16.3 kB] 2021-05-18T14:09:53.4342260Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-quote-perl all 2.006006-1 [19.5 kB] 2021-05-18T14:09:53.4343678Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoo-perl all 2.003006-1 [46.3 kB] 2021-05-18T14:09:53.4345081Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 patchutils amd64 0.3.4-2 [71.1 kB] 2021-05-18T14:09:53.4346480Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 wdiff amd64 1.2.2-2build1 [29.8 kB] 2021-05-18T14:09:53.4347667Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 devscripts amd64 2.20.2ubuntu2 [940 kB] 2021-05-18T14:09:53.4349063Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 diffstat amd64 1.63-1 [27.2 kB] 2021-05-18T14:09:53.4350519Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-gpg amd64 1.13.1-7ubuntu2 [165 kB] 2021-05-18T14:09:53.4351795Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dput all 1.0.3ubuntu1 [42.3 kB] 2021-05-18T14:09:53.4353217Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdebi-core all 0.9.5.7+nmu3 [116 kB] 2021-05-18T14:09:53.4354629Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB] 2021-05-18T14:09:53.4356024Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gettext amd64 0.19.8.1-10build1 [895 kB] 2021-05-18T14:09:53.4357509Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] 2021-05-18T14:09:53.4358954Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libapt-pkg-perl amd64 0.1.36build3 [68.5 kB] 2021-05-18T14:09:53.4360606Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-zip-perl all 1.67-2 [90.5 kB] 2021-05-18T14:09:53.4362170Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarray-intspan-perl all 2.003-1 [23.3 kB] 2021-05-18T14:09:53.4363741Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasync-mergepoint-perl all 0.04-2 [10.2 kB] 2021-05-18T14:09:53.4365504Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-implementation-perl all 0.09-1 [12.2 kB] 2021-05-18T14:09:53.4367355Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [6784 B] 2021-05-18T14:09:53.4369087Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvariable-magic-perl amd64 0.62-1build2 [34.4 kB] 2021-05-18T14:09:53.4370764Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-endofscope-perl all 0.24-1 [16.8 kB] 2021-05-18T14:09:53.4372432Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcapture-tiny-perl all 0.48-1 [20.4 kB] 2021-05-18T14:09:53.4374216Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-xsaccessor-perl amd64 1.19-3build3 [33.6 kB] 2021-05-18T14:09:53.4375799Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclone-perl amd64 0.43-2 [11.0 kB] 2021-05-18T14:09:53.4377291Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcommon-sense-perl amd64 3.74-2build6 [20.1 kB] 2021-05-18T14:09:53.4378892Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-util-perl amd64 1.07-3build5 [19.7 kB] 2021-05-18T14:09:53.4380442Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-install-perl all 0.928-1 [10.5 kB] 2021-05-18T14:09:53.4381979Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdata-optlist-perl all 0.110-1 [9956 B] 2021-05-18T14:09:53.4383567Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-perl all 0.987-1 [44.9 kB] 2021-05-18T14:09:53.4385153Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libconst-fast-perl all 0.014-1 [7958 B] 2021-05-18T14:09:53.4386654Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwant-perl amd64 0.29-1build4 [24.2 kB] 2021-05-18T14:09:53.4388253Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcontextual-return-perl all 0.004014-2 [53.1 kB] 2021-05-18T14:09:53.4389874Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcpanel-json-xs-perl amd64 4.19-1build1 [109 kB] 2021-05-18T14:09:53.4391565Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-bubblebabble-perl all 0.02-2 [7908 B] 2021-05-18T14:09:53.4393223Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.3 kB] 2021-05-18T14:09:53.4394742Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdistro-info-perl all 0.23ubuntu1 [4668 B] 2021-05-18T14:09:53.4396266Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-ip-perl all 1.26-2 [27.4 kB] 2021-05-18T14:09:53.4397719Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-perl all 1.22-1 [336 kB] 2021-05-18T14:09:53.4399271Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-domain-tld-perl all 1.75-1 [29.1 kB] 2021-05-18T14:09:53.4400960Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libemail-valid-perl all 1.202-1 [16.3 kB] 2021-05-18T14:09:53.4402554Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libexporter-tiny-perl all 1.002001-1 [35.5 kB] 2021-05-18T14:09:53.4404057Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-chdir-perl all 0.1008-1 [11.7 kB] 2021-05-18T14:09:53.4405614Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-compare-perl all 0.03-1 [7318 B] 2021-05-18T14:09:53.4407163Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-glob-perl all 0.10-1 [7554 B] 2021-05-18T14:09:53.4408662Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-find-rule-perl all 0.34-1 [28.3 kB] 2021-05-18T14:09:53.4410229Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-string-perl all 1.08-3 [11.1 kB] 2021-05-18T14:09:53.4411707Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfont-ttf-perl all 1.06-1 [313 kB] 2021-05-18T14:09:53.4413143Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfuture-perl all 0.43-1 [77.8 kB] 2021-05-18T14:09:53.4414704Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-validate-perl amd64 1.29-3 [52.7 kB] 2021-05-18T14:09:53.4416440Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgetopt-long-descriptive-perl all 0.104-1 [24.6 kB] 2021-05-18T14:09:53.4418123Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-versions-perl all 1.62-1 [9294 B] 2021-05-18T14:09:53.4419677Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgit-wrapper-perl all 0.048-1 [29.9 kB] 2021-05-18T14:09:53.4421266Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhttp-tiny-multipart-perl all 0.08-1 [8488 B] 2021-05-18T14:09:53.4422960Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-prompter-perl all 0.004015-1 [58.1 kB] 2021-05-18T14:09:53.4424459Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-perl all 4.02000-2 [80.9 kB] 2021-05-18T14:09:53.4425873Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-perl all 1.708-1 [67.8 kB] 2021-05-18T14:09:53.4427512Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-adapter-screen-perl all 0.140-1 [12.1 kB] 2021-05-18T14:09:53.4429219Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-perl all 0.38-1 [19.1 kB] 2021-05-18T14:09:53.4430764Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-identify-perl amd64 0.14-1build2 [10.7 kB] 2021-05-18T14:09:53.4432313Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-name-perl amd64 0.26-1 [11.5 kB] 2021-05-18T14:09:53.4434004Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnamespace-clean-perl all 0.27-1 [13.6 kB] 2021-05-18T14:09:53.4435535Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-tiny-perl all 0.108-1 [42.6 kB] 2021-05-18T14:09:53.4437037Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-perl all 1.008001-2 [304 kB] 2021-05-18T14:09:53.4438584Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgitlab-api-v4-perl all 0.25-1 [83.8 kB] 2021-05-18T14:09:53.4440259Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhash-fieldhash-perl amd64 0.15-1build2 [16.9 kB] 2021-05-18T14:09:53.4441874Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstruct-dumb-perl all 0.09-1 [10.5 kB] 2021-05-18T14:09:53.4443423Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-perl all 0.75-1 [254 kB] 2021-05-18T14:09:53.4444892Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.0 kB] 2021-05-18T14:09:53.4446602Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-loop-epoll-perl all 0.20-1 [10.4 kB] 2021-05-18T14:09:53.4448328Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtypes-serialiser-perl all 1.0-1 [12.1 kB] 2021-05-18T14:09:53.4449890Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-xs-perl amd64 4.020-1build1 [83.7 kB] 2021-05-18T14:09:53.4451443Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-maybexs-perl all 1.004000-1 [11.0 kB] 2021-05-18T14:09:53.4452985Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-compare-perl all 0.53-1 [65.6 kB] 2021-05-18T14:09:53.4454553Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-moreutils-perl amd64 0.416-1build5 [55.5 kB] 2021-05-18T14:09:53.4456218Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-perl all 0.58-1 [29.7 kB] 2021-05-18T14:09:53.4457870Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-xs-perl amd64 0.58-2 [32.5 kB] 2021-05-18T14:09:53.4459436Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-aliases-perl all 0.001006-1 [7176 B] 2021-05-18T14:09:53.4460990Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libobject-id-perl all 0.1.2-2ubuntu1 [15.9 kB] 2021-05-18T14:09:53.4462528Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-struct-perl all 0.017-1 [23.4 kB] 2021-05-18T14:09:53.4464047Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-sec-perl amd64 1.15-1 [44.6 kB] 2021-05-18T14:09:53.4465623Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-libidn-perl amd64 0.12.ds-3build2 [17.3 kB] 2021-05-18T14:09:53.4467156Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-range-perl all 0.12-1 [8556 B] 2021-05-18T14:09:53.4468799Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-xs-perl amd64 0.29-1build1 [18.4 kB] 2021-05-18T14:09:53.4470518Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-iterator-rule-perl all 1.014-1 [49.5 kB] 2021-05-18T14:09:53.4472139Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperl4-corelibs-perl all 0.004-2 [37.4 kB] 2021-05-18T14:09:53.4473766Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperlio-gzip-perl amd64 0.19-1build5 [14.6 kB] 2021-05-18T14:09:53.4475352Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpod-constants-perl all 0.19-1 [16.0 kB] 2021-05-18T14:09:53.4476807Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqpdf26 amd64 9.1.1-1build1 [421 kB] 2021-05-18T14:09:53.4478341Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libre-engine-re2-perl amd64 0.13-5 [16.2 kB] 2021-05-18T14:09:53.4480105Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libreadonly-perl all 2.050-2 [19.9 kB] 2021-05-18T14:09:53.4481554Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-perl all 0.204-1 [15.0 kB] 2021-05-18T14:09:53.4483105Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-xs-perl amd64 0.117-1build2 [12.0 kB] 2021-05-18T14:09:53.4484838Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-license-perl all 3.2.0-1 [36.2 kB] 2021-05-18T14:09:53.4486520Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-perl all 0.2.12-1 [17.1 kB] 2021-05-18T14:09:53.4488220Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-decoder-perl amd64 4.011+ds-1build1 [102 kB] 2021-05-18T14:09:53.4489928Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-encoder-perl amd64 4.011+ds-1build1 [104 kB] 2021-05-18T14:09:53.4491446Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-perl all 4.011-1 [8604 B] 2021-05-18T14:09:53.4492964Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-key-perl amd64 1.33-2build2 [35.4 kB] 2021-05-18T14:09:53.4494678Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-copyright-perl all 0.003006-1 [9608 B] 2021-05-18T14:09:53.4496283Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-escape-perl all 2010.002-2 [17.6 kB] 2021-05-18T14:09:53.4497917Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-shellquote-perl all 1.04-1 [12.0 kB] 2021-05-18T14:09:53.4499584Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libterm-readkey-perl amd64 2.38-1build1 [24.6 kB] 2021-05-18T14:09:53.4501101Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-fatal-perl all 0.014-1 [11.1 kB] 2021-05-18T14:09:53.4502702Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-refcount-perl all 0.10-1 [11.4 kB] 2021-05-18T14:09:53.4504323Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-levenshtein-perl all 0.13-1 [9612 B] 2021-05-18T14:09:53.4505888Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-xs-perl amd64 0.016-1 [22.9 kB] 2021-05-18T14:09:53.4507496Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libunicode-utf8-perl amd64 0.62-1build1 [18.1 kB] 2021-05-18T14:09:53.4509070Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxml-writer-perl all 0.625-1 [24.9 kB] 2021-05-18T14:09:53.4510629Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [28.5 kB] 2021-05-18T14:09:53.4512137Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 licensecheck all 3.0.45-1 [23.9 kB] 2021-05-18T14:09:53.4513645Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-size-perl amd64 0.83-1build1 [20.0 kB] 2021-05-18T14:09:53.4515041Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 t1utils amd64 1.41-3 [56.1 kB] 2021-05-18T14:09:53.4516196Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 lintian all 2.62.0 [980 kB] 2021-05-18T14:09:53.4517582Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-unidiff all 0.5.5-2 [9180 B] 2021-05-18T14:09:53.4519031Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-xdg all 0.26-1ubuntu1 [36.1 kB] 2021-05-18T14:09:53.4520586Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qpdf amd64 9.1.1-1build1 [476 kB] 2021-05-18T14:09:53.4521986Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-magic all 2:0.4.15-3 [9376 B] 2021-05-18T14:09:54.0157667Z Fetched 8648 kB in 0s (62.8 MB/s) 2021-05-18T14:09:54.0522350Z Selecting previously unselected package dctrl-tools. 2021-05-18T14:09:54.0742701Z (Reading database ... 2021-05-18T14:09:54.0743717Z (Reading database ... 5% 2021-05-18T14:09:54.0744356Z (Reading database ... 10% 2021-05-18T14:09:54.0745348Z (Reading database ... 15% 2021-05-18T14:09:54.0746142Z (Reading database ... 20% 2021-05-18T14:09:54.0746758Z (Reading database ... 25% 2021-05-18T14:09:54.0747594Z (Reading database ... 30% 2021-05-18T14:09:54.0748284Z (Reading database ... 35% 2021-05-18T14:09:54.0748891Z (Reading database ... 40% 2021-05-18T14:09:54.0749581Z (Reading database ... 45% 2021-05-18T14:09:54.0750267Z (Reading database ... 50% 2021-05-18T14:09:54.1034898Z (Reading database ... 55% 2021-05-18T14:09:54.1550658Z (Reading database ... 60% 2021-05-18T14:09:54.1988393Z (Reading database ... 65% 2021-05-18T14:09:54.2374055Z (Reading database ... 70% 2021-05-18T14:09:54.3169751Z (Reading database ... 75% 2021-05-18T14:09:54.4011487Z (Reading database ... 80% 2021-05-18T14:09:54.4888304Z (Reading database ... 85% 2021-05-18T14:09:54.5565661Z (Reading database ... 90% 2021-05-18T14:09:54.6177646Z (Reading database ... 95% 2021-05-18T14:09:54.6178172Z (Reading database ... 100% 2021-05-18T14:09:54.6178811Z (Reading database ... 254809 files and directories currently installed.) 2021-05-18T14:09:54.6304158Z Preparing to unpack .../000-dctrl-tools_2.24-3_amd64.deb ... 2021-05-18T14:09:54.6403070Z Unpacking dctrl-tools (2.24-3) ... 2021-05-18T14:09:54.6673610Z Selecting previously unselected package libfile-which-perl. 2021-05-18T14:09:54.6940670Z Preparing to unpack .../001-libfile-which-perl_1.23-1_all.deb ... 2021-05-18T14:09:54.6954184Z Unpacking libfile-which-perl (1.23-1) ... 2021-05-18T14:09:54.7188760Z Selecting previously unselected package libfile-homedir-perl. 2021-05-18T14:09:54.7470386Z Preparing to unpack .../002-libfile-homedir-perl_1.004-1_all.deb 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2021-05-18T14:09:54.9612287Z Preparing to unpack .../006-libb-hooks-op-check-perl_0.22-1build2_amd64.deb ... 2021-05-18T14:09:54.9623441Z Unpacking libb-hooks-op-check-perl (0.22-1build2) ... 2021-05-18T14:09:54.9834882Z Selecting previously unselected package libdynaloader-functions-perl. 2021-05-18T14:09:55.0102070Z Preparing to unpack .../007-libdynaloader-functions-perl_0.003-1_all.deb ... 2021-05-18T14:09:55.0114311Z Unpacking libdynaloader-functions-perl (0.003-1) ... 2021-05-18T14:09:55.0339262Z Selecting previously unselected package libdevel-callchecker-perl. 2021-05-18T14:09:55.0605161Z Preparing to unpack .../008-libdevel-callchecker-perl_0.008-1ubuntu1_amd64.deb ... 2021-05-18T14:09:55.0615564Z Unpacking libdevel-callchecker-perl (0.008-1ubuntu1) ... 2021-05-18T14:09:55.0882373Z Selecting previously unselected package libparams-classify-perl. 2021-05-18T14:09:55.1104318Z Preparing to unpack .../009-libparams-classify-perl_0.015-1build2_amd64.deb ... 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2021-05-18T14:10:24.7949035Z [command]sudo apt-get install -y texinfo 2021-05-18T14:10:24.9614733Z Reading package lists... 2021-05-18T14:10:25.1431191Z Building dependency tree... 2021-05-18T14:10:25.1441294Z Reading state information... 2021-05-18T14:10:25.3663178Z texinfo is already the newest version (6.7.0.dfsg.2-5). 2021-05-18T14:10:25.3664466Z 0 upgraded, 0 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:10:25.6124684Z [command]sh /home/runner/work/_temp/install-unx.sh 2021-05-18T14:10:25.6268058Z --2021-05-18 14:10:25-- https://yihui.org/tinytex/TinyTeX-1.tar.gz 2021-05-18T14:10:25.6369522Z Resolving yihui.org (yihui.org)... 76.223.126.88 2021-05-18T14:10:25.6424976Z Connecting to yihui.org (yihui.org)|76.223.126.88|:443... connected. 2021-05-18T14:10:25.6965059Z HTTP request sent, awaiting response... 301 Moved Permanently 2021-05-18T14:10:25.6969210Z Location: https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu [following] 2021-05-18T14:10:25.6971736Z --2021-05-18 14:10:25-- https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu 2021-05-18T14:10:25.7322226Z Resolving ci.appveyor.com (ci.appveyor.com)... 138.91.141.243 2021-05-18T14:10:25.7918023Z Connecting to ci.appveyor.com (ci.appveyor.com)|138.91.141.243|:443... connected. 2021-05-18T14:10:26.0385774Z HTTP request sent, awaiting response... 302 Found 2021-05-18T14:10:26.0389546Z Location: https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1550/guvetqs88lxl2mv0/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=%2F2kiqM0fhtTs374TISjfiWR7%2BDtGpH7CmT%2ByVVJfn4A%3D&st=2021-05-18T14%3A09%3A25Z&se=2021-05-18T14%3A15%3A25Z&sp=r [following] 2021-05-18T14:10:26.0393568Z --2021-05-18 14:10:26-- https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1550/guvetqs88lxl2mv0/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=%2F2kiqM0fhtTs374TISjfiWR7%2BDtGpH7CmT%2ByVVJfn4A%3D&st=2021-05-18T14%3A09%3A25Z&se=2021-05-18T14%3A15%3A25Z&sp=r 2021-05-18T14:10:26.0827647Z Resolving appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)... 52.239.228.196 2021-05-18T14:10:26.1459713Z Connecting to appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)|52.239.228.196|:443... connected. 2021-05-18T14:10:26.4316292Z HTTP request sent, awaiting response... 200 OK 2021-05-18T14:10:26.4320102Z Length: 67306919 (64M) [application/octet-stream] 2021-05-18T14:10:26.4322090Z Saving to: ‘TinyTeX.tar.gz’ 2021-05-18T14:10:26.9989551Z 2021-05-18T14:10:28.7474450Z 0K ........ ........ ........ ........ 49% 14.4M 2s 2021-05-18T14:10:29.9668009Z 32768K ........ ........ ........ ........ 99% 25.7M 0s 2021-05-18T14:10:29.9670077Z 65536K 100% 2.92M=3.5s 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2021-05-18T14:10:32.1733880Z COVERALLS_TOKEN: *** 2021-05-18T14:10:32.1734419Z continue-on-error: true 2021-05-18T14:10:32.1734922Z VDIFFR_RUN_TESTS: 2021-05-18T14:10:32.1735550Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:10:32.1736074Z TZ: UTC 2021-05-18T14:10:32.1736494Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:10:32.1737055Z NOT_CRAN: true 2021-05-18T14:10:32.1737527Z ##[endgroup] 2021-05-18T14:10:35.2399354Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-05-18T14:10:35.4368642Z [1/1, ??:??/??:??] update: texlive.infra [226k] (59199 -> 59237) ... done 2021-05-18T14:10:35.4369722Z running mktexlsr ... 2021-05-18T14:10:35.5127319Z done running mktexlsr. 2021-05-18T14:10:35.5372695Z tlmgr: package log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr.log 2021-05-18T14:10:35.5374422Z tlmgr: command log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr-commands.log 2021-05-18T14:10:36.7673433Z tlmgr: package 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updmap-sys ... 2021-05-18T14:10:43.1660979Z done running updmap-sys. 2021-05-18T14:10:43.1662161Z regenerating fmtutil.cnf in /home/runner/.TinyTeX/texmf-dist 2021-05-18T14:10:43.1663834Z running fmtutil-sys --byfmt optex --no-error-if-no-engine=luajithbtex,luajittex,mfluajit --status-file=/tmp/T62iWARI7h/4qPsC0Gyyq ... 2021-05-18T14:10:43.5086443Z done running fmtutil-sys --byfmt optex --no-error-if-no-engine=luajithbtex,luajittex,mfluajit --status-file=/tmp/T62iWARI7h/4qPsC0Gyyq. 2021-05-18T14:10:43.5088134Z OK: optex.fmt/luatex 2021-05-18T14:10:43.5089384Z tlmgr: package log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr.log 2021-05-18T14:10:43.5090875Z tlmgr: command log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr-commands.log 2021-05-18T14:10:44.6821045Z /home/runner/.TinyTeX/bin/x86_64-linux/tlmgr: (make_container __BACKUP_texlive-scripts.r59219.tar) install-tl does not exist 2021-05-18T14:10:44.6823126Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-05-18T14:10:44.8377413Z [1/1, ??:??/??:??] update: texlive-scripts [106k] (59219 -> 59236) ... done 2021-05-18T14:10:44.8378092Z running mktexlsr ... 2021-05-18T14:10:44.9138582Z done running mktexlsr. 2021-05-18T14:10:44.9413526Z running updmap-sys ... 2021-05-18T14:10:45.1878370Z done running updmap-sys. 2021-05-18T14:10:45.1880354Z tlmgr: package log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr.log 2021-05-18T14:10:45.1881722Z tlmgr: command log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr-commands.log 2021-05-18T14:10:45.2725972Z ##[group]Run r-lib/actions/setup-pandoc@master 2021-05-18T14:10:45.2726461Z with: 2021-05-18T14:10:45.2726849Z pandoc-version: 2.7.3 2021-05-18T14:10:45.2727215Z env: 2021-05-18T14:10:45.2727624Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:10:45.2728060Z TIC_DEPLOY_KEY: 2021-05-18T14:10:45.2728829Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:10:45.2730576Z GITHUB_PAT: *** 2021-05-18T14:10:45.2731345Z COVERALLS_TOKEN: *** 2021-05-18T14:10:45.2731798Z continue-on-error: true 2021-05-18T14:10:45.2732248Z VDIFFR_RUN_TESTS: 2021-05-18T14:10:45.2732699Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:10:45.2733129Z TZ: UTC 2021-05-18T14:10:45.2733504Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:10:45.2733884Z NOT_CRAN: true 2021-05-18T14:10:45.2734238Z ##[endgroup] 2021-05-18T14:10:45.6583581Z [command]sudo apt-get install -y gdebi-core 2021-05-18T14:10:45.7224417Z Reading package lists... 2021-05-18T14:10:45.9024230Z Building dependency tree... 2021-05-18T14:10:45.9039931Z Reading state information... 2021-05-18T14:10:46.1362959Z gdebi-core is already the newest version (0.9.5.7+nmu3). 2021-05-18T14:10:46.1364150Z 0 upgraded, 0 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:10:46.1401150Z [command]sudo gdebi --non-interactive /home/runner/work/_temp/pandoc-2.7.3-1-amd64.deb 2021-05-18T14:10:46.2500916Z 2021-05-18T14:10:46.2657688Z Reading package lists... 0% 2021-05-18T14:10:46.2658507Z 2021-05-18T14:10:46.2700452Z Reading package lists... 100% 2021-05-18T14:10:46.2701065Z 2021-05-18T14:10:46.2701454Z 2021-05-18T14:10:46.2702051Z Reading package lists... 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2021-05-18T14:10:46.7701880Z 2021-05-18T14:10:46.7702401Z Reading state information... 87% 2021-05-18T14:10:46.7738636Z 2021-05-18T14:10:46.7739147Z Reading state information... 89% 2021-05-18T14:10:46.7773623Z 2021-05-18T14:10:46.7774144Z Reading state information... 91% 2021-05-18T14:10:46.7811570Z 2021-05-18T14:10:46.7812070Z Reading state information... 93% 2021-05-18T14:10:46.7849056Z 2021-05-18T14:10:46.7849569Z Reading state information... 95% 2021-05-18T14:10:46.7889102Z 2021-05-18T14:10:46.7889631Z Reading state information... 97% 2021-05-18T14:10:46.7926748Z 2021-05-18T14:10:46.7927291Z Reading state information... 99% 2021-05-18T14:10:47.0679775Z Selecting previously unselected package pandoc. 2021-05-18T14:10:47.1961194Z (Reading database ... 261973 files and directories currently installed.) 2021-05-18T14:10:47.2088991Z Preparing to unpack .../_temp/pandoc-2.7.3-1-amd64.deb ... 2021-05-18T14:10:47.2099308Z Unpacking pandoc (2.7.3-1) ... 2021-05-18T14:10:49.1244625Z Setting up pandoc (2.7.3-1) ... 2021-05-18T14:10:49.1275708Z Processing triggers for man-db (2.9.1-1) ... 2021-05-18T14:10:49.8659221Z 2021-05-18T14:10:49.8660200Z 2021-05-18T14:10:49.8660975Z Reading state information... Done 2021-05-18T14:10:49.9001388Z ##[group]Run git config user.name adigherman 2021-05-18T14:10:49.9002046Z git config user.name adigherman 2021-05-18T14:10:49.9002609Z git config user.email adig@jhu.edu 2021-05-18T14:10:49.9043389Z shell: /usr/bin/bash -e {0} 2021-05-18T14:10:49.9043799Z env: 2021-05-18T14:10:49.9044243Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:10:49.9044722Z TIC_DEPLOY_KEY: 2021-05-18T14:10:49.9045503Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:10:49.9047091Z GITHUB_PAT: *** 2021-05-18T14:10:49.9047990Z COVERALLS_TOKEN: *** 2021-05-18T14:10:49.9048475Z continue-on-error: true 2021-05-18T14:10:49.9048954Z VDIFFR_RUN_TESTS: 2021-05-18T14:10:49.9049758Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:10:49.9050242Z TZ: UTC 2021-05-18T14:10:49.9050643Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:10:49.9051056Z NOT_CRAN: true 2021-05-18T14:10:49.9051450Z ##[endgroup] 2021-05-18T14:10:49.9323949Z ##[group]Run adigherman/actions/install-sysdeps-linux@master 2021-05-18T14:10:49.9324542Z env: 2021-05-18T14:10:49.9324990Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:10:49.9325443Z TIC_DEPLOY_KEY: 2021-05-18T14:10:49.9326204Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:10:49.9327855Z GITHUB_PAT: *** 2021-05-18T14:10:49.9328631Z COVERALLS_TOKEN: *** 2021-05-18T14:10:49.9329086Z continue-on-error: true 2021-05-18T14:10:49.9329539Z VDIFFR_RUN_TESTS: 2021-05-18T14:10:49.9329989Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:10:49.9330422Z TZ: UTC 2021-05-18T14:10:49.9330797Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:10:49.9331179Z NOT_CRAN: true 2021-05-18T14:10:49.9331534Z ##[endgroup] 2021-05-18T14:10:50.1162161Z Reading package lists... 2021-05-18T14:10:50.2948102Z Building dependency tree... 2021-05-18T14:10:50.2964885Z Reading state information... 2021-05-18T14:10:50.4365712Z The following additional packages will be installed: 2021-05-18T14:10:50.4370235Z cmake-data libjsoncpp1 librhash0 2021-05-18T14:10:50.4375763Z Suggested packages: 2021-05-18T14:10:50.4376536Z cmake-doc ninja-build 2021-05-18T14:10:50.4813430Z The following NEW packages will be installed: 2021-05-18T14:10:50.4823002Z cmake cmake-data libjsoncpp1 librhash0 2021-05-18T14:10:50.5022808Z 0 upgraded, 4 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:10:50.5023566Z Need to get 5470 kB of archives. 2021-05-18T14:10:50.5024282Z After this operation, 28.3 MB of additional disk space will be used. 2021-05-18T14:10:50.5026081Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake-data all 3.16.3-1ubuntu1 [1612 kB] 2021-05-18T14:10:50.5318945Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjsoncpp1 amd64 1.7.4-3.1ubuntu2 [75.6 kB] 2021-05-18T14:10:50.5337060Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librhash0 amd64 1.3.9-1 [113 kB] 2021-05-18T14:10:50.5365967Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake amd64 3.16.3-1ubuntu1 [3669 kB] 2021-05-18T14:10:50.9979356Z Fetched 5470 kB in 0s (48.7 MB/s) 2021-05-18T14:10:51.0393730Z Selecting previously unselected package cmake-data. 2021-05-18T14:10:51.0469630Z (Reading database ... 2021-05-18T14:10:51.0470201Z (Reading database ... 5% 2021-05-18T14:10:51.0470680Z (Reading database ... 10% 2021-05-18T14:10:51.0471140Z (Reading database ... 15% 2021-05-18T14:10:51.0471609Z (Reading database ... 20% 2021-05-18T14:10:51.0472080Z (Reading database ... 25% 2021-05-18T14:10:51.0472532Z (Reading database ... 30% 2021-05-18T14:10:51.0472996Z (Reading database ... 35% 2021-05-18T14:10:51.0473452Z (Reading database ... 40% 2021-05-18T14:10:51.0473915Z (Reading database ... 45% 2021-05-18T14:10:51.0474599Z (Reading database ... 50% 2021-05-18T14:10:51.0504616Z (Reading database ... 55% 2021-05-18T14:10:51.0545699Z (Reading database ... 60% 2021-05-18T14:10:51.0587480Z (Reading database ... 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librhash0:amd64. 2021-05-18T14:10:51.7840691Z Preparing to unpack .../librhash0_1.3.9-1_amd64.deb ... 2021-05-18T14:10:51.7853020Z Unpacking librhash0:amd64 (1.3.9-1) ... 2021-05-18T14:10:51.8241323Z Selecting previously unselected package cmake. 2021-05-18T14:10:51.8448970Z Preparing to unpack .../cmake_3.16.3-1ubuntu1_amd64.deb ... 2021-05-18T14:10:51.8459347Z Unpacking cmake (3.16.3-1ubuntu1) ... 2021-05-18T14:10:52.2423837Z Setting up librhash0:amd64 (1.3.9-1) ... 2021-05-18T14:10:52.2449312Z Setting up cmake-data (3.16.3-1ubuntu1) ... 2021-05-18T14:10:52.2828363Z Setting up libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-05-18T14:10:52.2850179Z Setting up cmake (3.16.3-1ubuntu1) ... 2021-05-18T14:10:52.2876860Z Processing triggers for man-db (2.9.1-1) ... 2021-05-18T14:10:53.3591916Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:10:55.5486592Z Reading package lists... 2021-05-18T14:10:55.7239140Z Building dependency tree... 2021-05-18T14:10:55.7258029Z Reading state information... 2021-05-18T14:10:55.8808687Z Suggested packages: 2021-05-18T14:10:55.8810625Z libssh-doc 2021-05-18T14:10:55.9269559Z The following NEW packages will be installed: 2021-05-18T14:10:55.9272733Z libssh-dev 2021-05-18T14:10:55.9453133Z 0 upgraded, 1 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:10:55.9453871Z Need to get 219 kB of archives. 2021-05-18T14:10:55.9454939Z After this operation, 1127 kB of additional disk space will be used. 2021-05-18T14:10:55.9456991Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-dev amd64 0.9.3-2ubuntu2.1 [219 kB] 2021-05-18T14:10:56.3388862Z Fetched 219 kB in 0s (12.4 MB/s) 2021-05-18T14:10:56.3686107Z Selecting previously unselected package libssh-dev:amd64. 2021-05-18T14:10:56.3745880Z (Reading database ... 2021-05-18T14:10:56.3746728Z (Reading database ... 5% 2021-05-18T14:10:56.3747438Z (Reading database ... 10% 2021-05-18T14:10:56.3748074Z (Reading database ... 15% 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and directories currently installed.) 2021-05-18T14:10:56.5118321Z Preparing to unpack .../libssh-dev_0.9.3-2ubuntu2.1_amd64.deb ... 2021-05-18T14:10:56.5126711Z Unpacking libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-05-18T14:10:56.5924229Z Setting up libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-05-18T14:10:58.7840417Z Reading package lists... 2021-05-18T14:10:58.9626954Z Building dependency tree... 2021-05-18T14:10:58.9645286Z Reading state information... 2021-05-18T14:10:59.1691593Z The following NEW packages will be installed: 2021-05-18T14:10:59.1699469Z jags 2021-05-18T14:10:59.1885334Z 0 upgraded, 1 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:10:59.1886381Z Need to get 1562 kB of archives. 2021-05-18T14:10:59.1887241Z After this operation, 3615 kB of additional disk space will be used. 2021-05-18T14:10:59.1889656Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 jags amd64 4.3.0-3build1 [1562 kB] 2021-05-18T14:10:59.5933351Z Fetched 1562 kB in 0s (50.1 MB/s) 2021-05-18T14:10:59.6233360Z Selecting previously unselected package jags. 2021-05-18T14:10:59.6305956Z (Reading database ... 2021-05-18T14:10:59.6306888Z (Reading database ... 5% 2021-05-18T14:10:59.6307563Z (Reading database ... 10% 2021-05-18T14:10:59.6308197Z (Reading database ... 15% 2021-05-18T14:10:59.6308829Z (Reading database ... 20% 2021-05-18T14:10:59.6309436Z (Reading database ... 25% 2021-05-18T14:10:59.6310092Z (Reading database ... 30% 2021-05-18T14:10:59.6310709Z (Reading database ... 35% 2021-05-18T14:10:59.6311311Z (Reading database ... 40% 2021-05-18T14:10:59.6311923Z (Reading database ... 45% 2021-05-18T14:10:59.6312523Z (Reading database ... 50% 2021-05-18T14:10:59.6344724Z (Reading database ... 55% 2021-05-18T14:10:59.6382691Z (Reading database ... 60% 2021-05-18T14:10:59.6423420Z (Reading database ... 65% 2021-05-18T14:10:59.6560226Z (Reading database ... 70% 2021-05-18T14:10:59.6584371Z (Reading database ... 75% 2021-05-18T14:10:59.6986033Z (Reading database ... 80% 2021-05-18T14:10:59.7328089Z (Reading database ... 85% 2021-05-18T14:10:59.7489009Z (Reading database ... 90% 2021-05-18T14:10:59.7574218Z (Reading database ... 95% 2021-05-18T14:10:59.7577201Z (Reading database ... 100% 2021-05-18T14:10:59.7578048Z (Reading database ... 264783 files and directories currently installed.) 2021-05-18T14:10:59.7703690Z Preparing to unpack .../jags_4.3.0-3build1_amd64.deb ... 2021-05-18T14:10:59.7722530Z Unpacking jags (4.3.0-3build1) ... 2021-05-18T14:10:59.9223392Z Setting up jags (4.3.0-3build1) ... 2021-05-18T14:10:59.9332199Z Processing triggers for man-db (2.9.1-1) ... 2021-05-18T14:11:00.6434680Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:11:02.7899143Z Reading package lists... 2021-05-18T14:11:02.9637965Z Building dependency tree... 2021-05-18T14:11:02.9657129Z Reading state information... 2021-05-18T14:11:03.1240301Z The following additional packages will be installed: 2021-05-18T14:11:03.1241796Z libnode64 libuv1-dev 2021-05-18T14:11:03.1722665Z The following NEW packages will be installed: 2021-05-18T14:11:03.1729878Z libnode-dev libnode64 libuv1-dev 2021-05-18T14:11:03.1906703Z 0 upgraded, 3 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:11:03.1907530Z Need to get 6239 kB of archives. 2021-05-18T14:11:03.1908672Z After this operation, 24.9 MB of additional disk space will be used. 2021-05-18T14:11:03.1911188Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libuv1-dev amd64 1.34.2-1ubuntu1.1 [103 kB] 2021-05-18T14:11:03.1942810Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode64 amd64 10.19.0~dfsg-3ubuntu1 [5765 kB] 2021-05-18T14:11:03.3369463Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode-dev amd64 10.19.0~dfsg-3ubuntu1 [370 kB] 2021-05-18T14:11:03.7335964Z Fetched 6239 kB in 0s (37.3 MB/s) 2021-05-18T14:11:03.7682255Z Selecting previously unselected package libuv1-dev:amd64. 2021-05-18T14:11:03.7685858Z (Reading database ... 2021-05-18T14:11:03.7686530Z (Reading database ... 5% 2021-05-18T14:11:03.7687013Z (Reading database ... 10% 2021-05-18T14:11:03.7687487Z (Reading database ... 15% 2021-05-18T14:11:03.7687974Z (Reading database ... 20% 2021-05-18T14:11:03.7688429Z (Reading database ... 25% 2021-05-18T14:11:03.7688902Z (Reading database ... 30% 2021-05-18T14:11:03.7689356Z (Reading database ... 35% 2021-05-18T14:11:03.7689821Z (Reading database ... 40% 2021-05-18T14:11:03.7690288Z (Reading database ... 45% 2021-05-18T14:11:03.7690751Z (Reading database ... 50% 2021-05-18T14:11:03.7725167Z (Reading database ... 55% 2021-05-18T14:11:03.7761580Z (Reading database ... 60% 2021-05-18T14:11:03.7800963Z (Reading database ... 65% 2021-05-18T14:11:03.7926831Z (Reading database ... 70% 2021-05-18T14:11:03.7949683Z (Reading database ... 75% 2021-05-18T14:11:03.8329323Z (Reading database ... 80% 2021-05-18T14:11:03.8764012Z (Reading database ... 85% 2021-05-18T14:11:03.8917643Z (Reading database ... 90% 2021-05-18T14:11:03.8999900Z (Reading database ... 95% 2021-05-18T14:11:03.9000535Z (Reading database ... 100% 2021-05-18T14:11:03.9001360Z (Reading database ... 264923 files and directories currently installed.) 2021-05-18T14:11:03.9124577Z Preparing to unpack .../libuv1-dev_1.34.2-1ubuntu1.1_amd64.deb ... 2021-05-18T14:11:03.9133874Z Unpacking libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-05-18T14:11:03.9521475Z Selecting previously unselected package libnode64:amd64. 2021-05-18T14:11:03.9748429Z Preparing to unpack .../libnode64_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-05-18T14:11:03.9771835Z Unpacking libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-18T14:11:04.5922541Z Selecting previously unselected package libnode-dev:amd64. 2021-05-18T14:11:04.6123739Z Preparing to unpack .../libnode-dev_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-05-18T14:11:04.6133520Z Unpacking libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-18T14:11:04.7000796Z Setting up libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-05-18T14:11:04.7031035Z Setting up libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-18T14:11:04.7060338Z Setting up libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-18T14:11:04.7087980Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:11:06.8622880Z Reading package lists... 2021-05-18T14:11:07.0329018Z Building dependency tree... 2021-05-18T14:11:07.0346138Z Reading state information... 2021-05-18T14:11:07.1905559Z The following additional packages will be installed: 2021-05-18T14:11:07.1908890Z libfftw3-bin libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-05-18T14:11:07.1913570Z Suggested packages: 2021-05-18T14:11:07.1915492Z libfftw3-doc 2021-05-18T14:11:07.2365462Z The following NEW packages will be installed: 2021-05-18T14:11:07.2372614Z libfftw3-bin libfftw3-dev libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-05-18T14:11:07.2547293Z 0 upgraded, 5 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:11:07.2548114Z Need to get 3986 kB of archives. 2021-05-18T14:11:07.2548944Z After this operation, 22.4 MB of additional disk space will be used. 2021-05-18T14:11:07.2551166Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-long3 amd64 3.3.8-2ubuntu1 [313 kB] 2021-05-18T14:11:07.2670099Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-quad3 amd64 3.3.8-2ubuntu1 [673 kB] 2021-05-18T14:11:07.2881167Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-single3 amd64 3.3.8-2ubuntu1 [756 kB] 2021-05-18T14:11:07.3095276Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-bin amd64 3.3.8-2ubuntu1 [32.2 kB] 2021-05-18T14:11:07.3103724Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-dev amd64 3.3.8-2ubuntu1 [2211 kB] 2021-05-18T14:11:07.7600444Z Fetched 3986 kB in 0s (30.7 MB/s) 2021-05-18T14:11:07.7921330Z Selecting previously unselected package libfftw3-long3:amd64. 2021-05-18T14:11:07.7993022Z (Reading database ... 2021-05-18T14:11:07.7993732Z (Reading database ... 5% 2021-05-18T14:11:07.7994540Z (Reading database ... 10% 2021-05-18T14:11:07.7995165Z (Reading database ... 15% 2021-05-18T14:11:07.7995768Z (Reading database ... 20% 2021-05-18T14:11:07.7996391Z (Reading database ... 25% 2021-05-18T14:11:07.7997077Z (Reading database ... 30% 2021-05-18T14:11:07.7997683Z (Reading database ... 35% 2021-05-18T14:11:07.7998295Z (Reading database ... 40% 2021-05-18T14:11:07.7998890Z (Reading database ... 45% 2021-05-18T14:11:07.7999774Z (Reading database ... 50% 2021-05-18T14:11:07.8021796Z (Reading database ... 55% 2021-05-18T14:11:07.8061575Z (Reading database ... 60% 2021-05-18T14:11:07.8101526Z (Reading database ... 65% 2021-05-18T14:11:07.8235411Z (Reading database ... 70% 2021-05-18T14:11:07.8259223Z (Reading database ... 75% 2021-05-18T14:11:07.8635914Z (Reading database ... 80% 2021-05-18T14:11:07.8965715Z (Reading database ... 85% 2021-05-18T14:11:07.9114871Z (Reading database ... 90% 2021-05-18T14:11:07.9195508Z (Reading database ... 95% 2021-05-18T14:11:07.9196613Z (Reading database ... 100% 2021-05-18T14:11:07.9197702Z (Reading database ... 265059 files and directories currently installed.) 2021-05-18T14:11:07.9326715Z Preparing to unpack .../libfftw3-long3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-18T14:11:07.9345526Z Unpacking libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-05-18T14:11:07.9922239Z Selecting previously unselected package libfftw3-quad3:amd64. 2021-05-18T14:11:08.0134500Z Preparing to unpack .../libfftw3-quad3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-18T14:11:08.0146900Z Unpacking libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-05-18T14:11:08.1041570Z Selecting previously unselected package libfftw3-single3:amd64. 2021-05-18T14:11:08.1273872Z Preparing to unpack .../libfftw3-single3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-18T14:11:08.1282391Z Unpacking libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-05-18T14:11:08.2201837Z Selecting previously unselected package libfftw3-bin. 2021-05-18T14:11:08.2420282Z Preparing to unpack .../libfftw3-bin_3.3.8-2ubuntu1_amd64.deb ... 2021-05-18T14:11:08.2429919Z Unpacking libfftw3-bin (3.3.8-2ubuntu1) ... 2021-05-18T14:11:08.2681989Z Selecting previously unselected package libfftw3-dev:amd64. 2021-05-18T14:11:08.2962067Z Preparing to unpack .../libfftw3-dev_3.3.8-2ubuntu1_amd64.deb ... 2021-05-18T14:11:08.2969421Z Unpacking libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-05-18T14:11:08.5657391Z Setting up libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-05-18T14:11:08.5686450Z Setting up libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-05-18T14:11:08.5711870Z Setting up libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-05-18T14:11:08.5750948Z Setting up libfftw3-bin (3.3.8-2ubuntu1) ... 2021-05-18T14:11:08.5776599Z Setting up libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-05-18T14:11:08.5815375Z Processing triggers for man-db (2.9.1-1) ... 2021-05-18T14:11:09.3341450Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:11:11.4831535Z Reading package lists... 2021-05-18T14:11:11.6632782Z Building dependency tree... 2021-05-18T14:11:11.6651996Z Reading state information... 2021-05-18T14:11:11.8193635Z The following additional packages will be installed: 2021-05-18T14:11:11.8195965Z libdcmtk14 2021-05-18T14:11:11.8656337Z The following NEW packages will be installed: 2021-05-18T14:11:11.8666501Z dcmtk libdcmtk14 2021-05-18T14:11:11.8846548Z 0 upgraded, 2 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:11:11.8847289Z Need to get 5546 kB of archives. 2021-05-18T14:11:11.8847986Z After this operation, 26.5 MB of additional disk space will be used. 2021-05-18T14:11:11.8849905Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdcmtk14 amd64 3.6.4-2.1build2 [4682 kB] 2021-05-18T14:11:11.9741481Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 dcmtk amd64 3.6.4-2.1build2 [864 kB] 2021-05-18T14:11:12.3882873Z Fetched 5546 kB in 0s (43.0 MB/s) 2021-05-18T14:11:12.4238724Z Selecting previously unselected package libdcmtk14. 2021-05-18T14:11:12.4239611Z (Reading database ... 2021-05-18T14:11:12.4240290Z (Reading database ... 5% 2021-05-18T14:11:12.4240750Z (Reading database ... 10% 2021-05-18T14:11:12.4241220Z (Reading database ... 15% 2021-05-18T14:11:12.4241676Z (Reading database ... 20% 2021-05-18T14:11:12.4242153Z (Reading database ... 25% 2021-05-18T14:11:12.4242622Z (Reading database ... 30% 2021-05-18T14:11:12.4243073Z (Reading database ... 35% 2021-05-18T14:11:12.4243532Z (Reading database ... 40% 2021-05-18T14:11:12.4243982Z (Reading database ... 45% 2021-05-18T14:11:12.4244441Z (Reading database ... 50% 2021-05-18T14:11:12.4284072Z (Reading database ... 55% 2021-05-18T14:11:12.4320684Z (Reading database ... 60% 2021-05-18T14:11:12.4359225Z (Reading database ... 65% 2021-05-18T14:11:12.4483530Z (Reading database ... 70% 2021-05-18T14:11:12.4509301Z (Reading database ... 75% 2021-05-18T14:11:12.4881981Z (Reading database ... 80% 2021-05-18T14:11:12.5221712Z (Reading database ... 85% 2021-05-18T14:11:12.5379791Z (Reading database ... 90% 2021-05-18T14:11:12.5465738Z (Reading database ... 95% 2021-05-18T14:11:12.5466397Z (Reading database ... 100% 2021-05-18T14:11:12.5467181Z (Reading database ... 265150 files and directories currently installed.) 2021-05-18T14:11:12.5602044Z Preparing to unpack .../libdcmtk14_3.6.4-2.1build2_amd64.deb ... 2021-05-18T14:11:12.5629153Z Unpacking libdcmtk14 (3.6.4-2.1build2) ... 2021-05-18T14:11:13.0321947Z Selecting previously unselected package dcmtk. 2021-05-18T14:11:13.0559764Z Preparing to unpack .../dcmtk_3.6.4-2.1build2_amd64.deb ... 2021-05-18T14:11:13.0624145Z Unpacking dcmtk (3.6.4-2.1build2) ... 2021-05-18T14:11:13.1983463Z Setting up libdcmtk14 (3.6.4-2.1build2) ... 2021-05-18T14:11:13.2036684Z Setting up dcmtk (3.6.4-2.1build2) ... 2021-05-18T14:11:13.2176820Z Adding `dcmtk' group to system ... 2021-05-18T14:11:13.2640239Z Adding `dcmtk' user to system ... 2021-05-18T14:11:13.3275435Z adduser: Warning: The home directory `/var/lib/dcmtk/db' does not belong to the user you are currently creating. 2021-05-18T14:11:13.5805727Z Processing triggers for man-db (2.9.1-1) ... 2021-05-18T14:11:15.1214480Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:11:17.2924064Z Reading package lists... 2021-05-18T14:11:17.4684734Z Building dependency tree... 2021-05-18T14:11:17.4702847Z Reading state information... 2021-05-18T14:11:17.7034552Z libsecret-1-dev is already the newest version (0.20.3-0ubuntu1). 2021-05-18T14:11:17.7035961Z 0 upgraded, 0 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:11:17.7646076Z Reading package lists... 2021-05-18T14:11:17.9453735Z Building dependency tree... 2021-05-18T14:11:17.9472130Z Reading state information... 2021-05-18T14:11:18.1984366Z libpng-dev is already the newest version (1.6.37-2). 2021-05-18T14:11:18.1985712Z libpng-dev set to manually installed. 2021-05-18T14:11:18.1986664Z 0 upgraded, 0 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:11:18.2610823Z Reading package lists... 2021-05-18T14:11:18.4407456Z Building dependency tree... 2021-05-18T14:11:18.4425392Z Reading state information... 2021-05-18T14:11:18.5992658Z The following additional packages will be installed: 2021-05-18T14:11:18.5995301Z libopenjp2-7 libpoppler-cpp0v5 libpoppler-dev libpoppler97 poppler-data 2021-05-18T14:11:18.5999307Z Suggested packages: 2021-05-18T14:11:18.6000966Z poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho 2021-05-18T14:11:18.6002711Z fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai 2021-05-18T14:11:18.6004089Z fonts-arphic-uming fonts-nanum 2021-05-18T14:11:18.6456580Z The following NEW packages will be installed: 2021-05-18T14:11:18.6458679Z libopenjp2-7 libpoppler-cpp-dev libpoppler-cpp0v5 libpoppler-dev 2021-05-18T14:11:18.6461795Z libpoppler97 poppler-data 2021-05-18T14:11:18.6634370Z 0 upgraded, 6 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:11:18.6635414Z Need to get 2582 kB of archives. 2021-05-18T14:11:18.6636305Z After this operation, 16.7 MB of additional disk space will be used. 2021-05-18T14:11:18.6638729Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 poppler-data all 0.4.9-2 [1475 kB] 2021-05-18T14:11:18.6825488Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopenjp2-7 amd64 2.3.1-1ubuntu4.20.04.1 [141 kB] 2021-05-18T14:11:18.6841903Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler97 amd64 0.86.1-0ubuntu1 [915 kB] 2021-05-18T14:11:18.6916461Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp0v5 amd64 0.86.1-0ubuntu1 [35.6 kB] 2021-05-18T14:11:18.6921005Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-dev amd64 0.86.1-0ubuntu1 [5336 B] 2021-05-18T14:11:18.6924298Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp-dev amd64 0.86.1-0ubuntu1 [10.4 kB] 2021-05-18T14:11:19.0873997Z Fetched 2582 kB in 0s (61.2 MB/s) 2021-05-18T14:11:19.1182540Z Selecting previously unselected package poppler-data. 2021-05-18T14:11:19.1256801Z (Reading database ... 2021-05-18T14:11:19.1257639Z (Reading database ... 5% 2021-05-18T14:11:19.1258284Z (Reading database ... 10% 2021-05-18T14:11:19.1258919Z (Reading database ... 15% 2021-05-18T14:11:19.1259532Z (Reading database ... 20% 2021-05-18T14:11:19.1260291Z (Reading database ... 25% 2021-05-18T14:11:19.1260953Z (Reading database ... 30% 2021-05-18T14:11:19.1261569Z (Reading database ... 35% 2021-05-18T14:11:19.1262165Z (Reading database ... 40% 2021-05-18T14:11:19.1262771Z (Reading database ... 45% 2021-05-18T14:11:19.1263379Z (Reading database ... 50% 2021-05-18T14:11:19.1285850Z (Reading database ... 55% 2021-05-18T14:11:19.1326267Z (Reading database ... 60% 2021-05-18T14:11:19.1367702Z (Reading database ... 65% 2021-05-18T14:11:19.1502846Z (Reading database ... 70% 2021-05-18T14:11:19.1527860Z (Reading database ... 75% 2021-05-18T14:11:19.1906896Z (Reading database ... 80% 2021-05-18T14:11:19.2237760Z (Reading database ... 85% 2021-05-18T14:11:19.2388879Z (Reading database ... 90% 2021-05-18T14:11:19.2470884Z (Reading database ... 95% 2021-05-18T14:11:19.2471507Z (Reading database ... 100% 2021-05-18T14:11:19.2472337Z (Reading database ... 265385 files and directories currently installed.) 2021-05-18T14:11:19.2598740Z Preparing to unpack .../0-poppler-data_0.4.9-2_all.deb ... 2021-05-18T14:11:19.2613545Z Unpacking poppler-data (0.4.9-2) ... 2021-05-18T14:11:19.4807486Z Selecting previously unselected package libopenjp2-7:amd64. 2021-05-18T14:11:19.5085994Z Preparing to unpack .../1-libopenjp2-7_2.3.1-1ubuntu4.20.04.1_amd64.deb ... 2021-05-18T14:11:19.5109328Z Unpacking libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-05-18T14:11:19.5446396Z Selecting previously unselected package libpoppler97:amd64. 2021-05-18T14:11:19.5728793Z Preparing to unpack .../2-libpoppler97_0.86.1-0ubuntu1_amd64.deb ... 2021-05-18T14:11:19.5739047Z Unpacking libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-05-18T14:11:19.6806804Z Selecting previously unselected package libpoppler-cpp0v5:amd64. 2021-05-18T14:11:19.7089237Z Preparing to unpack .../3-libpoppler-cpp0v5_0.86.1-0ubuntu1_amd64.deb ... 2021-05-18T14:11:19.7099384Z Unpacking libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-05-18T14:11:19.7353002Z Selecting previously unselected package libpoppler-dev:amd64. 2021-05-18T14:11:19.7630133Z Preparing to unpack .../4-libpoppler-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-05-18T14:11:19.7640957Z Unpacking libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-18T14:11:19.7881174Z Selecting previously unselected package libpoppler-cpp-dev:amd64. 2021-05-18T14:11:19.8163809Z Preparing to unpack .../5-libpoppler-cpp-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-05-18T14:11:19.8170198Z Unpacking libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-18T14:11:19.8726175Z Setting up poppler-data (0.4.9-2) ... 2021-05-18T14:11:19.8809772Z Setting up libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-05-18T14:11:19.8834293Z Setting up libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-05-18T14:11:19.8877105Z Setting up libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-05-18T14:11:19.8916986Z Setting up libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-18T14:11:19.8937476Z Setting up libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-18T14:11:19.8979903Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-18T14:11:19.9549813Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:11:22.1191704Z Reading package lists... 2021-05-18T14:11:22.2967143Z Building dependency tree... 2021-05-18T14:11:22.2979236Z Reading state information... 2021-05-18T14:11:22.4628628Z The following additional packages will be installed: 2021-05-18T14:11:22.4634031Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libsz2 2021-05-18T14:11:22.4638645Z Suggested packages: 2021-05-18T14:11:22.4639700Z libhdf5-doc 2021-05-18T14:11:22.5112275Z The following NEW packages will be installed: 2021-05-18T14:11:22.5118668Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libhdf5-dev 2021-05-18T14:11:22.5122601Z libsz2 2021-05-18T14:11:22.5314202Z 0 upgraded, 7 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:11:22.5314991Z Need to get 4074 kB of archives. 2021-05-18T14:11:22.5315704Z After this operation, 17.6 MB of additional disk space will be used. 2021-05-18T14:11:22.5317810Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 hdf5-helpers amd64 1.10.4+repack-11ubuntu1 [13.6 kB] 2021-05-18T14:11:22.5333830Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec0 amd64 1.0.4-1 [19.1 kB] 2021-05-18T14:11:22.5342910Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsz2 amd64 1.0.4-1 [5188 B] 2021-05-18T14:11:22.5348443Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-103 amd64 1.10.4+repack-11ubuntu1 [1311 kB] 2021-05-18T14:11:22.5841124Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-cpp-103 amd64 1.10.4+repack-11ubuntu1 [120 kB] 2021-05-18T14:11:22.5976727Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec-dev amd64 1.0.4-1 [16.9 kB] 2021-05-18T14:11:22.6003807Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-dev amd64 1.10.4+repack-11ubuntu1 [2589 kB] 2021-05-18T14:11:23.1153419Z Fetched 4074 kB in 0s (19.4 MB/s) 2021-05-18T14:11:23.1482498Z Selecting previously unselected package hdf5-helpers. 2021-05-18T14:11:23.1510586Z (Reading database ... 2021-05-18T14:11:23.1511124Z (Reading database ... 5% 2021-05-18T14:11:23.1511598Z (Reading database ... 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2021-05-18T14:11:23.2709953Z (Reading database ... 265945 files and directories currently installed.) 2021-05-18T14:11:23.2835019Z Preparing to unpack .../0-hdf5-helpers_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-18T14:11:23.2851001Z Unpacking hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-05-18T14:11:23.3074014Z Selecting previously unselected package libaec0:amd64. 2021-05-18T14:11:23.3349072Z Preparing to unpack .../1-libaec0_1.0.4-1_amd64.deb ... 2021-05-18T14:11:23.3375705Z Unpacking libaec0:amd64 (1.0.4-1) ... 2021-05-18T14:11:23.3594876Z Selecting previously unselected package libsz2:amd64. 2021-05-18T14:11:23.3872940Z Preparing to unpack .../2-libsz2_1.0.4-1_amd64.deb ... 2021-05-18T14:11:23.3882547Z Unpacking libsz2:amd64 (1.0.4-1) ... 2021-05-18T14:11:23.4242260Z Selecting previously unselected package libhdf5-103:amd64. 2021-05-18T14:11:23.4444419Z Preparing to unpack .../3-libhdf5-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-18T14:11:23.4458596Z Unpacking libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-18T14:11:23.5882317Z Selecting previously unselected package libhdf5-cpp-103:amd64. 2021-05-18T14:11:23.6127496Z Preparing to unpack .../4-libhdf5-cpp-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-18T14:11:23.6142509Z Unpacking libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-18T14:11:23.6522726Z Selecting previously unselected package libaec-dev:amd64. 2021-05-18T14:11:23.6753056Z Preparing to unpack .../5-libaec-dev_1.0.4-1_amd64.deb ... 2021-05-18T14:11:23.6763544Z Unpacking libaec-dev:amd64 (1.0.4-1) ... 2021-05-18T14:11:23.7081567Z Selecting previously unselected package libhdf5-dev. 2021-05-18T14:11:23.7311760Z Preparing to unpack .../6-libhdf5-dev_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-18T14:11:23.7323231Z Unpacking libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-05-18T14:11:24.0264871Z Setting up hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-05-18T14:11:24.0291171Z Setting up libaec0:amd64 (1.0.4-1) ... 2021-05-18T14:11:24.0313142Z Setting up libsz2:amd64 (1.0.4-1) ... 2021-05-18T14:11:24.0340301Z Setting up libaec-dev:amd64 (1.0.4-1) ... 2021-05-18T14:11:24.0376002Z Setting up libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-18T14:11:24.0417071Z Setting up libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-18T14:11:24.0455140Z Setting up libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-05-18T14:11:24.0530606Z update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 2021-05-18T14:11:24.0565105Z Processing triggers for man-db (2.9.1-1) ... 2021-05-18T14:11:24.7938251Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:11:26.9307277Z Reading package lists... 2021-05-18T14:11:27.1030238Z Building dependency tree... 2021-05-18T14:11:27.1048256Z Reading state information... 2021-05-18T14:11:27.2586783Z The following additional packages will be installed: 2021-05-18T14:11:27.2589997Z libdrm-dev libgl-dev libglu1-mesa libglx-dev 2021-05-18T14:11:27.3062834Z The following NEW packages will be installed: 2021-05-18T14:11:27.3065888Z libdrm-dev libgl-dev libglu1-mesa libglu1-mesa-dev libglx-dev 2021-05-18T14:11:27.3067281Z mesa-common-dev 2021-05-18T14:11:27.3317850Z 0 upgraded, 6 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:11:27.3318536Z Need to get 1761 kB of archives. 2021-05-18T14:11:27.3319253Z After this operation, 5442 kB of additional disk space will be used. 2021-05-18T14:11:27.3321395Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libdrm-dev amd64 2.4.102-1ubuntu1~20.04.1 [126 kB] 2021-05-18T14:11:27.3393163Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libglx-dev amd64 1.3.2-1~ubuntu0.20.04.1 [14.0 kB] 2021-05-18T14:11:27.3407675Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [97.8 kB] 2021-05-18T14:11:27.3485895Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa amd64 9.0.1-1build1 [168 kB] 2021-05-18T14:11:27.3587006Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa-dev amd64 9.0.1-1build1 [207 kB] 2021-05-18T14:11:27.3712210Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-common-dev amd64 20.2.6-0ubuntu0.20.04.1 [1148 kB] 2021-05-18T14:11:27.8248953Z Fetched 1761 kB in 0s (14.4 MB/s) 2021-05-18T14:11:27.8534811Z Selecting previously unselected package libdrm-dev:amd64. 2021-05-18T14:11:27.8606835Z (Reading database ... 2021-05-18T14:11:27.8607646Z (Reading database ... 5% 2021-05-18T14:11:27.8608261Z (Reading database ... 10% 2021-05-18T14:11:27.8609038Z (Reading database ... 15% 2021-05-18T14:11:27.8609587Z (Reading database ... 20% 2021-05-18T14:11:27.8610166Z (Reading database ... 25% 2021-05-18T14:11:27.8610735Z (Reading database ... 30% 2021-05-18T14:11:27.8611288Z (Reading 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(2.4.102-1ubuntu1~20.04.1) ... 2021-05-18T14:11:28.0360396Z Selecting previously unselected package libglx-dev:amd64. 2021-05-18T14:11:28.0597131Z Preparing to unpack .../1-libglx-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-18T14:11:28.0606945Z Unpacking libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-18T14:11:28.0945390Z Selecting previously unselected package libgl-dev:amd64. 2021-05-18T14:11:28.1189571Z Preparing to unpack .../2-libgl-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-18T14:11:28.1196871Z Unpacking libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-18T14:11:28.1602373Z Selecting previously unselected package libglu1-mesa:amd64. 2021-05-18T14:11:28.1832989Z Preparing to unpack .../3-libglu1-mesa_9.0.1-1build1_amd64.deb ... 2021-05-18T14:11:28.1853344Z Unpacking libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-05-18T14:11:28.2242417Z Selecting previously unselected package libglu1-mesa-dev:amd64. 2021-05-18T14:11:28.2509022Z Preparing to unpack .../4-libglu1-mesa-dev_9.0.1-1build1_amd64.deb ... 2021-05-18T14:11:28.2520613Z Unpacking libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-05-18T14:11:28.3002653Z Selecting previously unselected package mesa-common-dev:amd64. 2021-05-18T14:11:28.3247315Z Preparing to unpack .../5-mesa-common-dev_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-18T14:11:28.3255490Z Unpacking mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-18T14:11:28.4764046Z Setting up libdrm-dev:amd64 (2.4.102-1ubuntu1~20.04.1) ... 2021-05-18T14:11:28.4790887Z Setting up libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-18T14:11:28.4812835Z Setting up libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-05-18T14:11:28.4833268Z Setting up libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-18T14:11:28.4855097Z Setting up libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-05-18T14:11:28.4877120Z Setting up mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-18T14:11:28.4902236Z Processing triggers for man-db (2.9.1-1) ... 2021-05-18T14:11:29.8261258Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:11:31.9541869Z Reading package lists... 2021-05-18T14:11:32.1275413Z Building dependency tree... 2021-05-18T14:11:32.1293538Z Reading state information... 2021-05-18T14:11:32.2852139Z The following additional packages will be installed: 2021-05-18T14:11:32.2855254Z libprotobuf-lite17 libprotoc17 2021-05-18T14:11:32.3316195Z The following NEW packages will be installed: 2021-05-18T14:11:32.3320006Z libprotobuf-dev libprotobuf-lite17 libprotoc-dev libprotoc17 2021-05-18T14:11:32.3321232Z protobuf-compiler 2021-05-18T14:11:32.3501414Z 0 upgraded, 5 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:11:32.3502479Z Need to get 2754 kB of archives. 2021-05-18T14:11:32.3503603Z After this operation, 19.9 MB of additional disk space will be used. 2021-05-18T14:11:32.3505957Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-lite17 amd64 3.6.1.3-2ubuntu5 [132 kB] 2021-05-18T14:11:32.3536122Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc17 amd64 3.6.1.3-2ubuntu5 [646 kB] 2021-05-18T14:11:32.3659976Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-dev amd64 3.6.1.3-2ubuntu5 [1155 kB] 2021-05-18T14:11:32.3929421Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc-dev amd64 3.6.1.3-2ubuntu5 [793 kB] 2021-05-18T14:11:32.4264924Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 protobuf-compiler amd64 3.6.1.3-2ubuntu5 [27.6 kB] 2021-05-18T14:11:32.8195616Z Fetched 2754 kB in 0s (29.5 MB/s) 2021-05-18T14:11:32.8484450Z Selecting previously unselected package libprotobuf-lite17:amd64. 2021-05-18T14:11:32.8559214Z (Reading database ... 2021-05-18T14:11:32.8559898Z (Reading database ... 5% 2021-05-18T14:11:32.8560414Z (Reading database ... 10% 2021-05-18T14:11:32.8560886Z (Reading database ... 15% 2021-05-18T14:11:32.8561362Z (Reading 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2021-05-18T14:11:32.9851631Z Preparing to unpack .../libprotobuf-lite17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-18T14:11:32.9881003Z Unpacking libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-18T14:11:33.0282126Z Selecting previously unselected package libprotoc17:amd64. 2021-05-18T14:11:33.0526657Z Preparing to unpack .../libprotoc17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-18T14:11:33.0537640Z Unpacking libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-18T14:11:33.1402029Z Selecting previously unselected package libprotobuf-dev:amd64. 2021-05-18T14:11:33.1627714Z Preparing to unpack .../libprotobuf-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-18T14:11:33.1642166Z Unpacking libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-18T14:11:33.3163237Z Selecting previously unselected package libprotoc-dev:amd64. 2021-05-18T14:11:33.3394462Z Preparing to unpack .../libprotoc-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-18T14:11:33.3410754Z Unpacking libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-18T14:11:33.4522253Z Selecting previously unselected package protobuf-compiler. 2021-05-18T14:11:33.4754202Z Preparing to unpack .../protobuf-compiler_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-18T14:11:33.4773915Z Unpacking protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-05-18T14:11:33.5361180Z Setting up libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-18T14:11:33.5391523Z Setting up protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-05-18T14:11:33.5406810Z Setting up libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-18T14:11:33.5427691Z Setting up libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-18T14:11:33.5450618Z Setting up libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-18T14:11:33.5488204Z Processing triggers for man-db (2.9.1-1) ... 2021-05-18T14:11:34.2638012Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:11:36.4230081Z Reading package lists... 2021-05-18T14:11:36.5913327Z Building dependency tree... 2021-05-18T14:11:36.5931842Z Reading state information... 2021-05-18T14:11:36.7467770Z The following additional packages will be installed: 2021-05-18T14:11:36.7471777Z i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 libasyncns0 2021-05-18T14:11:36.7473709Z libavc1394-0 libavcodec58 libavdevice58 libavfilter7 libavformat58 2021-05-18T14:11:36.7474991Z libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 libcaca0 2021-05-18T14:11:36.7476482Z libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 libcodec2-0.9 2021-05-18T14:11:36.7478143Z libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 libigdgmm11 2021-05-18T14:11:36.7479607Z libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-05-18T14:11:36.7480976Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-05-18T14:11:36.7482399Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-05-18T14:11:36.7483700Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-05-18T14:11:36.7486206Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-05-18T14:11:36.7487968Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-05-18T14:11:36.7489260Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-05-18T14:11:36.7490511Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-05-18T14:11:36.7491734Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-05-18T14:11:36.7492516Z Suggested packages: 2021-05-18T14:11:36.7493628Z ffmpeg-doc i965-va-driver-shaders libbluray-bdj jackd2 libportaudio2 2021-05-18T14:11:36.7494985Z opus-tools pulseaudio libraw1394-doc serdi sndiod sordi speex opencl-icd 2021-05-18T14:11:36.7496468Z libvdpau-va-gl1 nvidia-vdpau-driver nvidia-legacy-340xx-vdpau-driver 2021-05-18T14:11:36.7497818Z nvidia-legacy-304xx-vdpau-driver 2021-05-18T14:11:36.8187491Z The following NEW packages will be installed: 2021-05-18T14:11:36.8190141Z ffmpeg i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 2021-05-18T14:11:36.8191839Z libasyncns0 libavc1394-0 libavcodec58 libavdevice58 libavfilter7 2021-05-18T14:11:36.8193249Z libavformat58 libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 2021-05-18T14:11:36.8194827Z libcaca0 libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 2021-05-18T14:11:36.8196466Z libcodec2-0.9 libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 2021-05-18T14:11:36.8198071Z libigdgmm11 libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-05-18T14:11:36.8199867Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-05-18T14:11:36.8201517Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-05-18T14:11:36.8203059Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-05-18T14:11:36.8204593Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-05-18T14:11:36.8206203Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-05-18T14:11:36.8207714Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-05-18T14:11:36.8209829Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-05-18T14:11:36.8211312Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-05-18T14:11:36.8388212Z 0 upgraded, 76 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:11:36.8389394Z Need to get 47.1 MB of archives. 2021-05-18T14:11:36.8390537Z After this operation, 195 MB of additional disk space will be used. 2021-05-18T14:11:36.8392507Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaom0 amd64 1.0.0.errata1-3build1 [1160 kB] 2021-05-18T14:11:36.8880806Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva2 amd64 2.7.0-2 [53.5 kB] 2021-05-18T14:11:36.8888294Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-drm2 amd64 2.7.0-2 [7044 B] 2021-05-18T14:11:36.8891157Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-x11-2 amd64 2.7.0-2 [11.9 kB] 2021-05-18T14:11:36.8896972Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvdpau1 amd64 1.3-1ubuntu2 [25.6 kB] 2021-05-18T14:11:36.8902757Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1ubuntu1 [30.3 kB] 2021-05-18T14:11:36.8908820Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavutil56 amd64 7:4.2.4-1ubuntu0.1 [241 kB] 2021-05-18T14:11:36.8934623Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcodec2-0.9 amd64 0.9.2-2 [7886 kB] 2021-05-18T14:11:36.9534269Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgsm1 amd64 1.0.18-2 [24.4 kB] 2021-05-18T14:11:36.9538865Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmp3lame0 amd64 3.100-3 [133 kB] 2021-05-18T14:11:36.9551485Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libopus0 amd64 1.3.1-0ubuntu1 [191 kB] 2021-05-18T14:11:36.9569297Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libshine3 amd64 3.1.1-2 [23.2 kB] 2021-05-18T14:11:36.9575800Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsnappy1v5 amd64 1.1.8-1build1 [16.7 kB] 2021-05-18T14:11:36.9584254Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libspeex1 amd64 1.2~rc1.2-1.1ubuntu1 [53.2 kB] 2021-05-18T14:11:36.9591578Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsoxr0 amd64 0.1.3-2build1 [78.0 kB] 2021-05-18T14:11:36.9599605Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswresample3 amd64 7:4.2.4-1ubuntu0.1 [57.1 kB] 2021-05-18T14:11:36.9607897Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtheora0 amd64 1.1.1+dfsg.1-15ubuntu2 [162 kB] 2021-05-18T14:11:36.9623159Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtwolame0 amd64 0.4.0-2 [47.6 kB] 2021-05-18T14:11:36.9629655Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvorbisenc2 amd64 1.3.6-2ubuntu1 [70.7 kB] 2021-05-18T14:11:36.9637318Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwavpack1 amd64 5.2.0-1ubuntu0.1 [77.3 kB] 2021-05-18T14:11:36.9647410Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx264-155 amd64 2:0.155.2917+git0a84d98-2 [521 kB] 2021-05-18T14:11:36.9687181Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx265-179 amd64 3.2.1-1build1 [1060 kB] 2021-05-18T14:11:36.9766378Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxvidcore4 amd64 2:1.3.7-1 [201 kB] 2021-05-18T14:11:36.9785136Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi-common all 0.2.35-17 [32.5 kB] 2021-05-18T14:11:36.9790651Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi0 amd64 0.2.35-17 [237 kB] 2021-05-18T14:11:36.9809043Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavcodec58 amd64 7:4.2.4-1ubuntu0.1 [4876 kB] 2021-05-18T14:11:37.0261998Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libraw1394-11 amd64 2.1.2-1 [30.7 kB] 2021-05-18T14:11:37.0267059Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavc1394-0 amd64 0.5.4-5 [16.2 kB] 2021-05-18T14:11:37.0272325Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libass9 amd64 1:0.14.0-2 [88.0 kB] 2021-05-18T14:11:37.0283471Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbluray2 amd64 1:1.2.0-1 [138 kB] 2021-05-18T14:11:37.0297546Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libchromaprint1 amd64 1.4.3-3build1 [37.6 kB] 2021-05-18T14:11:37.0301191Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgme0 amd64 0.6.2-1build1 [123 kB] 2021-05-18T14:11:37.0311879Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmpg123-0 amd64 1.25.13-1 [124 kB] 2021-05-18T14:11:37.0323416Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenmpt0 amd64 0.4.11-1build1 [599 kB] 2021-05-18T14:11:37.0370035Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-gcrypt-4 amd64 0.9.3-2ubuntu2.1 [201 kB] 2021-05-18T14:11:37.0391600Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavformat58 amd64 7:4.2.4-1ubuntu0.1 [981 kB] 2021-05-18T14:11:37.0486834Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbs2b0 amd64 3.1.0+dfsg-2.2build1 [10.2 kB] 2021-05-18T14:11:37.0488868Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libflite1 amd64 2.1-release-3 [12.8 MB] 2021-05-18T14:11:37.1456295Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libserd-0-0 amd64 0.30.2-1 [46.6 kB] 2021-05-18T14:11:37.1461876Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsord-0-0 amd64 0.16.4-1 [19.5 kB] 2021-05-18T14:11:37.1465064Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsratom-0-0 amd64 0.6.4-1 [16.9 kB] 2021-05-18T14:11:37.1469332Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 liblilv-0-0 amd64 0.24.6-1ubuntu0.1 [40.6 kB] 2021-05-18T14:11:37.1474003Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmysofa1 amd64 1.0~dfsg0-1 [39.2 kB] 2021-05-18T14:11:37.1475860Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libpostproc55 amd64 7:4.2.4-1ubuntu0.1 [55.3 kB] 2021-05-18T14:11:37.1481907Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsamplerate0 amd64 0.1.9-2 [939 kB] 2021-05-18T14:11:37.1552514Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 librubberband2 amd64 1.8.2-1build1 [89.4 kB] 2021-05-18T14:11:37.1559865Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswscale5 amd64 7:4.2.4-1ubuntu0.1 [156 kB] 2021-05-18T14:11:37.1576851Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libvidstab1.1 amd64 1.1.0-2 [35.0 kB] 2021-05-18T14:11:37.1580746Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavfilter7 amd64 7:4.2.4-1ubuntu0.1 [1084 kB] 2021-05-18T14:11:37.1683114Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcaca0 amd64 0.99.beta19-2.1ubuntu1.20.04.1 [202 kB] 2021-05-18T14:11:37.1709774Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio18 amd64 2.0.0-2 [58.6 kB] 2021-05-18T14:11:37.1717917Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-cdda2 amd64 10.2+2.0.0-1 [17.6 kB] 2021-05-18T14:11:37.1719886Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-paranoia2 amd64 10.2+2.0.0-1 [16.2 kB] 2021-05-18T14:11:37.1727182Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdc1394-22 amd64 2.2.5-2.1 [79.6 kB] 2021-05-18T14:11:37.1739421Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libiec61883-0 amd64 1.2.0-3 [24.3 kB] 2021-05-18T14:11:37.1741493Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjack-jackd2-0 amd64 1.9.12~dfsg-2ubuntu2 [267 kB] 2021-05-18T14:11:37.1762721Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal-data all 1:1.19.1-1 [162 kB] 2021-05-18T14:11:37.1777724Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsndio7.0 amd64 1.5.0-3 [24.5 kB] 2021-05-18T14:11:37.1780582Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal1 amd64 1:1.19.1-1 [492 kB] 2021-05-18T14:11:37.1821647Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasyncns0 amd64 0.8-6 [12.1 kB] 2021-05-18T14:11:37.1823206Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libflac8 amd64 1.3.3-1build1 [103 kB] 2021-05-18T14:11:37.1831910Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsndfile1 amd64 1.0.28-7 [170 kB] 2021-05-18T14:11:37.1846913Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libpulse0 amd64 1:13.99.1-1ubuntu3.10 [262 kB] 2021-05-18T14:11:37.1872388Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsdl2-2.0-0 amd64 2.0.10+dfsg1-3 [407 kB] 2021-05-18T14:11:37.1904825Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavdevice58 amd64 7:4.2.4-1ubuntu0.1 [74.3 kB] 2021-05-18T14:11:37.1914927Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavresample4 amd64 7:4.2.4-1ubuntu0.1 [54.2 kB] 2021-05-18T14:11:37.1921673Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 ffmpeg amd64 7:4.2.4-1ubuntu0.1 [1453 kB] 2021-05-18T14:11:37.2060531Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libigdgmm11 amd64 20.1.1+ds1-1 [111 kB] 2021-05-18T14:11:37.2069582Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 intel-media-va-driver amd64 20.1.1+dfsg1-1 [1764 kB] 2021-05-18T14:11:37.2203267Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaacs0 amd64 0.9.0-2 [50.1 kB] 2021-05-18T14:11:37.2205099Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbdplus0 amd64 0.1.2-3 [47.3 kB] 2021-05-18T14:11:37.2209145Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 mesa-va-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2618 kB] 2021-05-18T14:11:37.2454360Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-vdpau-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2744 kB] 2021-05-18T14:11:37.2708763Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 i965-va-driver amd64 2.4.0-0ubuntu1 [924 kB] 2021-05-18T14:11:37.2775879Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 va-driver-all amd64 2.7.0-2 [4020 B] 2021-05-18T14:11:37.2778288Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 vdpau-driver-all amd64 1.3-1ubuntu2 [4596 B] 2021-05-18T14:11:37.8335698Z Fetched 47.1 MB in 0s (104 MB/s) 2021-05-18T14:11:37.8652251Z Selecting previously unselected package libaom0:amd64. 2021-05-18T14:11:37.8726824Z (Reading database ... 2021-05-18T14:11:37.8727721Z (Reading database ... 5% 2021-05-18T14:11:37.8728363Z (Reading database ... 10% 2021-05-18T14:11:37.8728992Z (Reading database ... 15% 2021-05-18T14:11:37.8729671Z (Reading database ... 20% 2021-05-18T14:11:37.8730299Z (Reading database ... 25% 2021-05-18T14:11:37.8730899Z (Reading database ... 30% 2021-05-18T14:11:37.8731517Z (Reading database ... 35% 2021-05-18T14:11:37.8732127Z (Reading database ... 40% 2021-05-18T14:11:37.8732723Z (Reading database ... 45% 2021-05-18T14:11:37.8733340Z (Reading database ... 50% 2021-05-18T14:11:37.8767844Z (Reading database ... 55% 2021-05-18T14:11:37.8802854Z (Reading database ... 60% 2021-05-18T14:11:37.8841328Z (Reading database ... 65% 2021-05-18T14:11:37.8972530Z (Reading database ... 70% 2021-05-18T14:11:37.9095177Z (Reading database ... 75% 2021-05-18T14:11:37.9381647Z (Reading database ... 80% 2021-05-18T14:11:37.9730858Z (Reading database ... 85% 2021-05-18T14:11:37.9884990Z (Reading database ... 90% 2021-05-18T14:11:37.9968492Z (Reading database ... 95% 2021-05-18T14:11:37.9969103Z (Reading database ... 100% 2021-05-18T14:11:37.9969920Z (Reading database ... 266807 files and directories currently installed.) 2021-05-18T14:11:38.0098203Z Preparing to unpack .../00-libaom0_1.0.0.errata1-3build1_amd64.deb ... 2021-05-18T14:11:38.0131487Z Unpacking libaom0:amd64 (1.0.0.errata1-3build1) ... 2021-05-18T14:11:38.1422699Z Selecting previously unselected package libva2:amd64. 2021-05-18T14:11:38.1705670Z Preparing to unpack .../01-libva2_2.7.0-2_amd64.deb ... 2021-05-18T14:11:38.1714918Z Unpacking libva2:amd64 (2.7.0-2) ... 2021-05-18T14:11:38.2001137Z Selecting previously unselected package libva-drm2:amd64. 2021-05-18T14:11:38.2284483Z Preparing to unpack .../02-libva-drm2_2.7.0-2_amd64.deb ... 2021-05-18T14:11:38.2293948Z Unpacking libva-drm2:amd64 (2.7.0-2) ... 2021-05-18T14:11:38.2562259Z Selecting previously unselected package libva-x11-2:amd64. 2021-05-18T14:11:38.2824883Z Preparing to unpack .../03-libva-x11-2_2.7.0-2_amd64.deb ... 2021-05-18T14:11:38.2833082Z Unpacking libva-x11-2:amd64 (2.7.0-2) ... 2021-05-18T14:11:38.3086361Z Selecting previously unselected package libvdpau1:amd64. 2021-05-18T14:11:38.3369643Z Preparing to unpack .../04-libvdpau1_1.3-1ubuntu2_amd64.deb ... 2021-05-18T14:11:38.3385674Z Unpacking libvdpau1:amd64 (1.3-1ubuntu2) ... 2021-05-18T14:11:38.3662310Z Selecting previously unselected package ocl-icd-libopencl1:amd64. 2021-05-18T14:11:38.3942347Z Preparing to unpack .../05-ocl-icd-libopencl1_2.2.11-1ubuntu1_amd64.deb ... 2021-05-18T14:11:38.3952890Z Unpacking ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... 2021-05-18T14:11:38.4211630Z Selecting previously unselected package libavutil56:amd64. 2021-05-18T14:11:38.4496876Z Preparing to unpack .../06-libavutil56_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-05-18T14:11:38.4509477Z Unpacking libavutil56:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-18T14:11:38.5001460Z Selecting previously unselected package libcodec2-0.9:amd64. 2021-05-18T14:11:38.5227307Z Preparing to unpack .../07-libcodec2-0.9_0.9.2-2_amd64.deb ... 2021-05-18T14:11:38.5236097Z Unpacking libcodec2-0.9:amd64 (0.9.2-2) ... 2021-05-18T14:11:39.1954681Z Selecting previously unselected package libgsm1:amd64. 2021-05-18T14:11:39.2234547Z Preparing to unpack .../08-libgsm1_1.0.18-2_amd64.deb ... 2021-05-18T14:11:39.2244253Z Unpacking libgsm1:amd64 (1.0.18-2) ... 2021-05-18T14:11:39.2470966Z Selecting previously unselected package libmp3lame0:amd64. 2021-05-18T14:11:39.2751507Z Preparing to unpack .../09-libmp3lame0_3.100-3_amd64.deb ... 2021-05-18T14:11:39.2770060Z Unpacking libmp3lame0:amd64 (3.100-3) ... 2021-05-18T14:11:39.3105323Z Selecting previously unselected package libopus0:amd64. 2021-05-18T14:11:39.3388065Z Preparing to unpack .../10-libopus0_1.3.1-0ubuntu1_amd64.deb ... 2021-05-18T14:11:39.3397707Z Unpacking libopus0:amd64 (1.3.1-0ubuntu1) ... 2021-05-18T14:11:39.3778812Z Selecting previously unselected package libshine3:amd64. 2021-05-18T14:11:39.4063605Z Preparing to unpack .../11-libshine3_3.1.1-2_amd64.deb ... 2021-05-18T14:11:39.4081733Z Unpacking libshine3:amd64 (3.1.1-2) ... 2021-05-18T14:11:39.4321477Z Selecting previously unselected package libsnappy1v5:amd64. 2021-05-18T14:11:39.4604459Z Preparing to unpack .../12-libsnappy1v5_1.1.8-1build1_amd64.deb ... 2021-05-18T14:11:39.4619588Z Unpacking libsnappy1v5:amd64 (1.1.8-1build1) ... 2021-05-18T14:11:39.4845229Z Selecting previously unselected package libspeex1:amd64. 2021-05-18T14:11:39.5128662Z Preparing to unpack .../13-libspeex1_1.2~rc1.2-1.1ubuntu1_amd64.deb ... 2021-05-18T14:11:39.5138403Z Unpacking libspeex1:amd64 (1.2~rc1.2-1.1ubuntu1) ... 2021-05-18T14:11:39.5427641Z Selecting previously unselected package libsoxr0:amd64. 2021-05-18T14:11:39.5711725Z Preparing to unpack .../14-libsoxr0_0.1.3-2build1_amd64.deb ... 2021-05-18T14:11:39.5725358Z Unpacking libsoxr0:amd64 (0.1.3-2build1) ... 2021-05-18T14:11:39.6026372Z Selecting previously unselected package libswresample3:amd64. 2021-05-18T14:11:39.6309863Z Preparing to unpack .../15-libswresample3_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-05-18T14:11:39.6318899Z Unpacking libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-18T14:11:39.6587588Z Selecting previously unselected package libtheora0:amd64. 2021-05-18T14:11:39.6870199Z Preparing to unpack .../16-libtheora0_1.1.1+dfsg.1-15ubuntu2_amd64.deb ... 2021-05-18T14:11:39.6879816Z Unpacking libtheora0:amd64 (1.1.1+dfsg.1-15ubuntu2) ... 2021-05-18T14:11:39.7265402Z Selecting previously unselected package libtwolame0:amd64. 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2021-05-18T14:11:46.2034635Z Setting up libshine3:amd64 (3.1.1-2) ... 2021-05-18T14:11:46.2075530Z Setting up libcaca0:amd64 (0.99.beta19-2.1ubuntu1.20.04.1) ... 2021-05-18T14:11:46.2116271Z Setting up libtwolame0:amd64 (0.4.0-2) ... 2021-05-18T14:11:46.2141053Z Setting up libgsm1:amd64 (1.0.18-2) ... 2021-05-18T14:11:46.2161142Z Setting up libx264-155:amd64 (2:0.155.2917+git0a84d98-2) ... 2021-05-18T14:11:46.2181385Z Setting up libx265-179:amd64 (3.2.1-1build1) ... 2021-05-18T14:11:46.2201785Z Setting up libsoxr0:amd64 (0.1.3-2build1) ... 2021-05-18T14:11:46.2223417Z Setting up libaom0:amd64 (1.0.0.errata1-3build1) ... 2021-05-18T14:11:46.2254480Z Setting up libmysofa1:amd64 (1.0~dfsg0-1) ... 2021-05-18T14:11:46.2299397Z Setting up libdc1394-22:amd64 (2.2.5-2.1) ... 2021-05-18T14:11:46.2330092Z Setting up libcdio18:amd64 (2.0.0-2) ... 2021-05-18T14:11:46.2370751Z Setting up libxvidcore4:amd64 (2:1.3.7-1) ... 2021-05-18T14:11:46.2397647Z Setting up libsnappy1v5:amd64 (1.1.8-1build1) 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Setting up ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... 2021-05-18T14:11:46.2990068Z Setting up libasyncns0:amd64 (0.8-6) ... 2021-05-18T14:11:46.3019251Z Setting up libvdpau1:amd64 (1.3-1ubuntu2) ... 2021-05-18T14:11:46.3063734Z Setting up libwavpack1:amd64 (5.2.0-1ubuntu0.1) ... 2021-05-18T14:11:46.3122451Z Setting up libbs2b0:amd64 (3.1.0+dfsg-2.2build1) ... 2021-05-18T14:11:46.3153415Z Setting up libtheora0:amd64 (1.1.1+dfsg.1-15ubuntu2) ... 2021-05-18T14:11:46.3174589Z Setting up libopenal-data (1:1.19.1-1) ... 2021-05-18T14:11:46.3201280Z Setting up mesa-va-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-18T14:11:46.3249038Z Setting up libbluray2:amd64 (1:1.2.0-1) ... 2021-05-18T14:11:46.3287711Z Setting up libsamplerate0:amd64 (0.1.9-2) ... 2021-05-18T14:11:46.3354163Z Setting up libva-x11-2:amd64 (2.7.0-2) ... 2021-05-18T14:11:46.3388147Z Setting up libopenmpt0:amd64 (0.4.11-1build1) ... 2021-05-18T14:11:46.3445547Z Setting up libzvbi-common (0.2.35-17) ... 2021-05-18T14:11:46.3468401Z Setting up libmp3lame0:amd64 (3.100-3) ... 2021-05-18T14:11:46.3491428Z Setting up i965-va-driver:amd64 (2.4.0-0ubuntu1) ... 2021-05-18T14:11:46.3510093Z Setting up libvorbisenc2:amd64 (1.3.6-2ubuntu1) ... 2021-05-18T14:11:46.3563035Z Setting up libiec61883-0:amd64 (1.2.0-3) ... 2021-05-18T14:11:46.3621767Z Setting up libserd-0-0:amd64 (0.30.2-1) ... 2021-05-18T14:11:46.3662465Z Setting up libavc1394-0:amd64 (0.5.4-5) ... 2021-05-18T14:11:46.3698767Z Setting up mesa-vdpau-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-18T14:11:46.3741068Z Setting up libzvbi0:amd64 (0.2.35-17) ... 2021-05-18T14:11:46.3786095Z Setting up libcdio-cdda2:amd64 (10.2+2.0.0-1) ... 2021-05-18T14:11:46.3812868Z Setting up libcdio-paranoia2:amd64 (10.2+2.0.0-1) ... 2021-05-18T14:11:46.3836672Z Setting up libopenal1:amd64 (1:1.19.1-1) ... 2021-05-18T14:11:46.3862174Z Setting up libavutil56:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-18T14:11:46.3886421Z Setting up va-driver-all:amd64 (2.7.0-2) ... 2021-05-18T14:11:46.3908131Z Setting up libpostproc55:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-18T14:11:46.3931949Z Setting up librubberband2:amd64 (1.8.2-1build1) ... 2021-05-18T14:11:46.3959969Z Setting up libjack-jackd2-0:amd64 (1.9.12~dfsg-2ubuntu2) ... 2021-05-18T14:11:46.3988631Z Setting up vdpau-driver-all:amd64 (1.3-1ubuntu2) ... 2021-05-18T14:11:46.4015805Z Setting up libsord-0-0:amd64 (0.16.4-1) ... 2021-05-18T14:11:46.4057920Z Setting up libsratom-0-0:amd64 (0.6.4-1) ... 2021-05-18T14:11:46.4081638Z Setting up libswscale5:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-18T14:11:46.4101469Z Setting up libsndfile1:amd64 (1.0.28-7) ... 2021-05-18T14:11:46.4125351Z Setting up liblilv-0-0:amd64 (0.24.6-1ubuntu0.1) ... 2021-05-18T14:11:46.4175837Z Setting up libpulse0:amd64 (1:13.99.1-1ubuntu3.10) ... 2021-05-18T14:11:46.4265595Z Setting up libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-18T14:11:46.4291874Z Setting up libavresample4:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-18T14:11:46.4322275Z Setting up libavcodec58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-18T14:11:46.4353745Z Setting up libsdl2-2.0-0:amd64 (2.0.10+dfsg1-3) ... 2021-05-18T14:11:46.4398804Z Setting up libchromaprint1:amd64 (1.4.3-3build1) ... 2021-05-18T14:11:46.4424762Z Setting up libavformat58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-18T14:11:46.4445625Z Setting up libavfilter7:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-18T14:11:46.4465075Z Setting up libavdevice58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-18T14:11:46.4497254Z Setting up ffmpeg (7:4.2.4-1ubuntu0.1) ... 2021-05-18T14:11:46.4613848Z Processing triggers for man-db (2.9.1-1) ... 2021-05-18T14:11:47.4954408Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:11:49.6212814Z Reading package lists... 2021-05-18T14:11:49.7929117Z Building dependency tree... 2021-05-18T14:11:49.7947568Z Reading state information... 2021-05-18T14:11:49.9459327Z The following additional packages will be installed: 2021-05-18T14:11:49.9461976Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-05-18T14:11:49.9945312Z The following NEW packages will be installed: 2021-05-18T14:11:49.9947413Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-05-18T14:11:49.9950176Z libmagick++-dev 2021-05-18T14:11:50.0140750Z 0 upgraded, 4 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:11:50.0141687Z Need to get 309 kB of archives. 2021-05-18T14:11:50.0142751Z After this operation, 2202 kB of additional disk space will be used. 2021-05-18T14:11:50.0144999Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6-headers all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [47.5 kB] 2021-05-18T14:11:50.0166579Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-8 amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [133 kB] 2021-05-18T14:11:50.0192832Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-dev amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [127 kB] 2021-05-18T14:11:50.0223432Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-dev all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [1404 B] 2021-05-18T14:11:50.4217994Z Fetched 309 kB in 0s (13.3 MB/s) 2021-05-18T14:11:50.4531194Z Selecting previously unselected package libmagick++-6-headers. 2021-05-18T14:11:50.4606554Z (Reading database ... 2021-05-18T14:11:50.4607262Z (Reading database ... 5% 2021-05-18T14:11:50.4607860Z (Reading database ... 10% 2021-05-18T14:11:50.4608855Z (Reading database ... 15% 2021-05-18T14:11:50.4609494Z (Reading database ... 20% 2021-05-18T14:11:50.4610051Z (Reading database ... 25% 2021-05-18T14:11:50.4610616Z (Reading database ... 30% 2021-05-18T14:11:50.4611234Z (Reading database ... 35% 2021-05-18T14:11:50.4611787Z (Reading database ... 40% 2021-05-18T14:11:50.4612355Z (Reading database ... 45% 2021-05-18T14:11:50.4612926Z (Reading database ... 50% 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Preparing to unpack .../libmagick++-6.q16-8_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-05-18T14:11:50.6716702Z Unpacking libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-18T14:11:50.7067225Z Selecting previously unselected package libmagick++-6.q16-dev:amd64. 2021-05-18T14:11:50.7351909Z Preparing to unpack .../libmagick++-6.q16-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-05-18T14:11:50.7362254Z Unpacking libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-18T14:11:50.7920730Z Selecting previously unselected package libmagick++-dev. 2021-05-18T14:11:50.8155245Z Preparing to unpack .../libmagick++-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_all.deb ... 2021-05-18T14:11:50.8237837Z Unpacking libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-18T14:11:50.8794679Z Setting up libmagick++-6-headers (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-18T14:11:50.8878796Z Setting up libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-18T14:11:50.8906480Z Setting up libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-18T14:11:50.8935329Z Setting up libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-18T14:11:50.9025763Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:11:53.0443024Z Reading package lists... 2021-05-18T14:11:53.2178310Z Building dependency tree... 2021-05-18T14:11:53.2198321Z Reading state information... 2021-05-18T14:11:53.3807756Z imagemagick is already the newest version (8:6.9.10.23+dfsg-2.1ubuntu11.2). 2021-05-18T14:11:53.3809865Z The following additional packages will be installed: 2021-05-18T14:11:53.3811694Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 libgs9 libgs9-common 2021-05-18T14:11:53.3813121Z libijs-0.35 libjbig2dec0 2021-05-18T14:11:53.3817921Z Suggested packages: 2021-05-18T14:11:53.3819294Z fonts-noto fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre 2021-05-18T14:11:53.3820473Z ghostscript-x 2021-05-18T14:11:53.4303741Z The following NEW packages will be installed: 2021-05-18T14:11:53.4310079Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 ghostscript libgs9 2021-05-18T14:11:53.4322223Z libgs9-common libijs-0.35 libjbig2dec0 2021-05-18T14:11:53.4503195Z 0 upgraded, 8 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:11:53.4503960Z Need to get 11.2 MB of archives. 2021-05-18T14:11:53.4504697Z After this operation, 39.1 MB of additional disk space will be used. 2021-05-18T14:11:53.4506569Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-droid-fallback all 1:6.0.1r16-1.1 [1805 kB] 2021-05-18T14:11:53.4809057Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 fonts-noto-mono all 20200323-1build1~ubuntu20.04.1 [80.6 kB] 2021-05-18T14:11:53.4830999Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-urw-base35 all 20170801.1-3 [6333 kB] 2021-05-18T14:11:53.5910377Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9-common all 9.50~dfsg-5ubuntu4.2 [681 kB] 2021-05-18T14:11:53.6070653Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libijs-0.35 amd64 0.35-15 [15.7 kB] 2021-05-18T14:11:53.6072462Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjbig2dec0 amd64 0.18-1ubuntu1 [60.0 kB] 2021-05-18T14:11:53.6074144Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9 amd64 9.50~dfsg-5ubuntu4.2 [2172 kB] 2021-05-18T14:11:53.6342714Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 ghostscript amd64 9.50~dfsg-5ubuntu4.2 [51.6 kB] 2021-05-18T14:11:54.0405773Z Fetched 11.2 MB in 0s (56.7 MB/s) 2021-05-18T14:11:54.0737166Z Selecting previously unselected package fonts-droid-fallback. 2021-05-18T14:11:54.0815368Z (Reading database ... 2021-05-18T14:11:54.0815936Z (Reading database ... 5% 2021-05-18T14:11:54.0816434Z (Reading 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... 100% 2021-05-18T14:11:54.2081171Z (Reading database ... 267393 files and directories currently installed.) 2021-05-18T14:11:54.2210211Z Preparing to unpack .../0-fonts-droid-fallback_1%3a6.0.1r16-1.1_all.deb ... 2021-05-18T14:11:54.2431674Z Unpacking fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-05-18T14:11:54.4361996Z Selecting previously unselected package fonts-noto-mono. 2021-05-18T14:11:54.4609484Z Preparing to unpack .../1-fonts-noto-mono_20200323-1build1~ubuntu20.04.1_all.deb ... 2021-05-18T14:11:54.4618973Z Unpacking fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-05-18T14:11:54.5002003Z Selecting previously unselected package fonts-urw-base35. 2021-05-18T14:11:54.5226037Z Preparing to unpack .../2-fonts-urw-base35_20170801.1-3_all.deb ... 2021-05-18T14:11:54.5821585Z Unpacking fonts-urw-base35 (20170801.1-3) ... 2021-05-18T14:11:54.9522307Z Selecting previously unselected package libgs9-common. 2021-05-18T14:11:54.9794395Z Preparing to unpack .../3-libgs9-common_9.50~dfsg-5ubuntu4.2_all.deb ... 2021-05-18T14:11:54.9809629Z Unpacking libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-05-18T14:11:55.0802457Z Selecting previously unselected package libijs-0.35:amd64. 2021-05-18T14:11:55.1057599Z Preparing to unpack .../4-libijs-0.35_0.35-15_amd64.deb ... 2021-05-18T14:11:55.1074209Z Unpacking libijs-0.35:amd64 (0.35-15) ... 2021-05-18T14:11:55.1322663Z Selecting previously unselected package libjbig2dec0:amd64. 2021-05-18T14:11:55.1619077Z Preparing to unpack .../5-libjbig2dec0_0.18-1ubuntu1_amd64.deb ... 2021-05-18T14:11:55.1631137Z Unpacking libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-05-18T14:11:55.1948478Z Selecting previously unselected package libgs9:amd64. 2021-05-18T14:11:55.2241034Z Preparing to unpack .../6-libgs9_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-05-18T14:11:55.2261608Z Unpacking libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-05-18T14:11:55.4984019Z Selecting previously unselected package ghostscript. 2021-05-18T14:11:55.5273926Z Preparing to unpack .../7-ghostscript_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-05-18T14:11:55.5285540Z Unpacking ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-05-18T14:11:55.5956383Z Setting up fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-05-18T14:11:55.6005680Z Setting up libijs-0.35:amd64 (0.35-15) ... 2021-05-18T14:11:55.6038104Z Setting up fonts-urw-base35 (20170801.1-3) ... 2021-05-18T14:11:55.6641215Z Setting up libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-05-18T14:11:55.6677141Z Setting up fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-05-18T14:11:55.6918002Z Setting up libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-05-18T14:11:55.6951151Z Setting up libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-05-18T14:11:55.6982268Z Setting up ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-05-18T14:11:55.7093043Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-18T14:11:55.8061827Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:11:55.8270539Z Processing triggers for man-db (2.9.1-1) ... 2021-05-18T14:11:58.9688909Z Reading package lists... 2021-05-18T14:11:59.1526552Z Building dependency tree... 2021-05-18T14:11:59.1545474Z Reading state information... 2021-05-18T14:11:59.3167657Z The following additional packages will be installed: 2021-05-18T14:11:59.3169169Z libudunits2-0 libudunits2-data 2021-05-18T14:11:59.3637995Z The following NEW packages will be installed: 2021-05-18T14:11:59.3641470Z libudunits2-0 libudunits2-data libudunits2-dev 2021-05-18T14:11:59.3814230Z 0 upgraded, 3 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:11:59.3815586Z Need to get 429 kB of archives. 2021-05-18T14:11:59.3816692Z After this operation, 1026 kB of additional disk space will be used. 2021-05-18T14:11:59.3818630Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-data all 2.2.26-5 [18.8 kB] 2021-05-18T14:11:59.3833375Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-0 amd64 2.2.26-5 [48.9 kB] 2021-05-18T14:11:59.3844828Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-dev amd64 2.2.26-5 [362 kB] 2021-05-18T14:11:59.7926727Z Fetched 429 kB in 0s (20.2 MB/s) 2021-05-18T14:11:59.8233609Z Selecting previously unselected package libudunits2-data. 2021-05-18T14:11:59.8310797Z (Reading database ... 2021-05-18T14:11:59.8311673Z (Reading database ... 5% 2021-05-18T14:11:59.8312363Z (Reading database ... 10% 2021-05-18T14:11:59.8313003Z (Reading database ... 15% 2021-05-18T14:11:59.8313617Z (Reading database ... 20% 2021-05-18T14:11:59.8314234Z (Reading database ... 25% 2021-05-18T14:11:59.8314888Z (Reading database ... 30% 2021-05-18T14:11:59.8315494Z (Reading database ... 35% 2021-05-18T14:11:59.8316111Z (Reading database ... 40% 2021-05-18T14:11:59.8317002Z (Reading database ... 45% 2021-05-18T14:11:59.8317636Z (Reading database ... 50% 2021-05-18T14:11:59.8356415Z (Reading database ... 55% 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(2.2.26-5) ... 2021-05-18T14:12:00.0641853Z Selecting previously unselected package libudunits2-dev:amd64. 2021-05-18T14:12:00.0874917Z Preparing to unpack .../libudunits2-dev_2.2.26-5_amd64.deb ... 2021-05-18T14:12:00.0893211Z Unpacking libudunits2-dev:amd64 (2.2.26-5) ... 2021-05-18T14:12:00.1645556Z Setting up libudunits2-data (2.2.26-5) ... 2021-05-18T14:12:00.1681217Z Setting up libudunits2-0:amd64 (2.2.26-5) ... 2021-05-18T14:12:00.1712732Z Setting up libudunits2-dev:amd64 (2.2.26-5) ... 2021-05-18T14:12:00.1752858Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-18T14:12:00.2781839Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:12:02.4438996Z Reading package lists... 2021-05-18T14:12:02.6224739Z Building dependency tree... 2021-05-18T14:12:02.6243601Z Reading state information... 2021-05-18T14:12:02.8266348Z The following NEW packages will be installed: 2021-05-18T14:12:02.8271782Z libjq-dev 2021-05-18T14:12:02.8450248Z 0 upgraded, 1 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:12:02.8451153Z Need to get 11.2 kB of archives. 2021-05-18T14:12:02.8451876Z After this operation, 47.1 kB of additional disk space will be used. 2021-05-18T14:12:02.8453794Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libjq-dev amd64 1.6-1ubuntu0.20.04.1 [11.2 kB] 2021-05-18T14:12:03.2390643Z Fetched 11.2 kB in 0s (782 kB/s) 2021-05-18T14:12:03.2673047Z Selecting previously unselected package libjq-dev:amd64. 2021-05-18T14:12:03.2753352Z (Reading database ... 2021-05-18T14:12:03.2754061Z (Reading database ... 5% 2021-05-18T14:12:03.2754712Z (Reading database ... 10% 2021-05-18T14:12:03.2755375Z (Reading database ... 15% 2021-05-18T14:12:03.2756189Z (Reading database ... 20% 2021-05-18T14:12:03.2756820Z (Reading database ... 25% 2021-05-18T14:12:03.2757442Z (Reading database ... 30% 2021-05-18T14:12:03.2758053Z (Reading database ... 35% 2021-05-18T14:12:03.2758685Z (Reading database ... 40% 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(1.6-1ubuntu0.20.04.1) ... 2021-05-18T14:12:05.6104390Z Reading package lists... 2021-05-18T14:12:05.7948465Z Building dependency tree... 2021-05-18T14:12:05.7967983Z Reading state information... 2021-05-18T14:12:06.0041044Z The following NEW packages will be installed: 2021-05-18T14:12:06.0047617Z libmng2 2021-05-18T14:12:06.0227187Z 0 upgraded, 1 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:12:06.0228174Z Need to get 168 kB of archives. 2021-05-18T14:12:06.0228981Z After this operation, 571 kB of additional disk space will be used. 2021-05-18T14:12:06.0230887Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmng2 amd64 2.0.3+dfsg-3 [168 kB] 2021-05-18T14:12:06.4382777Z Fetched 168 kB in 0s (10.1 MB/s) 2021-05-18T14:12:06.4687977Z Selecting previously unselected package libmng2:amd64. 2021-05-18T14:12:06.4767030Z (Reading database ... 2021-05-18T14:12:06.4767754Z (Reading database ... 5% 2021-05-18T14:12:06.4768327Z (Reading database ... 10% 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2021-05-18T14:12:06.6035171Z (Reading database ... 267992 files and directories currently installed.) 2021-05-18T14:12:06.6173602Z Preparing to unpack .../libmng2_2.0.3+dfsg-3_amd64.deb ... 2021-05-18T14:12:06.6189380Z Unpacking libmng2:amd64 (2.0.3+dfsg-3) ... 2021-05-18T14:12:06.6903341Z Setting up libmng2:amd64 (2.0.3+dfsg-3) ... 2021-05-18T14:12:06.6936652Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:12:08.8598194Z Reading package lists... 2021-05-18T14:12:09.0384064Z Building dependency tree... 2021-05-18T14:12:09.0403177Z Reading state information... 2021-05-18T14:12:09.2335268Z E: Unable to locate package libmng1 2021-05-18T14:12:09.2954677Z Reading package lists... 2021-05-18T14:12:09.4732495Z Building dependency tree... 2021-05-18T14:12:09.4752025Z Reading state information... 2021-05-18T14:12:09.5938950Z E: Unable to locate package libapparmor-devel 2021-05-18T14:12:09.6550250Z Reading package lists... 2021-05-18T14:12:09.8274810Z Building dependency tree... 2021-05-18T14:12:09.8294108Z Reading state information... 2021-05-18T14:12:09.9885568Z The following additional packages will be installed: 2021-05-18T14:12:09.9888674Z libij-java 2021-05-18T14:12:10.0345562Z The following NEW packages will be installed: 2021-05-18T14:12:10.0354533Z imagej libij-java 2021-05-18T14:12:10.0532096Z 0 upgraded, 2 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:12:10.0533218Z Need to get 2328 kB of archives. 2021-05-18T14:12:10.0534454Z After this operation, 2498 kB of additional disk space will be used. 2021-05-18T14:12:10.0536669Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libij-java all 1.52r-1 [2284 kB] 2021-05-18T14:12:10.0947453Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 imagej all 1.52r-1 [43.7 kB] 2021-05-18T14:12:10.5048096Z Fetched 2328 kB in 0s (42.0 MB/s) 2021-05-18T14:12:10.5350401Z Selecting previously unselected package libij-java. 2021-05-18T14:12:10.5428761Z (Reading 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lists... 2021-05-18T14:12:14.1761408Z Building dependency tree... 2021-05-18T14:12:14.1780795Z Reading state information... 2021-05-18T14:12:14.3386337Z Suggested packages: 2021-05-18T14:12:14.3388106Z bowtie2-examples 2021-05-18T14:12:14.3846638Z The following NEW packages will be installed: 2021-05-18T14:12:14.3858466Z bowtie2 2021-05-18T14:12:14.4065439Z 0 upgraded, 1 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:12:14.4066188Z Need to get 1324 kB of archives. 2021-05-18T14:12:14.4066891Z After this operation, 5630 kB of additional disk space will be used. 2021-05-18T14:12:14.4069150Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 bowtie2 amd64 2.3.5.1-6build1 [1324 kB] 2021-05-18T14:12:14.8288022Z Fetched 1324 kB in 0s (34.0 MB/s) 2021-05-18T14:12:14.8564786Z Selecting previously unselected package bowtie2. 2021-05-18T14:12:14.8641116Z (Reading database ... 2021-05-18T14:12:14.8641817Z (Reading database ... 5% 2021-05-18T14:12:14.8642663Z 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package. 2021-05-18T14:12:18.9024063Z This may mean that the package is missing, has been obsoleted, or 2021-05-18T14:12:18.9024854Z is only available from another source 2021-05-18T14:12:18.9025249Z 2021-05-18T14:12:18.9988140Z E: Package 'insighttoolkit4-python' has no installation candidate 2021-05-18T14:12:19.0604831Z Reading package lists... 2021-05-18T14:12:19.2469244Z Building dependency tree... 2021-05-18T14:12:19.2488523Z Reading state information... 2021-05-18T14:12:19.2790428Z Package libav-tools is not available, but is referred to by another package. 2021-05-18T14:12:19.2792281Z This may mean that the package is missing, has been obsoleted, or 2021-05-18T14:12:19.2793303Z is only available from another source 2021-05-18T14:12:19.2794235Z However the following packages replace it: 2021-05-18T14:12:19.2794988Z ffmpeg 2021-05-18T14:12:19.2795428Z 2021-05-18T14:12:19.3775536Z E: Package 'libav-tools' has no installation candidate 2021-05-18T14:12:19.4391384Z Reading package lists... 2021-05-18T14:12:19.6297114Z Building dependency tree... 2021-05-18T14:12:19.6317656Z Reading state information... 2021-05-18T14:12:19.7919925Z The following additional packages will be installed: 2021-05-18T14:12:19.7922289Z libgcrypt20-dev libgit2-28 libgpg-error-dev libhttp-parser-dev 2021-05-18T14:12:19.7924176Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-05-18T14:12:19.7925405Z libssh2-1-dev 2021-05-18T14:12:19.7930712Z Suggested packages: 2021-05-18T14:12:19.7931765Z libgcrypt20-doc libmbedtls-doc 2021-05-18T14:12:19.8421720Z The following NEW packages will be installed: 2021-05-18T14:12:19.8423976Z libgcrypt20-dev libgit2-28 libgit2-dev libgpg-error-dev libhttp-parser-dev 2021-05-18T14:12:19.8426640Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-05-18T14:12:19.8432515Z libssh2-1-dev 2021-05-18T14:12:19.8616863Z 0 upgraded, 11 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:12:19.8617621Z Need to get 2667 kB of archives. 2021-05-18T14:12:19.8618606Z After this operation, 11.2 MB of additional disk space will be used. 2021-05-18T14:12:19.8620542Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgpg-error-dev amd64 1.37-1 [109 kB] 2021-05-18T14:12:19.8657811Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcrypt20-dev amd64 1.8.5-5ubuntu1 [470 kB] 2021-05-18T14:12:19.8712081Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser2.9 amd64 2.9.2-2 [21.8 kB] 2021-05-18T14:12:19.8717277Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedcrypto3 amd64 2.16.4-1ubuntu2 [150 kB] 2021-05-18T14:12:19.8731236Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedx509-0 amd64 2.16.4-1ubuntu2 [42.3 kB] 2021-05-18T14:12:19.8737134Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls12 amd64 2.16.4-1ubuntu2 [71.8 kB] 2021-05-18T14:12:19.8745566Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-28 amd64 0.28.4+dfsg.1-2 [403 kB] 2021-05-18T14:12:19.8780596Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls-dev amd64 2.16.4-1ubuntu2 [444 kB] 2021-05-18T14:12:19.8830454Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libssh2-1-dev amd64 1.8.0-2.1build1 [244 kB] 2021-05-18T14:12:19.8859707Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser-dev amd64 2.9.2-2 [20.2 kB] 2021-05-18T14:12:19.8864680Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-dev amd64 0.28.4+dfsg.1-2 [691 kB] 2021-05-18T14:12:20.2994375Z Fetched 2667 kB in 0s (61.2 MB/s) 2021-05-18T14:12:20.3281620Z Selecting previously unselected package libgpg-error-dev. 2021-05-18T14:12:20.3357929Z (Reading database ... 2021-05-18T14:12:20.3358747Z (Reading database ... 5% 2021-05-18T14:12:20.3359810Z (Reading database 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2021-05-18T14:12:20.4551213Z (Reading database ... 268047 files and directories currently installed.) 2021-05-18T14:12:20.4680787Z Preparing to unpack .../00-libgpg-error-dev_1.37-1_amd64.deb ... 2021-05-18T14:12:20.4695586Z Unpacking libgpg-error-dev (1.37-1) ... 2021-05-18T14:12:20.5122443Z Selecting previously unselected package libgcrypt20-dev. 2021-05-18T14:12:20.5348344Z Preparing to unpack .../01-libgcrypt20-dev_1.8.5-5ubuntu1_amd64.deb ... 2021-05-18T14:12:20.5359809Z Unpacking libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-05-18T14:12:20.6161552Z Selecting previously unselected package libhttp-parser2.9:amd64. 2021-05-18T14:12:20.6395494Z Preparing to unpack .../02-libhttp-parser2.9_2.9.2-2_amd64.deb ... 2021-05-18T14:12:20.6424253Z Unpacking libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-05-18T14:12:20.6761539Z Selecting previously unselected package libmbedcrypto3:amd64. 2021-05-18T14:12:20.7002715Z Preparing to unpack .../03-libmbedcrypto3_2.16.4-1ubuntu2_amd64.deb ... 2021-05-18T14:12:20.7018273Z Unpacking libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-05-18T14:12:20.7442060Z Selecting previously unselected package libmbedx509-0:amd64. 2021-05-18T14:12:20.7684653Z Preparing to unpack .../04-libmbedx509-0_2.16.4-1ubuntu2_amd64.deb ... 2021-05-18T14:12:20.7699744Z Unpacking libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-05-18T14:12:20.8041595Z Selecting previously unselected package libmbedtls12:amd64. 2021-05-18T14:12:21.4552382Z Preparing to unpack .../05-libmbedtls12_2.16.4-1ubuntu2_amd64.deb ... 2021-05-18T14:12:21.4561947Z Unpacking libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-05-18T14:12:21.4563495Z Selecting previously unselected package libgit2-28:amd64. 2021-05-18T14:12:21.4565153Z Preparing to unpack .../06-libgit2-28_0.28.4+dfsg.1-2_amd64.deb ... 2021-05-18T14:12:21.4566378Z Unpacking libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-05-18T14:12:21.4567684Z Selecting previously unselected package libmbedtls-dev:amd64. 2021-05-18T14:12:21.4569130Z Preparing to unpack .../07-libmbedtls-dev_2.16.4-1ubuntu2_amd64.deb ... 2021-05-18T14:12:21.4570394Z Unpacking libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-05-18T14:12:21.4571715Z Selecting previously unselected package libssh2-1-dev:amd64. 2021-05-18T14:12:21.4573442Z Preparing to unpack .../08-libssh2-1-dev_1.8.0-2.1build1_amd64.deb ... 2021-05-18T14:12:21.4575099Z Unpacking libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-05-18T14:12:21.4576245Z Selecting previously unselected package libhttp-parser-dev. 2021-05-18T14:12:21.4577446Z Preparing to unpack .../09-libhttp-parser-dev_2.9.2-2_amd64.deb ... 2021-05-18T14:12:21.4578478Z Unpacking libhttp-parser-dev (2.9.2-2) ... 2021-05-18T14:12:21.4579526Z Selecting previously unselected package libgit2-dev:amd64. 2021-05-18T14:12:21.4580646Z Preparing to unpack .../10-libgit2-dev_0.28.4+dfsg.1-2_amd64.deb ... 2021-05-18T14:12:21.4581628Z Unpacking libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-05-18T14:12:21.4582520Z Setting up libgpg-error-dev (1.37-1) ... 2021-05-18T14:12:21.4583460Z Setting up libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-05-18T14:12:21.4584429Z Setting up libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-05-18T14:12:21.4585356Z Setting up libhttp-parser-dev (2.9.2-2) ... 2021-05-18T14:12:21.4586325Z Setting up libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-05-18T14:12:21.4587266Z Setting up libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-05-18T14:12:21.4588228Z Setting up libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-05-18T14:12:21.4589176Z Setting up libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-05-18T14:12:21.4590098Z Setting up libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-05-18T14:12:21.4590989Z Setting up libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-05-18T14:12:21.4591887Z Setting up libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-05-18T14:12:21.4592760Z Processing triggers for man-db (2.9.1-1) ... 2021-05-18T14:12:26.1321677Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-18T14:12:26.2362574Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:12:28.4641544Z Reading package lists... 2021-05-18T14:12:28.6488855Z Building dependency tree... 2021-05-18T14:12:28.6509454Z Reading state information... 2021-05-18T14:12:28.9362860Z libtiff-dev is already the newest version (4.1.0+git191117-2ubuntu0.20.04.1). 2021-05-18T14:12:28.9364467Z libtiff-dev set to manually installed. 2021-05-18T14:12:28.9365472Z 0 upgraded, 0 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:12:28.9987700Z Reading package lists... 2021-05-18T14:12:29.1907285Z Building dependency tree... 2021-05-18T14:12:29.1928573Z Reading state information... 2021-05-18T14:12:29.4328964Z unixodbc-dev is already the newest version (2.3.7). 2021-05-18T14:12:29.4330152Z 0 upgraded, 0 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:12:29.4942882Z Reading package lists... 2021-05-18T14:12:29.6728708Z Building dependency tree... 2021-05-18T14:12:29.6748970Z Reading state information... 2021-05-18T14:12:29.8798124Z The following NEW packages will be installed: 2021-05-18T14:12:29.8802617Z libsodium-dev 2021-05-18T14:12:29.9009110Z 0 upgraded, 1 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:12:29.9009893Z Need to get 169 kB of archives. 2021-05-18T14:12:29.9010837Z After this operation, 826 kB of additional disk space will be used. 2021-05-18T14:12:29.9012631Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsodium-dev amd64 1.0.18-1 [169 kB] 2021-05-18T14:12:30.3061034Z Fetched 169 kB in 0s (8220 kB/s) 2021-05-18T14:12:30.3359034Z Selecting previously unselected package libsodium-dev:amd64. 2021-05-18T14:12:30.3441116Z (Reading database ... 2021-05-18T14:12:30.3441701Z (Reading database ... 5% 2021-05-18T14:12:30.3442170Z (Reading database ... 10% 2021-05-18T14:12:30.3442651Z (Reading database ... 15% 2021-05-18T14:12:30.3443129Z (Reading database ... 20% 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2021-05-18T14:12:30.4852481Z Preparing to unpack .../libsodium-dev_1.0.18-1_amd64.deb ... 2021-05-18T14:12:30.4864792Z Unpacking libsodium-dev:amd64 (1.0.18-1) ... 2021-05-18T14:12:30.5612124Z Setting up libsodium-dev:amd64 (1.0.18-1) ... 2021-05-18T14:12:32.6954228Z Reading package lists... 2021-05-18T14:12:32.8692736Z Building dependency tree... 2021-05-18T14:12:32.8710733Z Reading state information... 2021-05-18T14:12:33.0207496Z The following additional packages will be installed: 2021-05-18T14:12:33.0212283Z libarchive-dev liblept5 libtesseract4 tesseract-ocr tesseract-ocr-osd 2021-05-18T14:12:33.0681679Z The following NEW packages will be installed: 2021-05-18T14:12:33.0690074Z libarchive-dev liblept5 libleptonica-dev libtesseract-dev libtesseract4 2021-05-18T14:12:33.0691521Z tesseract-ocr tesseract-ocr-eng tesseract-ocr-osd 2021-05-18T14:12:33.0972969Z 0 upgraded, 8 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:12:33.0974037Z Need to get 10.4 MB of archives. 2021-05-18T14:12:33.0974951Z After this operation, 38.0 MB of additional disk space will be used. 2021-05-18T14:12:33.0976941Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-dev amd64 3.4.0-2ubuntu1 [490 kB] 2021-05-18T14:12:33.1087351Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblept5 amd64 1.79.0-1 [999 kB] 2021-05-18T14:12:33.1302397Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libleptonica-dev amd64 1.79.0-1 [1389 kB] 2021-05-18T14:12:33.1552190Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract4 amd64 4.1.1-2build2 [1237 kB] 2021-05-18T14:12:33.1772294Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract-dev amd64 4.1.1-2build2 [1463 kB] 2021-05-18T14:12:33.2025837Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-eng all 1:4.00~git30-7274cfa-1 [1598 kB] 2021-05-18T14:12:33.2293271Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-osd all 1:4.00~git30-7274cfa-1 [2990 kB] 2021-05-18T14:12:33.2807257Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr amd64 4.1.1-2build2 [262 kB] 2021-05-18T14:12:33.6925229Z Fetched 10.4 MB in 0s (49.5 MB/s) 2021-05-18T14:12:33.7218013Z Selecting previously unselected package libarchive-dev:amd64. 2021-05-18T14:12:33.7295739Z (Reading database ... 2021-05-18T14:12:33.7296806Z (Reading database ... 5% 2021-05-18T14:12:33.7297660Z (Reading database ... 10% 2021-05-18T14:12:33.7298188Z (Reading database ... 15% 2021-05-18T14:12:33.7298657Z (Reading database ... 20% 2021-05-18T14:12:33.7299198Z (Reading database ... 25% 2021-05-18T14:12:33.7299677Z (Reading database ... 30% 2021-05-18T14:12:33.7300141Z (Reading database ... 35% 2021-05-18T14:12:33.7300613Z (Reading database ... 40% 2021-05-18T14:12:33.7301082Z (Reading database ... 45% 2021-05-18T14:12:33.7301557Z (Reading database 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.../1-liblept5_1.79.0-1_amd64.deb ... 2021-05-18T14:12:33.9706830Z Unpacking liblept5:amd64 (1.79.0-1) ... 2021-05-18T14:12:34.0841673Z Selecting previously unselected package libleptonica-dev:amd64. 2021-05-18T14:12:34.1079244Z Preparing to unpack .../2-libleptonica-dev_1.79.0-1_amd64.deb ... 2021-05-18T14:12:34.1093489Z Unpacking libleptonica-dev:amd64 (1.79.0-1) ... 2021-05-18T14:12:34.2521273Z Selecting previously unselected package libtesseract4:amd64. 2021-05-18T14:12:34.2772302Z Preparing to unpack .../3-libtesseract4_4.1.1-2build2_amd64.deb ... 2021-05-18T14:12:34.2782908Z Unpacking libtesseract4:amd64 (4.1.1-2build2) ... 2021-05-18T14:12:34.4122130Z Selecting previously unselected package libtesseract-dev:amd64. 2021-05-18T14:12:34.4356727Z Preparing to unpack .../4-libtesseract-dev_4.1.1-2build2_amd64.deb ... 2021-05-18T14:12:34.4369234Z Unpacking libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-05-18T14:12:34.6041991Z Selecting previously unselected package tesseract-ocr-eng. 2021-05-18T14:12:34.6272982Z Preparing to unpack .../5-tesseract-ocr-eng_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-05-18T14:12:34.6284562Z Unpacking tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-05-18T14:12:34.7842666Z Selecting previously unselected package tesseract-ocr-osd. 2021-05-18T14:12:34.8139120Z Preparing to unpack .../6-tesseract-ocr-osd_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-05-18T14:12:34.8149828Z Unpacking tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-05-18T14:12:35.1466939Z Selecting previously unselected package tesseract-ocr. 2021-05-18T14:12:35.1766013Z Preparing to unpack .../7-tesseract-ocr_4.1.1-2build2_amd64.deb ... 2021-05-18T14:12:35.1775831Z Unpacking tesseract-ocr (4.1.1-2build2) ... 2021-05-18T14:12:35.2608871Z Setting up tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-05-18T14:12:35.2638094Z Setting up liblept5:amd64 (1.79.0-1) ... 2021-05-18T14:12:35.2670771Z Setting up libleptonica-dev:amd64 (1.79.0-1) ... 2021-05-18T14:12:35.2705650Z Setting up libtesseract4:amd64 (4.1.1-2build2) ... 2021-05-18T14:12:35.2731868Z Setting up libarchive-dev:amd64 (3.4.0-2ubuntu1) ... 2021-05-18T14:12:35.2753706Z Setting up tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-05-18T14:12:35.2779975Z Setting up libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-05-18T14:12:35.2810250Z Setting up tesseract-ocr (4.1.1-2build2) ... 2021-05-18T14:12:35.2848094Z Processing triggers for man-db (2.9.1-1) ... 2021-05-18T14:12:38.1169538Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:12:40.2734872Z Reading package lists... 2021-05-18T14:12:40.4533074Z Building dependency tree... 2021-05-18T14:12:40.4552917Z Reading state information... 2021-05-18T14:12:40.6867583Z wget is already the newest version (1.20.3-1ubuntu1). 2021-05-18T14:12:40.6868854Z 0 upgraded, 0 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:12:40.7477434Z Reading package lists... 2021-05-18T14:12:40.9226160Z Building dependency tree... 2021-05-18T14:12:40.9244310Z Reading state information... 2021-05-18T14:12:41.0762458Z The following additional packages will be installed: 2021-05-18T14:12:41.0764318Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-05-18T14:12:41.0766777Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev 2021-05-18T14:12:41.0773289Z Suggested packages: 2021-05-18T14:12:41.0774186Z doc-base krb5-doc krb5-user libnorm-doc 2021-05-18T14:12:41.1267628Z The following NEW packages will be installed: 2021-05-18T14:12:41.1271589Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-05-18T14:12:41.1278852Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev libzmq3-dev 2021-05-18T14:12:41.1484596Z 0 upgraded, 10 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:12:41.1485615Z Need to get 1459 kB of archives. 2021-05-18T14:12:41.1486325Z After this operation, 7754 kB of additional disk space will be used. 2021-05-18T14:12:41.1488726Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgssrpc4 amd64 1.17-6ubuntu4.1 [55.4 kB] 2021-05-18T14:12:41.1517199Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkdb5-9 amd64 1.17-6ubuntu4.1 [37.3 kB] 2021-05-18T14:12:41.1523349Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5srv-mit11 amd64 1.17-6ubuntu4.1 [49.5 kB] 2021-05-18T14:12:41.1529546Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5clnt-mit11 amd64 1.17-6ubuntu4.1 [37.6 kB] 2021-05-18T14:12:41.1535709Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 comerr-dev amd64 2.1-1.45.5-2ubuntu1 [39.9 kB] 2021-05-18T14:12:41.1540862Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 krb5-multidev amd64 1.17-6ubuntu4.1 [120 kB] 2021-05-18T14:12:41.1554489Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnorm-dev amd64 1.5.8+dfsg2-2build1 [463 kB] 2021-05-18T14:12:41.1698816Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpgm-dev amd64 5.2.122~dfsg-3ubuntu1 [189 kB] 2021-05-18T14:12:41.1715022Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkrb5-dev amd64 1.17-6ubuntu4.1 [11.7 kB] 2021-05-18T14:12:41.1720521Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzmq3-dev amd64 4.3.2-2ubuntu1 [455 kB] 2021-05-18T14:12:41.5864917Z Fetched 1459 kB in 0s (33.3 MB/s) 2021-05-18T14:12:41.6173890Z Selecting previously unselected package libgssrpc4:amd64. 2021-05-18T14:12:41.6251989Z (Reading database ... 2021-05-18T14:12:41.6252938Z (Reading database ... 5% 2021-05-18T14:12:41.6253464Z (Reading database ... 10% 2021-05-18T14:12:41.6253966Z (Reading database ... 15% 2021-05-18T14:12:41.6254496Z (Reading database ... 20% 2021-05-18T14:12:41.6254974Z (Reading database ... 25% 2021-05-18T14:12:41.6255457Z (Reading database ... 30% 2021-05-18T14:12:41.6255927Z (Reading database ... 35% 2021-05-18T14:12:41.6256387Z (Reading database ... 40% 2021-05-18T14:12:41.6256858Z (Reading database ... 45% 2021-05-18T14:12:41.6257330Z (Reading database ... 50% 2021-05-18T14:12:41.6287590Z (Reading database ... 55% 2021-05-18T14:12:41.6334152Z (Reading database ... 60% 2021-05-18T14:12:41.6367355Z (Reading database ... 65% 2021-05-18T14:12:41.6496665Z (Reading database ... 70% 2021-05-18T14:12:41.6618784Z (Reading database ... 75% 2021-05-18T14:12:41.6646032Z (Reading database ... 80% 2021-05-18T14:12:41.7058462Z (Reading database ... 85% 2021-05-18T14:12:41.7377293Z (Reading database ... 90% 2021-05-18T14:12:41.7457162Z (Reading database ... 95% 2021-05-18T14:12:41.7458022Z (Reading database ... 100% 2021-05-18T14:12:41.7459300Z (Reading database ... 268845 files and directories currently installed.) 2021-05-18T14:12:41.7588528Z Preparing to unpack .../0-libgssrpc4_1.17-6ubuntu4.1_amd64.deb ... 2021-05-18T14:12:41.7608048Z Unpacking libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-05-18T14:12:41.7961691Z Selecting previously unselected package libkdb5-9:amd64. 2021-05-18T14:12:41.8193910Z Preparing to unpack .../1-libkdb5-9_1.17-6ubuntu4.1_amd64.deb ... 2021-05-18T14:12:41.8207571Z Unpacking libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-05-18T14:12:41.8522264Z Selecting previously unselected package libkadm5srv-mit11:amd64. 2021-05-18T14:12:41.8770408Z Preparing to unpack .../2-libkadm5srv-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-05-18T14:12:41.8782985Z Unpacking libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-18T14:12:41.9068239Z Selecting previously unselected package libkadm5clnt-mit11:amd64. 2021-05-18T14:12:41.9355869Z Preparing to unpack .../3-libkadm5clnt-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-05-18T14:12:41.9368332Z Unpacking libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-18T14:12:41.9681658Z Selecting previously unselected package comerr-dev:amd64. 2021-05-18T14:12:41.9938293Z Preparing to unpack .../4-comerr-dev_2.1-1.45.5-2ubuntu1_amd64.deb ... 2021-05-18T14:12:41.9970918Z Unpacking comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-05-18T14:12:42.0322856Z Selecting previously unselected package krb5-multidev:amd64. 2021-05-18T14:12:42.0561466Z Preparing to unpack .../5-krb5-multidev_1.17-6ubuntu4.1_amd64.deb ... 2021-05-18T14:12:42.0573977Z Unpacking krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-05-18T14:12:42.0962942Z Selecting previously unselected package libnorm-dev:amd64. 2021-05-18T14:12:42.1231158Z Preparing to unpack .../6-libnorm-dev_1.5.8+dfsg2-2build1_amd64.deb ... 2021-05-18T14:12:42.1244216Z Unpacking libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-05-18T14:12:42.2002010Z Selecting previously unselected package libpgm-dev:amd64. 2021-05-18T14:12:42.2209408Z Preparing to unpack .../7-libpgm-dev_5.2.122~dfsg-3ubuntu1_amd64.deb ... 2021-05-18T14:12:42.2226881Z Unpacking libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-05-18T14:12:42.2721510Z Selecting previously unselected package libkrb5-dev:amd64. 2021-05-18T14:12:42.2953089Z Preparing to unpack .../8-libkrb5-dev_1.17-6ubuntu4.1_amd64.deb ... 2021-05-18T14:12:42.2964874Z Unpacking libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-05-18T14:12:42.3282083Z Selecting previously unselected package libzmq3-dev:amd64. 2021-05-18T14:12:42.3523364Z Preparing to unpack .../9-libzmq3-dev_4.3.2-2ubuntu1_amd64.deb ... 2021-05-18T14:12:42.3534360Z Unpacking libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-05-18T14:12:42.4546926Z Setting up libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-05-18T14:12:42.4581373Z Setting up libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-05-18T14:12:42.4617232Z Setting up libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-05-18T14:12:42.4647704Z Setting up comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-05-18T14:12:42.4689619Z Setting up libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-05-18T14:12:42.4718028Z Setting up libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-18T14:12:42.4742906Z Setting up libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-18T14:12:42.4764292Z Setting up krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-05-18T14:12:42.4793089Z Setting up libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-05-18T14:12:42.4815339Z Setting up libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-05-18T14:12:42.4852176Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:12:42.5050171Z Processing triggers for man-db (2.9.1-1) ... 2021-05-18T14:12:45.5489668Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-18T14:12:47.8113974Z Reading package lists... 2021-05-18T14:12:47.9850532Z Building dependency tree... 2021-05-18T14:12:47.9870503Z Reading state information... 2021-05-18T14:12:48.1413653Z E: Unable to locate package udunits 2021-05-18T14:12:48.2041636Z Reading package lists... 2021-05-18T14:12:48.3747107Z Building dependency tree... 2021-05-18T14:12:48.3765735Z Reading state information... 2021-05-18T14:12:48.5260536Z The following additional packages will be installed: 2021-05-18T14:12:48.5263078Z libwebpdemux2 2021-05-18T14:12:48.5727520Z The following NEW packages will be installed: 2021-05-18T14:12:48.5731537Z libwebp-dev libwebpdemux2 2021-05-18T14:12:48.5918505Z 0 upgraded, 2 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:12:48.5919675Z Need to get 277 kB of archives. 2021-05-18T14:12:48.5920841Z After this operation, 965 kB of additional disk space will be used. 2021-05-18T14:12:48.5922654Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwebpdemux2 amd64 0.6.1-2 [9472 B] 2021-05-18T14:12:48.5937786Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwebp-dev amd64 0.6.1-2 [267 kB] 2021-05-18T14:12:49.0007599Z Fetched 277 kB in 0s (13.4 MB/s) 2021-05-18T14:12:49.0316456Z Selecting previously unselected package libwebpdemux2:amd64. 2021-05-18T14:12:49.0395778Z (Reading database ... 2021-05-18T14:12:49.0396723Z (Reading database ... 5% 2021-05-18T14:12:49.0397403Z (Reading 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... 100% 2021-05-18T14:12:49.1708826Z (Reading database ... 269145 files and directories currently installed.) 2021-05-18T14:12:49.1849807Z Preparing to unpack .../libwebpdemux2_0.6.1-2_amd64.deb ... 2021-05-18T14:12:49.1874505Z Unpacking libwebpdemux2:amd64 (0.6.1-2) ... 2021-05-18T14:12:49.2201842Z Selecting previously unselected package libwebp-dev:amd64. 2021-05-18T14:12:49.2445604Z Preparing to unpack .../libwebp-dev_0.6.1-2_amd64.deb ... 2021-05-18T14:12:49.2455066Z Unpacking libwebp-dev:amd64 (0.6.1-2) ... 2021-05-18T14:12:49.3319321Z Setting up libwebpdemux2:amd64 (0.6.1-2) ... 2021-05-18T14:12:49.3348424Z Setting up libwebp-dev:amd64 (0.6.1-2) ... 2021-05-18T14:12:49.3378989Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:12:51.5653586Z Reading package lists... 2021-05-18T14:12:51.7547912Z Building dependency tree... 2021-05-18T14:12:51.7568097Z Reading state information... 2021-05-18T14:12:51.9261687Z The following additional packages will be installed: 2021-05-18T14:12:51.9264752Z gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-05-18T14:12:51.9266654Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-05-18T14:12:51.9268247Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-05-18T14:12:51.9273783Z Suggested packages: 2021-05-18T14:12:51.9274933Z cargo-doc gdb-doc gdbserver rust-doc rust-src 2021-05-18T14:12:51.9275837Z Recommended packages: 2021-05-18T14:12:51.9276505Z cargo 2021-05-18T14:12:51.9805125Z The following NEW packages will be installed: 2021-05-18T14:12:51.9813573Z cargo gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-05-18T14:12:51.9815166Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-05-18T14:12:51.9818447Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-05-18T14:12:52.0054946Z 0 upgraded, 13 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:12:52.0055699Z Need to get 108 MB of archives. 2021-05-18T14:12:52.0057075Z After this operation, 501 MB of additional disk space will be used. 2021-05-18T14:12:52.0059084Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libbabeltrace1 amd64 1.5.8-1build1 [156 kB] 2021-05-18T14:12:52.0097603Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libipt2 amd64 2.0.1-1 [42.8 kB] 2021-05-18T14:12:52.0109473Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight-common all 3.1.8-1.2build5 [50.7 kB] 2021-05-18T14:12:52.0125814Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libboost-regex1.71.0 amd64 1.71.0-6ubuntu6 [471 kB] 2021-05-18T14:12:52.0209094Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight4v5 amd64 3.1.8-1.2build5 [232 kB] 2021-05-18T14:12:52.0246029Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxxhash0 amd64 0.7.3-1 [15.3 kB] 2021-05-18T14:12:52.0255553Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-1.47 amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [59.6 MB] 2021-05-18T14:12:52.1606378Z Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal/main amd64 gdb amd64 10.2-0ubuntu1~20.04~1 [3282 kB] 2021-05-18T14:12:53.0772405Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-dev amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [28.5 MB] 2021-05-18T14:12:53.5918783Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rustc amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [1921 kB] 2021-05-18T14:12:53.6251775Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 cargo amd64 0.47.0-1~exp1ubuntu1~20.04.1 [3147 kB] 2021-05-18T14:12:53.6804403Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libc6-dbg amd64 2.31-0ubuntu9.2 [10.5 MB] 2021-05-18T14:12:53.8789356Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rust-gdb all 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [27.5 kB] 2021-05-18T14:12:54.3103219Z Fetched 108 MB in 2s (57.0 MB/s) 2021-05-18T14:12:54.3420755Z Selecting previously unselected package libbabeltrace1:amd64. 2021-05-18T14:12:54.3502123Z (Reading database ... 2021-05-18T14:12:54.3502988Z (Reading database ... 5% 2021-05-18T14:12:54.3503637Z (Reading database ... 10% 2021-05-18T14:12:54.3504548Z (Reading database ... 15% 2021-05-18T14:12:54.3505056Z (Reading database ... 20% 2021-05-18T14:12:54.3505531Z (Reading database ... 25% 2021-05-18T14:12:54.3506060Z (Reading database ... 30% 2021-05-18T14:12:54.3506518Z (Reading database ... 35% 2021-05-18T14:12:54.3506985Z (Reading database ... 40% 2021-05-18T14:12:54.3507435Z (Reading database ... 45% 2021-05-18T14:12:54.3507895Z (Reading database ... 50% 2021-05-18T14:12:54.3550832Z (Reading database ... 55% 2021-05-18T14:12:54.3595630Z (Reading database ... 60% 2021-05-18T14:12:54.3627881Z (Reading database ... 65% 2021-05-18T14:12:54.3765709Z (Reading database ... 70% 2021-05-18T14:12:54.3898767Z (Reading database ... 75% 2021-05-18T14:12:54.3926171Z (Reading database ... 80% 2021-05-18T14:12:54.4361828Z (Reading database ... 85% 2021-05-18T14:12:54.4713853Z (Reading database ... 90% 2021-05-18T14:12:54.4803535Z (Reading database ... 95% 2021-05-18T14:12:54.4804675Z (Reading database ... 100% 2021-05-18T14:12:54.4805706Z (Reading database ... 269173 files and directories currently installed.) 2021-05-18T14:12:54.4950391Z Preparing to unpack .../00-libbabeltrace1_1.5.8-1build1_amd64.deb ... 2021-05-18T14:12:54.4968023Z Unpacking libbabeltrace1:amd64 (1.5.8-1build1) ... 2021-05-18T14:12:54.5441018Z Selecting previously unselected package libipt2. 2021-05-18T14:12:54.5668205Z Preparing to unpack .../01-libipt2_2.0.1-1_amd64.deb ... 2021-05-18T14:12:54.5677467Z Unpacking libipt2 (2.0.1-1) ... 2021-05-18T14:12:54.5940937Z Selecting previously unselected package libsource-highlight-common. 2021-05-18T14:12:54.6241687Z Preparing to unpack .../02-libsource-highlight-common_3.1.8-1.2build5_all.deb ... 2021-05-18T14:12:54.6250926Z Unpacking libsource-highlight-common (3.1.8-1.2build5) ... 2021-05-18T14:12:54.6660679Z Selecting previously unselected package libboost-regex1.71.0:amd64. 2021-05-18T14:12:54.6960509Z Preparing to unpack .../03-libboost-regex1.71.0_1.71.0-6ubuntu6_amd64.deb ... 2021-05-18T14:12:54.6982863Z Unpacking libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-05-18T14:12:54.7663804Z Selecting previously unselected package libsource-highlight4v5. 2021-05-18T14:12:54.7959260Z Preparing to unpack .../04-libsource-highlight4v5_3.1.8-1.2build5_amd64.deb ... 2021-05-18T14:12:54.7972473Z Unpacking libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-05-18T14:12:54.8480913Z Selecting previously unselected package libxxhash0:amd64. 2021-05-18T14:12:54.8730525Z Preparing to unpack .../05-libxxhash0_0.7.3-1_amd64.deb ... 2021-05-18T14:12:54.8745842Z Unpacking libxxhash0:amd64 (0.7.3-1) ... 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libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-18T14:13:05.4485671Z Setting up libsource-highlight-common (3.1.8-1.2build5) ... 2021-05-18T14:13:05.4518344Z Setting up libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-05-18T14:13:05.4537820Z Setting up libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-18T14:13:05.4556881Z Setting up libipt2 (2.0.1-1) ... 2021-05-18T14:13:05.4580511Z Setting up libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-05-18T14:13:05.4606399Z Setting up libbabeltrace1:amd64 (1.5.8-1build1) ... 2021-05-18T14:13:05.4627894Z Setting up rustc (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-18T14:13:05.4657970Z Setting up libxxhash0:amd64 (0.7.3-1) ... 2021-05-18T14:13:05.4676633Z Setting up libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-05-18T14:13:05.4698357Z Setting up cargo (0.47.0-1~exp1ubuntu1~20.04.1) ... 2021-05-18T14:13:05.4721326Z Setting up gdb (10.2-0ubuntu1~20.04~1) ... 2021-05-18T14:13:05.4752968Z Setting up rust-gdb (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-18T14:13:05.4788408Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:13:05.4999287Z Processing triggers for man-db (2.9.1-1) ... 2021-05-18T14:13:08.8699773Z Reading package lists... 2021-05-18T14:13:09.0501273Z Building dependency tree... 2021-05-18T14:13:09.0520496Z Reading state information... 2021-05-18T14:13:09.2350659Z The following additional packages will be installed: 2021-05-18T14:13:09.2352452Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-05-18T14:13:09.2353944Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-05-18T14:13:09.2355416Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-05-18T14:13:09.2359232Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-05-18T14:13:09.2360917Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-05-18T14:13:09.2362321Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-05-18T14:13:09.2363594Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-05-18T14:13:09.2365056Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-05-18T14:13:09.2366552Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-05-18T14:13:09.2368307Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-05-18T14:13:09.2369802Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-05-18T14:13:09.2371266Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-05-18T14:13:09.2372830Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-05-18T14:13:09.2374542Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-05-18T14:13:09.2376179Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-05-18T14:13:09.2377735Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-05-18T14:13:09.2379223Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-05-18T14:13:09.2380710Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-05-18T14:13:09.2382289Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-05-18T14:13:09.2383562Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-05-18T14:13:09.2384785Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-05-18T14:13:09.2386086Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-05-18T14:13:09.2387313Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-05-18T14:13:09.2388491Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-05-18T14:13:09.2389681Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-05-18T14:13:09.2391103Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-05-18T14:13:09.2392552Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-05-18T14:13:09.2394029Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-05-18T14:13:09.2395516Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-05-18T14:13:09.2396912Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-05-18T14:13:09.2398236Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-05-18T14:13:09.2399743Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-05-18T14:13:09.2400994Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-05-18T14:13:09.2402235Z python3-cycler python3-dateutil python3-decorator python3-future 2021-05-18T14:13:09.2403577Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-05-18T14:13:09.2404922Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-05-18T14:13:09.2406158Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-05-18T14:13:09.2407393Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-05-18T14:13:09.2408575Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-05-18T14:13:09.2409999Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-05-18T14:13:09.2411301Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-05-18T14:13:09.2412494Z python3-webencodings qdoc-qt5 qgis-common qgis-plugin-grass 2021-05-18T14:13:09.2413684Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-05-18T14:13:09.2415095Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-05-18T14:13:09.2416556Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-05-18T14:13:09.2417806Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-05-18T14:13:09.2419034Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-05-18T14:13:09.2420369Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-05-18T14:13:09.2421515Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-05-18T14:13:09.2422273Z Suggested packages: 2021-05-18T14:13:09.2423220Z avahi-autoipd blt-demo libgdal-grass grass-dev grass-gui e00compr avce00 2021-05-18T14:13:09.2424390Z gnuplot gpsbabel gpstrans netpbm python3-rpy2 python3-termcolor grass 2021-05-18T14:13:09.2425740Z grass-dev-doc gvfs exiv2 geotiff-bin libgeotiff-epsg libvisual-0.4-plugins 2021-05-18T14:13:09.2427053Z libhdf4-doc libhdf4-alt-dev hdf4-tools libjs-jquery-ui-docs avahi-autoipd 2021-05-18T14:13:09.2428176Z | zeroconf ogdi-bin pcscd libqscintilla2-doc qtwayland5 2021-05-18T14:13:09.2429381Z qt5-qmltooling-plugins pinentry-doc python-cycler-doc python-future-doc 2021-05-18T14:13:09.2430642Z python3-genshi python3-lxml-dbg python-lxml-doc dvipng gir1.2-gtk-3.0 2021-05-18T14:13:09.2431931Z inkscape ipython3 python-matplotlib-doc python3-cairocffi python3-gi-cairo 2021-05-18T14:13:09.2433123Z python3-gobject python3-nose python3-scipy python3-tornado 2021-05-18T14:13:09.2434353Z texlive-extra-utils texlive-latex-extra ttf-staypuft python-numpy-doc 2021-05-18T14:13:09.2435698Z python3-pytest python3-numpy-dbg owslib-doc python-pil-doc python3-pil-dbg 2021-05-18T14:13:09.2437055Z python3-pandas python3-ipykernel python-psycopg2-doc python-pyparsing-doc 2021-05-18T14:13:09.2438323Z python3-pyqt5-dbg otb-qgis saga tix python3-tk-dbg qt5-doc comgt wvdial 2021-05-18T14:13:09.2439270Z wpagui libengine-pkcs11-openssl 2021-05-18T14:13:09.3256028Z The following NEW packages will be installed: 2021-05-18T14:13:09.3258585Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-05-18T14:13:09.3260383Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-05-18T14:13:09.3262165Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-05-18T14:13:09.3263818Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-05-18T14:13:09.3265503Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-05-18T14:13:09.3267129Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-05-18T14:13:09.3268658Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-05-18T14:13:09.3270356Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-05-18T14:13:09.3272073Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-05-18T14:13:09.3273753Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-05-18T14:13:09.3275442Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-05-18T14:13:09.3277951Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-05-18T14:13:09.3279947Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-05-18T14:13:09.3281812Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-05-18T14:13:09.3283578Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-05-18T14:13:09.3285263Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-05-18T14:13:09.3287256Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-05-18T14:13:09.3288890Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-05-18T14:13:09.3290593Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-05-18T14:13:09.3291971Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-05-18T14:13:09.3293313Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-05-18T14:13:09.3294721Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-05-18T14:13:09.3296051Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-05-18T14:13:09.3297325Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-05-18T14:13:09.3298601Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-05-18T14:13:09.3300154Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-05-18T14:13:09.3301738Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-05-18T14:13:09.3303334Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-05-18T14:13:09.3306729Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-05-18T14:13:09.3308154Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-05-18T14:13:09.3309472Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-05-18T14:13:09.3310754Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-05-18T14:13:09.3312147Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-05-18T14:13:09.3313580Z python3-cycler python3-dateutil python3-decorator python3-future 2021-05-18T14:13:09.3315096Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-05-18T14:13:09.3316605Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-05-18T14:13:09.3317853Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-05-18T14:13:09.3319060Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-05-18T14:13:09.3320388Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-05-18T14:13:09.3321663Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-05-18T14:13:09.3322953Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-05-18T14:13:09.3324155Z python3-webencodings qdoc-qt5 qgis qgis-common qgis-plugin-grass 2021-05-18T14:13:09.3325360Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-05-18T14:13:09.3326793Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-05-18T14:13:09.3328242Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-05-18T14:13:09.3329490Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-05-18T14:13:09.3330713Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-05-18T14:13:09.3332068Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-05-18T14:13:09.3333193Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-05-18T14:13:09.3498110Z 0 upgraded, 214 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:13:09.3499104Z Need to get 183 MB of archives. 2021-05-18T14:13:09.3499796Z After this operation, 776 MB of additional disk space will be used. 2021-05-18T14:13:09.3501946Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdouble-conversion3 amd64 3.1.5-4ubuntu1 [37.9 kB] 2021-05-18T14:13:09.3524026Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5core5a amd64 5.12.8+dfsg-0ubuntu1 [2005 kB] 2021-05-18T14:13:09.3892005Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl-mesa0 amd64 20.2.6-0ubuntu0.20.04.1 [97.7 kB] 2021-05-18T14:13:09.3910890Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl1 amd64 1.3.2-1~ubuntu0.20.04.1 [31.9 kB] 2021-05-18T14:13:09.3922912Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libevdev2 amd64 1.9.0+dfsg-1ubuntu0.1 [31.6 kB] 2021-05-18T14:13:09.3933403Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmtdev1 amd64 1.1.5-1.1 [14.2 kB] 2021-05-18T14:13:09.3939276Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-common all 1.3-2ubuntu3 [45.3 kB] 2021-05-18T14:13:09.3952010Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom2 amd64 1.3-2ubuntu3 [20.0 kB] 2021-05-18T14:13:09.3961601Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput-bin amd64 1.15.5-1ubuntu0.2 [19.1 kB] 2021-05-18T14:13:09.3970411Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput10 amd64 1.15.5-1ubuntu0.2 [112 kB] 2021-05-18T14:13:09.3997475Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5dbus5 amd64 5.12.8+dfsg-0ubuntu1 [208 kB] 2021-05-18T14:13:09.4035837Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5network5 amd64 5.12.8+dfsg-0ubuntu1 [674 kB] 2021-05-18T14:13:09.4151893Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [10.8 kB] 2021-05-18T14:13:09.4157734Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-util1 amd64 0.4.0-0ubuntu3 [11.2 kB] 2021-05-18T14:13:09.4162961Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-image0 amd64 0.4.0-1build1 [12.3 kB] 2021-05-18T14:13:09.4174739Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-keysyms1 amd64 0.4.0-1build1 [8452 B] 2021-05-18T14:13:09.4186557Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-randr0 amd64 1.14-2 [16.3 kB] 2021-05-18T14:13:09.4193931Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-render-util0 amd64 0.3.9-1build1 [9912 B] 2021-05-18T14:13:09.4204172Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinerama0 amd64 1.14-2 [5260 B] 2021-05-18T14:13:09.4211512Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinput0 amd64 1.14-2 [29.3 kB] 2021-05-18T14:13:09.4224421Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xkb1 amd64 1.14-2 [29.6 kB] 2021-05-18T14:13:09.4233222Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxkbcommon-x11-0 amd64 0.10.0-1 [13.4 kB] 2021-05-18T14:13:09.4242463Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5gui5 amd64 5.12.8+dfsg-0ubuntu1 [2971 kB] 2021-05-18T14:13:09.4784072Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5widgets5 amd64 5.12.8+dfsg-0ubuntu1 [2293 kB] 2021-05-18T14:13:09.5213829Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5svg5 amd64 5.12.8-0ubuntu1 [131 kB] 2021-05-18T14:13:09.5231656Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liborc-0.4-0 amd64 1:0.4.31-1 [188 kB] 2021-05-18T14:13:09.5300580Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgstreamer-plugins-base1.0-0 amd64 1.16.2-4 [735 kB] 2021-05-18T14:13:09.5394243Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhyphen0 amd64 2.8.8-7 [27.0 kB] 2021-05-18T14:13:09.5403957Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5positioning5 amd64 5.12.8+dfsg-0ubuntu1 [197 kB] 2021-05-18T14:13:09.5476747Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5printsupport5 amd64 5.12.8+dfsg-0ubuntu1 [193 kB] 2021-05-18T14:13:09.5528429Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5qml5 amd64 5.12.8-0ubuntu1 [1438 kB] 2021-05-18T14:13:09.5915622Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quick5 amd64 5.12.8-0ubuntu1 [1335 kB] 2021-05-18T14:13:09.6204589Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sensors5 amd64 5.12.8-0ubuntu1 [114 kB] 2021-05-18T14:13:09.6234042Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webchannel5 amd64 5.12.8-0ubuntu1 [51.2 kB] 2021-05-18T14:13:09.6250940Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwoff1 amd64 1.0.2-1build2 [42.0 kB] 2021-05-18T14:13:09.6262038Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webkit5 amd64 5.212.0~alpha4-1ubuntu2 [12.1 MB] 2021-05-18T14:13:09.8605077Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-image-formats-plugins amd64 5.12.8-0ubuntu1 [43.4 kB] 2021-05-18T14:13:09.8613592Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers-common all 3.10.4+dfsg-1ubuntu2 [897 kB] 2021-05-18T14:13:09.8857174Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2 amd64 2.2.1-2build1 [307 kB] 2021-05-18T14:13:09.8920622Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2-plugins amd64 2.2.1-2build1 [191 kB] 2021-05-18T14:13:09.8959900Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5 amd64 5.12.8+dfsg-0ubuntu1 [121 kB] 2021-05-18T14:13:09.8987503Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5-sqlite amd64 5.12.8+dfsg-0ubuntu1 [47.5 kB] 2021-05-18T14:13:09.9002053Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-data all 3.0.4+dfsg-1build3 [186 kB] 2021-05-18T14:13:09.9043420Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarpack2 amd64 3.7.0-3 [92.8 kB] 2021-05-18T14:13:09.9065328Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsuperlu5 amd64 5.2.1+dfsg1-4 [159 kB] 2021-05-18T14:13:09.9094932Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarmadillo9 amd64 1:9.800.4+dfsg-1build1 [93.2 kB] 2021-05-18T14:13:09.9111749Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcfitsio8 amd64 3.470-3 [466 kB] 2021-05-18T14:13:09.9181834Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcharls2 amd64 2.0.0+dfsg-1build1 [74.1 kB] 2021-05-18T14:13:09.9197347Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdap25 amd64 3.20.5-1 [435 kB] 2021-05-18T14:13:09.9312382Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdapclient6v5 amd64 3.20.5-1 [92.2 kB] 2021-05-18T14:13:09.9444026Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libepsilon1 amd64 0.9.2+dfsg-4 [41.0 kB] 2021-05-18T14:13:09.9454332Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfreexl1 amd64 1.0.5-3 [33.4 kB] 2021-05-18T14:13:09.9468487Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfyba0 amd64 4.1.1-6build1 [113 kB] 2021-05-18T14:13:09.9493978Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-3.8.0 amd64 3.8.0-1build1 [535 kB] 2021-05-18T14:13:09.9635142Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-c1v5 amd64 3.8.0-1build1 [69.9 kB] 2021-05-18T14:13:09.9657137Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-data all 6.3.1-1 [7647 kB] 2021-05-18T14:13:10.0991918Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libproj15 amd64 6.3.1-1 [925 kB] 2021-05-18T14:13:10.1126933Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeotiff5 amd64 1.5.1-2 [53.1 kB] 2021-05-18T14:13:10.1136928Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf4-0-alt amd64 4.2.14-1ubuntu1 [268 kB] 2021-05-18T14:13:10.1181801Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libminizip1 amd64 1.1-8build1 [20.2 kB] 2021-05-18T14:13:10.1189257Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liburiparser1 amd64 0.9.3-2 [39.3 kB] 2021-05-18T14:13:10.1208581Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlbase1 amd64 1.3.0-8build1 [45.4 kB] 2021-05-18T14:13:10.1220787Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmldom1 amd64 1.3.0-8build1 [152 kB] 2021-05-18T14:13:10.1247254Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlengine1 amd64 1.3.0-8build1 [72.5 kB] 2021-05-18T14:13:10.1264000Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnetcdf15 amd64 1:4.7.3-1 [341 kB] 2021-05-18T14:13:10.1334594Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libogdi4.1 amd64 4.1.0+ds-1build1 [198 kB] 2021-05-18T14:13:10.1364836Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqhull7 amd64 2015.2-4 [152 kB] 2021-05-18T14:13:10.1389547Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialite7 amd64 4.3.0a-6build1 [1286 kB] 2021-05-18T14:13:10.1586141Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxerces-c3.2 amd64 3.2.2+debian-1build3 [878 kB] 2021-05-18T14:13:10.1723054Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgdal26 amd64 3.0.4+dfsg-1build3 [6156 kB] 2021-05-18T14:13:10.3003093Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5concurrent5 amd64 5.12.8+dfsg-0ubuntu1 [33.5 kB] 2021-05-18T14:13:10.3012532Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5keychain1 amd64 0.10.0-1build1 [48.4 kB] 2021-05-18T14:13:10.3027655Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5serialport5 amd64 5.12.8-0ubuntu1 [33.1 kB] 2021-05-18T14:13:10.3036429Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5xml5 amd64 5.12.8+dfsg-0ubuntu1 [105 kB] 2021-05-18T14:13:10.3060838Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialindex6 amd64 1.9.3-1build1 [266 kB] 2021-05-18T14:13:10.3115974Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzip5 amd64 1.5.1-0ubuntu1 [46.7 kB] 2021-05-18T14:13:10.3129473Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-core3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [5216 kB] 2021-05-18T14:13:10.4200875Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-native3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [44.5 kB] 2021-05-18T14:13:10.4207955Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-l10n all 2.11.2+dfsg-6 [41.3 kB] 2021-05-18T14:13:10.4222550Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-15 amd64 2.11.2+dfsg-6 [1238 kB] 2021-05-18T14:13:10.4412520Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quickwidgets5 amd64 5.12.8-0ubuntu1 [39.8 kB] 2021-05-18T14:13:10.4427132Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5opengl5 amd64 5.12.8+dfsg-0ubuntu1 [136 kB] 2021-05-18T14:13:10.4453573Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqwt-qt5-6 amd64 6.1.4-1.1build1 [427 kB] 2021-05-18T14:13:10.4537974Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-gui3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3195 kB] 2021-05-18T14:13:10.5108160Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers amd64 3.10.4+dfsg-1ubuntu2 [1940 kB] 2021-05-18T14:13:10.5456075Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-core7 amd64 0.7-4ubuntu7 [81.7 kB] 2021-05-18T14:13:10.5468279Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdaemon0 amd64 0.14-7 [13.9 kB] 2021-05-18T14:13:10.5473745Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 avahi-daemon amd64 0.7-4ubuntu7 [61.0 kB] 2021-05-18T14:13:10.5485594Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4 [572 kB] 2021-05-18T14:13:10.5587712Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 blt amd64 2.5.3+dfsg-4 [4944 B] 2021-05-18T14:13:10.5589403Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 fonts-lyx all 2.3.4.2-2 [154 kB] 2021-05-18T14:13:10.5617052Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgck-1-0 amd64 3.36.0-2build1 [75.5 kB] 2021-05-18T14:13:10.5626351Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-base-3-1 amd64 3.36.0-2build1 [193 kB] 2021-05-18T14:13:10.5660916Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-ui-3-1 amd64 3.36.0-2build1 [127 kB] 2021-05-18T14:13:10.5683674Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gcr amd64 3.36.0-2build1 [63.9 kB] 2021-05-18T14:13:10.5700334Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-numpy amd64 1:1.17.4-5ubuntu3 [2725 kB] 2021-05-18T14:13:10.6123529Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-gdal amd64 3.0.4+dfsg-1build3 [527 kB] 2021-05-18T14:13:10.6193946Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-bin amd64 3.0.4+dfsg-1build3 [256 kB] 2021-05-18T14:13:10.6234999Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-glib1 amd64 0.7-4ubuntu7 [7804 B] 2021-05-18T14:13:10.6242776Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmm-glib0 amd64 1.12.8-1 [185 kB] 2021-05-18T14:13:10.6266587Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 geoclue-2.0 amd64 2.5.6-0ubuntu1 [91.9 kB] 2021-05-18T14:13:10.6384046Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit-modules amd64 0.23.20-1ubuntu0.1 [231 kB] 2021-05-18T14:13:10.6570901Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit amd64 0.23.20-1ubuntu0.1 [93.8 kB] 2021-05-18T14:13:10.6677220Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 pinentry-gnome3 amd64 1.1.0-3build1 [38.6 kB] 2021-05-18T14:13:10.6778847Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring amd64 3.36.0-1ubuntu1 [613 kB] 2021-05-18T14:13:10.7041000Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring-pkcs11 amd64 3.36.0-1ubuntu1 [28.0 kB] 2021-05-18T14:13:10.7127901Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-doc all 7.8.2-1build3 [32.4 MB] 2021-05-18T14:13:11.8343582Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblaszip8 amd64 3.4.3-1build1 [125 kB] 2021-05-18T14:13:11.8488286Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-util9 amd64 2.0.1+ds-1build3 [68.5 kB] 2021-05-18T14:13:11.8551851Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-base9 amd64 2.0.1+ds-1build3 [1739 kB] 2021-05-18T14:13:11.9291842Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-core amd64 7.8.2-1build3 [5737 kB] 2021-05-18T14:13:12.2502673Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdparanoia0 amd64 3.10.2+debian-13 [46.7 kB] 2021-05-18T14:13:12.2581706Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvisual-0.4-0 amd64 0.4.0-17 [99.8 kB] 2021-05-18T14:13:12.2710369Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gstreamer1.0-plugins-base amd64 1.16.2-4 [619 kB] 2021-05-18T14:13:12.2986161Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 iio-sensor-proxy amd64 2.8-1ubuntu1 [35.8 kB] 2021-05-18T14:13:12.3120855Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libassimp5 amd64 5.0.1~ds0-1build1 [2775 kB] 2021-05-18T14:13:12.4246768Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libexiv2-27 amd64 0.27.2-8ubuntu2.2 [788 kB] 2021-05-18T14:13:12.4577514Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi0ldbl amd64 2.4.0-10build1 [155 kB] 2021-05-18T14:13:12.4690037Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi-bin amd64 2.4.0-10build1 [10.5 kB] 2021-05-18T14:13:12.4691837Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimagequant0 amd64 2.12.2-1.1 [31.4 kB] 2021-05-18T14:13:12.4742659Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] 2021-05-18T14:13:12.4889864Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-glib4 amd64 1.22.0-2 [101 kB] 2021-05-18T14:13:12.4990152Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-proxy amd64 1.22.0-2 [5908 B] 2021-05-18T14:13:12.5031206Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-genl-3-200 amd64 3.4.0-1 [11.1 kB] 2021-05-18T14:13:12.5038663Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-route-3-200 amd64 3.4.0-1 [149 kB] 2021-05-18T14:13:12.5112686Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnss-mdns amd64 0.14.1-1ubuntu1 [22.9 kB] 2021-05-18T14:13:12.5184904Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpam-gnome-keyring amd64 3.36.0-1ubuntu1 [23.3 kB] 2021-05-18T14:13:12.5218150Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpcsclite1 amd64 1.8.26-3 [22.0 kB] 2021-05-18T14:13:12.5467172Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-faux amd64 2.0.1+ds-1build3 [27.3 kB] 2021-05-18T14:13:12.5531830Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-icebridge amd64 2.0.1+ds-1build3 [42.8 kB] 2021-05-18T14:13:12.5614110Z Get:131 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-pgpointcloud amd64 2.0.1+ds-1build3 [75.3 kB] 2021-05-18T14:13:12.5744335Z Get:132 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-python amd64 2.0.1+ds-1build3 [136 kB] 2021-05-18T14:13:12.5877456Z Get:133 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsqlite3-mod-spatialite amd64 4.3.0a-6build1 [1265 kB] 2021-05-18T14:13:12.6437262Z Get:134 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-sqlite amd64 2.0.1+ds-1build3 [89.5 kB] 2021-05-18T14:13:12.6705311Z Get:135 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugins amd64 2.0.1+ds-1build3 [12.9 kB] 2021-05-18T14:13:12.6753222Z Get:136 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dcore5 amd64 5.12.8+dfsg-0ubuntu1 [137 kB] 2021-05-18T14:13:12.6917646Z Get:137 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53drender5 amd64 5.12.8+dfsg-0ubuntu1 [689 kB] 2021-05-18T14:13:12.7294915Z Get:138 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53danimation5 amd64 5.12.8+dfsg-0ubuntu1 [159 kB] 2021-05-18T14:13:12.7467724Z Get:139 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dinput5 amd64 5.12.8+dfsg-0ubuntu1 [125 kB] 2021-05-18T14:13:12.7601386Z Get:140 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dlogic5 amd64 5.12.8+dfsg-0ubuntu1 [25.9 kB] 2021-05-18T14:13:12.7676000Z Get:141 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dextras5 amd64 5.12.8+dfsg-0ubuntu1 [157 kB] 2021-05-18T14:13:12.7822525Z Get:142 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-assimpsceneimport-plugin amd64 5.12.8+dfsg-0ubuntu1 [45.2 kB] 2021-05-18T14:13:12.7957185Z Get:143 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-defaultgeometryloader-plugin amd64 5.12.8+dfsg-0ubuntu1 [33.3 kB] 2021-05-18T14:13:12.8066671Z Get:144 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-gltfsceneio-plugin amd64 5.12.8+dfsg-0ubuntu1 [110 kB] 2021-05-18T14:13:12.8211107Z Get:145 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dquickscene2d5 amd64 5.12.8+dfsg-0ubuntu1 [38.4 kB] 2021-05-18T14:13:12.8503461Z Get:146 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-scene2d-plugin amd64 5.12.8+dfsg-0ubuntu1 [17.1 kB] 2021-05-18T14:13:12.8598207Z Get:147 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-3d3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [224 kB] 2021-05-18T14:13:12.8808062Z Get:148 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-analysis3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [927 kB] 2021-05-18T14:13:12.9402398Z Get:149 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-app3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3060 kB] 2021-05-18T14:13:13.1949799Z Get:150 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtchooser amd64 66-2build1 [24.7 kB] 2021-05-18T14:13:13.2289145Z Get:151 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qdoc-qt5 amd64 5.12.8-0ubuntu1 [507 kB] 2021-05-18T14:13:13.2548456Z Get:152 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5help5 amd64 5.12.8-0ubuntu1 [134 kB] 2021-05-18T14:13:13.2664104Z Get:153 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qhelpgenerator-qt5 amd64 5.12.8-0ubuntu1 [64.3 kB] 2021-05-18T14:13:13.2786447Z Get:154 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-assistant amd64 5.12.8-0ubuntu1 [369 kB] 2021-05-18T14:13:13.3015444Z Get:155 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtattributionsscanner-qt5 amd64 5.12.8-0ubuntu1 [26.0 kB] 2021-05-18T14:13:13.3151052Z Get:156 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designer5 amd64 5.12.8-0ubuntu1 [2778 kB] 2021-05-18T14:13:13.4259388Z Get:157 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designercomponents5 amd64 5.12.8-0ubuntu1 [718 kB] 2021-05-18T14:13:13.4647352Z Get:158 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttools5-dev-tools amd64 5.12.8-0ubuntu1 [1031 kB] 2021-05-18T14:13:13.5083289Z Get:159 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-customwidgets amd64 3.10.4+dfsg-1ubuntu2 [3397 kB] 2021-05-18T14:13:14.2232051Z Get:160 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-server3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [311 kB] 2021-05-18T14:13:14.2425266Z Get:161 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgisgrass7-3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [228 kB] 2021-05-18T14:13:14.2605078Z Get:162 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgispython3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [43.1 kB] 2021-05-18T14:13:14.2709162Z Get:163 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-glib5 amd64 1.24.8-1 [529 kB] 2021-05-18T14:13:14.2991929Z Get:164 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-proxy amd64 1.24.8-1 [5856 B] 2021-05-18T14:13:14.3043607Z Get:165 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5test5 amd64 5.12.8+dfsg-0ubuntu1 [131 kB] 2021-05-18T14:13:14.3133730Z Get:166 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-bin amd64 1.3-2ubuntu3 [5484 B] 2021-05-18T14:13:14.3218843Z Get:167 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 modemmanager amd64 1.12.8-1 [755 kB] 2021-05-18T14:13:14.3538382Z Get:168 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 ttf-bitstream-vera all 1.10-8 [352 kB] 2021-05-18T14:13:14.3731100Z Get:169 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python-matplotlib-data all 3.1.2-1ubuntu4 [3788 kB] 2021-05-18T14:13:14.5504945Z Get:170 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-soupsieve all 1.9.5+dfsg-1 [29.1 kB] 2021-05-18T14:13:14.5569584Z Get:171 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-bs4 all 4.8.2-1 [83.0 kB] 2021-05-18T14:13:14.5700128Z Get:172 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-cycler all 0.10.0-3 [8132 B] 2021-05-18T14:13:14.5707934Z Get:173 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-dateutil all 2.7.3-3ubuntu1 [63.3 kB] 2021-05-18T14:13:14.5773588Z Get:174 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-decorator all 4.4.2-0ubuntu1 [10.3 kB] 2021-05-18T14:13:14.5824196Z Get:175 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-future all 0.18.2-2 [336 kB] 2021-05-18T14:13:14.6005131Z Get:176 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-webencodings all 0.5.1-1ubuntu1 [11.0 kB] 2021-05-18T14:13:14.6052593Z Get:177 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-html5lib all 1.0.1-2 [84.3 kB] 2021-05-18T14:13:14.6145422Z Get:178 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-ipython-genutils all 0.2.0-1ubuntu1 [21.1 kB] 2021-05-18T14:13:14.6529590Z Get:179 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-traitlets all 4.3.3-3 [59.9 kB] 2021-05-18T14:13:14.6612753Z Get:180 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-jupyter-core all 4.6.3-3 [41.2 kB] 2021-05-18T14:13:14.6692050Z Get:181 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-kiwisolver amd64 1.0.1-3build1 [61.3 kB] 2021-05-18T14:13:14.6785365Z Get:182 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-lxml amd64 4.5.0-1ubuntu0.3 [1382 kB] 2021-05-18T14:13:14.7253086Z Get:183 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-pyparsing all 2.4.6-1 [61.3 kB] 2021-05-18T14:13:14.7316931Z Get:184 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-matplotlib amd64 3.1.2-1ubuntu4 [4459 kB] 2021-05-18T14:13:14.8882746Z Get:185 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-nbformat all 5.0.4-1 [29.8 kB] 2021-05-18T14:13:14.8912655Z Get:186 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-olefile all 0.46-2 [33.7 kB] 2021-05-18T14:13:14.9020753Z Get:187 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyproj amd64 2.5.0+ds-1 [297 kB] 2021-05-18T14:13:14.9183339Z Get:188 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-tz all 2019.3-1 [24.4 kB] 2021-05-18T14:13:14.9284893Z Get:189 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-owslib all 0.19.1-1 [115 kB] 2021-05-18T14:13:14.9464089Z Get:190 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-pil amd64 7.0.0-4ubuntu0.3 [363 kB] 2021-05-18T14:13:14.9585344Z Get:191 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-retrying all 1.3.3-4 [8160 B] 2021-05-18T14:13:14.9661844Z Get:192 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-plotly all 4.4.1+dfsg-1 [1960 kB] 2021-05-18T14:13:15.0338884Z Get:193 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-psycopg2 amd64 2.8.4-2 [112 kB] 2021-05-18T14:13:15.0453566Z Get:194 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-sip amd64 4.19.21+dfsg-1build1 [87.9 kB] 2021-05-18T14:13:15.0560501Z Get:195 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5 amd64 5.14.1+dfsg-3build1 [2318 kB] 2021-05-18T14:13:15.1364354Z Get:196 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qsci amd64 2.11.2+dfsg-6 [230 kB] 2021-05-18T14:13:15.1548264Z Get:197 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsql amd64 5.14.1+dfsg-3build1 [87.5 kB] 2021-05-18T14:13:15.1641106Z Get:198 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsvg amd64 5.14.1+dfsg-3build1 [26.9 kB] 2021-05-18T14:13:15.1710555Z Get:199 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtwebkit amd64 5.14.1+dfsg-3build1 [103 kB] 2021-05-18T14:13:15.2230338Z Get:200 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis-common all 3.10.4+dfsg-1ubuntu2 [2390 kB] 2021-05-18T14:13:15.5892478Z Get:201 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis amd64 3.10.4+dfsg-1ubuntu2 [7772 kB] 2021-05-18T14:13:15.8556417Z Get:202 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-tk amd64 3.8.5-1~20.04.1 [103 kB] 2021-05-18T14:13:15.8590461Z Get:203 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-leaflet all 1.6.0~dfsg-1 [313 kB] 2021-05-18T14:13:15.8642081Z Get:204 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-common all 3.10.4+dfsg-1ubuntu2 [16.7 MB] 2021-05-18T14:13:16.3519220Z Get:205 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis amd64 3.10.4+dfsg-1ubuntu2 [4788 kB] 2021-05-18T14:13:16.3889179Z Get:206 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass-common all 3.10.4+dfsg-1ubuntu2 [463 kB] 2021-05-18T14:13:16.3932712Z Get:207 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-provider-grass amd64 3.10.4+dfsg-1ubuntu2 [92.3 kB] 2021-05-18T14:13:16.3944658Z Get:208 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass amd64 3.10.4+dfsg-1ubuntu2 [601 kB] 2021-05-18T14:13:16.3994741Z Get:209 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-gtk-platformtheme amd64 5.12.8+dfsg-0ubuntu1 [124 kB] 2021-05-18T14:13:16.4008605Z Get:210 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttranslations5-l10n all 5.12.8-0ubuntu1 [1486 kB] 2021-05-18T14:13:16.4126091Z Get:211 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 wpasupplicant amd64 2:2.9-1ubuntu4.3 [1183 kB] 2021-05-18T14:13:16.4238708Z Get:212 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-bin amd64 6.3.1-1 [88.8 kB] 2021-05-18T14:13:16.4248210Z Get:213 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch-data all 20191128-3 [32.3 kB] 2021-05-18T14:13:16.4254643Z Get:214 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch amd64 2.5.2+repack0-2ubuntu3 [53.1 kB] 2021-05-18T14:13:17.4844504Z Fetched 183 MB in 7s (25.8 MB/s) 2021-05-18T14:13:17.5182507Z Selecting previously unselected package libdouble-conversion3:amd64. 2021-05-18T14:13:17.5262488Z (Reading database ... 2021-05-18T14:13:17.5263069Z (Reading database ... 5% 2021-05-18T14:13:17.5263551Z (Reading database ... 10% 2021-05-18T14:13:17.5264007Z (Reading database ... 15% 2021-05-18T14:13:17.5264474Z (Reading database ... 20% 2021-05-18T14:13:17.5264935Z (Reading database ... 25% 2021-05-18T14:13:17.5265398Z (Reading database ... 30% 2021-05-18T14:13:17.5265862Z (Reading database ... 35% 2021-05-18T14:13:17.5266313Z (Reading database ... 40% 2021-05-18T14:13:17.5266774Z (Reading database ... 45% 2021-05-18T14:13:17.5267221Z (Reading database ... 50% 2021-05-18T14:13:17.5305462Z (Reading database ... 55% 2021-05-18T14:13:17.5351091Z (Reading database ... 60% 2021-05-18T14:13:17.5381456Z (Reading database ... 65% 2021-05-18T14:13:17.5503306Z (Reading database ... 70% 2021-05-18T14:13:17.5626000Z (Reading database ... 75% 2021-05-18T14:13:17.5653384Z (Reading database ... 80% 2021-05-18T14:13:17.6056365Z (Reading database ... 85% 2021-05-18T14:13:17.6388809Z (Reading database ... 90% 2021-05-18T14:13:17.6473843Z (Reading database ... 95% 2021-05-18T14:13:17.6474509Z (Reading database ... 100% 2021-05-18T14:13:17.6475351Z (Reading database ... 269928 files and directories currently installed.) 2021-05-18T14:13:17.6600950Z Preparing to unpack .../000-libdouble-conversion3_3.1.5-4ubuntu1_amd64.deb ... 2021-05-18T14:13:17.6636039Z Unpacking libdouble-conversion3:amd64 (3.1.5-4ubuntu1) ... 2021-05-18T14:13:17.6989977Z Selecting previously unselected package libqt5core5a:amd64. 2021-05-18T14:13:17.7279615Z Preparing to unpack .../001-libqt5core5a_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-05-18T14:13:17.7359655Z Unpacking libqt5core5a:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:17.9241508Z Selecting previously unselected package libegl-mesa0:amd64. 2021-05-18T14:13:17.9438707Z Preparing to unpack .../002-libegl-mesa0_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-18T14:13:17.9457877Z Unpacking libegl-mesa0:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-18T14:13:17.9809793Z Selecting previously unselected package libegl1:amd64. 2021-05-18T14:13:18.0099732Z Preparing to unpack .../003-libegl1_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-18T14:13:18.0115895Z Unpacking libegl1:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-18T14:13:18.0390202Z Selecting previously unselected package libevdev2:amd64. 2021-05-18T14:13:18.0678023Z Preparing to unpack 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(0.7-4ubuntu7) ... 2021-05-18T14:13:50.4427437Z Setting up libqca-qt5-2:amd64 (2.2.1-2build1) ... 2021-05-18T14:13:50.4447295Z Setting up python-matplotlib-data (3.1.2-1ubuntu4) ... 2021-05-18T14:13:50.4477664Z Setting up libgcr-base-3-1:amd64 (3.36.0-2build1) ... 2021-05-18T14:13:50.4501165Z Setting up libevdev2:amd64 (1.9.0+dfsg-1ubuntu0.1) ... 2021-05-18T14:13:50.4521415Z Setting up libqt5concurrent5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:50.4544637Z Setting up libpam-gnome-keyring:amd64 (3.36.0-1ubuntu1) ... 2021-05-18T14:13:50.7380597Z Setting up python3-soupsieve (1.9.5+dfsg-1) ... 2021-05-18T14:13:50.8922150Z Setting up python3-jupyter-core (4.6.3-3) ... 2021-05-18T14:13:51.0458789Z Setting up libmbim-glib4:amd64 (1.22.0-2) ... 2021-05-18T14:13:51.0476196Z Setting up qtchooser (66-2build1) ... 2021-05-18T14:13:51.0497029Z Setting up libwacom-common (1.3-2ubuntu3) ... 2021-05-18T14:13:51.0520774Z Setting up python3-sip (4.19.21+dfsg-1build1) ... 2021-05-18T14:13:51.2039049Z Setting up libkmldom1:amd64 (1.3.0-8build1) ... 2021-05-18T14:13:51.2059248Z Setting up libspatialite7:amd64 (4.3.0a-6build1) ... 2021-05-18T14:13:51.2080826Z Setting up libgcr-ui-3-1:amd64 (3.36.0-2build1) ... 2021-05-18T14:13:51.2101474Z Setting up python3-matplotlib (3.1.2-1ubuntu4) ... 2021-05-18T14:13:52.1332700Z Setting up libkmlengine1:amd64 (1.3.0-8build1) ... 2021-05-18T14:13:52.1355710Z Setting up libqt5keychain1:amd64 (0.10.0-1build1) ... 2021-05-18T14:13:52.1377318Z Setting up libsqlite3-mod-spatialite:amd64 (4.3.0a-6build1) ... 2021-05-18T14:13:52.1406376Z Setting up qdoc-qt5 (5.12.8-0ubuntu1) ... 2021-05-18T14:13:52.1429070Z Setting up libqt5positioning5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:52.1453708Z Setting up proj-bin (6.3.1-1) ... 2021-05-18T14:13:52.1478603Z Setting up libqca-qt5-2-plugins:amd64 (2.2.1-2build1) ... 2021-05-18T14:13:52.1499946Z Setting up libgstreamer-plugins-base1.0-0:amd64 (1.16.2-4) ... 2021-05-18T14:13:52.1524141Z Setting up geoclue-2.0 (2.5.6-0ubuntu1) ... 2021-05-18T14:13:52.5244277Z geoclue.service is a disabled or a static unit, not starting it. 2021-05-18T14:13:52.5263458Z Setting up libqt5serialport5:amd64 (5.12.8-0ubuntu1) ... 2021-05-18T14:13:52.5288659Z Setting up python3-nbformat (5.0.4-1) ... 2021-05-18T14:13:52.6847210Z Setting up libmbim-proxy (1.22.0-2) ... 2021-05-18T14:13:52.6870071Z Setting up python3-pyproj (2.5.0+ds-1) ... 2021-05-18T14:13:52.8456342Z Setting up libqt5network5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:52.8478061Z Setting up python3-bs4 (4.8.2-1) ... 2021-05-18T14:13:53.0316109Z Setting up libgeotiff5:amd64 (1.5.1-2) ... 2021-05-18T14:13:53.0334809Z Setting up gcr (3.36.0-2build1) ... 2021-05-18T14:13:53.0357193Z Setting up libqt5sql5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:53.0378785Z Setting up wpasupplicant (2:2.9-1ubuntu4.3) ... 2021-05-18T14:13:53.1620883Z Created symlink /etc/systemd/system/dbus-fi.w1.wpa_supplicant1.service → /lib/systemd/system/wpa_supplicant.service. 2021-05-18T14:13:53.1623840Z Created symlink /etc/systemd/system/multi-user.target.wants/wpa_supplicant.service → /lib/systemd/system/wpa_supplicant.service. 2021-05-18T14:13:53.6571485Z Setting up python3-pil:amd64 (7.0.0-4ubuntu0.3) ... 2021-05-18T14:13:53.9239883Z Setting up libqt5xml5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:53.9265364Z Setting up gstreamer1.0-plugins-base:amd64 (1.16.2-4) ... 2021-05-18T14:13:53.9285535Z Setting up libqt5qml5:amd64 (5.12.8-0ubuntu1) ... 2021-05-18T14:13:53.9308995Z Setting up qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:13:53.9332984Z Setting up qtattributionsscanner-qt5 (5.12.8-0ubuntu1) ... 2021-05-18T14:13:53.9354095Z Setting up libqt5webchannel5:amd64 (5.12.8-0ubuntu1) ... 2021-05-18T14:13:53.9375538Z Setting up python3-plotly (4.4.1+dfsg-1) ... 2021-05-18T14:13:54.0865204Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-18T14:13:54.0868227Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-05-18T14:13:54.0871295Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-18T14:13:54.0873769Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-05-18T14:13:54.1290104Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:194: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-18T14:13:54.1291100Z if direction is "increasing": 2021-05-18T14:13:54.1292400Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:199: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-18T14:13:54.1293330Z elif direction is "decreasing": 2021-05-18T14:13:54.1464726Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:176: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-18T14:13:54.1465698Z if direction is "increasing": 2021-05-18T14:13:54.1466958Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:179: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-18T14:13:54.1467834Z elif direction is "decreasing": 2021-05-18T14:13:55.0320652Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:460: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-18T14:13:55.0322221Z if props["offset_coordinates"] is "data": 2021-05-18T14:13:55.0324020Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:572: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-05-18T14:13:55.0325273Z if props["coordinates"] is not "data": 2021-05-18T14:13:55.7642313Z Setting up avahi-daemon (0.7-4ubuntu7) ... 2021-05-18T14:13:56.3324005Z Created symlink /etc/systemd/system/dbus-org.freedesktop.Avahi.service → /lib/systemd/system/avahi-daemon.service. 2021-05-18T14:13:56.3327160Z Created symlink /etc/systemd/system/multi-user.target.wants/avahi-daemon.service → /lib/systemd/system/avahi-daemon.service. 2021-05-18T14:13:56.3329512Z Created symlink /etc/systemd/system/sockets.target.wants/avahi-daemon.socket → /lib/systemd/system/avahi-daemon.socket. 2021-05-18T14:13:57.4287321Z Setting up libnss-mdns:amd64 (0.14.1-1ubuntu1) ... 2021-05-18T14:13:57.4318181Z First installation detected... 2021-05-18T14:13:57.4320733Z Checking NSS setup... 2021-05-18T14:13:57.4356321Z Setting up libwacom2:amd64 (1.3-2ubuntu3) ... 2021-05-18T14:13:57.4404288Z Setting up libqt5sql5-sqlite:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:57.4436702Z Setting up python3-owslib (0.19.1-1) ... 2021-05-18T14:13:57.7107805Z Setting up libgdal26 (3.0.4+dfsg-1build3) ... 2021-05-18T14:13:57.7126337Z Setting up libqmi-glib5:amd64 (1.24.8-1) ... 2021-05-18T14:13:57.7158478Z Setting up libpdal-base9 (2.0.1+ds-1build3) ... 2021-05-18T14:13:57.7190090Z Setting up libinput-bin (1.15.5-1ubuntu0.2) ... 2021-05-18T14:13:57.7218152Z Setting up libwacom-bin (1.3-2ubuntu3) ... 2021-05-18T14:13:57.7264927Z Setting up libpdal-plugin-pgpointcloud (2.0.1+ds-1build3) ... 2021-05-18T14:13:57.7295850Z Setting up libpdal-plugin-icebridge (2.0.1+ds-1build3) ... 2021-05-18T14:13:57.7321559Z Setting up libpdal-plugin-python (2.0.1+ds-1build3) ... 2021-05-18T14:13:57.7343061Z Setting up python3-gdal (3.0.4+dfsg-1build3) ... 2021-05-18T14:13:57.9191628Z Setting up libinput10:amd64 (1.15.5-1ubuntu0.2) ... 2021-05-18T14:13:57.9215072Z Setting up libpdal-plugin-faux (2.0.1+ds-1build3) ... 2021-05-18T14:13:57.9235010Z Setting up grass-core (7.8.2-1build3) ... 2021-05-18T14:13:58.2661772Z /usr/lib/grass78/etc/python/grass/pygrass/gis/__init__.py:75: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-18T14:13:58.2663978Z if value is '': 2021-05-18T14:13:58.3619164Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-18T14:13:58.3620617Z if do_profiling is "True" or do_profiling is "1": 2021-05-18T14:13:58.3621865Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-18T14:13:58.3622965Z if do_profiling is "True" or do_profiling is "1": 2021-05-18T14:13:58.3624293Z /usr/lib/grass78/etc/python/grass/temporal/core.py:582: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-05-18T14:13:58.3625431Z if driver_string is not None and driver_string is not "": 2021-05-18T14:13:58.4050220Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-18T14:13:58.4051793Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-05-18T14:13:58.4053221Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-18T14:13:58.4054492Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-05-18T14:13:58.4665981Z Setting up libpdal-plugin-sqlite (2.0.1+ds-1build3) ... 2021-05-18T14:13:58.4693560Z Setting up libqt5gui5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:58.4777424Z Setting up libqmi-proxy (1.24.8-1) ... 2021-05-18T14:13:58.4800272Z Setting up libqt5widgets5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:58.4834985Z Setting up libqt53dcore5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:58.5011783Z Setting up libqt5help5:amd64 (5.12.8-0ubuntu1) ... 2021-05-18T14:13:58.5032259Z Setting up libqt53dlogic5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:58.5057676Z Setting up qt5-gtk-platformtheme:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:58.5082345Z Setting up libqgis-native3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:13:58.5111274Z Setting up libqt5printsupport5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:58.5146814Z Setting up gdal-bin (3.0.4+dfsg-1build3) ... 2021-05-18T14:13:58.6025195Z Setting up qt5-image-formats-plugins:amd64 (5.12.8-0ubuntu1) ... 2021-05-18T14:13:58.6053432Z Setting up libqt53dinput5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:58.6081228Z Setting up libqt5opengl5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:58.6099575Z Setting up modemmanager (1.12.8-1) ... 2021-05-18T14:13:58.7315396Z Created symlink /etc/systemd/system/dbus-org.freedesktop.ModemManager1.service → /lib/systemd/system/ModemManager.service. 2021-05-18T14:13:58.7318517Z Created symlink /etc/systemd/system/multi-user.target.wants/ModemManager.service → /lib/systemd/system/ModemManager.service. 2021-05-18T14:13:59.2795273Z Setting up libqt5quick5:amd64 (5.12.8-0ubuntu1) ... 2021-05-18T14:13:59.2842005Z Setting up libqt5designer5:amd64 (5.12.8-0ubuntu1) ... 2021-05-18T14:13:59.2881059Z Setting up libpdal-plugins (2.0.1+ds-1build3) ... 2021-05-18T14:13:59.2931404Z Setting up libqt5svg5:amd64 (5.12.8-0ubuntu1) ... 2021-05-18T14:13:59.2985903Z Setting up libqt53drender5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:59.3033340Z Setting up qhelpgenerator-qt5 (5.12.8-0ubuntu1) ... 2021-05-18T14:13:59.3076369Z Setting up libqwt-qt5-6 (6.1.4-1.1build1) ... 2021-05-18T14:13:59.3115765Z Setting up libqscintilla2-qt5-15 (2.11.2+dfsg-6) ... 2021-05-18T14:13:59.3202175Z Setting up libqt5webkit5:amd64 (5.212.0~alpha4-1ubuntu2) ... 2021-05-18T14:13:59.3223345Z Setting up libqt5designercomponents5:amd64 (5.12.8-0ubuntu1) ... 2021-05-18T14:13:59.3280143Z Setting up libqt5quickwidgets5:amd64 (5.12.8-0ubuntu1) ... 2021-05-18T14:13:59.3329104Z Setting up libqgis-core3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:13:59.3361900Z Setting up libqt53dquickscene2d5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:59.3405685Z Setting up libqgis-gui3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:13:59.3443001Z Setting up libqgis-analysis3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:13:59.3479347Z Setting up qt5-assistant (5.12.8-0ubuntu1) ... 2021-05-18T14:13:59.3522646Z Setting up qttools5-dev-tools (5.12.8-0ubuntu1) ... 2021-05-18T14:13:59.3553846Z Setting up libqgispython3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:13:59.3586601Z Setting up qt3d-scene2d-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:59.3624648Z Setting up python3-pyqt5 (5.14.1+dfsg-3build1) ... 2021-05-18T14:13:59.5458993Z Setting up python3-pyqt5.qtsvg (5.14.1+dfsg-3build1) ... 2021-05-18T14:13:59.5490534Z Setting up libqt53danimation5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:59.5539339Z Setting up qt3d-defaultgeometryloader-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:13:59.5567683Z Setting up qgis-providers (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:14:30.4619383Z Setting up libqt53dextras5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:14:30.4658251Z Setting up python3-pyqt5.qtsql (5.14.1+dfsg-3build1) ... 2021-05-18T14:14:30.4687552Z Setting up libqgis-customwidgets (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:14:30.4712978Z Setting up qt3d-gltfsceneio-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:14:30.4738570Z Setting up libqgis-server3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:14:30.4765583Z Setting up libqgisgrass7-3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:14:30.4787252Z Setting up qt3d-assimpsceneimport-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-18T14:14:30.4818327Z Setting up python3-qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:14:30.6211664Z Setting up libqgis-3d3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:14:30.6243128Z Setting up python3-pyqt5.qtwebkit (5.14.1+dfsg-3build1) ... 2021-05-18T14:14:30.6278985Z Setting up qgis-provider-grass (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:14:30.6313226Z Setting up python3-pyqt5.qsci (2.11.2+dfsg-6) ... 2021-05-18T14:14:30.6345281Z Setting up python3-qgis (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:14:30.7976280Z Setting up libqgis-app3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:14:30.8003297Z Setting up qgis (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:14:30.8041475Z Setting up qgis-plugin-grass (3.10.4+dfsg-1ubuntu2) ... 2021-05-18T14:14:30.8185323Z Processing triggers for dbus (1.12.16-2ubuntu2.1) ... 2021-05-18T14:14:30.8349487Z Processing triggers for shared-mime-info (1.15-1) ... 2021-05-18T14:14:31.8022455Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-18T14:14:31.8184232Z Processing triggers for mime-support (3.64ubuntu1) ... 2021-05-18T14:14:31.8429530Z Processing triggers for hicolor-icon-theme (0.17-2) ... 2021-05-18T14:14:31.8586702Z Processing triggers for libglib2.0-0:amd64 (2.64.6-1~ubuntu20.04.3) ... 2021-05-18T14:14:31.9289666Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:14:31.9608804Z Processing triggers for systemd (245.4-4ubuntu3.6) ... 2021-05-18T14:14:32.2124728Z Processing triggers for man-db (2.9.1-1) ... 2021-05-18T14:14:43.1430712Z Setting up pinentry-gnome3 (1.1.0-3build1) ... 2021-05-18T14:14:43.1644330Z Setting up gnome-keyring (3.36.0-1ubuntu1) ... 2021-05-18T14:14:45.2275934Z ##[group]Run adigherman/actions/get-repo-name@master 2021-05-18T14:14:45.2276474Z with: 2021-05-18T14:14:45.2276921Z github_slug: neuroconductor/RAVEL 2021-05-18T14:14:45.2277360Z env: 2021-05-18T14:14:45.2277800Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:14:45.2278245Z TIC_DEPLOY_KEY: 2021-05-18T14:14:45.2279026Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:14:45.2280874Z GITHUB_PAT: *** 2021-05-18T14:14:45.2281641Z COVERALLS_TOKEN: *** 2021-05-18T14:14:45.2282123Z continue-on-error: true 2021-05-18T14:14:45.2282576Z VDIFFR_RUN_TESTS: 2021-05-18T14:14:45.2283052Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:14:45.2283491Z TZ: UTC 2021-05-18T14:14:45.2283860Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:14:45.2284270Z NOT_CRAN: true 2021-05-18T14:14:45.2284627Z ##[endgroup] 2021-05-18T14:14:45.2602680Z repo slug is: neuroconductor/RAVEL 2021-05-18T14:14:45.2691223Z ##[group]Run adigherman/actions/get-repo-version@master 2021-05-18T14:14:45.2691771Z env: 2021-05-18T14:14:45.2692176Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:14:45.2692621Z TIC_DEPLOY_KEY: 2021-05-18T14:14:45.2693384Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:14:45.2694594Z GITHUB_PAT: *** 2021-05-18T14:14:45.2695411Z COVERALLS_TOKEN: *** 2021-05-18T14:14:45.2695877Z continue-on-error: true 2021-05-18T14:14:45.2696314Z VDIFFR_RUN_TESTS: 2021-05-18T14:14:45.2696774Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:14:45.2697200Z TZ: UTC 2021-05-18T14:14:45.2697556Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:14:45.2697951Z NOT_CRAN: true 2021-05-18T14:14:45.2698295Z ##[endgroup] 2021-05-18T14:14:45.4583026Z ##[group]Run adigherman/actions/get-release-asset@master 2021-05-18T14:14:45.4583587Z with: 2021-05-18T14:14:45.4583921Z repo_name: RAVEL 2021-05-18T14:14:45.4584303Z repo_version: 1.2.2 2021-05-18T14:14:45.4584671Z runner_os: Linux 2021-05-18T14:14:45.4585012Z R_version: 4.1 2021-05-18T14:14:45.4585338Z env: 2021-05-18T14:14:45.4585731Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:14:45.4586176Z TIC_DEPLOY_KEY: 2021-05-18T14:14:45.4586962Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:14:45.4588579Z GITHUB_PAT: *** 2021-05-18T14:14:45.4589345Z COVERALLS_TOKEN: *** 2021-05-18T14:14:45.4589808Z continue-on-error: true 2021-05-18T14:14:45.4590242Z VDIFFR_RUN_TESTS: 2021-05-18T14:14:45.4590701Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:14:45.4591113Z TZ: UTC 2021-05-18T14:14:45.4591479Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:14:45.4591874Z NOT_CRAN: true 2021-05-18T14:14:45.4592239Z ##[endgroup] 2021-05-18T14:14:45.4918737Z Package: RAVEL 2021-05-18T14:14:45.4921464Z Version: 1.2.2 2021-05-18T14:14:45.4922123Z OS: Linux 2021-05-18T14:14:45.4974583Z ##[group]Run install.packages('remotes') 2021-05-18T14:14:45.4975256Z install.packages('remotes') 2021-05-18T14:14:45.4976034Z saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) 2021-05-18T14:14:45.4977002Z writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") 2021-05-18T14:14:45.4983823Z shell: /usr/local/bin/Rscript {0} 2021-05-18T14:14:45.4984218Z env: 2021-05-18T14:14:45.4984649Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:14:45.4985113Z TIC_DEPLOY_KEY: 2021-05-18T14:14:45.4985880Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:14:45.4987134Z GITHUB_PAT: *** 2021-05-18T14:14:45.4987908Z COVERALLS_TOKEN: *** 2021-05-18T14:14:45.4988372Z continue-on-error: true 2021-05-18T14:14:45.4988834Z VDIFFR_RUN_TESTS: 2021-05-18T14:14:45.4989291Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:14:45.4989751Z TZ: UTC 2021-05-18T14:14:45.4990113Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:14:45.4990515Z NOT_CRAN: true 2021-05-18T14:14:45.4990869Z ##[endgroup] 2021-05-18T14:14:45.6781890Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:14:45.6783350Z (as ‘lib’ is unspecified) 2021-05-18T14:15:00.2996744Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/remotes_2.3.0.tar.gz' 2021-05-18T14:15:00.5691370Z Content type 'binary/octet-stream' length 148709 bytes (145 KB) 2021-05-18T14:15:00.5800798Z ================================================== 2021-05-18T14:15:00.5801556Z downloaded 145 KB 2021-05-18T14:15:00.5801985Z 2021-05-18T14:15:00.8664395Z * installing *source* package ‘remotes’ ... 2021-05-18T14:15:00.8704849Z ** package ‘remotes’ successfully unpacked and MD5 sums checked 2021-05-18T14:15:00.8705969Z ** using staged installation 2021-05-18T14:15:00.8869351Z ** R 2021-05-18T14:15:00.9055177Z ** inst 2021-05-18T14:15:00.9065958Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:15:02.7240376Z ** help 2021-05-18T14:15:02.8087581Z *** installing help indices 2021-05-18T14:15:02.8677247Z ** building package indices 2021-05-18T14:15:03.1000492Z ** installing vignettes 2021-05-18T14:15:03.1033576Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:15:03.2789180Z ** testing if installed package can be loaded from final location 2021-05-18T14:15:03.4870257Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:15:03.4892072Z * DONE (remotes) 2021-05-18T14:15:03.4987563Z 2021-05-18T14:15:03.4988791Z The downloaded source packages are in 2021-05-18T14:15:03.4990554Z ‘/tmp/RtmpF50Fo3/downloaded_packages’ 2021-05-18T14:15:21.6754639Z ##[group]Run actions/cache@v1 2021-05-18T14:15:21.6755109Z with: 2021-05-18T14:15:21.6755573Z path: /home/runner/work/_temp/Library 2021-05-18T14:15:21.6758812Z key: Linux-e3adb7ee20b68d8bd651f6f30d4cc1690a70853cf8f0c4dcbc5c14b00f693a6a-1-228ae95d80bc420def950517779ac19204f77b70f69d7760da840cc9c5fdd414 2021-05-18T14:15:21.6762889Z restore-keys: Linux-e3adb7ee20b68d8bd651f6f30d4cc1690a70853cf8f0c4dcbc5c14b00f693a6a-1- 2021-05-18T14:15:21.6764076Z env: 2021-05-18T14:15:21.6764494Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:15:21.6764945Z TIC_DEPLOY_KEY: 2021-05-18T14:15:21.6765759Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:15:21.6767474Z GITHUB_PAT: *** 2021-05-18T14:15:21.6768241Z COVERALLS_TOKEN: *** 2021-05-18T14:15:21.6768697Z continue-on-error: true 2021-05-18T14:15:21.6769150Z VDIFFR_RUN_TESTS: 2021-05-18T14:15:21.6769602Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:15:21.6770090Z TZ: UTC 2021-05-18T14:15:21.6770446Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:15:21.6770841Z NOT_CRAN: true 2021-05-18T14:15:21.6771188Z ##[endgroup] 2021-05-18T14:15:21.7191748Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-05-18T14:15:21.7272111Z ##[group]Run Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-05-18T14:15:21.7272906Z Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-05-18T14:15:21.7273630Z sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") 2021-05-18T14:15:21.7274330Z sudo -s eval "$sysreqs" 2021-05-18T14:15:21.7317076Z shell: /usr/bin/bash -e {0} 2021-05-18T14:15:21.7317445Z env: 2021-05-18T14:15:21.7317863Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:15:21.7318308Z TIC_DEPLOY_KEY: 2021-05-18T14:15:21.7319083Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:15:21.7320545Z GITHUB_PAT: *** 2021-05-18T14:15:21.7321315Z COVERALLS_TOKEN: *** 2021-05-18T14:15:21.7321768Z continue-on-error: true 2021-05-18T14:15:21.7322218Z VDIFFR_RUN_TESTS: 2021-05-18T14:15:21.7322665Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:15:21.7323091Z TZ: UTC 2021-05-18T14:15:21.7323471Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:15:21.7323860Z NOT_CRAN: true 2021-05-18T14:15:21.7324297Z RHUB_PLATFORM: linux-x86_64-ubuntu-gcc 2021-05-18T14:15:21.7324751Z ##[endgroup] 2021-05-18T14:15:21.9235949Z Using github PAT from envvar GITHUB_PAT 2021-05-18T14:15:22.3187059Z Downloading GitHub repo r-hub/sysreqs@HEAD 2021-05-18T14:15:37.8116922Z rprojroot (NA -> 2.0.2) [CRAN] 2021-05-18T14:15:37.8118391Z crayon (NA -> 1.4.1) [CRAN] 2021-05-18T14:15:37.8120842Z R6 (NA -> 2.5.0) [CRAN] 2021-05-18T14:15:37.8123438Z desc (NA -> 1.3.0) [CRAN] 2021-05-18T14:15:37.8124093Z debugme (NA -> 1.1.0) [CRAN] 2021-05-18T14:15:37.8145638Z Installing 5 packages: rprojroot, crayon, R6, desc, debugme 2021-05-18T14:15:37.8157669Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:15:37.8158541Z (as ‘lib’ is unspecified) 2021-05-18T14:15:52.1362091Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rprojroot_2.0.2.tar.gz' 2021-05-18T14:15:52.4216641Z Content type 'binary/octet-stream' length 61445 bytes (60 KB) 2021-05-18T14:15:52.4271547Z ================================================== 2021-05-18T14:15:52.4272414Z downloaded 60 KB 2021-05-18T14:15:52.4272933Z 2021-05-18T14:15:52.4308117Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/crayon_1.4.1.tar.gz' 2021-05-18T14:15:52.6004037Z Content type 'binary/octet-stream' length 35834 bytes (34 KB) 2021-05-18T14:15:52.6012300Z ================================================== 2021-05-18T14:15:52.6013107Z downloaded 34 KB 2021-05-18T14:15:52.6013582Z 2021-05-18T14:15:52.6047966Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R6_2.5.0.tar.gz' 2021-05-18T14:15:52.8845431Z Content type 'binary/octet-stream' length 64110 bytes (62 KB) 2021-05-18T14:15:52.8899237Z ================================================== 2021-05-18T14:15:52.8899764Z downloaded 62 KB 2021-05-18T14:15:52.8900026Z 2021-05-18T14:15:52.8938780Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/desc_1.3.0.tar.gz' 2021-05-18T14:15:53.1680474Z Content type 'binary/octet-stream' length 292756 bytes (285 KB) 2021-05-18T14:15:53.1846941Z ================================================== 2021-05-18T14:15:53.1847943Z downloaded 285 KB 2021-05-18T14:15:53.1848445Z 2021-05-18T14:15:53.1883884Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/debugme_1.1.0.tar.gz' 2021-05-18T14:15:53.4615397Z Content type 'application/x-tar' length 997019 bytes (973 KB) 2021-05-18T14:15:53.4881405Z ================================================== 2021-05-18T14:15:53.4882567Z downloaded 973 KB 2021-05-18T14:15:53.4883092Z 2021-05-18T14:15:53.7351702Z * installing *source* package ‘rprojroot’ ... 2021-05-18T14:15:53.7374326Z ** package ‘rprojroot’ successfully unpacked and MD5 sums checked 2021-05-18T14:15:53.7375525Z ** using staged installation 2021-05-18T14:15:53.7508639Z ** R 2021-05-18T14:15:53.7553308Z ** inst 2021-05-18T14:15:53.7562466Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:15:54.2280378Z ** help 2021-05-18T14:15:54.2526583Z *** installing help indices 2021-05-18T14:15:54.2797910Z *** copying figures 2021-05-18T14:15:54.2802512Z ** building package indices 2021-05-18T14:15:54.4758104Z ** installing vignettes 2021-05-18T14:15:54.4814355Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:15:54.6574797Z ** testing if installed package can be loaded from final location 2021-05-18T14:15:54.8391491Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:15:54.8400512Z * DONE (rprojroot) 2021-05-18T14:15:55.0771514Z * installing *source* package ‘crayon’ ... 2021-05-18T14:15:55.0790809Z ** package ‘crayon’ successfully unpacked and MD5 sums checked 2021-05-18T14:15:55.0791936Z ** using staged installation 2021-05-18T14:15:55.0922550Z ** R 2021-05-18T14:15:55.1010419Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:15:55.9361057Z ** help 2021-05-18T14:15:55.9890495Z *** installing help indices 2021-05-18T14:15:56.0266031Z ** building package indices 2021-05-18T14:15:56.2495844Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:15:56.4293679Z ** testing if installed package can be loaded from final location 2021-05-18T14:15:56.6176979Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:15:56.6186858Z * DONE (crayon) 2021-05-18T14:15:56.8474100Z * installing *source* package ‘R6’ ... 2021-05-18T14:15:56.8488721Z ** package ‘R6’ successfully unpacked and MD5 sums checked 2021-05-18T14:15:56.8489774Z ** using staged installation 2021-05-18T14:15:56.8616670Z ** R 2021-05-18T14:15:56.8682535Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:15:57.3520442Z ** help 2021-05-18T14:15:57.3679106Z *** installing help indices 2021-05-18T14:15:57.3871717Z *** copying figures 2021-05-18T14:15:57.3875396Z ** building package indices 2021-05-18T14:15:57.5793111Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:15:57.7561930Z ** testing if installed package can be loaded from final location 2021-05-18T14:15:57.9343123Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:15:57.9351414Z * DONE (R6) 2021-05-18T14:15:58.2384333Z * installing *source* package ‘desc’ ... 2021-05-18T14:15:58.2434063Z ** package ‘desc’ successfully unpacked and MD5 sums checked 2021-05-18T14:15:58.2436067Z ** using staged installation 2021-05-18T14:15:58.2588564Z ** R 2021-05-18T14:15:58.2713020Z ** inst 2021-05-18T14:15:58.2729533Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:15:59.8202668Z ** help 2021-05-18T14:15:59.9454749Z *** installing help indices 2021-05-18T14:16:00.0332914Z ** building package indices 2021-05-18T14:16:00.3001846Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:16:00.4859187Z ** testing if installed package can be loaded from final location 2021-05-18T14:16:00.6971857Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:16:00.6990761Z * DONE (desc) 2021-05-18T14:16:00.9490202Z * installing *source* package ‘debugme’ ... 2021-05-18T14:16:00.9522596Z ** package ‘debugme’ successfully unpacked and MD5 sums checked 2021-05-18T14:16:00.9523849Z ** using staged installation 2021-05-18T14:16:00.9629131Z ** R 2021-05-18T14:16:00.9659052Z ** inst 2021-05-18T14:16:00.9679753Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:16:01.2746025Z ** help 2021-05-18T14:16:01.2878589Z *** installing help indices 2021-05-18T14:16:01.3092516Z ** building package indices 2021-05-18T14:16:01.4936083Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:16:01.6734065Z ** testing if installed package can be loaded from final location 2021-05-18T14:16:01.8516762Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:16:01.8523184Z * DONE (debugme) 2021-05-18T14:16:01.8597996Z 2021-05-18T14:16:01.8598825Z The downloaded source packages are in 2021-05-18T14:16:01.8600406Z ‘/tmp/Rtmp9HG1cT/downloaded_packages’ 2021-05-18T14:16:01.8601130Z Running `R CMD build`... 2021-05-18T14:16:02.0958392Z * checking for file ‘/tmp/Rtmp9HG1cT/remotes6a811ad126df/r-hub-sysreqs-f068afa/DESCRIPTION’ ... OK 2021-05-18T14:16:02.0960301Z * preparing ‘sysreqs’: 2021-05-18T14:16:02.0961426Z * checking DESCRIPTION meta-information ... OK 2021-05-18T14:16:02.0962638Z * checking for LF line-endings in source and make files and shell scripts 2021-05-18T14:16:02.0963593Z * checking for empty or unneeded directories 2021-05-18T14:16:02.0964537Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-18T14:16:02.0965445Z * building ‘sysreqs_1.0.0.9000.tar.gz’ 2021-05-18T14:16:02.0966566Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:16:02.0967470Z (as ‘lib’ is unspecified) 2021-05-18T14:16:02.2995114Z * installing *source* package ‘sysreqs’ ... 2021-05-18T14:16:02.2996745Z ** using staged installation 2021-05-18T14:16:02.3123730Z ** R 2021-05-18T14:16:02.3156415Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:16:02.6708557Z ** help 2021-05-18T14:16:02.6920764Z *** installing help indices 2021-05-18T14:16:02.7088721Z ** building package indices 2021-05-18T14:16:02.9007765Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:16:03.0952487Z ** testing if installed package can be loaded from final location 2021-05-18T14:16:03.2886669Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:16:03.2893229Z * DONE (sysreqs) 2021-05-18T14:16:19.9754364Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-05-18T14:16:19.9756288Z Hit:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease 2021-05-18T14:16:19.9757695Z Hit:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease 2021-05-18T14:16:20.0175474Z Get:4 http://security.ubuntu.com/ubuntu focal-security InRelease [109 kB] 2021-05-18T14:16:20.0965531Z Hit:5 https://download.mono-project.com/repo/ubuntu stable-focal InRelease 2021-05-18T14:16:20.1126968Z Hit:6 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease 2021-05-18T14:16:21.0217114Z Hit:7 http://ppa.launchpad.net/apt-fast/stable/ubuntu focal InRelease 2021-05-18T14:16:21.0226815Z Hit:8 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease 2021-05-18T14:16:21.0228749Z Hit:9 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-05-18T14:16:21.0229900Z Fetched 109 kB in 1s (123 kB/s) 2021-05-18T14:16:21.7296331Z Reading package lists... 2021-05-18T14:16:21.8032991Z Reading package lists... 2021-05-18T14:16:21.9864145Z Building dependency tree... 2021-05-18T14:16:21.9886737Z Reading state information... 2021-05-18T14:16:22.1606365Z libicu-dev is already the newest version (66.1-2ubuntu2). 2021-05-18T14:16:22.1608032Z libicu-dev set to manually installed. 2021-05-18T14:16:22.1609257Z libssl-dev is already the newest version (1.1.1f-1ubuntu2.3). 2021-05-18T14:16:22.1610404Z pandoc is already the newest version (2.7.3-1). 2021-05-18T14:16:22.1611336Z The following additional packages will be installed: 2021-05-18T14:16:22.1612668Z libbibutils6 libghc-pandoc-citeproc-data 2021-05-18T14:16:22.1616290Z Suggested packages: 2021-05-18T14:16:22.1617410Z libcurl4-doc libidn11-dev libldap2-dev librtmp-dev 2021-05-18T14:16:22.2097300Z The following NEW packages will be installed: 2021-05-18T14:16:22.2107444Z libbibutils6 libcurl4-openssl-dev libghc-pandoc-citeproc-data 2021-05-18T14:16:22.2112895Z pandoc-citeproc 2021-05-18T14:16:22.2432057Z 0 upgraded, 4 newly installed, 0 to remove and 35 not upgraded. 2021-05-18T14:16:22.2433144Z Need to get 13.7 MB of archives. 2021-05-18T14:16:22.2434168Z After this operation, 109 MB of additional disk space will be used. 2021-05-18T14:16:22.2436315Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbibutils6 amd64 6.2-1 [365 kB] 2021-05-18T14:16:22.2619310Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcurl4-openssl-dev amd64 7.68.0-1ubuntu2.5 [321 kB] 2021-05-18T14:16:22.2671760Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libghc-pandoc-citeproc-data all 0.15.0.1-1build4 [51.1 kB] 2021-05-18T14:16:22.2753580Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 pandoc-citeproc amd64 0.15.0.1-1build4 [12.9 MB] 2021-05-18T14:16:23.2162781Z Fetched 13.7 MB in 1s (24.2 MB/s) 2021-05-18T14:16:23.2522985Z Selecting previously unselected package libbibutils6. 2021-05-18T14:16:23.2614942Z (Reading database ... 2021-05-18T14:16:23.2615697Z (Reading database ... 5% 2021-05-18T14:16:23.2616264Z (Reading database ... 10% 2021-05-18T14:16:23.2616830Z (Reading database ... 15% 2021-05-18T14:16:23.2617397Z (Reading database ... 20% 2021-05-18T14:16:23.2617939Z (Reading database ... 25% 2021-05-18T14:16:23.2618496Z (Reading database ... 30% 2021-05-18T14:16:23.2619080Z (Reading database ... 35% 2021-05-18T14:16:23.2619619Z (Reading database ... 40% 2021-05-18T14:16:23.2620181Z (Reading database ... 45% 2021-05-18T14:16:23.2621408Z (Reading database ... 50% 2021-05-18T14:16:23.2669645Z (Reading database ... 55% 2021-05-18T14:16:23.2728298Z (Reading database ... 60% 2021-05-18T14:16:23.2777679Z (Reading database ... 65% 2021-05-18T14:16:23.2895653Z (Reading database ... 70% 2021-05-18T14:16:23.3029043Z (Reading database ... 75% 2021-05-18T14:16:23.3324025Z (Reading database ... 80% 2021-05-18T14:16:23.3436161Z (Reading database ... 85% 2021-05-18T14:16:23.3895746Z (Reading database ... 90% 2021-05-18T14:16:23.3989353Z (Reading database ... 95% 2021-05-18T14:16:23.3990025Z (Reading database ... 100% 2021-05-18T14:16:23.3990871Z (Reading database ... 285139 files and directories currently installed.) 2021-05-18T14:16:23.4140063Z Preparing to unpack .../libbibutils6_6.2-1_amd64.deb ... 2021-05-18T14:16:23.4160781Z Unpacking libbibutils6 (6.2-1) ... 2021-05-18T14:16:23.4882729Z Selecting previously unselected package libcurl4-openssl-dev:amd64. 2021-05-18T14:16:23.5177401Z Preparing to unpack .../libcurl4-openssl-dev_7.68.0-1ubuntu2.5_amd64.deb ... 2021-05-18T14:16:23.5192072Z Unpacking libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-05-18T14:16:23.5761766Z Selecting previously unselected package libghc-pandoc-citeproc-data. 2021-05-18T14:16:23.6026137Z Preparing to unpack .../libghc-pandoc-citeproc-data_0.15.0.1-1build4_all.deb ... 2021-05-18T14:16:23.6041984Z Unpacking libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-05-18T14:16:23.6481593Z Selecting previously unselected package pandoc-citeproc. 2021-05-18T14:16:23.6717549Z Preparing to unpack .../pandoc-citeproc_0.15.0.1-1build4_amd64.deb ... 2021-05-18T14:16:23.6729981Z Unpacking pandoc-citeproc (0.15.0.1-1build4) ... 2021-05-18T14:16:23.6763846Z Replaced by files in installed package pandoc (2.7.3-1) ... 2021-05-18T14:16:25.0157428Z Setting up libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-05-18T14:16:25.0188697Z Setting up libbibutils6 (6.2-1) ... 2021-05-18T14:16:25.0215204Z Setting up libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-05-18T14:16:25.0241087Z Setting up pandoc-citeproc (0.15.0.1-1build4) ... 2021-05-18T14:16:25.0273932Z Processing triggers for man-db (2.9.1-1) ... 2021-05-18T14:16:28.2550521Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-18T14:16:30.4091958Z ##[group]Run remotes::install_github("ropensci/tic") 2021-05-18T14:16:30.4092644Z remotes::install_github("ropensci/tic") 2021-05-18T14:16:30.4093288Z remotes::install_github("muschellij2/ghtravis") 2021-05-18T14:16:30.4093961Z remotes::install_github("muschellij2/aghast") 2021-05-18T14:16:30.4094548Z remotes::install_cran("covr") 2021-05-18T14:16:30.4101355Z shell: /usr/local/bin/Rscript {0} 2021-05-18T14:16:30.4101755Z env: 2021-05-18T14:16:30.4102227Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:16:30.4102686Z TIC_DEPLOY_KEY: 2021-05-18T14:16:30.4103477Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:16:30.4105264Z GITHUB_PAT: *** 2021-05-18T14:16:30.4106153Z COVERALLS_TOKEN: *** 2021-05-18T14:16:30.4106639Z continue-on-error: true 2021-05-18T14:16:30.4107099Z VDIFFR_RUN_TESTS: 2021-05-18T14:16:30.4107698Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:16:30.4108166Z TZ: UTC 2021-05-18T14:16:30.4108552Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:16:30.4108961Z NOT_CRAN: true 2021-05-18T14:16:30.4109319Z ##[endgroup] 2021-05-18T14:16:30.5971167Z Using github PAT from envvar GITHUB_PAT 2021-05-18T14:16:31.1527768Z Downloading GitHub repo ropensci/tic@HEAD 2021-05-18T14:16:47.1909167Z rlang (NA -> 0.4.11) [CRAN] 2021-05-18T14:16:47.1910487Z magrittr (NA -> 2.0.1 ) [CRAN] 2021-05-18T14:16:47.1912272Z glue (NA -> 1.4.2 ) [CRAN] 2021-05-18T14:16:47.1913199Z sys (NA -> 3.4 ) [CRAN] 2021-05-18T14:16:47.1914014Z askpass (NA -> 1.1 ) [CRAN] 2021-05-18T14:16:47.1914840Z openssl (NA -> 1.4.4 ) [CRAN] 2021-05-18T14:16:47.1915652Z mime (NA -> 0.10 ) [CRAN] 2021-05-18T14:16:47.1916427Z curl (NA -> 4.3.1 ) [CRAN] 2021-05-18T14:16:47.1917238Z jsonlite (NA -> 1.7.2 ) [CRAN] 2021-05-18T14:16:47.1918050Z ini (NA -> 0.3.1 ) [CRAN] 2021-05-18T14:16:47.1918852Z httr (NA -> 1.4.2 ) [CRAN] 2021-05-18T14:16:47.1919857Z gitcreds (NA -> 0.1.1 ) [CRAN] 2021-05-18T14:16:47.1920693Z cli (NA -> 2.5.0 ) [CRAN] 2021-05-18T14:16:47.1921461Z zip (NA -> 2.1.1 ) [CRAN] 2021-05-18T14:16:47.1922283Z rstudioapi (NA -> 0.13 ) [CRAN] 2021-05-18T14:16:47.1923138Z credentials (NA -> 1.3.0 ) [CRAN] 2021-05-18T14:16:47.1923978Z fastmap (NA -> 1.1.0 ) [CRAN] 2021-05-18T14:16:47.1924786Z yaml (NA -> 2.2.1 ) [CRAN] 2021-05-18T14:16:47.1925573Z withr (NA -> 2.4.2 ) [CRAN] 2021-05-18T14:16:47.1926373Z whisker (NA -> 0.4 ) [CRAN] 2021-05-18T14:16:47.1927203Z rappdirs (NA -> 0.3.3 ) [CRAN] 2021-05-18T14:16:47.1928024Z purrr (NA -> 0.3.4 ) [CRAN] 2021-05-18T14:16:47.1928838Z lifecycle (NA -> 1.0.0 ) [CRAN] 2021-05-18T14:16:47.1929661Z gh (NA -> 1.3.0 ) [CRAN] 2021-05-18T14:16:47.1930452Z gert (NA -> 1.3.0 ) [CRAN] 2021-05-18T14:16:47.1931215Z fs (NA -> 1.5.0 ) [CRAN] 2021-05-18T14:16:47.1932007Z clipr (NA -> 0.7.1 ) [CRAN] 2021-05-18T14:16:47.1932818Z cachem (NA -> 1.0.5 ) [CRAN] 2021-05-18T14:16:47.1933602Z usethis (NA -> 2.0.1 ) [CRAN] 2021-05-18T14:16:47.1934421Z memoise (NA -> 2.0.0 ) [CRAN] 2021-05-18T14:16:47.1935228Z git2r (NA -> 0.28.0) [CRAN] 2021-05-18T14:16:47.2022397Z Installing 31 packages: rlang, magrittr, glue, sys, askpass, openssl, mime, curl, jsonlite, ini, httr, gitcreds, cli, zip, rstudioapi, credentials, fastmap, yaml, withr, whisker, rappdirs, purrr, lifecycle, gh, gert, fs, clipr, cachem, usethis, memoise, git2r 2021-05-18T14:16:47.2031624Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:16:47.2032405Z (as ‘lib’ is unspecified) 2021-05-18T14:17:01.7671402Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rlang_0.4.11.tar.gz' 2021-05-18T14:17:02.0497971Z Content type 'binary/octet-stream' length 859995 bytes (839 KB) 2021-05-18T14:17:02.0750166Z ================================================== 2021-05-18T14:17:02.0750772Z downloaded 839 KB 2021-05-18T14:17:02.0751267Z 2021-05-18T14:17:02.0790774Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/magrittr_2.0.1.tar.gz' 2021-05-18T14:17:02.3576872Z Content type 'binary/octet-stream' length 264532 bytes (258 KB) 2021-05-18T14:17:02.3734741Z ================================================== 2021-05-18T14:17:02.3736027Z downloaded 258 KB 2021-05-18T14:17:02.3736392Z 2021-05-18T14:17:02.3772640Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/glue_1.4.2.tar.gz' 2021-05-18T14:17:02.6616955Z Content type 'binary/octet-stream' length 100043 bytes (97 KB) 2021-05-18T14:17:02.6722715Z ================================================== 2021-05-18T14:17:02.6723342Z downloaded 97 KB 2021-05-18T14:17:02.6723626Z 2021-05-18T14:17:02.6765901Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sys_3.4.tar.gz' 2021-05-18T14:17:02.8663397Z Content type 'binary/octet-stream' length 20291 bytes (19 KB) 2021-05-18T14:17:02.8665790Z ================================================== 2021-05-18T14:17:02.8667697Z downloaded 19 KB 2021-05-18T14:17:02.8668341Z 2021-05-18T14:17:02.8707947Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/askpass_1.1.tar.gz' 2021-05-18T14:17:03.2630680Z Content type 'application/x-tar' length 5688 bytes 2021-05-18T14:17:03.2631486Z ================================================== 2021-05-18T14:17:03.2631972Z downloaded 5688 bytes 2021-05-18T14:17:03.2632294Z 2021-05-18T14:17:03.2672180Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/openssl_1.4.4.tar.gz' 2021-05-18T14:17:03.4396214Z Content type 'binary/octet-stream' length 1311683 bytes (1.3 MB) 2021-05-18T14:17:03.4705781Z ================================================== 2021-05-18T14:17:03.4706353Z downloaded 1.3 MB 2021-05-18T14:17:03.4706633Z 2021-05-18T14:17:03.4747460Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/mime_0.10.tar.gz' 2021-05-18T14:17:03.7428071Z Content type 'binary/octet-stream' length 12958 bytes (12 KB) 2021-05-18T14:17:03.7428790Z ================================================== 2021-05-18T14:17:03.7429198Z downloaded 12 KB 2021-05-18T14:17:03.7429466Z 2021-05-18T14:17:03.7468949Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/curl_4.3.1.tar.gz' 2021-05-18T14:17:03.9162645Z Content type 'binary/octet-stream' length 798588 bytes (779 KB) 2021-05-18T14:17:03.9424661Z ================================================== 2021-05-18T14:17:03.9425229Z downloaded 779 KB 2021-05-18T14:17:03.9425505Z 2021-05-18T14:17:03.9466407Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/jsonlite_1.7.2.tar.gz' 2021-05-18T14:17:04.1183252Z Content type 'binary/octet-stream' length 422264 bytes (412 KB) 2021-05-18T14:17:04.1379338Z ================================================== 2021-05-18T14:17:04.1379927Z downloaded 412 KB 2021-05-18T14:17:04.1380204Z 2021-05-18T14:17:04.1420618Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ini_0.3.1.tar.gz' 2021-05-18T14:17:04.4243448Z Content type 'application/x-tar' length 3475 bytes 2021-05-18T14:17:04.4244139Z ================================================== 2021-05-18T14:17:04.4244751Z downloaded 3475 bytes 2021-05-18T14:17:04.4245039Z 2021-05-18T14:17:04.4286968Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/httr_1.4.2.tar.gz' 2021-05-18T14:17:04.6188961Z Content type 'binary/octet-stream' length 159877 bytes (156 KB) 2021-05-18T14:17:04.6311978Z ================================================== 2021-05-18T14:17:04.6312520Z downloaded 156 KB 2021-05-18T14:17:04.6312797Z 2021-05-18T14:17:04.6353476Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gitcreds_0.1.1.tar.gz' 2021-05-18T14:17:05.0218067Z Content type 'binary/octet-stream' length 62129 bytes (60 KB) 2021-05-18T14:17:05.0270476Z ================================================== 2021-05-18T14:17:05.0271001Z downloaded 60 KB 2021-05-18T14:17:05.0271280Z 2021-05-18T14:17:05.0310928Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cli_2.5.0.tar.gz' 2021-05-18T14:17:05.2200883Z Content type 'binary/octet-stream' length 158132 bytes (154 KB) 2021-05-18T14:17:05.2322045Z ================================================== 2021-05-18T14:17:05.2322930Z downloaded 154 KB 2021-05-18T14:17:05.2323497Z 2021-05-18T14:17:05.2364774Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/zip_2.1.1.tar.gz' 2021-05-18T14:17:05.6249852Z Content type 'binary/octet-stream' length 113091 bytes (110 KB) 2021-05-18T14:17:05.6303411Z ================================================== 2021-05-18T14:17:05.6304005Z downloaded 110 KB 2021-05-18T14:17:05.6304324Z 2021-05-18T14:17:05.6346473Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rstudioapi_0.13.tar.gz' 2021-05-18T14:17:05.9164384Z Content type 'binary/octet-stream' length 109870 bytes (107 KB) 2021-05-18T14:17:05.9273507Z ================================================== 2021-05-18T14:17:05.9274626Z downloaded 107 KB 2021-05-18T14:17:05.9275076Z 2021-05-18T14:17:05.9315648Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/credentials_1.3.0.tar.gz' 2021-05-18T14:17:06.3161223Z Content type 'binary/octet-stream' length 230676 bytes (225 KB) 2021-05-18T14:17:06.3361890Z ================================================== 2021-05-18T14:17:06.3363073Z downloaded 225 KB 2021-05-18T14:17:06.3363579Z 2021-05-18T14:17:06.3400291Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fastmap_1.1.0.tar.gz' 2021-05-18T14:17:06.5160826Z Content type 'binary/octet-stream' length 44517 bytes (43 KB) 2021-05-18T14:17:06.5210673Z ================================================== 2021-05-18T14:17:06.5211218Z downloaded 43 KB 2021-05-18T14:17:06.5211512Z 2021-05-18T14:17:06.5250978Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/yaml_2.2.1.tar.gz' 2021-05-18T14:17:06.7981062Z Content type 'binary/octet-stream' length 92979 bytes (90 KB) 2021-05-18T14:17:06.8055153Z ================================================== 2021-05-18T14:17:06.8055693Z downloaded 90 KB 2021-05-18T14:17:06.8055975Z 2021-05-18T14:17:06.8097318Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/withr_2.4.2.tar.gz' 2021-05-18T14:17:07.1957143Z Content type 'binary/octet-stream' length 95150 bytes (92 KB) 2021-05-18T14:17:07.2027170Z ================================================== 2021-05-18T14:17:07.2027820Z downloaded 92 KB 2021-05-18T14:17:07.2028381Z 2021-05-18T14:17:07.2069022Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/whisker_0.4.tar.gz' 2021-05-18T14:17:07.4748613Z Content type 'application/x-tar' length 28675 bytes (28 KB) 2021-05-18T14:17:07.4751435Z ================================================== 2021-05-18T14:17:07.4752288Z downloaded 28 KB 2021-05-18T14:17:07.4752658Z 2021-05-18T14:17:07.4796003Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rappdirs_0.3.3.tar.gz' 2021-05-18T14:17:07.8721266Z Content type 'binary/octet-stream' length 12326 bytes (12 KB) 2021-05-18T14:17:07.8723634Z ================================================== 2021-05-18T14:17:07.8724158Z downloaded 12 KB 2021-05-18T14:17:07.8724468Z 2021-05-18T14:17:07.8764167Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/purrr_0.3.4.tar.gz' 2021-05-18T14:17:08.1348480Z Content type 'binary/octet-stream' length 373001 bytes (364 KB) 2021-05-18T14:17:08.1536490Z ================================================== 2021-05-18T14:17:08.1537051Z downloaded 364 KB 2021-05-18T14:17:08.1537329Z 2021-05-18T14:17:08.1577795Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lifecycle_1.0.0.tar.gz' 2021-05-18T14:17:08.4419460Z Content type 'binary/octet-stream' length 83493 bytes (81 KB) 2021-05-18T14:17:08.4484550Z ================================================== 2021-05-18T14:17:08.4485039Z downloaded 81 KB 2021-05-18T14:17:08.4485318Z 2021-05-18T14:17:08.4524366Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gh_1.3.0.tar.gz' 2021-05-18T14:17:08.6366639Z Content type 'binary/octet-stream' length 45853 bytes (44 KB) 2021-05-18T14:17:08.6416681Z ================================================== 2021-05-18T14:17:08.6417675Z downloaded 44 KB 2021-05-18T14:17:08.6418193Z 2021-05-18T14:17:08.6455133Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gert_1.3.0.tar.gz' 2021-05-18T14:17:08.9185090Z Content type 'binary/octet-stream' length 66528 bytes (64 KB) 2021-05-18T14:17:08.9247485Z ================================================== 2021-05-18T14:17:08.9248479Z downloaded 64 KB 2021-05-18T14:17:08.9249007Z 2021-05-18T14:17:08.9288425Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fs_1.5.0.tar.gz' 2021-05-18T14:17:09.3167058Z Content type 'binary/octet-stream' length 800044 bytes (781 KB) 2021-05-18T14:17:09.3415114Z ================================================== 2021-05-18T14:17:09.3416196Z downloaded 781 KB 2021-05-18T14:17:09.3416641Z 2021-05-18T14:17:09.3451773Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/clipr_0.7.1.tar.gz' 2021-05-18T14:17:09.7390982Z Content type 'binary/octet-stream' length 20919 bytes (20 KB) 2021-05-18T14:17:09.7392507Z ================================================== 2021-05-18T14:17:09.7393194Z downloaded 20 KB 2021-05-18T14:17:09.7393687Z 2021-05-18T14:17:09.7432146Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cachem_1.0.5.tar.gz' 2021-05-18T14:17:09.9275868Z Content type 'binary/octet-stream' length 24954 bytes (24 KB) 2021-05-18T14:17:09.9277235Z ================================================== 2021-05-18T14:17:09.9277863Z downloaded 24 KB 2021-05-18T14:17:09.9278273Z 2021-05-18T14:17:09.9314376Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/usethis_2.0.1.tar.gz' 2021-05-18T14:17:10.1192163Z Content type 'binary/octet-stream' length 304209 bytes (297 KB) 2021-05-18T14:17:10.1369265Z ================================================== 2021-05-18T14:17:10.1369827Z downloaded 297 KB 2021-05-18T14:17:10.1370097Z 2021-05-18T14:17:10.1410629Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/memoise_2.0.0.tar.gz' 2021-05-18T14:17:10.4319300Z Content type 'binary/octet-stream' length 17411 bytes (17 KB) 2021-05-18T14:17:10.4321589Z ================================================== 2021-05-18T14:17:10.4322032Z downloaded 17 KB 2021-05-18T14:17:10.4322307Z 2021-05-18T14:17:10.4362073Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/git2r_0.28.0.tar.gz' 2021-05-18T14:17:10.6049430Z Content type 'binary/octet-stream' length 1223574 bytes (1.2 MB) 2021-05-18T14:17:10.6354115Z ================================================== 2021-05-18T14:17:10.6355207Z downloaded 1.2 MB 2021-05-18T14:17:10.6355789Z 2021-05-18T14:17:11.1431855Z * installing *source* package ‘rlang’ ... 2021-05-18T14:17:11.1564702Z ** package ‘rlang’ successfully unpacked and MD5 sums checked 2021-05-18T14:17:11.1565521Z ** using staged installation 2021-05-18T14:17:11.1760731Z ** libs 2021-05-18T14:17:11.1829556Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c capture.c -o capture.o 2021-05-18T14:17:11.2920207Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c export.c -o export.o 2021-05-18T14:17:11.6055337Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c internal.c -o internal.o 2021-05-18T14:17:13.8251121Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c lib.c -o lib.o 2021-05-18T14:17:14.7930787Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-18T14:17:14.8320123Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o version.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:17:14.8841787Z installing to /home/runner/work/_temp/Library/00LOCK-rlang/00new/rlang/libs 2021-05-18T14:17:14.8846539Z ** R 2021-05-18T14:17:14.9293064Z ** inst 2021-05-18T14:17:14.9302925Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:17:18.3918674Z ** help 2021-05-18T14:17:19.1153660Z *** installing help indices 2021-05-18T14:17:19.4028112Z *** copying figures 2021-05-18T14:17:19.4033037Z ** building package indices 2021-05-18T14:17:19.8860831Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:17:20.0925201Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:17:20.2278930Z ** testing if installed package can be loaded from final location 2021-05-18T14:17:20.4967787Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:17:20.5002953Z * DONE (rlang) 2021-05-18T14:17:20.7644015Z * installing *source* package ‘magrittr’ ... 2021-05-18T14:17:20.7670000Z ** package ‘magrittr’ successfully unpacked and MD5 sums checked 2021-05-18T14:17:20.7671263Z ** using staged installation 2021-05-18T14:17:20.7799603Z ** libs 2021-05-18T14:17:20.7847958Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pipe.c -o pipe.o 2021-05-18T14:17:20.9065269Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-18T14:17:20.9605020Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o magrittr.so pipe.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:17:20.9841730Z installing to /home/runner/work/_temp/Library/00LOCK-magrittr/00new/magrittr/libs 2021-05-18T14:17:20.9853154Z ** R 2021-05-18T14:17:20.9892098Z ** inst 2021-05-18T14:17:20.9906037Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:17:21.2848210Z ** help 2021-05-18T14:17:21.3254838Z *** installing help indices 2021-05-18T14:17:21.3556904Z *** copying figures 2021-05-18T14:17:21.3559899Z ** building package indices 2021-05-18T14:17:21.5623466Z ** installing vignettes 2021-05-18T14:17:21.5681701Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:17:21.7441485Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:17:21.7615934Z ** testing if installed package can be loaded from final location 2021-05-18T14:17:21.9372877Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:17:21.9379870Z * DONE (magrittr) 2021-05-18T14:17:22.1833720Z * installing *source* package ‘glue’ ... 2021-05-18T14:17:22.1853617Z ** package ‘glue’ successfully unpacked and MD5 sums checked 2021-05-18T14:17:22.1854800Z ** using staged installation 2021-05-18T14:17:22.2008349Z ** libs 2021-05-18T14:17:22.2057878Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c glue.c -o glue.o 2021-05-18T14:17:22.3215001Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:17:22.3655767Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c trim.c -o trim.o 2021-05-18T14:17:22.4487136Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o glue.so glue.o init.o trim.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:17:22.4721576Z installing to /home/runner/work/_temp/Library/00LOCK-glue/00new/glue/libs 2021-05-18T14:17:22.4724751Z ** R 2021-05-18T14:17:22.4775761Z ** inst 2021-05-18T14:17:22.4786729Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:17:22.9554362Z ** help 2021-05-18T14:17:22.9841495Z *** installing help indices 2021-05-18T14:17:23.0147374Z *** copying figures 2021-05-18T14:17:23.0149274Z ** building package indices 2021-05-18T14:17:23.2161086Z ** installing vignettes 2021-05-18T14:17:23.2221390Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:17:23.4473940Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:17:23.4652598Z ** testing if installed package can be loaded from final location 2021-05-18T14:17:23.6883148Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:17:23.6890836Z * DONE (glue) 2021-05-18T14:17:23.9091440Z * installing *source* package ‘sys’ ... 2021-05-18T14:17:23.9103846Z ** package ‘sys’ successfully unpacked and MD5 sums checked 2021-05-18T14:17:23.9105081Z ** using staged installation 2021-05-18T14:17:23.9308045Z ** libs 2021-05-18T14:17:23.9355298Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c exec.c -o exec.o 2021-05-18T14:17:24.1245725Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:17:24.1710254Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o sys.so exec.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:17:24.1961851Z installing to /home/runner/work/_temp/Library/00LOCK-sys/00new/sys/libs 2021-05-18T14:17:24.1962877Z ** R 2021-05-18T14:17:24.1987291Z ** inst 2021-05-18T14:17:24.1995320Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:17:24.4821222Z ** help 2021-05-18T14:17:24.5016852Z *** installing help indices 2021-05-18T14:17:24.5210678Z ** building package indices 2021-05-18T14:17:24.7161429Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:17:24.8961862Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:17:24.9139786Z ** testing if installed package can be loaded from final location 2021-05-18T14:17:25.0907649Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:17:25.0913577Z * DONE (sys) 2021-05-18T14:17:25.2990748Z * installing *source* package ‘mime’ ... 2021-05-18T14:17:25.2998678Z ** package ‘mime’ successfully unpacked and MD5 sums checked 2021-05-18T14:17:25.2999865Z ** using staged installation 2021-05-18T14:17:25.3131259Z ** libs 2021-05-18T14:17:25.3179214Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:17:25.3633444Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rawmatch.c -o rawmatch.o 2021-05-18T14:17:25.4192476Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o mime.so init.o rawmatch.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:17:25.4344586Z installing to /home/runner/work/_temp/Library/00LOCK-mime/00new/mime/libs 2021-05-18T14:17:25.4360548Z ** R 2021-05-18T14:17:25.4416516Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:17:25.7720467Z ** help 2021-05-18T14:17:25.7943350Z *** installing help indices 2021-05-18T14:17:25.8103350Z ** building package indices 2021-05-18T14:17:26.0040716Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:17:26.1874523Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:17:26.2056619Z ** testing if installed package can be loaded from final location 2021-05-18T14:17:26.3873207Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:17:26.3878962Z * DONE (mime) 2021-05-18T14:17:26.7400214Z * installing *source* package ‘curl’ ... 2021-05-18T14:17:26.7477981Z ** package ‘curl’ successfully unpacked and MD5 sums checked 2021-05-18T14:17:26.7479809Z ** using staged installation 2021-05-18T14:17:26.7566908Z Found pkg-config cflags and libs! 2021-05-18T14:17:26.8406696Z Using PKG_CFLAGS=-I/usr/include/x86_64-linux-gnu 2021-05-18T14:17:26.8407867Z Using PKG_LIBS=-lcurl 2021-05-18T14:17:26.8931052Z ** libs 2021-05-18T14:17:26.8985449Z rm -f curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o 2021-05-18T14:17:26.9018039Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c callbacks.c -o callbacks.o 2021-05-18T14:17:26.9762198Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c curl.c -o curl.o 2021-05-18T14:17:27.1004272Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c download.c -o download.o 2021-05-18T14:17:27.1856300Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c escape.c -o escape.o 2021-05-18T14:17:27.2426537Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fetch.c -o fetch.o 2021-05-18T14:17:27.3445089Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c form.c -o form.o 2021-05-18T14:17:27.4151811Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c getdate.c -o getdate.o 2021-05-18T14:17:27.4709634Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c handle.c -o handle.o 2021-05-18T14:17:27.7987590Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ieproxy.c -o ieproxy.o 2021-05-18T14:17:27.8383529Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:17:27.8962523Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c interrupt.c -o interrupt.o 2021-05-18T14:17:27.9635546Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c multi.c -o multi.o 2021-05-18T14:17:28.1369376Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c nslookup.c -o nslookup.o 2021-05-18T14:17:28.1929161Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c reflist.c -o reflist.o 2021-05-18T14:17:28.2481475Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c split.c -o split.o 2021-05-18T14:17:28.2925852Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ssl.c -o ssl.o 2021-05-18T14:17:28.3400628Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typechecking.c -o typechecking.o 2021-05-18T14:17:28.3961933Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-18T14:17:28.5169260Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-18T14:17:28.5843077Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c winidn.c -o winidn.o 2021-05-18T14:17:28.6045926Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c writer.c -o writer.o 2021-05-18T14:17:28.6569902Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o -lcurl -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:17:28.6884082Z installing to /home/runner/work/_temp/Library/00LOCK-curl/00new/curl/libs 2021-05-18T14:17:28.6900077Z ** R 2021-05-18T14:17:28.7016843Z ** inst 2021-05-18T14:17:28.7052881Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:17:29.2264290Z ** help 2021-05-18T14:17:29.2738220Z *** installing help indices 2021-05-18T14:17:29.3077530Z ** building package indices 2021-05-18T14:17:29.5216770Z ** installing vignettes 2021-05-18T14:17:29.5294647Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:17:29.7225994Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:17:29.7404846Z ** testing if installed package can be loaded from final location 2021-05-18T14:17:29.9386396Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:17:29.9389165Z * DONE (curl) 2021-05-18T14:17:30.2658053Z * installing *source* package ‘jsonlite’ ... 2021-05-18T14:17:30.2713296Z ** package ‘jsonlite’ successfully unpacked and MD5 sums checked 2021-05-18T14:17:30.2714731Z ** using staged installation 2021-05-18T14:17:30.2854676Z ** libs 2021-05-18T14:17:30.2911160Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c base64.c -o base64.o 2021-05-18T14:17:30.3574556Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_array.c -o collapse_array.o 2021-05-18T14:17:30.4150071Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_object.c -o collapse_object.o 2021-05-18T14:17:30.4788643Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_pretty.c -o collapse_pretty.o 2021-05-18T14:17:30.5882148Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c escape_chars.c -o escape_chars.o 2021-05-18T14:17:30.6580040Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c integer64_to_na.c -o integer64_to_na.o 2021-05-18T14:17:30.7069998Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_datelist.c -o is_datelist.o 2021-05-18T14:17:30.7550761Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_recordlist.c -o is_recordlist.o 2021-05-18T14:17:30.8109098Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_scalarlist.c -o is_scalarlist.o 2021-05-18T14:17:30.8612483Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c modp_numtoa.c -o modp_numtoa.o 2021-05-18T14:17:30.9881369Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c null_to_na.c -o null_to_na.o 2021-05-18T14:17:31.0560430Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c num_to_char.c -o num_to_char.o 2021-05-18T14:17:31.1381077Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c parse.c -o parse.o 2021-05-18T14:17:31.2095263Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c prettify.c -o prettify.o 2021-05-18T14:17:31.2769862Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c push_parser.c -o push_parser.o 2021-05-18T14:17:31.3343137Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c r-base64.c -o r-base64.o 2021-05-18T14:17:31.3891545Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c register.c -o register.o 2021-05-18T14:17:31.4348275Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c row_collapse.c -o row_collapse.o 2021-05-18T14:17:31.5028557Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c transpose_list.c -o transpose_list.o 2021-05-18T14:17:31.5553382Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c validate.c -o validate.o 2021-05-18T14:17:31.6055248Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl.c -o yajl/yajl.o 2021-05-18T14:17:31.6680608Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o 2021-05-18T14:17:31.6999835Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_buf.c -o yajl/yajl_buf.o 2021-05-18T14:17:31.7482999Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_encode.c -o yajl/yajl_encode.o 2021-05-18T14:17:31.8498079Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_gen.c -o yajl/yajl_gen.o 2021-05-18T14:17:32.0844936Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_lex.c -o yajl/yajl_lex.o 2021-05-18T14:17:32.3398356Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_parser.c -o yajl/yajl_parser.o 2021-05-18T14:17:32.5069380Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_tree.c -o yajl/yajl_tree.o 2021-05-18T14:17:32.6437624Z ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o 2021-05-18T14:17:32.6517763Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:17:32.6841686Z installing to /home/runner/work/_temp/Library/00LOCK-jsonlite/00new/jsonlite/libs 2021-05-18T14:17:32.6854923Z ** R 2021-05-18T14:17:32.7020005Z ** inst 2021-05-18T14:17:32.7036871Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:17:33.7536727Z in method for ‘asJSON’ with signature ‘"blob"’: no definition for class “blob” 2021-05-18T14:17:33.7538580Z ** help 2021-05-18T14:17:33.7843748Z *** installing help indices 2021-05-18T14:17:33.8100783Z ** building package indices 2021-05-18T14:17:34.0121973Z ** installing vignettes 2021-05-18T14:17:34.0191645Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:17:34.2184472Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:17:34.2409927Z ** testing if installed package can be loaded from final location 2021-05-18T14:17:34.4511368Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:17:34.4527796Z * DONE (jsonlite) 2021-05-18T14:17:34.6604059Z * installing *source* package ‘ini’ ... 2021-05-18T14:17:34.6611371Z ** package ‘ini’ successfully unpacked and MD5 sums checked 2021-05-18T14:17:34.6612497Z ** using staged installation 2021-05-18T14:17:34.6720475Z ** R 2021-05-18T14:17:34.6746086Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:17:34.9164784Z ** help 2021-05-18T14:17:34.9290244Z *** installing help indices 2021-05-18T14:17:34.9522448Z ** building package indices 2021-05-18T14:17:35.1433954Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:17:35.3221786Z ** testing if installed package can be loaded from final location 2021-05-18T14:17:35.4980568Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:17:35.4986056Z * DONE (ini) 2021-05-18T14:17:35.7343160Z * installing *source* package ‘gitcreds’ ... 2021-05-18T14:17:35.7361171Z ** package ‘gitcreds’ successfully unpacked and MD5 sums checked 2021-05-18T14:17:35.7362266Z ** using staged installation 2021-05-18T14:17:35.7469840Z ** R 2021-05-18T14:17:35.7527565Z ** inst 2021-05-18T14:17:35.7538912Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:17:36.2425707Z ** help 2021-05-18T14:17:36.2678587Z *** installing help indices 2021-05-18T14:17:36.2906657Z ** building package indices 2021-05-18T14:17:36.4868207Z ** installing vignettes 2021-05-18T14:17:36.4922091Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:17:36.6708472Z ** testing if installed package can be loaded from final location 2021-05-18T14:17:36.8538011Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:17:36.8546038Z * DONE (gitcreds) 2021-05-18T14:17:37.1045449Z * installing *source* package ‘zip’ ... 2021-05-18T14:17:37.1070794Z ** package ‘zip’ successfully unpacked and MD5 sums checked 2021-05-18T14:17:37.1072050Z ** using staged installation 2021-05-18T14:17:37.1174762Z ** libs 2021-05-18T14:17:37.1224680Z gcc -g -O2 miniz.c zip.c unixutils.c tools/cmdzip.c -o tools/cmdzip 2021-05-18T14:17:39.8343416Z gcc -g -O2 miniz.c zip.c unixutils.c tools/cmdunzip.c -o tools/cmdunzip 2021-05-18T14:17:42.5080226Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:17:42.5536959Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c miniz.c -o miniz.o 2021-05-18T14:17:44.9868483Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rzip.c -o rzip.o 2021-05-18T14:17:45.0802392Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c zip.c -o zip.o 2021-05-18T14:17:45.2100554Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unixutils.c -o unixutils.o 2021-05-18T14:17:45.2733533Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o zip.so init.o miniz.o rzip.o zip.o unixutils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:17:45.3005459Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-zip/00new/zip 2021-05-18T14:17:45.3063510Z ** R 2021-05-18T14:17:45.3104584Z ** inst 2021-05-18T14:17:45.3115305Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:17:45.6446947Z ** help 2021-05-18T14:17:45.6655055Z *** installing help indices 2021-05-18T14:17:45.6896770Z ** building package indices 2021-05-18T14:17:45.8893542Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:17:46.0767517Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:17:46.0949463Z ** testing if installed package can be loaded from final location 2021-05-18T14:17:46.2785687Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:17:46.2793276Z * DONE (zip) 2021-05-18T14:17:46.5759278Z * installing *source* package ‘rstudioapi’ ... 2021-05-18T14:17:46.5801197Z ** package ‘rstudioapi’ successfully unpacked and MD5 sums checked 2021-05-18T14:17:46.5802493Z ** using staged installation 2021-05-18T14:17:46.5932694Z ** R 2021-05-18T14:17:46.6036148Z ** inst 2021-05-18T14:17:46.6055431Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:17:47.1360398Z ** help 2021-05-18T14:17:47.2986057Z *** installing help indices 2021-05-18T14:17:47.4157491Z *** copying figures 2021-05-18T14:17:47.4161510Z ** building package indices 2021-05-18T14:17:47.7103110Z ** installing vignettes 2021-05-18T14:17:47.7178944Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:17:47.8996731Z ** testing if installed package can be loaded from final location 2021-05-18T14:17:48.0842866Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:17:48.0853231Z * DONE (rstudioapi) 2021-05-18T14:17:48.3132454Z * installing *source* package ‘fastmap’ ... 2021-05-18T14:17:48.3148231Z ** package ‘fastmap’ successfully unpacked and MD5 sums checked 2021-05-18T14:17:48.3149455Z ** using staged installation 2021-05-18T14:17:48.3327662Z ** libs 2021-05-18T14:17:48.3382782Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilib/ -I/usr/local/include -DR_NO_REMAP -fpic -g -O2 -c fastmap.cpp -o fastmap.o 2021-05-18T14:17:50.2979528Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilib/ -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:17:50.3449710Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fastmap.so fastmap.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:17:50.4129406Z installing to /home/runner/work/_temp/Library/00LOCK-fastmap/00new/fastmap/libs 2021-05-18T14:17:50.4151641Z ** R 2021-05-18T14:17:50.4200130Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:17:50.8494565Z ** help 2021-05-18T14:17:50.8672138Z *** installing help indices 2021-05-18T14:17:50.8855818Z ** building package indices 2021-05-18T14:17:51.0812257Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:17:51.2664226Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:17:51.2853909Z ** testing if installed package can be loaded from final location 2021-05-18T14:17:51.4687835Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:17:51.4696203Z * DONE (fastmap) 2021-05-18T14:17:51.7181488Z * installing *source* package ‘yaml’ ... 2021-05-18T14:17:51.7206815Z ** package ‘yaml’ successfully unpacked and MD5 sums checked 2021-05-18T14:17:51.7208006Z ** using staged installation 2021-05-18T14:17:51.7301918Z ** libs 2021-05-18T14:17:51.7355656Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api.c -o api.o 2021-05-18T14:17:52.0630662Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dumper.c -o dumper.o 2021-05-18T14:17:52.1745354Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c emitter.c -o emitter.o 2021-05-18T14:17:53.0841385Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c implicit.c -o implicit.o 2021-05-18T14:17:53.2424346Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c loader.c -o loader.o 2021-05-18T14:17:53.3686169Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c parser.c -o parser.o 2021-05-18T14:17:53.7140945Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_emit.c -o r_emit.o 2021-05-18T14:17:53.9928865Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_ext.c -o r_ext.o 2021-05-18T14:17:54.0949279Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_parse.c -o r_parse.o 2021-05-18T14:17:54.4973226Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reader.c -o reader.o 2021-05-18T14:17:54.6030225Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c scanner.c -o scanner.o 2021-05-18T14:17:55.8811686Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c writer.c -o writer.o 2021-05-18T14:17:55.9404193Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o yaml.so api.o dumper.o emitter.o implicit.o loader.o parser.o r_emit.o r_ext.o r_parse.o reader.o scanner.o writer.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:17:55.9710816Z installing to /home/runner/work/_temp/Library/00LOCK-yaml/00new/yaml/libs 2021-05-18T14:17:55.9730555Z ** R 2021-05-18T14:17:55.9758648Z ** inst 2021-05-18T14:17:55.9772210Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:17:56.2280399Z ** help 2021-05-18T14:17:56.2446262Z *** installing help indices 2021-05-18T14:17:56.2693141Z ** building package indices 2021-05-18T14:17:56.4656277Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:17:56.6471467Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:17:56.6659205Z ** testing if installed package can be loaded from final location 2021-05-18T14:17:56.8430834Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:17:56.8436661Z * DONE (yaml) 2021-05-18T14:17:57.1021809Z * installing *source* package ‘withr’ ... 2021-05-18T14:17:57.1047081Z ** package ‘withr’ successfully unpacked and MD5 sums checked 2021-05-18T14:17:57.1048185Z ** using staged installation 2021-05-18T14:17:57.1202583Z ** R 2021-05-18T14:17:57.1286126Z ** inst 2021-05-18T14:17:57.1295939Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:17:57.7680418Z ** help 2021-05-18T14:17:57.8433701Z *** installing help indices 2021-05-18T14:17:57.9001866Z *** copying figures 2021-05-18T14:17:57.9004403Z ** building package indices 2021-05-18T14:17:58.1320486Z ** installing vignettes 2021-05-18T14:17:58.1367077Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:17:58.3168012Z ** testing if installed package can be loaded from final location 2021-05-18T14:17:58.5006559Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:17:58.5015155Z * DONE (withr) 2021-05-18T14:17:58.7312504Z * installing *source* package ‘whisker’ ... 2021-05-18T14:17:58.7328381Z ** package ‘whisker’ successfully unpacked and MD5 sums checked 2021-05-18T14:17:58.7329529Z ** using staged installation 2021-05-18T14:17:58.7422627Z ** R 2021-05-18T14:17:58.7462468Z ** inst 2021-05-18T14:17:58.7480842Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:17:59.1480480Z ** help 2021-05-18T14:17:59.1676235Z *** installing help indices 2021-05-18T14:17:59.1902322Z ** building package indices 2021-05-18T14:17:59.3867412Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:17:59.5634050Z ** testing if installed package can be loaded from final location 2021-05-18T14:17:59.7441331Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:17:59.7442661Z * DONE (whisker) 2021-05-18T14:17:59.9585222Z * installing *source* package ‘rappdirs’ ... 2021-05-18T14:17:59.9596059Z ** package ‘rappdirs’ successfully unpacked and MD5 sums checked 2021-05-18T14:17:59.9597117Z ** using staged installation 2021-05-18T14:17:59.9822149Z ** libs 2021-05-18T14:17:59.9869853Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:18:00.0323825Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c win-path.c -o win-path.o 2021-05-18T14:18:00.0784970Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rappdirs.so init.o win-path.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:18:00.0934784Z installing to /home/runner/work/_temp/Library/00LOCK-rappdirs/00new/rappdirs/libs 2021-05-18T14:18:00.0947015Z ** R 2021-05-18T14:18:00.0988283Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:18:00.3958699Z ** help 2021-05-18T14:18:00.4192795Z *** installing help indices 2021-05-18T14:18:00.4403536Z ** building package indices 2021-05-18T14:18:00.6382167Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:18:00.8163679Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:18:00.8340002Z ** testing if installed package can be loaded from final location 2021-05-18T14:18:01.0096227Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:18:01.0101993Z * DONE (rappdirs) 2021-05-18T14:18:01.4775546Z * installing *source* package ‘fs’ ... 2021-05-18T14:18:01.4907169Z ** package ‘fs’ successfully unpacked and MD5 sums checked 2021-05-18T14:18:01.4909855Z ** using staged installation 2021-05-18T14:18:01.5069541Z ** libs 2021-05-18T14:18:01.5131442Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c id.cc -o id.o 2021-05-18T14:18:02.0396990Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c file.cc -o file.o 2021-05-18T14:18:02.4506530Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c path.cc -o path.o 2021-05-18T14:18:02.8347086Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c fs.cc -o fs.o 2021-05-18T14:18:02.9146400Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c link.cc -o link.o 2021-05-18T14:18:03.2161134Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c utils.cc -o utils.o 2021-05-18T14:18:03.5139953Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c init.cc -o init.o 2021-05-18T14:18:03.6006477Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c dir.cc -o dir.o 2021-05-18T14:18:04.0186785Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c getmode.cc -o getmode.o 2021-05-18T14:18:04.2975608Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c error.cc -o error.o 2021-05-18T14:18:04.3951705Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c unix/getmode.cc -o unix/getmode.o 2021-05-18T14:18:04.6965737Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/setmode.c -o bsd/setmode.o 2021-05-18T14:18:04.8196741Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/strmode.c -o bsd/strmode.o 2021-05-18T14:18:04.8616800Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/reallocarray.c -o bsd/reallocarray.o 2021-05-18T14:18:04.8929644Z (cd libuv-1.38.1 \ 2021-05-18T14:18:04.8931928Z && CC="gcc" CFLAGS="-g -O2 -I/usr/local/include -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" LDFLAGS="-L/usr/local/lib" ./configure --quiet) 2021-05-18T14:18:09.1268513Z make --directory=libuv-1.38.1 \ 2021-05-18T14:18:09.1269441Z HAVE_DTRACE=0 2021-05-18T14:18:09.1369888Z make[1]: Entering directory '/tmp/Rtmpw1zACy/R.INSTALL7a174dad8ffb/fs/src/libuv-1.38.1' 2021-05-18T14:18:09.1464485Z CC src/libuv_la-fs-poll.lo 2021-05-18T14:18:09.7477893Z CC src/libuv_la-idna.lo 2021-05-18T14:18:10.3581169Z CC src/libuv_la-inet.lo 2021-05-18T14:18:10.9921003Z CC src/libuv_la-random.lo 2021-05-18T14:18:11.5089975Z CC src/libuv_la-strscpy.lo 2021-05-18T14:18:11.9819372Z CC src/libuv_la-threadpool.lo 2021-05-18T14:18:12.6209722Z CC src/libuv_la-timer.lo 2021-05-18T14:18:13.2281421Z CC src/libuv_la-uv-data-getter-setters.lo 2021-05-18T14:18:13.7496791Z CC src/libuv_la-uv-common.lo 2021-05-18T14:18:14.8221588Z CC src/libuv_la-version.lo 2021-05-18T14:18:15.3033472Z CC src/unix/libuv_la-async.lo 2021-05-18T14:18:15.9215757Z CC src/unix/libuv_la-core.lo 2021-05-18T14:18:17.0491155Z CC src/unix/libuv_la-dl.lo 2021-05-18T14:18:17.5732339Z CC src/unix/libuv_la-fs.lo 2021-05-18T14:18:19.0436123Z CC src/unix/libuv_la-getaddrinfo.lo 2021-05-18T14:18:19.6371405Z CC src/unix/libuv_la-getnameinfo.lo 2021-05-18T14:18:20.1648979Z CC src/unix/libuv_la-loop-watcher.lo 2021-05-18T14:18:20.7576590Z CC src/unix/libuv_la-loop.lo 2021-05-18T14:18:21.3343881Z CC src/unix/libuv_la-pipe.lo 2021-05-18T14:18:21.9664276Z CC src/unix/libuv_la-poll.lo 2021-05-18T14:18:22.5268740Z CC src/unix/libuv_la-process.lo 2021-05-18T14:18:23.2740247Z CC src/unix/libuv_la-random-devurandom.lo 2021-05-18T14:18:23.8015124Z CC src/unix/libuv_la-signal.lo 2021-05-18T14:18:24.6909929Z CC src/unix/libuv_la-stream.lo 2021-05-18T14:18:25.7291787Z CC src/unix/libuv_la-tcp.lo 2021-05-18T14:18:26.3847476Z CC src/unix/libuv_la-thread.lo 2021-05-18T14:18:27.0969207Z CC src/unix/libuv_la-tty.lo 2021-05-18T14:18:27.6995603Z CC src/unix/libuv_la-udp.lo 2021-05-18T14:18:28.7173347Z CC src/unix/libuv_la-linux-core.lo 2021-05-18T14:18:29.7267099Z CC src/unix/libuv_la-linux-inotify.lo 2021-05-18T14:18:30.5397473Z CC src/unix/libuv_la-linux-syscalls.lo 2021-05-18T14:18:30.9953337Z CC src/unix/libuv_la-procfs-exepath.lo 2021-05-18T14:18:31.5053116Z CC src/unix/libuv_la-proctitle.lo 2021-05-18T14:18:32.0460159Z CC src/unix/libuv_la-random-getrandom.lo 2021-05-18T14:18:32.5572302Z CC src/unix/libuv_la-random-sysctl-linux.lo 2021-05-18T14:18:33.0808391Z CCLD libuv.la 2021-05-18T14:18:33.2790733Z ar: `u' modifier ignored since `D' is the default (see `U') 2021-05-18T14:18:33.3104006Z make[1]: Leaving directory '/tmp/Rtmpw1zACy/R.INSTALL7a174dad8ffb/fs/src/libuv-1.38.1' 2021-05-18T14:18:33.3122860Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fs.so id.o file.o path.o fs.o link.o utils.o init.o dir.o getmode.o error.o unix/getmode.o bsd/setmode.o bsd/strmode.o bsd/reallocarray.o ./libuv-1.38.1/.libs/libuv.a -pthread -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:18:33.4000413Z installing to /home/runner/work/_temp/Library/00LOCK-fs/00new/fs/libs 2021-05-18T14:18:33.4030176Z ** R 2021-05-18T14:18:33.4127614Z ** inst 2021-05-18T14:18:33.4138641Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:18:34.4214599Z ** help 2021-05-18T14:18:34.4893025Z *** installing help indices 2021-05-18T14:18:34.5395184Z ** building package indices 2021-05-18T14:18:34.7680552Z ** installing vignettes 2021-05-18T14:18:34.7782895Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:18:35.0049114Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:18:35.0240615Z ** testing if installed package can be loaded from final location 2021-05-18T14:18:35.2583471Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:18:35.2594351Z * DONE (fs) 2021-05-18T14:18:35.4907725Z * installing *source* package ‘clipr’ ... 2021-05-18T14:18:35.4920358Z ** package ‘clipr’ successfully unpacked and MD5 sums checked 2021-05-18T14:18:35.4921244Z ** using staged installation 2021-05-18T14:18:35.5134225Z ** R 2021-05-18T14:18:35.5174265Z ** inst 2021-05-18T14:18:35.5183846Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:18:35.8370913Z ** help 2021-05-18T14:18:35.8575169Z *** installing help indices 2021-05-18T14:18:35.8782000Z ** building package indices 2021-05-18T14:18:36.0697110Z ** installing vignettes 2021-05-18T14:18:36.0747945Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:18:36.2498270Z ** testing if installed package can be loaded from final location 2021-05-18T14:18:36.4275714Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:18:36.4281990Z * DONE (clipr) 2021-05-18T14:18:37.1597834Z * installing *source* package ‘git2r’ ... 2021-05-18T14:18:37.1835602Z ** package ‘git2r’ successfully unpacked and MD5 sums checked 2021-05-18T14:18:37.1836422Z ** using staged installation 2021-05-18T14:18:37.3586301Z checking build system type... x86_64-unknown-linux-gnu 2021-05-18T14:18:37.3587909Z checking host system type... x86_64-unknown-linux-gnu 2021-05-18T14:18:37.3593975Z checking for gcc... gcc 2021-05-18T14:18:37.4179610Z checking whether the C compiler works... yes 2021-05-18T14:18:37.4181084Z checking for C compiler default output file name... a.out 2021-05-18T14:18:37.4550369Z checking for suffix of executables... 2021-05-18T14:18:37.4956963Z checking whether we are cross compiling... no 2021-05-18T14:18:37.5188434Z checking for suffix of object files... o 2021-05-18T14:18:37.5402592Z checking whether we are using the GNU C compiler... yes 2021-05-18T14:18:37.5619255Z checking whether gcc accepts -g... yes 2021-05-18T14:18:37.5977880Z checking for gcc option to accept ISO C89... none needed 2021-05-18T14:18:37.5984732Z checking for pkg-config... /usr/bin/pkg-config 2021-05-18T14:18:37.5998908Z checking pkg-config is at least version 0.9.0... yes 2021-05-18T14:18:37.6067136Z Found pkg-config cflags and libs! 2021-05-18T14:18:37.6988191Z checking whether the libgit2 version will work in git2r... yes 2021-05-18T14:18:37.8186033Z checking whether the libgit2 function git_buf_dispose is available... yes 2021-05-18T14:18:37.9386899Z checking whether the libgit2 constant GIT_OBJECT_ANY is available... yes 2021-05-18T14:18:38.0594949Z checking whether the libgit2 function git_error_last is available... yes 2021-05-18T14:18:38.1608221Z checking whether the libgit2 function git_oid_is_zero is available... no 2021-05-18T14:18:38.1609777Z ----- Results of the git2r package configure ----- 2021-05-18T14:18:38.1610265Z 2021-05-18T14:18:38.1611231Z PKG_CFLAGS: -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR 2021-05-18T14:18:38.1612080Z PKG_LIBS: -lgit2 2021-05-18T14:18:38.1612456Z 2021-05-18T14:18:38.1613168Z -------------------------------------------------- 2021-05-18T14:18:38.1800350Z configure: creating ./config.status 2021-05-18T14:18:38.2535980Z config.status: creating src/Makevars 2021-05-18T14:18:38.3078899Z ** libs 2021-05-18T14:18:38.3141759Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r.c -o git2r.o 2021-05-18T14:18:38.3790926Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_S3.c -o git2r_S3.o 2021-05-18T14:18:38.4286825Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_arg.c -o git2r_arg.o 2021-05-18T14:18:38.5782232Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_blame.c -o git2r_blame.o 2021-05-18T14:18:38.6656846Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_blob.c -o git2r_blob.o 2021-05-18T14:18:38.7834727Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_branch.c -o git2r_branch.o 2021-05-18T14:18:39.0019408Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_checkout.c -o git2r_checkout.o 2021-05-18T14:18:39.0898258Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_clone.c -o git2r_clone.o 2021-05-18T14:18:39.1751960Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_commit.c -o git2r_commit.o 2021-05-18T14:18:39.3207100Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_config.c -o git2r_config.o 2021-05-18T14:18:39.4714660Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_cred.c -o git2r_cred.o 2021-05-18T14:18:39.5593553Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_diff.c -o git2r_diff.o 2021-05-18T14:18:39.7987710Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_error.c -o git2r_error.o 2021-05-18T14:18:39.8622460Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_graph.c -o git2r_graph.o 2021-05-18T14:18:39.9440614Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_index.c -o git2r_index.o 2021-05-18T14:18:40.0267415Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_libgit2.c -o git2r_libgit2.o 2021-05-18T14:18:40.1038288Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_merge.c -o git2r_merge.o 2021-05-18T14:18:40.2722704Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_note.c -o git2r_note.o 2021-05-18T14:18:40.3966166Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_object.c -o git2r_object.o 2021-05-18T14:18:40.4759860Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_odb.c -o git2r_odb.o 2021-05-18T14:18:40.6309311Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_oid.c -o git2r_oid.o 2021-05-18T14:18:40.6937610Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_push.c -o git2r_push.o 2021-05-18T14:18:40.7739886Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reference.c -o git2r_reference.o 2021-05-18T14:18:40.8663085Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reflog.c -o git2r_reflog.o 2021-05-18T14:18:40.9485315Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_remote.c -o git2r_remote.o 2021-05-18T14:18:41.1167071Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_repository.c -o git2r_repository.o 2021-05-18T14:18:41.2653501Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reset.c -o git2r_reset.o 2021-05-18T14:18:41.3460442Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_revparse.c -o git2r_revparse.o 2021-05-18T14:18:41.4236824Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_revwalk.c -o git2r_revwalk.o 2021-05-18T14:18:41.5946570Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_signature.c -o git2r_signature.o 2021-05-18T14:18:41.6718875Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_stash.c -o git2r_stash.o 2021-05-18T14:18:41.7836822Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_status.c -o git2r_status.o 2021-05-18T14:18:41.9356408Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_tag.c -o git2r_tag.o 2021-05-18T14:18:42.0578912Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_transfer.c -o git2r_transfer.o 2021-05-18T14:18:42.1223547Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_tree.c -o git2r_tree.o 2021-05-18T14:18:42.2338310Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o git2r.so git2r.o git2r_S3.o git2r_arg.o git2r_blame.o git2r_blob.o git2r_branch.o git2r_checkout.o git2r_clone.o git2r_commit.o git2r_config.o git2r_cred.o git2r_diff.o git2r_error.o git2r_graph.o git2r_index.o git2r_libgit2.o git2r_merge.o git2r_note.o git2r_object.o git2r_odb.o git2r_oid.o git2r_push.o git2r_reference.o git2r_reflog.o git2r_remote.o git2r_repository.o git2r_reset.o git2r_revparse.o git2r_revwalk.o git2r_signature.o git2r_stash.o git2r_status.o git2r_tag.o git2r_transfer.o git2r_tree.o -lgit2 -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:18:42.2762288Z installing to /home/runner/work/_temp/Library/00LOCK-git2r/00new/git2r/libs 2021-05-18T14:18:42.2764171Z ** R 2021-05-18T14:18:42.2956308Z ** inst 2021-05-18T14:18:42.2966445Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:18:43.2530647Z ** help 2021-05-18T14:18:43.4889120Z *** installing help indices 2021-05-18T14:18:43.6854592Z ** building package indices 2021-05-18T14:18:44.0207514Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:18:44.2128526Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:18:44.2307236Z ** testing if installed package can be loaded from final location 2021-05-18T14:18:44.4317345Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:18:44.4328796Z * DONE (git2r) 2021-05-18T14:18:44.6519225Z * installing *source* package ‘askpass’ ... 2021-05-18T14:18:44.6528137Z ** package ‘askpass’ successfully unpacked and MD5 sums checked 2021-05-18T14:18:44.6529191Z ** using staged installation 2021-05-18T14:18:44.6664670Z ** libs 2021-05-18T14:18:44.6713779Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c askpass.c -o askpass.o 2021-05-18T14:18:44.7217979Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o askpass.so askpass.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:18:44.7431744Z installing to /home/runner/work/_temp/Library/00LOCK-askpass/00new/askpass/libs 2021-05-18T14:18:44.7446047Z ** R 2021-05-18T14:18:44.7475426Z ** inst 2021-05-18T14:18:44.7483736Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:18:44.9999012Z ** help 2021-05-18T14:18:45.0175032Z *** installing help indices 2021-05-18T14:18:45.0317583Z ** building package indices 2021-05-18T14:18:45.2173494Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:18:45.3948487Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:18:45.4127457Z ** testing if installed package can be loaded from final location 2021-05-18T14:18:45.5838984Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:18:45.5844411Z * DONE (askpass) 2021-05-18T14:18:45.9161399Z * installing *source* package ‘cli’ ... 2021-05-18T14:18:45.9223947Z ** package ‘cli’ successfully unpacked and MD5 sums checked 2021-05-18T14:18:45.9225001Z ** using staged installation 2021-05-18T14:18:45.9407548Z ** R 2021-05-18T14:18:45.9672355Z ** inst 2021-05-18T14:18:45.9685165Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:18:48.5600413Z ** help 2021-05-18T14:18:48.7459828Z *** installing help indices 2021-05-18T14:18:48.8786054Z *** copying figures 2021-05-18T14:18:48.8787823Z ** building package indices 2021-05-18T14:18:49.1807294Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:18:49.4040158Z ** testing if installed package can be loaded from final location 2021-05-18T14:18:49.6734412Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:18:49.6762903Z * DONE (cli) 2021-05-18T14:18:49.9952394Z * installing *source* package ‘purrr’ ... 2021-05-18T14:18:50.0003036Z ** package ‘purrr’ successfully unpacked and MD5 sums checked 2021-05-18T14:18:50.0005208Z ** using staged installation 2021-05-18T14:18:50.0156617Z ** libs 2021-05-18T14:18:50.0207575Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c backports.c -o backports.o 2021-05-18T14:18:50.0587572Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-05-18T14:18:50.1484819Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c conditions.c -o conditions.o 2021-05-18T14:18:50.2376450Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c flatten.c -o flatten.o 2021-05-18T14:18:50.3457500Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:18:50.3905989Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c map.c -o map.o 2021-05-18T14:18:50.5099960Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pluck.c -o pluck.o 2021-05-18T14:18:50.6426187Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c transpose.c -o transpose.o 2021-05-18T14:18:50.7282380Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-18T14:18:50.7820365Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o purrr.so backports.o coerce.o conditions.o flatten.o init.o map.o pluck.o transpose.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:18:50.8081729Z installing to /home/runner/work/_temp/Library/00LOCK-purrr/00new/purrr/libs 2021-05-18T14:18:50.8084395Z ** R 2021-05-18T14:18:50.8247805Z ** inst 2021-05-18T14:18:50.8258231Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:18:52.0437649Z ** help 2021-05-18T14:18:52.2130815Z *** installing help indices 2021-05-18T14:18:52.3160344Z *** copying figures 2021-05-18T14:18:52.3165243Z ** building package indices 2021-05-18T14:18:52.5960581Z ** installing vignettes 2021-05-18T14:18:52.6019804Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:18:52.8057598Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:18:52.8229968Z ** testing if installed package can be loaded from final location 2021-05-18T14:18:53.0424708Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:18:53.0440075Z * DONE (purrr) 2021-05-18T14:18:53.3038263Z * installing *source* package ‘lifecycle’ ... 2021-05-18T14:18:53.3068069Z ** package ‘lifecycle’ successfully unpacked and MD5 sums checked 2021-05-18T14:18:53.3071255Z ** using staged installation 2021-05-18T14:18:53.3218166Z ** R 2021-05-18T14:18:53.3267295Z ** inst 2021-05-18T14:18:53.3281368Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:18:53.7360406Z ** help 2021-05-18T14:18:53.7671476Z *** installing help indices 2021-05-18T14:18:53.7915651Z *** copying figures 2021-05-18T14:18:53.7920469Z ** building package indices 2021-05-18T14:18:53.9864957Z ** installing vignettes 2021-05-18T14:18:53.9918468Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:18:54.1878575Z ** testing if installed package can be loaded from final location 2021-05-18T14:18:54.3840173Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:18:54.3848920Z * DONE (lifecycle) 2021-05-18T14:18:54.5995561Z * installing *source* package ‘cachem’ ... 2021-05-18T14:18:54.6006572Z ** package ‘cachem’ successfully unpacked and MD5 sums checked 2021-05-18T14:18:54.6007798Z ** using staged installation 2021-05-18T14:18:54.6137896Z ** libs 2021-05-18T14:18:54.6184414Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cache.c -o cache.o 2021-05-18T14:18:54.6681899Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:18:54.7144552Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o cachem.so cache.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:18:54.7363568Z installing to /home/runner/work/_temp/Library/00LOCK-cachem/00new/cachem/libs 2021-05-18T14:18:54.7378326Z ** R 2021-05-18T14:18:54.7506136Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:18:55.2757699Z ** help 2021-05-18T14:18:55.2991006Z *** installing help indices 2021-05-18T14:18:55.3186031Z ** building package indices 2021-05-18T14:18:55.5120984Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:18:55.7097325Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:18:55.7273992Z ** testing if installed package can be loaded from final location 2021-05-18T14:18:55.9272459Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:18:55.9280750Z * DONE (cachem) 2021-05-18T14:18:56.3743705Z * installing *source* package ‘openssl’ ... 2021-05-18T14:18:56.3868316Z ** package ‘openssl’ successfully unpacked and MD5 sums checked 2021-05-18T14:18:56.3869176Z ** using staged installation 2021-05-18T14:18:56.3962440Z Found pkg-config cflags and libs! 2021-05-18T14:18:56.4786868Z Using PKG_CFLAGS= 2021-05-18T14:18:56.6308287Z Using PKG_LIBS=-l:libssl.so.1.1 -l:libcrypto.so.1.1 2021-05-18T14:18:56.6466449Z ** libs 2021-05-18T14:18:56.6525608Z rm -f aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o openssl.so bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o 2021-05-18T14:18:56.6555474Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o 2021-05-18T14:18:56.7382948Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-18T14:18:56.8164653Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bignum.c -o bignum.o 2021-05-18T14:18:56.9172063Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cert.c -o cert.o 2021-05-18T14:18:57.0685273Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c compatibility.c -o compatibility.o 2021-05-18T14:18:57.1337939Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffie.c -o diffie.o 2021-05-18T14:18:57.2296400Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c envelope.c -o envelope.o 2021-05-18T14:18:57.3470553Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error.c -o error.o 2021-05-18T14:18:57.4017875Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c hash.c -o hash.o 2021-05-18T14:18:57.4978886Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c info.c -o info.o 2021-05-18T14:18:57.5637374Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keygen.c -o keygen.o 2021-05-18T14:18:57.6656346Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keys.c -o keys.o 2021-05-18T14:18:57.7976096Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c onload.c -o onload.o 2021-05-18T14:18:57.8865898Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c openssh.c -o openssh.o 2021-05-18T14:18:58.0692204Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c password.c -o password.o 2021-05-18T14:18:58.1231112Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pbkdf.c -o pbkdf.o 2021-05-18T14:18:58.1666364Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pem.c -o pem.o 2021-05-18T14:18:58.2963912Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs12.c -o pkcs12.o 2021-05-18T14:18:58.4371615Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs7.c -o pkcs7.o 2021-05-18T14:18:58.5614359Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rand.c -o rand.o 2021-05-18T14:18:58.6081504Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rsa.c -o rsa.o 2021-05-18T14:18:58.7062490Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signing.c -o signing.o 2021-05-18T14:18:58.8249239Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c ssl.c -o ssl.o 2021-05-18T14:18:58.9673760Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stream.c -o stream.o 2021-05-18T14:18:59.0841547Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write.c -o write.o 2021-05-18T14:18:59.2110797Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c x25519.c -o x25519.o 2021-05-18T14:18:59.3347714Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bcrypt/bcrypt_pbkdf.c -o bcrypt/bcrypt_pbkdf.o 2021-05-18T14:18:59.4040146Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bcrypt/blowfish.c -o bcrypt/blowfish.o 2021-05-18T14:18:59.5794103Z ar rcs bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o 2021-05-18T14:18:59.5850098Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o openssl.so aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o -Lbcrypt -lstatbcrypt -l:libssl.so.1.1 -l:libcrypto.so.1.1 -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:18:59.6447322Z installing to /home/runner/work/_temp/Library/00LOCK-openssl/00new/openssl/libs 2021-05-18T14:18:59.6465290Z ** R 2021-05-18T14:18:59.6570314Z ** inst 2021-05-18T14:18:59.6621834Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:19:00.5989783Z ** help 2021-05-18T14:19:00.6512650Z *** installing help indices 2021-05-18T14:19:00.6887280Z ** building package indices 2021-05-18T14:19:00.9080537Z ** installing vignettes 2021-05-18T14:19:00.9189092Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:19:01.1041153Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:19:01.1220499Z ** testing if installed package can be loaded from final location 2021-05-18T14:19:01.3199337Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:19:01.3212251Z * DONE (openssl) 2021-05-18T14:19:01.5396064Z * installing *source* package ‘memoise’ ... 2021-05-18T14:19:01.5411159Z ** package ‘memoise’ successfully unpacked and MD5 sums checked 2021-05-18T14:19:01.5414960Z ** using staged installation 2021-05-18T14:19:01.5567234Z ** R 2021-05-18T14:19:01.5675738Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:19:01.9643641Z ** help 2021-05-18T14:19:01.9895719Z *** installing help indices 2021-05-18T14:19:02.0137112Z ** building package indices 2021-05-18T14:19:02.2133752Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:19:02.4111712Z ** testing if installed package can be loaded from final location 2021-05-18T14:19:02.6131661Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:19:02.6138301Z * DONE (memoise) 2021-05-18T14:19:02.9311214Z * installing *source* package ‘httr’ ... 2021-05-18T14:19:02.9359300Z ** package ‘httr’ successfully unpacked and MD5 sums checked 2021-05-18T14:19:02.9361381Z ** using staged installation 2021-05-18T14:19:02.9513236Z ** R 2021-05-18T14:19:02.9681985Z ** demo 2021-05-18T14:19:02.9692811Z ** inst 2021-05-18T14:19:02.9706369Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:19:05.5635722Z ** help 2021-05-18T14:19:05.7190897Z *** installing help indices 2021-05-18T14:19:05.8259686Z ** building package indices 2021-05-18T14:19:06.1120697Z ** installing vignettes 2021-05-18T14:19:06.1190966Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:19:06.3005499Z ** testing if installed package can be loaded from final location 2021-05-18T14:19:06.5296034Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:19:06.5326738Z * DONE (httr) 2021-05-18T14:19:06.7705210Z * installing *source* package ‘credentials’ ... 2021-05-18T14:19:06.7721524Z ** package ‘credentials’ successfully unpacked and MD5 sums checked 2021-05-18T14:19:06.7722642Z ** using staged installation 2021-05-18T14:19:06.7860774Z ** R 2021-05-18T14:19:06.7905423Z ** inst 2021-05-18T14:19:06.7916824Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:19:07.5700384Z ** help 2021-05-18T14:19:07.5701602Z *** installing help indices 2021-05-18T14:19:07.5702260Z ** building package indices 2021-05-18T14:19:07.5702893Z ** installing vignettes 2021-05-18T14:19:07.5703702Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:19:07.7347040Z ** testing if installed package can be loaded from final location 2021-05-18T14:19:07.9784884Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:19:07.9792302Z * DONE (credentials) 2021-05-18T14:19:08.2217202Z * installing *source* package ‘gh’ ... 2021-05-18T14:19:08.2235445Z ** package ‘gh’ successfully unpacked and MD5 sums checked 2021-05-18T14:19:08.2236607Z ** using staged installation 2021-05-18T14:19:08.2387916Z ** R 2021-05-18T14:19:08.2470162Z ** inst 2021-05-18T14:19:08.2480200Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:19:09.3001462Z ** help 2021-05-18T14:19:09.3287547Z *** installing help indices 2021-05-18T14:19:09.3585705Z ** building package indices 2021-05-18T14:19:09.5592593Z ** installing vignettes 2021-05-18T14:19:09.5647559Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:19:09.8134870Z ** testing if installed package can be loaded from final location 2021-05-18T14:19:10.0712401Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:19:10.0726773Z * DONE (gh) 2021-05-18T14:19:10.3327677Z * installing *source* package ‘gert’ ... 2021-05-18T14:19:10.3353393Z ** package ‘gert’ successfully unpacked and MD5 sums checked 2021-05-18T14:19:10.3354595Z ** using staged installation 2021-05-18T14:19:10.3445539Z Found pkg-config cflags and libs! 2021-05-18T14:19:10.4273020Z Using PKG_CFLAGS= 2021-05-18T14:19:10.4274760Z Using PKG_LIBS=-lgit2 2021-05-18T14:19:10.4646137Z Configuration OK! 2021-05-18T14:19:10.4808873Z ** libs 2021-05-18T14:19:10.4860049Z rm -f gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o 2021-05-18T14:19:10.4888158Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c branch.c -o branch.o 2021-05-18T14:19:10.6951498Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c clone.c -o clone.o 2021-05-18T14:19:10.9153253Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c commit.c -o commit.o 2021-05-18T14:19:11.1325815Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c config.c -o config.o 2021-05-18T14:19:11.2190368Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c conflicts.c -o conflicts.o 2021-05-18T14:19:11.2928387Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c files.c -o files.o 2021-05-18T14:19:11.4376898Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:19:11.5010706Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c merge.c -o merge.o 2021-05-18T14:19:11.6023605Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rebase.c -o rebase.o 2021-05-18T14:19:11.7119890Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c stash.c -o stash.o 2021-05-18T14:19:11.7951479Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c submodules.c -o submodules.o 2021-05-18T14:19:11.9057834Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c tag.c -o tag.o 2021-05-18T14:19:11.9872006Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-18T14:19:12.1069456Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-18T14:19:12.1809690Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o -lgit2 -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:19:12.2124694Z installing to /home/runner/work/_temp/Library/00LOCK-gert/00new/gert/libs 2021-05-18T14:19:12.2141287Z ** R 2021-05-18T14:19:12.2225270Z ** inst 2021-05-18T14:19:12.2234412Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:19:12.9573013Z ** help 2021-05-18T14:19:13.0165601Z *** installing help indices 2021-05-18T14:19:13.0604187Z ** building package indices 2021-05-18T14:19:13.2840507Z ** installing vignettes 2021-05-18T14:19:13.2914824Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:19:13.5152945Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:19:13.5335812Z ** testing if installed package can be loaded from final location 2021-05-18T14:19:13.7641240Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:19:13.7651872Z * DONE (gert) 2021-05-18T14:19:14.1617198Z * installing *source* package ‘usethis’ ... 2021-05-18T14:19:14.1695069Z ** package ‘usethis’ successfully unpacked and MD5 sums checked 2021-05-18T14:19:14.1696374Z ** using staged installation 2021-05-18T14:19:14.1938220Z ** R 2021-05-18T14:19:14.2275227Z ** inst 2021-05-18T14:19:14.2308564Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:19:17.1003036Z ** help 2021-05-18T14:19:17.2957096Z *** installing help indices 2021-05-18T14:19:17.4325800Z *** copying figures 2021-05-18T14:19:17.4332395Z ** building package indices 2021-05-18T14:19:17.7455411Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:19:18.0392955Z ** testing if installed package can be loaded from final location 2021-05-18T14:19:18.3809637Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:19:18.3840032Z * DONE (usethis) 2021-05-18T14:19:18.3951680Z 2021-05-18T14:19:18.3952677Z The downloaded source packages are in 2021-05-18T14:19:18.3953951Z ‘/tmp/RtmpjhTgLB/downloaded_packages’ 2021-05-18T14:19:18.3956484Z Running `R CMD build`... 2021-05-18T14:19:20.5663055Z * checking for file ‘/tmp/RtmpjhTgLB/remotes73e5422699b3/ropensci-tic-3b4dfb8/DESCRIPTION’ ... OK 2021-05-18T14:19:20.5664598Z * preparing ‘tic’: 2021-05-18T14:19:20.5665636Z * checking DESCRIPTION meta-information ... OK 2021-05-18T14:19:20.5666666Z * installing the package to process help pages 2021-05-18T14:19:20.5667917Z * checking for LF line-endings in source and make files and shell scripts 2021-05-18T14:19:20.5669022Z * checking for empty or unneeded directories 2021-05-18T14:19:20.5669895Z Removed empty directory ‘tic/.circleci’ 2021-05-18T14:19:20.5670762Z Removed empty directory ‘tic/pkgdown’ 2021-05-18T14:19:20.5671571Z * building ‘tic_0.10.0.tar.gz’ 2021-05-18T14:19:20.5673638Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:19:20.5674545Z (as ‘lib’ is unspecified) 2021-05-18T14:19:20.9067557Z * installing *source* package ‘tic’ ... 2021-05-18T14:19:20.9098684Z ** using staged installation 2021-05-18T14:19:20.9339602Z ** R 2021-05-18T14:19:20.9529867Z ** inst 2021-05-18T14:19:20.9565478Z ** preparing package for lazy loading 2021-05-18T14:19:21.3240590Z ** help 2021-05-18T14:19:21.4783030Z *** installing help indices 2021-05-18T14:19:21.5782606Z *** copying figures 2021-05-18T14:19:21.5788106Z ** building package indices 2021-05-18T14:19:21.8556960Z ** installing vignettes 2021-05-18T14:19:21.8603942Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:19:22.1266076Z ** testing if installed package can be loaded from final location 2021-05-18T14:19:22.4444586Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:19:22.4474850Z * DONE (tic) 2021-05-18T14:19:22.4609389Z Using github PAT from envvar GITHUB_PAT 2021-05-18T14:19:22.7466841Z Downloading GitHub repo muschellij2/ghtravis@HEAD 2021-05-18T14:19:23.5988840Z desc (1.3.0 -> 7be86f2f7...) [GitHub] 2021-05-18T14:19:23.5990476Z utf8 (NA -> 1.2.1 ) [CRAN] 2021-05-18T14:19:23.5993087Z Installing 37 packages: utf8, vctrs, pkgconfig, pillar, tibble, rematch2, fansi, diffobj, waldo, ps, processx, praise, pkgload, evaluate, ellipsis, digest, callr, brio, xml2, xfun, markdown, highr, stringr, stringi, Rcpp, knitr, commonmark, brew, xopen, sessioninfo, prettyunits, pkgbuild, testthat, rversions, roxygen2, rcmdcheck, devtools 2021-05-18T14:19:23.5995500Z vctrs (NA -> 0.3.8 ) [CRAN] 2021-05-18T14:19:23.5996471Z pkgconfig (NA -> 2.0.3 ) [CRAN] 2021-05-18T14:19:23.5997442Z pillar (NA -> 1.6.1 ) [CRAN] 2021-05-18T14:19:23.5998620Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:19:23.6002559Z tibble (NA -> 3.1.2 ) [CRAN] 2021-05-18T14:19:23.6003400Z (as ‘lib’ is unspecified) 2021-05-18T14:19:23.6004161Z rematch2 (NA -> 2.1.2 ) [CRAN] 2021-05-18T14:19:23.6004870Z fansi (NA -> 0.4.2 ) [CRAN] 2021-05-18T14:19:23.6005576Z diffobj (NA -> 0.3.4 ) [CRAN] 2021-05-18T14:19:23.6006265Z waldo (NA -> 0.2.5 ) [CRAN] 2021-05-18T14:19:23.6006951Z ps (NA -> 1.6.0 ) [CRAN] 2021-05-18T14:19:23.6007664Z processx (NA -> 3.5.2 ) [CRAN] 2021-05-18T14:19:23.6008372Z praise (NA -> 1.0.0 ) [CRAN] 2021-05-18T14:19:23.6009094Z pkgload (NA -> 1.2.1 ) [CRAN] 2021-05-18T14:19:23.6009822Z evaluate (NA -> 0.14 ) [CRAN] 2021-05-18T14:19:23.6010543Z ellipsis (NA -> 0.3.2 ) [CRAN] 2021-05-18T14:19:23.6011265Z digest (NA -> 0.6.27 ) [CRAN] 2021-05-18T14:19:23.6011946Z callr (NA -> 3.7.0 ) [CRAN] 2021-05-18T14:19:23.6012635Z brio (NA -> 1.1.2 ) [CRAN] 2021-05-18T14:19:23.6013340Z xml2 (NA -> 1.3.2 ) [CRAN] 2021-05-18T14:19:23.6014010Z xfun (NA -> 0.23 ) [CRAN] 2021-05-18T14:19:23.6014721Z markdown (NA -> 1.1 ) [CRAN] 2021-05-18T14:19:23.6015434Z highr (NA -> 0.9 ) [CRAN] 2021-05-18T14:19:23.6016125Z stringr (NA -> 1.4.0 ) [CRAN] 2021-05-18T14:19:23.6016839Z stringi (NA -> 1.6.2 ) [CRAN] 2021-05-18T14:19:23.6017526Z Rcpp (NA -> 1.0.6 ) [CRAN] 2021-05-18T14:19:23.6018220Z knitr (NA -> 1.33 ) [CRAN] 2021-05-18T14:19:23.6018938Z commonmark (NA -> 1.7 ) [CRAN] 2021-05-18T14:19:23.6019642Z brew (NA -> 1.0-6 ) [CRAN] 2021-05-18T14:19:23.6020337Z xopen (NA -> 1.0.0 ) [CRAN] 2021-05-18T14:19:23.6021067Z sessioninfo (NA -> 1.1.1 ) [CRAN] 2021-05-18T14:19:23.6021819Z prettyunits (NA -> 1.1.1 ) [CRAN] 2021-05-18T14:19:23.6022571Z pkgbuild (NA -> 1.2.0 ) [CRAN] 2021-05-18T14:19:23.6023606Z testthat (NA -> 3.0.2 ) [CRAN] 2021-05-18T14:19:23.6024371Z rversions (NA -> 2.0.2 ) [CRAN] 2021-05-18T14:19:23.6025115Z roxygen2 (NA -> 7.1.1 ) [CRAN] 2021-05-18T14:19:23.6025838Z rcmdcheck (NA -> 1.3.3 ) [CRAN] 2021-05-18T14:19:23.6026581Z devtools (NA -> 2.4.1 ) [CRAN] 2021-05-18T14:19:38.1057460Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/utf8_1.2.1.tar.gz' 2021-05-18T14:19:38.3884520Z Content type 'binary/octet-stream' length 237667 bytes (232 KB) 2021-05-18T14:19:38.4050500Z ================================================== 2021-05-18T14:19:38.4051596Z downloaded 232 KB 2021-05-18T14:19:38.4052082Z 2021-05-18T14:19:38.4084569Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/vctrs_0.3.8.tar.gz' 2021-05-18T14:19:38.6003862Z Content type 'binary/octet-stream' length 784938 bytes (766 KB) 2021-05-18T14:19:38.6297394Z ================================================== 2021-05-18T14:19:38.6298537Z downloaded 766 KB 2021-05-18T14:19:38.6299065Z 2021-05-18T14:19:38.6337431Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgconfig_2.0.3.tar.gz' 2021-05-18T14:19:38.8024022Z Content type 'application/x-tar' length 6108 bytes 2021-05-18T14:19:38.8025794Z ================================================== 2021-05-18T14:19:38.8026522Z downloaded 6108 bytes 2021-05-18T14:19:38.8027032Z 2021-05-18T14:19:38.8059664Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pillar_1.6.1.tar.gz' 2021-05-18T14:19:39.0805385Z Content type 'binary/octet-stream' length 1114809 bytes (1.1 MB) 2021-05-18T14:19:39.1127578Z ================================================== 2021-05-18T14:19:39.1128598Z downloaded 1.1 MB 2021-05-18T14:19:39.1129081Z 2021-05-18T14:19:39.1164430Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tibble_3.1.2.tar.gz' 2021-05-18T14:19:39.3957009Z Content type 'binary/octet-stream' length 689638 bytes (673 KB) 2021-05-18T14:19:39.4189606Z ================================================== 2021-05-18T14:19:39.4190200Z downloaded 673 KB 2021-05-18T14:19:39.4190485Z 2021-05-18T14:19:39.4230436Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rematch2_2.1.2.tar.gz' 2021-05-18T14:19:39.5905263Z Content type 'binary/octet-stream' length 13441 bytes (13 KB) 2021-05-18T14:19:39.5907449Z ================================================== 2021-05-18T14:19:39.5907900Z downloaded 13 KB 2021-05-18T14:19:39.5908172Z 2021-05-18T14:19:39.5945323Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fansi_0.4.2.tar.gz' 2021-05-18T14:19:39.8765949Z Content type 'binary/octet-stream' length 270970 bytes (264 KB) 2021-05-18T14:19:39.8928566Z ================================================== 2021-05-18T14:19:39.8929615Z downloaded 264 KB 2021-05-18T14:19:39.8930188Z 2021-05-18T14:19:39.8966911Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/diffobj_0.3.4.tar.gz' 2021-05-18T14:19:40.2851125Z Content type 'binary/octet-stream' length 476003 bytes (464 KB) 2021-05-18T14:19:40.3081378Z ================================================== 2021-05-18T14:19:40.3081947Z downloaded 464 KB 2021-05-18T14:19:40.3082262Z 2021-05-18T14:19:40.3122956Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/waldo_0.2.5.tar.gz' 2021-05-18T14:19:40.5924586Z Content type 'binary/octet-stream' length 26261 bytes (25 KB) 2021-05-18T14:19:40.5930058Z ================================================== 2021-05-18T14:19:40.5930540Z downloaded 25 KB 2021-05-18T14:19:40.5930798Z 2021-05-18T14:19:40.5968389Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ps_1.6.0.tar.gz' 2021-05-18T14:19:40.8776356Z Content type 'binary/octet-stream' length 120042 bytes (117 KB) 2021-05-18T14:19:40.8907314Z ================================================== 2021-05-18T14:19:40.8908056Z downloaded 117 KB 2021-05-18T14:19:40.8908344Z 2021-05-18T14:19:40.8946969Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/processx_3.5.2.tar.gz' 2021-05-18T14:19:41.0844842Z Content type 'binary/octet-stream' length 141949 bytes (138 KB) 2021-05-18T14:19:41.0960830Z ================================================== 2021-05-18T14:19:41.0961391Z downloaded 138 KB 2021-05-18T14:19:41.0961669Z 2021-05-18T14:19:41.1000271Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/praise_1.0.0.tar.gz' 2021-05-18T14:19:41.2899810Z Content type 'application/x-tar' length 6100 bytes 2021-05-18T14:19:41.2902210Z ================================================== 2021-05-18T14:19:41.2902753Z downloaded 6100 bytes 2021-05-18T14:19:41.2903084Z 2021-05-18T14:19:41.2944406Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgload_1.2.1.tar.gz' 2021-05-18T14:19:41.5785572Z Content type 'binary/octet-stream' length 60723 bytes (59 KB) 2021-05-18T14:19:41.5837174Z ================================================== 2021-05-18T14:19:41.5837913Z downloaded 59 KB 2021-05-18T14:19:41.5838350Z 2021-05-18T14:19:41.5874466Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/evaluate_0.14.tar.gz' 2021-05-18T14:19:41.9716775Z Content type 'application/x-tar' length 23661 bytes (23 KB) 2021-05-18T14:19:41.9718384Z ================================================== 2021-05-18T14:19:41.9719111Z downloaded 23 KB 2021-05-18T14:19:41.9720016Z 2021-05-18T14:19:41.9752629Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ellipsis_0.3.2.tar.gz' 2021-05-18T14:19:42.2240366Z Content type 'binary/octet-stream' length 8130 bytes 2021-05-18T14:19:42.2241057Z ================================================== 2021-05-18T14:19:42.2242702Z downloaded 8130 bytes 2021-05-18T14:19:42.2243013Z 2021-05-18T14:19:42.2283634Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/digest_0.6.27.tar.gz' 2021-05-18T14:19:42.5090884Z Content type 'binary/octet-stream' length 164442 bytes (160 KB) 2021-05-18T14:19:42.5216209Z ================================================== 2021-05-18T14:19:42.5216730Z downloaded 160 KB 2021-05-18T14:19:42.5217006Z 2021-05-18T14:19:42.5254346Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/callr_3.7.0.tar.gz' 2021-05-18T14:19:42.9155938Z Content type 'binary/octet-stream' length 74923 bytes (73 KB) 2021-05-18T14:19:42.9218564Z ================================================== 2021-05-18T14:19:42.9219062Z downloaded 73 KB 2021-05-18T14:19:42.9219341Z 2021-05-18T14:19:42.9259903Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brio_1.1.2.tar.gz' 2021-05-18T14:19:43.1129131Z Content type 'binary/octet-stream' length 12096 bytes (11 KB) 2021-05-18T14:19:43.1131311Z ================================================== 2021-05-18T14:19:43.1131798Z downloaded 11 KB 2021-05-18T14:19:43.1132072Z 2021-05-18T14:19:43.1173234Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xml2_1.3.2.tar.gz' 2021-05-18T14:19:43.3937991Z Content type 'binary/octet-stream' length 272736 bytes (266 KB) 2021-05-18T14:19:43.4119302Z ================================================== 2021-05-18T14:19:43.4120051Z downloaded 266 KB 2021-05-18T14:19:43.4120316Z 2021-05-18T14:19:43.4161441Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xfun_0.23.tar.gz' 2021-05-18T14:19:43.5985815Z Content type 'binary/octet-stream' length 111996 bytes (109 KB) 2021-05-18T14:19:43.6096921Z ================================================== 2021-05-18T14:19:43.6097939Z downloaded 109 KB 2021-05-18T14:19:43.6098451Z 2021-05-18T14:19:43.6133302Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/markdown_1.1.tar.gz' 2021-05-18T14:19:43.8912754Z Content type 'application/x-tar' length 81636 bytes (79 KB) 2021-05-18T14:19:43.8973611Z ================================================== 2021-05-18T14:19:43.8974535Z downloaded 79 KB 2021-05-18T14:19:43.8975050Z 2021-05-18T14:19:43.9008365Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/highr_0.9.tar.gz' 2021-05-18T14:19:44.1647680Z Content type 'binary/octet-stream' length 15361 bytes (15 KB) 2021-05-18T14:19:44.1649313Z ================================================== 2021-05-18T14:19:44.1650011Z downloaded 15 KB 2021-05-18T14:19:44.1650500Z 2021-05-18T14:19:44.1683311Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringr_1.4.0.tar.gz' 2021-05-18T14:19:44.3564089Z Content type 'application/x-tar' length 135526 bytes (132 KB) 2021-05-18T14:19:44.3676758Z ================================================== 2021-05-18T14:19:44.3677750Z downloaded 132 KB 2021-05-18T14:19:44.3678361Z 2021-05-18T14:19:44.3713128Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringi_1.6.2.tar.gz' 2021-05-18T14:19:44.7565642Z Content type 'binary/octet-stream' length 7578882 bytes (7.2 MB) 2021-05-18T14:19:44.8115785Z ================================================== 2021-05-18T14:19:44.8118858Z downloaded 7.2 MB 2021-05-18T14:19:44.8119168Z 2021-05-18T14:19:44.8154490Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/Rcpp_1.0.6.tar.gz' 2021-05-18T14:19:45.2059955Z Content type 'binary/octet-stream' length 2954251 bytes (2.8 MB) 2021-05-18T14:19:45.2768432Z ================================================== 2021-05-18T14:19:45.2768975Z downloaded 2.8 MB 2021-05-18T14:19:45.2769262Z 2021-05-18T14:19:45.2808655Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/knitr_1.33.tar.gz' 2021-05-18T14:19:45.4680860Z Content type 'binary/octet-stream' length 890176 bytes (869 KB) 2021-05-18T14:19:45.4956318Z ================================================== 2021-05-18T14:19:45.4957321Z downloaded 869 KB 2021-05-18T14:19:45.4957959Z 2021-05-18T14:19:45.4994548Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/commonmark_1.7.tar.gz' 2021-05-18T14:19:45.7836148Z Content type 'application/x-tar' length 134376 bytes (131 KB) 2021-05-18T14:19:45.7943665Z ================================================== 2021-05-18T14:19:45.7944499Z downloaded 131 KB 2021-05-18T14:19:45.7945019Z 2021-05-18T14:19:45.7983652Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brew_1.0-6.tar.gz' 2021-05-18T14:19:45.9851900Z Content type 'application/x-tar' length 83765 bytes (81 KB) 2021-05-18T14:19:45.9915363Z ================================================== 2021-05-18T14:19:45.9915881Z downloaded 81 KB 2021-05-18T14:19:45.9916157Z 2021-05-18T14:19:45.9953706Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xopen_1.0.0.tar.gz' 2021-05-18T14:19:46.1997706Z Content type 'application/x-tar' length 11313 bytes (11 KB) 2021-05-18T14:19:46.1998838Z ================================================== 2021-05-18T14:19:46.2000892Z downloaded 11 KB 2021-05-18T14:19:46.2001435Z 2021-05-18T14:19:46.2039882Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sessioninfo_1.1.1.tar.gz' 2021-05-18T14:19:46.4235692Z Content type 'application/x-tar' length 45020 bytes (43 KB) 2021-05-18T14:19:46.4285955Z ================================================== 2021-05-18T14:19:46.4286928Z downloaded 43 KB 2021-05-18T14:19:46.4287443Z 2021-05-18T14:19:46.4319839Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/prettyunits_1.1.1.tar.gz' 2021-05-18T14:19:46.6384112Z Content type 'binary/octet-stream' length 10377 bytes (10 KB) 2021-05-18T14:19:46.6385366Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rversions_2.0.2.tar.gz' 2021-05-18T14:19:47.4204582Z Content type 'binary/octet-stream' length 40913 bytes (39 KB) 2021-05-18T14:19:47.4217755Z ================================================== 2021-05-18T14:19:47.4218244Z downloaded 39 KB 2021-05-18T14:19:47.4218502Z 2021-05-18T14:19:47.4256087Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/roxygen2_7.1.1.tar.gz' 2021-05-18T14:19:47.6067479Z Content type 'binary/octet-stream' length 255098 bytes (249 KB) 2021-05-18T14:19:47.6227633Z ================================================== 2021-05-18T14:19:47.6228183Z downloaded 249 KB 2021-05-18T14:19:47.6228458Z 2021-05-18T14:19:47.6267833Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rcmdcheck_1.3.3.tar.gz' 2021-05-18T14:19:47.8180809Z Content type 'application/x-tar' length 44991 bytes (43 KB) 2021-05-18T14:19:47.8234278Z ================================================== 2021-05-18T14:19:47.8234767Z downloaded 43 KB 2021-05-18T14:19:47.8235048Z 2021-05-18T14:19:47.8273544Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/devtools_2.4.1.tar.gz' 2021-05-18T14:19:48.0600710Z Content type 'binary/octet-stream' length 370450 bytes (361 KB) 2021-05-18T14:19:48.0793434Z ================================================== 2021-05-18T14:19:48.0793984Z downloaded 361 KB 2021-05-18T14:19:48.0794258Z 2021-05-18T14:19:48.3942957Z * installing *source* package ‘utf8’ ... 2021-05-18T14:19:48.4005777Z ** package ‘utf8’ successfully unpacked and MD5 sums checked 2021-05-18T14:19:48.4007452Z ** using staged installation 2021-05-18T14:19:48.4140307Z ** libs 2021-05-18T14:19:48.4195348Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c as_utf8.c -o as_utf8.o 2021-05-18T14:19:48.4848481Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c bytes.c -o bytes.o 2021-05-18T14:19:48.6235586Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c context.c -o context.o 2021-05-18T14:19:48.6830697Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:19:48.7237721Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c render.c -o render.o 2021-05-18T14:19:48.7847950Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c render_table.c -o render_table.o 2021-05-18T14:19:48.9414373Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c string.c -o string.o 2021-05-18T14:19:49.0007332Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c text.c -o text.o 2021-05-18T14:19:49.1261413Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_encode.c -o utf8_encode.o 2021-05-18T14:19:49.2031226Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_format.c -o utf8_format.o 2021-05-18T14:19:49.2892934Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_normalize.c -o utf8_normalize.o 2021-05-18T14:19:49.3561825Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_valid.c -o utf8_valid.o 2021-05-18T14:19:49.4134491Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_width.c -o utf8_width.o 2021-05-18T14:19:49.4738197Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c util.c -o util.o 2021-05-18T14:19:49.5268132Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/array.c -o utf8lite/src/array.o 2021-05-18T14:19:49.5807170Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/char.c -o utf8lite/src/char.o 2021-05-18T14:19:49.6478327Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/encode.c -o utf8lite/src/encode.o 2021-05-18T14:19:49.7056123Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/error.c -o utf8lite/src/error.o 2021-05-18T14:19:49.7444699Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/escape.c -o utf8lite/src/escape.o 2021-05-18T14:19:49.8067486Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/graph.c -o utf8lite/src/graph.o 2021-05-18T14:19:49.8512124Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o 2021-05-18T14:19:50.0478202Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o 2021-05-18T14:19:50.3358703Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/render.c -o utf8lite/src/render.o 2021-05-18T14:19:50.5028697Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/text.c -o utf8lite/src/text.o 2021-05-18T14:19:50.5706231Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o 2021-05-18T14:19:50.6308351Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o 2021-05-18T14:19:50.7000492Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o 2021-05-18T14:19:50.7687998Z ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o 2021-05-18T14:19:50.7765287Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:19:50.8077802Z installing to /home/runner/work/_temp/Library/00LOCK-utf8/00new/utf8/libs 2021-05-18T14:19:50.8097476Z ** R 2021-05-18T14:19:50.8180465Z ** inst 2021-05-18T14:19:50.8189072Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:19:51.2677609Z ** help 2021-05-18T14:19:51.2963859Z *** installing help indices 2021-05-18T14:19:51.3203048Z ** building package indices 2021-05-18T14:19:51.5160544Z ** installing vignettes 2021-05-18T14:19:51.5203192Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:19:51.6975867Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:19:51.7157702Z ** testing if installed package can be loaded from final location 2021-05-18T14:19:51.8930288Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:19:51.8938608Z * DONE (utf8) 2021-05-18T14:19:52.1037557Z * installing *source* package ‘pkgconfig’ ... 2021-05-18T14:19:52.1051446Z ** package ‘pkgconfig’ successfully unpacked and MD5 sums checked 2021-05-18T14:19:52.1054404Z ** using staged installation 2021-05-18T14:19:52.1167005Z ** R 2021-05-18T14:19:52.1194312Z ** inst 2021-05-18T14:19:52.1204427Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:19:52.3524769Z ** help 2021-05-18T14:19:52.3740749Z *** installing help indices 2021-05-18T14:19:52.3907148Z ** building package indices 2021-05-18T14:19:52.5792542Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:19:52.7520597Z ** testing if installed package can be loaded from final location 2021-05-18T14:19:52.9233189Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:19:52.9238784Z * DONE (pkgconfig) 2021-05-18T14:19:53.1948226Z * installing *source* package ‘fansi’ ... 2021-05-18T14:19:53.1982311Z ** package ‘fansi’ successfully unpacked and MD5 sums checked 2021-05-18T14:19:53.1983533Z ** using staged installation 2021-05-18T14:19:53.2111972Z ** libs 2021-05-18T14:19:53.2197102Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c assumptions.c -o assumptions.o 2021-05-18T14:19:53.2590769Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c has.c -o has.o 2021-05-18T14:19:53.3195778Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:19:53.3654233Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c nchar.c -o nchar.o 2021-05-18T14:19:53.4345913Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read.c -o read.o 2021-05-18T14:19:53.8702760Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rnchar.c -o rnchar.o 2021-05-18T14:19:53.9077322Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c state.c -o state.o 2021-05-18T14:19:54.2554537Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c strip.c -o strip.o 2021-05-18T14:19:54.3893981Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c strsplit.c -o strsplit.o 2021-05-18T14:19:54.4349116Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c tabs.c -o tabs.o 2021-05-18T14:19:54.5561344Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c tohtml.c -o tohtml.o 2021-05-18T14:19:54.7930742Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unhandled.c -o unhandled.o 2021-05-18T14:19:54.8922071Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unique.c -o unique.o 2021-05-18T14:19:54.9467613Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-18T14:19:55.0046805Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-18T14:19:55.1630622Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c wrap.c -o wrap.o 2021-05-18T14:19:55.4628203Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fansi.so assumptions.o has.o init.o nchar.o read.o rnchar.o state.o strip.o strsplit.o tabs.o tohtml.o unhandled.o unique.o utf8.o utils.o wrap.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:19:55.4921653Z installing to /home/runner/work/_temp/Library/00LOCK-fansi/00new/fansi/libs 2021-05-18T14:19:55.4928802Z ** R 2021-05-18T14:19:55.5024787Z ** inst 2021-05-18T14:19:55.5033934Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:19:56.1055280Z ** help 2021-05-18T14:19:56.1692894Z *** installing help indices 2021-05-18T14:19:56.2065328Z ** building package indices 2021-05-18T14:19:56.4250780Z ** installing vignettes 2021-05-18T14:19:56.4305622Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:19:56.6085551Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:19:56.6270826Z ** testing if installed package can be loaded from final location 2021-05-18T14:19:56.8054654Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:19:56.8064279Z * DONE (fansi) 2021-05-18T14:19:57.2365331Z * installing *source* package ‘diffobj’ ... 2021-05-18T14:19:57.2463356Z ** package ‘diffobj’ successfully unpacked and MD5 sums checked 2021-05-18T14:19:57.2465931Z ** using staged installation 2021-05-18T14:19:57.2611878Z ** libs 2021-05-18T14:19:57.2658925Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diff.c -o diff.o 2021-05-18T14:19:57.4626168Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffobj.c -o diffobj.o 2021-05-18T14:19:57.5219227Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:19:57.5676997Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o diffobj.so diff.o diffobj.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:19:57.5921460Z installing to /home/runner/work/_temp/Library/00LOCK-diffobj/00new/diffobj/libs 2021-05-18T14:19:57.5922668Z ** R 2021-05-18T14:19:57.6313243Z ** inst 2021-05-18T14:19:57.6329150Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:20:04.1340831Z ** help 2021-05-18T14:20:04.3339879Z *** installing help indices 2021-05-18T14:20:04.4892499Z ** building package indices 2021-05-18T14:20:04.7760540Z ** installing vignettes 2021-05-18T14:20:04.7826923Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:20:05.0826922Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:20:05.1003613Z ** testing if installed package can be loaded from final location 2021-05-18T14:20:05.5206910Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:20:05.5281446Z * DONE (diffobj) 2021-05-18T14:20:05.8249592Z * installing *source* package ‘ps’ ... 2021-05-18T14:20:05.8291938Z ** package ‘ps’ successfully unpacked and MD5 sums checked 2021-05-18T14:20:05.8295815Z ** using staged installation 2021-05-18T14:20:06.0277852Z ** libs 2021-05-18T14:20:06.0332120Z gcc -g -O2 -Wall px.c -o px 2021-05-18T14:20:06.1602165Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:20:06.2257248Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-common.c -o api-common.o 2021-05-18T14:20:06.2918847Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c common.c -o common.o 2021-05-18T14:20:06.3571260Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c extra.c -o extra.o 2021-05-18T14:20:06.5134122Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dummy.c -o dummy.o 2021-05-18T14:20:06.5649199Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error-codes.c -o error-codes.o 2021-05-18T14:20:06.8426994Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c posix.c -o posix.o 2021-05-18T14:20:07.0229685Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-posix.c -o api-posix.o 2021-05-18T14:20:07.1228571Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c linux.c -o linux.o 2021-05-18T14:20:07.2672136Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-linux.c -o api-linux.o 2021-05-18T14:20:07.6967121Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o ps.so init.o api-common.o common.o extra.o dummy.o error-codes.o posix.o api-posix.o linux.o api-linux.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:20:07.7243144Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-ps/00new/ps 2021-05-18T14:20:07.7279723Z ** R 2021-05-18T14:20:07.7384050Z ** inst 2021-05-18T14:20:07.7394612Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:20:08.7938756Z ** help 2021-05-18T14:20:08.9314684Z *** installing help indices 2021-05-18T14:20:09.0242668Z ** building package indices 2021-05-18T14:20:09.3001383Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:20:09.4863788Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:20:09.5045957Z ** testing if installed package can be loaded from final location 2021-05-18T14:20:09.7011399Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:20:09.7025021Z * DONE (ps) 2021-05-18T14:20:09.9122446Z * installing *source* package ‘praise’ ... 2021-05-18T14:20:09.9131045Z ** package ‘praise’ successfully unpacked and MD5 sums checked 2021-05-18T14:20:09.9132107Z ** using staged installation 2021-05-18T14:20:09.9236297Z ** R 2021-05-18T14:20:09.9273344Z ** inst 2021-05-18T14:20:09.9282253Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:20:10.1560466Z ** help 2021-05-18T14:20:10.1670361Z *** installing help indices 2021-05-18T14:20:10.1894659Z ** building package indices 2021-05-18T14:20:10.3819144Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:20:10.5677493Z ** testing if installed package can be loaded from final location 2021-05-18T14:20:10.7459191Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:20:10.7464905Z * DONE (praise) 2021-05-18T14:20:11.0746295Z * installing *source* package ‘pkgload’ ... 2021-05-18T14:20:11.0794156Z ** package ‘pkgload’ successfully unpacked and MD5 sums checked 2021-05-18T14:20:11.0795548Z ** using staged installation 2021-05-18T14:20:11.0939974Z ** R 2021-05-18T14:20:11.1041688Z ** inst 2021-05-18T14:20:11.1048647Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:20:11.9672891Z ** help 2021-05-18T14:20:12.0203075Z *** installing help indices 2021-05-18T14:20:12.0657099Z ** building package indices 2021-05-18T14:20:12.2918192Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:20:12.7560194Z ** testing if installed package can be loaded from final location 2021-05-18T14:20:13.2357546Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:20:13.2370359Z * DONE (pkgload) 2021-05-18T14:20:13.4795238Z * installing *source* package ‘evaluate’ ... 2021-05-18T14:20:13.4813485Z ** package ‘evaluate’ successfully unpacked and MD5 sums checked 2021-05-18T14:20:13.4814762Z ** using staged installation 2021-05-18T14:20:13.4953146Z ** R 2021-05-18T14:20:13.5005793Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:20:13.9960411Z ** help 2021-05-18T14:20:14.0222424Z *** installing help indices 2021-05-18T14:20:14.0540445Z ** building package indices 2021-05-18T14:20:14.2596381Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:20:14.4398964Z ** testing if installed package can be loaded from final location 2021-05-18T14:20:14.6240994Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:20:14.6248800Z * DONE (evaluate) 2021-05-18T14:20:14.8402928Z * installing *source* package ‘ellipsis’ ... 2021-05-18T14:20:14.8418031Z ** package ‘ellipsis’ successfully unpacked and MD5 sums checked 2021-05-18T14:20:14.8421114Z ** using staged installation 2021-05-18T14:20:14.8563981Z ** libs 2021-05-18T14:20:14.8617269Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dots.c -o dots.o 2021-05-18T14:20:14.9350572Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:20:14.9814642Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o ellipsis.so dots.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:20:15.0037179Z installing to /home/runner/work/_temp/Library/00LOCK-ellipsis/00new/ellipsis/libs 2021-05-18T14:20:15.0051573Z ** R 2021-05-18T14:20:15.0084737Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:20:15.2761321Z ** help 2021-05-18T14:20:15.3010831Z *** installing help indices 2021-05-18T14:20:15.3207559Z ** building package indices 2021-05-18T14:20:15.5181204Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:20:15.7151594Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:20:15.7328168Z ** testing if installed package can be loaded from final location 2021-05-18T14:20:15.9277690Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:20:15.9284220Z * DONE (ellipsis) 2021-05-18T14:20:16.1971210Z * installing *source* package ‘digest’ ... 2021-05-18T14:20:16.2006263Z ** package ‘digest’ successfully unpacked and MD5 sums checked 2021-05-18T14:20:16.2009425Z ** using staged installation 2021-05-18T14:20:16.2121168Z ** libs 2021-05-18T14:20:16.2181492Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c SpookyV2.cpp -o SpookyV2.o 2021-05-18T14:20:16.3898932Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o 2021-05-18T14:20:16.6935388Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3.c -o blake3.o 2021-05-18T14:20:17.4993232Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3_dispatch.c -o blake3_dispatch.o 2021-05-18T14:20:17.7268945Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3_portable.c -o blake3_portable.o 2021-05-18T14:20:18.2634545Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c crc32.c -o crc32.o 2021-05-18T14:20:18.3374310Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest.c -o digest.o 2021-05-18T14:20:18.5485610Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest2int.c -o digest2int.o 2021-05-18T14:20:18.6057984Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:20:18.6294532Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c md5.c -o md5.o 2021-05-18T14:20:18.7686753Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pmurhash.c -o pmurhash.o 2021-05-18T14:20:18.8203197Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c raes.c -o raes.o 2021-05-18T14:20:18.8925646Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha1.c -o sha1.o 2021-05-18T14:20:19.1803577Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha2.c -o sha2.o 2021-05-18T14:20:19.2934095Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha256.c -o sha256.o 2021-05-18T14:20:19.8484005Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c spooky_serialize.cpp -o spooky_serialize.o 2021-05-18T14:20:19.9617114Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c xxhash.c -o xxhash.o 2021-05-18T14:20:20.2051492Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o digest.so SpookyV2.o aes.o blake3.o blake3_dispatch.o blake3_portable.o crc32.o digest.o digest2int.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o spooky_serialize.o xxhash.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:20:20.2489110Z installing to /home/runner/work/_temp/Library/00LOCK-digest/00new/digest/libs 2021-05-18T14:20:20.2510494Z ** R 2021-05-18T14:20:20.2568833Z ** demo 2021-05-18T14:20:20.2575047Z ** inst 2021-05-18T14:20:20.2592914Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:20:20.7983035Z ** help 2021-05-18T14:20:20.8360729Z *** installing help indices 2021-05-18T14:20:20.8627850Z ** building package indices 2021-05-18T14:20:21.0680568Z ** installing vignettes 2021-05-18T14:20:21.0730321Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:20:21.2611488Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:20:21.2797567Z ** testing if installed package can be loaded from final location 2021-05-18T14:20:21.4727694Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:20:21.4739233Z * DONE (digest) 2021-05-18T14:20:21.7001782Z * installing *source* package ‘brio’ ... 2021-05-18T14:20:21.7014708Z ** package ‘brio’ successfully unpacked and MD5 sums checked 2021-05-18T14:20:21.7015772Z ** using staged installation 2021-05-18T14:20:21.7206534Z ** libs 2021-05-18T14:20:21.7255937Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c brio.c -o brio.o 2021-05-18T14:20:21.7640837Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c file_line_endings.c -o file_line_endings.o 2021-05-18T14:20:21.8139262Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:20:21.8590540Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_file.c -o read_file.o 2021-05-18T14:20:21.9115322Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_file_raw.c -o read_file_raw.o 2021-05-18T14:20:21.9653855Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_lines.c -o read_lines.o 2021-05-18T14:20:22.0481900Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write_file.c -o write_file.o 2021-05-18T14:20:22.0961342Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write_lines.c -o write_lines.o 2021-05-18T14:20:22.1543426Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o brio.so brio.o file_line_endings.o init.o read_file.o read_file_raw.o read_lines.o write_file.o write_lines.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:20:22.1801598Z installing to /home/runner/work/_temp/Library/00LOCK-brio/00new/brio/libs 2021-05-18T14:20:22.1802933Z ** R 2021-05-18T14:20:22.1831231Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:20:22.4165817Z ** help 2021-05-18T14:20:22.4361581Z *** installing help indices 2021-05-18T14:20:22.4560100Z ** building package indices 2021-05-18T14:20:22.6528809Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:20:22.8357486Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:20:22.8538015Z ** testing if installed package can be loaded from final location 2021-05-18T14:20:23.0307479Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:20:23.0312964Z * DONE (brio) 2021-05-18T14:20:23.3242494Z * installing *source* package ‘xml2’ ... 2021-05-18T14:20:23.3281730Z ** package ‘xml2’ successfully unpacked and MD5 sums checked 2021-05-18T14:20:23.3282830Z ** using staged installation 2021-05-18T14:20:23.3427853Z Found pkg-config cflags and libs! 2021-05-18T14:20:23.4264226Z Using PKG_CFLAGS=-I/usr/include/libxml2 2021-05-18T14:20:23.4265424Z Using PKG_LIBS=-lxml2 2021-05-18T14:20:23.5170837Z ** libs 2021-05-18T14:20:23.5224334Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c connection.cpp -o connection.o 2021-05-18T14:20:24.0062320Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:20:24.0529345Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_doc.cpp -o xml2_doc.o 2021-05-18T14:20:24.5979245Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_init.cpp -o xml2_init.o 2021-05-18T14:20:25.0161061Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_namespace.cpp -o xml2_namespace.o 2021-05-18T14:20:25.7072156Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_node.cpp -o xml2_node.o 2021-05-18T14:20:27.5419545Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_output.cpp -o xml2_output.o 2021-05-18T14:20:28.0723329Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_schema.cpp -o xml2_schema.o 2021-05-18T14:20:28.6466968Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_url.cpp -o xml2_url.o 2021-05-18T14:20:29.1055366Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_xpath.cpp -o xml2_xpath.o 2021-05-18T14:20:29.5323181Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o xml2.so connection.o init.o xml2_doc.o xml2_init.o xml2_namespace.o xml2_node.o xml2_output.o xml2_schema.o xml2_url.o xml2_xpath.o -lxml2 -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:20:29.6326526Z installing to /home/runner/work/_temp/Library/00LOCK-xml2/00new/xml2/libs 2021-05-18T14:20:29.6356359Z ** R 2021-05-18T14:20:29.6465042Z ** inst 2021-05-18T14:20:29.6478121Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:20:30.5901265Z ** help 2021-05-18T14:20:30.6837689Z *** installing help indices 2021-05-18T14:20:30.7351170Z ** building package indices 2021-05-18T14:20:30.9680500Z ** installing vignettes 2021-05-18T14:20:30.9753387Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:20:31.1682451Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:20:31.1872953Z ** testing if installed package can be loaded from final location 2021-05-18T14:20:31.3931884Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:20:31.3946144Z * DONE (xml2) 2021-05-18T14:20:31.6748389Z * installing *source* package ‘xfun’ ... 2021-05-18T14:20:31.6781681Z ** package ‘xfun’ successfully unpacked and MD5 sums checked 2021-05-18T14:20:31.6782860Z ** using staged installation 2021-05-18T14:20:31.6933926Z ** libs 2021-05-18T14:20:31.7018377Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-18T14:20:31.8006381Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:20:31.8469230Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o xfun.so base64.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:20:31.8812070Z installing to /home/runner/work/_temp/Library/00LOCK-xfun/00new/xfun/libs 2021-05-18T14:20:31.8824489Z ** R 2021-05-18T14:20:31.8967412Z ** inst 2021-05-18T14:20:31.8979466Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:20:33.2510355Z ** help 2021-05-18T14:20:33.3945405Z *** installing help indices 2021-05-18T14:20:33.4981673Z ** building package indices 2021-05-18T14:20:33.7801578Z ** installing vignettes 2021-05-18T14:20:33.7867541Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:20:33.9739728Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:20:33.9917207Z ** testing if installed package can be loaded from final location 2021-05-18T14:20:34.1935147Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:20:34.1950713Z * DONE (xfun) 2021-05-18T14:20:36.6783317Z * installing *source* package ‘stringi’ ... 2021-05-18T14:20:36.7895096Z ** package ‘stringi’ successfully unpacked and MD5 sums checked 2021-05-18T14:20:36.7896459Z ** using staged installation 2021-05-18T14:20:36.9082680Z checking for R_HOME... /opt/R/devel/lib/R 2021-05-18T14:20:36.9084199Z checking for R... /opt/R/devel/lib/R/bin/R 2021-05-18T14:20:37.0677247Z checking for endianness... little 2021-05-18T14:20:37.2288524Z checking for R >= 3.1.0 for C++11 use... yes 2021-05-18T14:20:37.3893498Z checking for R < 3.4.0 for CXX1X flag use... no 2021-05-18T14:20:37.3897990Z checking for cat... /usr/bin/cat 2021-05-18T14:20:37.6089216Z checking for local ICUDT_DIR... icu69/data 2021-05-18T14:20:37.6090279Z checking for gcc... gcc 2021-05-18T14:20:37.6677498Z checking whether the C compiler works... yes 2021-05-18T14:20:37.6678963Z checking for C compiler default output file name... a.out 2021-05-18T14:20:37.7058367Z checking for suffix of executables... 2021-05-18T14:20:37.7522506Z checking whether we are cross compiling... no 2021-05-18T14:20:37.7767606Z checking for suffix of object files... o 2021-05-18T14:20:37.7992378Z checking whether we are using the GNU C compiler... yes 2021-05-18T14:20:37.8211613Z checking whether gcc accepts -g... yes 2021-05-18T14:20:37.8573554Z checking for gcc option to accept ISO C89... none needed 2021-05-18T14:20:37.8780383Z checking how to run the C preprocessor... gcc -E 2021-05-18T14:20:37.9009021Z checking for grep that handles long lines and -e... /usr/bin/grep 2021-05-18T14:20:37.9025012Z checking for egrep... /usr/bin/grep -E 2021-05-18T14:20:38.0097001Z checking for ANSI C header files... yes 2021-05-18T14:20:38.0385896Z checking for sys/types.h... yes 2021-05-18T14:20:38.0727337Z checking for sys/stat.h... yes 2021-05-18T14:20:38.1064609Z checking for stdlib.h... yes 2021-05-18T14:20:38.1417840Z checking for string.h... yes 2021-05-18T14:20:38.1768909Z checking for memory.h... yes 2021-05-18T14:20:38.2124157Z checking for strings.h... yes 2021-05-18T14:20:38.2483021Z checking for inttypes.h... yes 2021-05-18T14:20:38.2841127Z checking for stdint.h... yes 2021-05-18T14:20:38.3231409Z checking for unistd.h... yes 2021-05-18T14:20:38.3770950Z checking elf.h usability... yes 2021-05-18T14:20:38.3881741Z checking elf.h presence... yes 2021-05-18T14:20:38.3882702Z checking for elf.h... yes 2021-05-18T14:20:38.4319199Z checking whether we are using the GNU C++ compiler... yes 2021-05-18T14:20:38.4546430Z checking whether g++ -std=gnu++11 accepts -g... yes 2021-05-18T14:20:38.7620469Z checking whether the C++ compiler supports the long long type... yes 2021-05-18T14:20:38.7870166Z checking whether the compiler implements namespaces... yes 2021-05-18T14:20:38.9147295Z checking whether the compiler supports Standard Template Library... yes 2021-05-18T14:20:39.4296032Z checking whether std::map is available... yes 2021-05-18T14:20:39.4318847Z checking for pkg-config... /usr/bin/pkg-config 2021-05-18T14:20:39.4368173Z checking with pkg-config for the system ICU4C... 66.1 2021-05-18T14:20:39.4390322Z checking for ICU4C >= 55... yes 2021-05-18T14:20:39.4457015Z checking for additional required CPPFLAGS, LDFLAGS, and LIBS... done 2021-05-18T14:20:39.7382027Z checking whether an ICU4C-based project can be built... yes 2021-05-18T14:20:39.7993057Z checking programmatically for sufficient U_ICU_VERSION_MAJOR_NUM... yes 2021-05-18T14:20:40.0741484Z checking programmatically if U_CHARSET_IS_UTF8 is defined and set... yes 2021-05-18T14:20:41.0476500Z checking the capabilities of the ICU data library (ucnv, uloc, utrans)... yes 2021-05-18T14:20:41.6426232Z checking the capabilities of the ICU data library (ucol)... yes 2021-05-18T14:20:41.6783343Z configure: creating ./config.status 2021-05-18T14:20:41.7586356Z config.status: creating src/Makevars 2021-05-18T14:20:41.7754614Z config.status: creating src/uconfig_local.h 2021-05-18T14:20:41.7923581Z config.status: creating src/install.libs.R 2021-05-18T14:20:41.8095991Z 2021-05-18T14:20:41.8097259Z *** stringi configure summary: 2021-05-18T14:20:41.8097893Z ICU_FOUND=1 2021-05-18T14:20:41.8098514Z STRINGI_CXXSTD=CXX_STD=CXX11 2021-05-18T14:20:41.8099759Z STRINGI_CFLAGS= -fpic 2021-05-18T14:20:41.8100761Z STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H 2021-05-18T14:20:41.8101991Z STRINGI_CXXFLAGS= -fpic 2021-05-18T14:20:41.8103456Z STRINGI_LDFLAGS=-L/usr/lib/x86_64-linux-gnu 2021-05-18T14:20:41.8104299Z STRINGI_LIBS=-licui18n -licuuc -licudata 2021-05-18T14:20:41.8104670Z 2021-05-18T14:20:41.8111313Z *** Compiler settings used: 2021-05-18T14:20:41.8112049Z CC=gcc 2021-05-18T14:20:41.8112968Z LD=g++ -std=gnu++14 2021-05-18T14:20:41.8113591Z CFLAGS=-g -O2 -fpic 2021-05-18T14:20:41.8114345Z CPPFLAGS=-I/usr/local/include -UDEBUG -DNDEBUG 2021-05-18T14:20:41.8115046Z CXX=g++ -std=gnu++11 2021-05-18T14:20:41.8115641Z CXXFLAGS=-g -O2 -fpic 2021-05-18T14:20:41.8116069Z LDFLAGS= 2021-05-18T14:20:41.8116422Z LIBS= 2021-05-18T14:20:41.8116653Z 2021-05-18T14:20:41.8459142Z ** libs 2021-05-18T14:20:41.8547701Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_brkiter.cpp -o stri_brkiter.o 2021-05-18T14:20:42.5314313Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_collator.cpp -o stri_collator.o 2021-05-18T14:20:43.1528147Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_common.cpp -o stri_common.o 2021-05-18T14:20:43.7972319Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_compare.cpp -o stri_compare.o 2021-05-18T14:20:44.5155909Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_base.cpp -o stri_container_base.o 2021-05-18T14:20:45.0201035Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o 2021-05-18T14:20:45.8533085Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listint.cpp -o stri_container_listint.o 2021-05-18T14:20:46.4063312Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listraw.cpp -o stri_container_listraw.o 2021-05-18T14:20:46.9940449Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listutf8.cpp -o stri_container_listutf8.o 2021-05-18T14:20:47.5417291Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_regex.cpp -o stri_container_regex.o 2021-05-18T14:20:48.1801792Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_usearch.cpp -o stri_container_usearch.o 2021-05-18T14:20:48.8203305Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf16.cpp -o stri_container_utf16.o 2021-05-18T14:20:49.5416081Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8.cpp -o stri_container_utf8.o 2021-05-18T14:20:50.2164465Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o 2021-05-18T14:20:50.8201861Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o 2021-05-18T14:20:51.7655710Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_detection.cpp -o stri_encoding_detection.o 2021-05-18T14:20:53.3369809Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_management.cpp -o stri_encoding_management.o 2021-05-18T14:20:54.0168434Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_escape.cpp -o stri_escape.o 2021-05-18T14:20:54.6821924Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_exception.cpp -o stri_exception.o 2021-05-18T14:20:55.2053014Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ICU_settings.cpp -o stri_ICU_settings.o 2021-05-18T14:20:55.7307329Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_join.cpp -o stri_join.o 2021-05-18T14:20:56.6580021Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_length.cpp -o stri_length.o 2021-05-18T14:20:57.3289006Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_pad.cpp -o stri_pad.o 2021-05-18T14:20:57.9587645Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_prepare_arg.cpp -o stri_prepare_arg.o 2021-05-18T14:20:58.7536555Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_random.cpp -o stri_random.o 2021-05-18T14:20:59.5265343Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_reverse.cpp -o stri_reverse.o 2021-05-18T14:21:00.1005230Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_count.cpp -o stri_search_class_count.o 2021-05-18T14:21:00.7405627Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_detect.cpp -o stri_search_class_detect.o 2021-05-18T14:21:01.3841712Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_extract.cpp -o stri_search_class_extract.o 2021-05-18T14:21:02.2452812Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_locate.cpp -o stri_search_class_locate.o 2021-05-18T14:21:03.0867693Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_replace.cpp -o stri_search_class_replace.o 2021-05-18T14:21:04.0784188Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_split.cpp -o stri_search_class_split.o 2021-05-18T14:21:04.8936033Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o 2021-05-18T14:21:05.6200438Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_subset.cpp -o stri_search_class_subset.o 2021-05-18T14:21:06.3756009Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_trim.cpp -o stri_search_class_trim.o 2021-05-18T14:21:07.0335882Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_common.cpp -o stri_search_common.o 2021-05-18T14:21:07.6858386Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_count.cpp -o stri_search_coll_count.o 2021-05-18T14:21:08.3254794Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o 2021-05-18T14:21:08.9896272Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o 2021-05-18T14:21:10.1054263Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o 2021-05-18T14:21:10.6137245Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o 2021-05-18T14:21:11.4891615Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_split.cpp -o stri_search_coll_split.o 2021-05-18T14:21:12.3271169Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o 2021-05-18T14:21:13.0586096Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o 2021-05-18T14:21:13.8098201Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o 2021-05-18T14:21:14.3574980Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o 2021-05-18T14:21:15.0630421Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o 2021-05-18T14:21:15.7651459Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o 2021-05-18T14:21:16.4763942Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o 2021-05-18T14:21:17.0539411Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o 2021-05-18T14:21:17.6217468Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o 2021-05-18T14:21:18.3715565Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o 2021-05-18T14:21:19.1126537Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o 2021-05-18T14:21:19.9313762Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o 2021-05-18T14:21:20.7076596Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o 2021-05-18T14:21:21.4525149Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o 2021-05-18T14:21:22.1157415Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_in.cpp -o stri_search_in.o 2021-05-18T14:21:22.1314722Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_other_split.cpp -o stri_search_other_split.o 2021-05-18T14:21:22.9668208Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_count.cpp -o stri_search_regex_count.o 2021-05-18T14:21:23.5359828Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o 2021-05-18T14:21:24.1092684Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o 2021-05-18T14:21:24.8877737Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o 2021-05-18T14:21:25.6486752Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_match.cpp -o stri_search_regex_match.o 2021-05-18T14:21:26.5736925Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o 2021-05-18T14:21:27.2558759Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_split.cpp -o stri_search_regex_split.o 2021-05-18T14:21:28.0502770Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o 2021-05-18T14:21:28.7213923Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sort.cpp -o stri_sort.o 2021-05-18T14:21:30.2905740Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stats.cpp -o stri_stats.o 2021-05-18T14:21:30.9243718Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stringi.cpp -o stri_stringi.o 2021-05-18T14:21:31.5016876Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sub.cpp -o stri_sub.o 2021-05-18T14:21:32.3186473Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_test.cpp -o stri_test.o 2021-05-18T14:21:32.8598175Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_zone.cpp -o stri_time_zone.o 2021-05-18T14:21:33.4491905Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_calendar.cpp -o stri_time_calendar.o 2021-05-18T14:21:34.2682108Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_symbols.cpp -o stri_time_symbols.o 2021-05-18T14:21:35.0010868Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_format.cpp -o stri_time_format.o 2021-05-18T14:21:35.9357170Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_casemap.cpp -o stri_trans_casemap.o 2021-05-18T14:21:36.6205940Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_other.cpp -o stri_trans_other.o 2021-05-18T14:21:37.3412410Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_normalization.cpp -o stri_trans_normalization.o 2021-05-18T14:21:37.9669939Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o 2021-05-18T14:21:38.5533870Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ucnv.cpp -o stri_ucnv.o 2021-05-18T14:21:39.1668032Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_uloc.cpp -o stri_uloc.o 2021-05-18T14:21:39.6948337Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_utils.cpp -o stri_utils.o 2021-05-18T14:21:40.2629657Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_wrap.cpp -o stri_wrap.o 2021-05-18T14:21:41.6013714Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o stringi.so stri_brkiter.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_stats.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:21:41.8206256Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-stringi/00new/stringi 2021-05-18T14:21:41.9011269Z ** R 2021-05-18T14:21:41.9306000Z ** inst 2021-05-18T14:21:41.9314791Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:21:43.0144519Z ** help 2021-05-18T14:21:43.4751285Z *** installing help indices 2021-05-18T14:21:43.6846187Z ** building package indices 2021-05-18T14:21:44.0885520Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:21:44.2756551Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:21:44.2974579Z ** testing if installed package can be loaded from final location 2021-05-18T14:21:44.4994390Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:21:44.5009045Z * DONE (stringi) 2021-05-18T14:21:45.4626473Z * installing *source* package ‘Rcpp’ ... 2021-05-18T14:21:45.4977999Z ** package ‘Rcpp’ successfully unpacked and MD5 sums checked 2021-05-18T14:21:45.4979489Z ** using staged installation 2021-05-18T14:21:45.5094834Z ** libs 2021-05-18T14:21:45.5147595Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c api.cpp -o api.o 2021-05-18T14:21:48.4996782Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c attributes.cpp -o attributes.o 2021-05-18T14:22:03.8220533Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c barrier.cpp -o barrier.o 2021-05-18T14:22:04.0162101Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c date.cpp -o date.o 2021-05-18T14:22:07.2596488Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c module.cpp -o module.o 2021-05-18T14:22:13.4914472Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c rcpp_init.cpp -o rcpp_init.o 2021-05-18T14:22:16.3384889Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o Rcpp.so api.o attributes.o barrier.o date.o module.o rcpp_init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:22:16.5084183Z installing to /home/runner/work/_temp/Library/00LOCK-Rcpp/00new/Rcpp/libs 2021-05-18T14:22:16.5202785Z ** R 2021-05-18T14:22:16.5336409Z ** inst 2021-05-18T14:22:16.5725715Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:22:18.3258006Z ** help 2021-05-18T14:22:18.4195281Z *** installing help indices 2021-05-18T14:22:18.4818120Z ** building package indices 2021-05-18T14:22:18.7208961Z ** installing vignettes 2021-05-18T14:22:18.7271203Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:22:18.9973322Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:22:19.0214214Z ** testing if installed package can be loaded from final location 2021-05-18T14:22:19.3221797Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:22:19.3305036Z * DONE (Rcpp) 2021-05-18T14:22:19.6244047Z * installing *source* package ‘commonmark’ ... 2021-05-18T14:22:19.6283631Z ** package ‘commonmark’ successfully unpacked and MD5 sums checked 2021-05-18T14:22:19.6285641Z ** using staged installation 2021-05-18T14:22:19.6407078Z ** libs 2021-05-18T14:22:19.6459950Z rm -f cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o extensions.o init.o wrapper.o commonmark.so cmark/libstatcmark.a 2021-05-18T14:22:19.6494094Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions.c -o extensions.o 2021-05-18T14:22:19.6954497Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:22:19.7358555Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c wrapper.c -o wrapper.o 2021-05-18T14:22:19.7988209Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/cmark.c -o cmark/cmark.o 2021-05-18T14:22:19.8472131Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/node.c -o cmark/node.o 2021-05-18T14:22:20.1186134Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/iterator.c -o cmark/iterator.o 2021-05-18T14:22:20.2062116Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/blocks.c -o cmark/blocks.o 2021-05-18T14:22:20.6336748Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/inlines.c -o cmark/inlines.o 2021-05-18T14:22:21.3307766Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/scanners.c -o cmark/scanners.o 2021-05-18T14:22:23.0018873Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/utf8.c -o cmark/utf8.o 2021-05-18T14:22:26.1114920Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/buffer.c -o cmark/buffer.o 2021-05-18T14:22:26.2334754Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/references.c -o cmark/references.o 2021-05-18T14:22:26.2799097Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/render.c -o cmark/render.o 2021-05-18T14:22:26.3784420Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/man.c -o cmark/man.o 2021-05-18T14:22:26.4629401Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/xml.c -o cmark/xml.o 2021-05-18T14:22:26.5443931Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/html.c -o cmark/html.o 2021-05-18T14:22:26.7273141Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/commonmark.c -o cmark/commonmark.o 2021-05-18T14:22:26.9168207Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/latex.c -o cmark/latex.o 2021-05-18T14:22:27.0387653Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_href_e.c -o cmark/houdini_href_e.o 2021-05-18T14:22:27.0813341Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_html_e.c -o cmark/houdini_html_e.o 2021-05-18T14:22:27.1241431Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_html_u.c -o cmark/houdini_html_u.o 2021-05-18T14:22:27.2261922Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/cmark_ctype.c -o cmark/cmark_ctype.o 2021-05-18T14:22:27.2553875Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/arena.c -o cmark/arena.o 2021-05-18T14:22:27.3133470Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/linked_list.c -o cmark/linked_list.o 2021-05-18T14:22:27.3550176Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/plugin.c -o cmark/plugin.o 2021-05-18T14:22:27.3927489Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/registry.c -o cmark/registry.o 2021-05-18T14:22:27.4418032Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/syntax_extension.c -o cmark/syntax_extension.o 2021-05-18T14:22:27.5068290Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/plaintext.c -o cmark/plaintext.o 2021-05-18T14:22:27.6004139Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/footnotes.c -o cmark/footnotes.o 2021-05-18T14:22:27.6444554Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/map.c -o cmark/map.o 2021-05-18T14:22:27.7165245Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/autolink.c -o extensions/autolink.o 2021-05-18T14:22:27.8806131Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/core-extensions.c -o extensions/core-extensions.o 2021-05-18T14:22:27.9113909Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/ext_scanners.c -o extensions/ext_scanners.o 2021-05-18T14:22:28.0452355Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/strikethrough.c -o extensions/strikethrough.o 2021-05-18T14:22:28.1232007Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/table.c -o extensions/table.o 2021-05-18T14:22:28.3852808Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/tagfilter.c -o extensions/tagfilter.o 2021-05-18T14:22:28.4370028Z ar rcs cmark/libstatcmark.a cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o 2021-05-18T14:22:28.4497920Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o commonmark.so extensions.o init.o wrapper.o -Lcmark -lstatcmark -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:22:28.4926681Z installing to /home/runner/work/_temp/Library/00LOCK-commonmark/00new/commonmark/libs 2021-05-18T14:22:28.4992598Z ** R 2021-05-18T14:22:28.5019092Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:22:28.7350318Z ** help 2021-05-18T14:22:28.7477041Z *** installing help indices 2021-05-18T14:22:28.7637246Z ** building package indices 2021-05-18T14:22:28.9552597Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:22:29.1383889Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:22:29.1567491Z ** testing if installed package can be loaded from final location 2021-05-18T14:22:29.3298411Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:22:29.3303428Z * DONE (commonmark) 2021-05-18T14:22:29.5734323Z * installing *source* package ‘brew’ ... 2021-05-18T14:22:29.5739393Z ** using staged installation 2021-05-18T14:22:29.5824078Z ** R 2021-05-18T14:22:29.5853981Z ** inst 2021-05-18T14:22:29.5881366Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:22:29.9280397Z ** help 2021-05-18T14:22:29.9407956Z *** installing help indices 2021-05-18T14:22:29.9574406Z ** building package indices 2021-05-18T14:22:30.1483450Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:22:30.3258293Z ** testing if installed package can be loaded from final location 2021-05-18T14:22:30.5013971Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:22:30.5022143Z * DONE (brew) 2021-05-18T14:22:30.7228271Z * installing *source* package ‘sessioninfo’ ... 2021-05-18T14:22:30.7241791Z ** package ‘sessioninfo’ successfully unpacked and MD5 sums checked 2021-05-18T14:22:30.7242884Z ** using staged installation 2021-05-18T14:22:30.7420117Z ** R 2021-05-18T14:22:30.7459769Z ** inst 2021-05-18T14:22:30.7466424Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:22:31.1795064Z ** help 2021-05-18T14:22:31.1951280Z *** installing help indices 2021-05-18T14:22:31.2128642Z ** building package indices 2021-05-18T14:22:31.4066347Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:22:31.6359021Z ** testing if installed package can be loaded from final location 2021-05-18T14:22:31.8661256Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:22:31.8668142Z * DONE (sessioninfo) 2021-05-18T14:22:32.0818091Z * installing *source* package ‘prettyunits’ ... 2021-05-18T14:22:32.0828071Z ** package ‘prettyunits’ successfully unpacked and MD5 sums checked 2021-05-18T14:22:32.0829151Z ** using staged installation 2021-05-18T14:22:32.0935969Z ** R 2021-05-18T14:22:32.0974990Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:22:32.4125260Z ** help 2021-05-18T14:22:32.4404846Z *** installing help indices 2021-05-18T14:22:32.4616094Z ** building package indices 2021-05-18T14:22:32.6585329Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:22:32.8363475Z ** testing if installed package can be loaded from final location 2021-05-18T14:22:33.0129229Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:22:33.0135288Z * DONE (prettyunits) 2021-05-18T14:22:33.5409372Z * installing *source* package ‘vctrs’ ... 2021-05-18T14:22:33.5560072Z ** package ‘vctrs’ successfully unpacked and MD5 sums checked 2021-05-18T14:22:33.5561084Z ** using staged installation 2021-05-18T14:22:33.5734212Z ** libs 2021-05-18T14:22:33.5803016Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c altrep-rle.c -o altrep-rle.o 2021-05-18T14:22:33.6915330Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c arg-counter.c -o arg-counter.o 2021-05-18T14:22:33.7737667Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c arg.c -o arg.o 2021-05-18T14:22:33.8571535Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c bind.c -o bind.o 2021-05-18T14:22:34.0920857Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c c-unchop.c -o c-unchop.o 2021-05-18T14:22:34.2049986Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c c.c -o c.o 2021-05-18T14:22:34.3394455Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c callables.c -o callables.o 2021-05-18T14:22:34.4019931Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast-bare.c -o cast-bare.o 2021-05-18T14:22:34.5056928Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast-dispatch.c -o cast-dispatch.o 2021-05-18T14:22:34.5788145Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast.c -o cast.o 2021-05-18T14:22:34.7096708Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c compare.c -o compare.o 2021-05-18T14:22:34.9040947Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c complete.c -o complete.o 2021-05-18T14:22:35.0203699Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c conditions.c -o conditions.o 2021-05-18T14:22:35.1048210Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dictionary.c -o dictionary.o 2021-05-18T14:22:35.3472558Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dim.c -o dim.o 2021-05-18T14:22:35.4065079Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c equal.c -o equal.o 2021-05-18T14:22:35.7795547Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fields.c -o fields.o 2021-05-18T14:22:35.8668050Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fill.c -o fill.o 2021-05-18T14:22:35.9856448Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c group.c -o group.o 2021-05-18T14:22:36.1011624Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c growable.c -o growable.o 2021-05-18T14:22:36.1575127Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hash.c -o hash.o 2021-05-18T14:22:36.3770838Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:22:36.4363565Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c names.c -o names.o 2021-05-18T14:22:36.7382195Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-groups.c -o order-groups.o 2021-05-18T14:22:36.8097382Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-radix.c -o order-radix.o 2021-05-18T14:22:37.4965972Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-sortedness.c -o order-sortedness.o 2021-05-18T14:22:37.6429516Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-transform.c -o order-transform.o 2021-05-18T14:22:37.7130943Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-truelength.c -o order-truelength.o 2021-05-18T14:22:37.7852677Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c poly-op.c -o poly-op.o 2021-05-18T14:22:37.9385617Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c proxy-restore.c -o proxy-restore.o 2021-05-18T14:22:38.0440009Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c proxy.c -o proxy.o 2021-05-18T14:22:38.1669624Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ptype2-dispatch.c -o ptype2-dispatch.o 2021-05-18T14:22:38.2734980Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rep.c -o rep.o 2021-05-18T14:22:38.4016670Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c runs.c -o runs.o 2021-05-18T14:22:38.6371766Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c shape.c -o shape.o 2021-05-18T14:22:38.7321315Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size-common.c -o size-common.o 2021-05-18T14:22:38.8117322Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size.c -o size.o 2021-05-18T14:22:38.9189917Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-array.c -o slice-array.o 2021-05-18T14:22:39.3590215Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-assign-array.c -o slice-assign-array.o 2021-05-18T14:22:39.6979289Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-assign.c -o slice-assign.o 2021-05-18T14:22:39.9311819Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-chop.c -o slice-chop.o 2021-05-18T14:22:40.0924301Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice.c -o slice.o 2021-05-18T14:22:40.3583517Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c split.c -o split.o 2021-05-18T14:22:40.4129370Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c subscript-loc.c -o subscript-loc.o 2021-05-18T14:22:40.6040258Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c subscript.c -o subscript.o 2021-05-18T14:22:40.7470633Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c translate.c -o translate.o 2021-05-18T14:22:40.8495698Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-data-frame.c -o type-data-frame.o 2021-05-18T14:22:41.1907040Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-date-time.c -o type-date-time.o 2021-05-18T14:22:41.3408418Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-factor.c -o type-factor.o 2021-05-18T14:22:41.4687730Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-info.c -o type-info.o 2021-05-18T14:22:41.5696228Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-tibble.c -o type-tibble.o 2021-05-18T14:22:41.6420100Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type.c -o type.o 2021-05-18T14:22:41.7619771Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type2.c -o type2.o 2021-05-18T14:22:41.8889405Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typeof2-s3.c -o typeof2-s3.o 2021-05-18T14:22:42.0086665Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typeof2.c -o typeof2.o 2021-05-18T14:22:42.1072607Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c unspecified.c -o unspecified.o 2021-05-18T14:22:42.1810289Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils-dispatch.c -o utils-dispatch.o 2021-05-18T14:22:42.2510307Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils-rlang.c -o utils-rlang.o 2021-05-18T14:22:42.3057468Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-18T14:22:42.9195788Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-18T14:22:42.9599366Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o vctrs.so altrep-rle.o arg-counter.o arg.o bind.o c-unchop.o c.o callables.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o equal.o fields.o fill.o group.o growable.o hash.o init.o names.o order-groups.o order-radix.o order-sortedness.o order-transform.o order-truelength.o poly-op.o proxy-restore.o proxy.o ptype2-dispatch.o rep.o runs.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-tibble.o type.o type2.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils-rlang.o utils.o version.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:22:43.0241572Z installing to /home/runner/work/_temp/Library/00LOCK-vctrs/00new/vctrs/libs 2021-05-18T14:22:43.0253477Z ** R 2021-05-18T14:22:43.0593885Z ** inst 2021-05-18T14:22:43.0615779Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:22:45.8355821Z ** help 2021-05-18T14:22:46.0919794Z *** installing help indices 2021-05-18T14:22:46.2912981Z *** copying figures 2021-05-18T14:22:46.2921882Z ** building package indices 2021-05-18T14:22:46.6163748Z ** installing vignettes 2021-05-18T14:22:46.6351554Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:22:46.8728403Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:22:46.8937447Z ** testing if installed package can be loaded from final location 2021-05-18T14:22:47.1840321Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:22:47.1874566Z * DONE (vctrs) 2021-05-18T14:22:47.4794617Z * installing *source* package ‘processx’ ... 2021-05-18T14:22:47.4830503Z ** package ‘processx’ successfully unpacked and MD5 sums checked 2021-05-18T14:22:47.4831620Z ** using staged installation 2021-05-18T14:22:47.5005805Z ** libs 2021-05-18T14:22:47.5059753Z gcc -g -O2 -L/usr/local/lib -Wall tools/px.c -o tools/px 2021-05-18T14:22:47.6402060Z gcc -g -O2 -L/usr/local/lib supervisor/supervisor.c \ 2021-05-18T14:22:47.6403365Z supervisor/utils.c -o supervisor/supervisor 2021-05-18T14:22:47.8139478Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-18T14:22:47.8986217Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c client.c -o client.o 2021-05-18T14:22:47.9896200Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c errors.c -o errors.o 2021-05-18T14:22:48.0487219Z gcc -shared -L"/opt/R/devel/lib/R/lib" -L/usr/local/lib -o client.so base64.o client.o errors.o \ 2021-05-18T14:22:48.0488595Z -L"/opt/R/devel/lib/R/lib" -lR 2021-05-18T14:22:48.0724280Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:22:48.1509708Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c poll.c -o poll.o 2021-05-18T14:22:48.2503145Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c processx-connection.c -o processx-connection.o 2021-05-18T14:22:48.5809538Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c processx-vector.c -o processx-vector.o 2021-05-18T14:22:48.6682483Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c create-time.c -o create-time.o 2021-05-18T14:22:48.7792151Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/childlist.c -o unix/childlist.o 2021-05-18T14:22:48.8738610Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/connection.c -o unix/connection.o 2021-05-18T14:22:48.9490254Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/processx.c -o unix/processx.o 2021-05-18T14:22:49.2590160Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/sigchld.c -o unix/sigchld.o 2021-05-18T14:22:49.3555131Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/utils.c -o unix/utils.o 2021-05-18T14:22:49.4590866Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/named_pipe.c -o unix/named_pipe.o 2021-05-18T14:22:49.5151194Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cleancall.c -o cleancall.o 2021-05-18T14:22:49.5869913Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o processx.so init.o poll.o errors.o processx-connection.o processx-vector.o create-time.o base64.o unix/childlist.o unix/connection.o unix/processx.o unix/sigchld.o unix/utils.o unix/named_pipe.o cleancall.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:22:49.6161759Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-processx/00new/processx 2021-05-18T14:22:49.6192855Z ** R 2021-05-18T14:22:49.6327478Z ** inst 2021-05-18T14:22:49.6335541Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:22:51.2750065Z ** help 2021-05-18T14:22:51.3497621Z *** installing help indices 2021-05-18T14:22:51.3935456Z ** building package indices 2021-05-18T14:22:51.6222743Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:22:51.8194199Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:22:51.8459668Z ** testing if installed package can be loaded from final location 2021-05-18T14:22:52.0676145Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:22:52.0693542Z * DONE (processx) 2021-05-18T14:22:52.3263364Z * installing *source* package ‘markdown’ ... 2021-05-18T14:22:52.3289060Z ** package ‘markdown’ successfully unpacked and MD5 sums checked 2021-05-18T14:22:52.3290371Z ** using staged installation 2021-05-18T14:22:52.3445511Z ** libs 2021-05-18T14:22:52.3499041Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rbase64.c -o Rbase64.o 2021-05-18T14:22:52.4148618Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rinit.c -o Rinit.o 2021-05-18T14:22:52.4660139Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rmarkdown.c -o Rmarkdown.o 2021-05-18T14:22:52.6325470Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c autolink.c -o autolink.o 2021-05-18T14:22:52.7373955Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c buffer.c -o buffer.o 2021-05-18T14:22:52.8112726Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_href_e.c -o houdini_href_e.o 2021-05-18T14:22:52.8519149Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_html_e.c -o houdini_html_e.o 2021-05-18T14:22:52.8928624Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html.c -o html.o 2021-05-18T14:22:53.1028442Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html_smartypants.c -o html_smartypants.o 2021-05-18T14:22:53.2380614Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c markdown.c -o markdown.o 2021-05-18T14:22:54.2842254Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stack.c -o stack.o 2021-05-18T14:22:54.3316824Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o markdown.so Rbase64.o Rinit.o Rmarkdown.o autolink.o buffer.o houdini_href_e.o houdini_html_e.o html.o html_smartypants.o markdown.o stack.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:22:54.3602289Z installing to /home/runner/work/_temp/Library/00LOCK-markdown/00new/markdown/libs 2021-05-18T14:22:54.3603732Z ** R 2021-05-18T14:22:54.3655126Z ** inst 2021-05-18T14:22:54.3674060Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:22:54.8002247Z ** help 2021-05-18T14:22:54.8368244Z *** installing help indices 2021-05-18T14:22:54.8635630Z ** building package indices 2021-05-18T14:22:55.0695167Z ** installing vignettes 2021-05-18T14:22:55.0750435Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:22:55.2580601Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:22:55.2764418Z ** testing if installed package can be loaded from final location 2021-05-18T14:22:55.4596370Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:22:55.4606860Z * DONE (markdown) 2021-05-18T14:22:55.6793760Z * installing *source* package ‘highr’ ... 2021-05-18T14:22:55.6804856Z ** package ‘highr’ successfully unpacked and MD5 sums checked 2021-05-18T14:22:55.6805912Z ** using staged installation 2021-05-18T14:22:55.6960220Z ** R 2021-05-18T14:22:55.6995597Z ** inst 2021-05-18T14:22:55.7007240Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:22:56.0520501Z ** help 2021-05-18T14:22:56.0629703Z *** installing help indices 2021-05-18T14:22:56.0787420Z ** building package indices 2021-05-18T14:22:56.2706687Z ** installing vignettes 2021-05-18T14:22:56.2756916Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:22:56.4553938Z ** testing if installed package can be loaded from final location 2021-05-18T14:22:56.6350855Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:22:56.6357210Z * DONE (highr) 2021-05-18T14:22:56.9146498Z * installing *source* package ‘stringr’ ... 2021-05-18T14:22:56.9183374Z ** package ‘stringr’ successfully unpacked and MD5 sums checked 2021-05-18T14:22:56.9186545Z ** using staged installation 2021-05-18T14:22:56.9362954Z ** R 2021-05-18T14:22:56.9441745Z ** data 2021-05-18T14:22:56.9448410Z *** moving datasets to lazyload DB 2021-05-18T14:22:56.9624869Z ** inst 2021-05-18T14:22:56.9642089Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:22:57.4706963Z ** help 2021-05-18T14:22:57.5455675Z *** installing help indices 2021-05-18T14:22:57.6005590Z *** copying figures 2021-05-18T14:22:57.6007212Z ** building package indices 2021-05-18T14:22:57.8371485Z ** installing vignettes 2021-05-18T14:22:57.8428571Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:22:58.0331800Z ** testing if installed package can be loaded from final location 2021-05-18T14:22:58.2289480Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:22:58.2299332Z * DONE (stringr) 2021-05-18T14:22:58.4481828Z * installing *source* package ‘rversions’ ... 2021-05-18T14:22:58.4493028Z ** package ‘rversions’ successfully unpacked and MD5 sums checked 2021-05-18T14:22:58.4494104Z ** using staged installation 2021-05-18T14:22:58.4634354Z ** R 2021-05-18T14:22:58.4670357Z ** inst 2021-05-18T14:22:58.4677751Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:22:58.7896299Z ** help 2021-05-18T14:22:58.8081773Z *** installing help indices 2021-05-18T14:22:58.8285824Z *** copying figures 2021-05-18T14:22:58.8288958Z ** building package indices 2021-05-18T14:22:59.0267057Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:22:59.2303267Z ** testing if installed package can be loaded from final location 2021-05-18T14:22:59.4333447Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:22:59.4339167Z * DONE (rversions) 2021-05-18T14:22:59.8444513Z * installing *source* package ‘pillar’ ... 2021-05-18T14:22:59.8545899Z ** package ‘pillar’ successfully unpacked and MD5 sums checked 2021-05-18T14:22:59.8547722Z ** using staged installation 2021-05-18T14:22:59.8729600Z ** R 2021-05-18T14:22:59.8905052Z ** inst 2021-05-18T14:22:59.8938711Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:23:01.6840310Z ** help 2021-05-18T14:23:01.7638261Z *** installing help indices 2021-05-18T14:23:01.8252478Z *** copying figures 2021-05-18T14:23:01.8256440Z ** building package indices 2021-05-18T14:23:02.0640012Z ** installing vignettes 2021-05-18T14:23:02.0727650Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:23:02.3625834Z ** testing if installed package can be loaded from final location 2021-05-18T14:23:02.6850353Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:23:02.6874350Z * DONE (pillar) 2021-05-18T14:23:02.9545487Z * installing *source* package ‘callr’ ... 2021-05-18T14:23:02.9573718Z ** package ‘callr’ successfully unpacked and MD5 sums checked 2021-05-18T14:23:02.9574897Z ** using staged installation 2021-05-18T14:23:02.9714686Z ** R 2021-05-18T14:23:02.9848133Z ** inst 2021-05-18T14:23:02.9855541Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:23:06.3440338Z ** help 2021-05-18T14:23:06.4612708Z *** installing help indices 2021-05-18T14:23:06.5334818Z ** building package indices 2021-05-18T14:23:06.7894373Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:23:06.9925395Z ** testing if installed package can be loaded from final location 2021-05-18T14:23:07.2562371Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:23:07.2593195Z * DONE (callr) 2021-05-18T14:23:07.7224422Z * installing *source* package ‘knitr’ ... 2021-05-18T14:23:07.7335313Z ** package ‘knitr’ successfully unpacked and MD5 sums checked 2021-05-18T14:23:07.7336750Z ** using staged installation 2021-05-18T14:23:07.7684083Z ** R 2021-05-18T14:23:07.8056368Z ** demo 2021-05-18T14:23:07.8062993Z ** inst 2021-05-18T14:23:07.8163404Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:23:12.2481692Z ** help 2021-05-18T14:23:12.4379468Z *** installing help indices 2021-05-18T14:23:12.5647011Z ** building package indices 2021-05-18T14:23:12.8640637Z ** installing vignettes 2021-05-18T14:23:12.8715494Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:23:13.0704890Z ** testing if installed package can be loaded from final location 2021-05-18T14:23:13.3680985Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:23:13.3681777Z * DONE (knitr) 2021-05-18T14:23:13.5811997Z * installing *source* package ‘xopen’ ... 2021-05-18T14:23:13.5821771Z ** package ‘xopen’ successfully unpacked and MD5 sums checked 2021-05-18T14:23:13.5824218Z ** using staged installation 2021-05-18T14:23:13.5970662Z ** R 2021-05-18T14:23:13.5995484Z ** inst 2021-05-18T14:23:13.6003965Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:23:13.8440428Z ** help 2021-05-18T14:23:13.8537967Z *** installing help indices 2021-05-18T14:23:13.8765810Z ** building package indices 2021-05-18T14:23:14.0657203Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:23:14.2451989Z ** testing if installed package can be loaded from final location 2021-05-18T14:23:14.4223802Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:23:14.4229172Z * DONE (xopen) 2021-05-18T14:23:14.8325231Z * installing *source* package ‘tibble’ ... 2021-05-18T14:23:14.8423308Z ** package ‘tibble’ successfully unpacked and MD5 sums checked 2021-05-18T14:23:14.8424483Z ** using staged installation 2021-05-18T14:23:14.8631467Z ** libs 2021-05-18T14:23:14.8678841Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c attributes.c -o attributes.o 2021-05-18T14:23:14.9134303Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-05-18T14:23:14.9770631Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:23:15.0150594Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c matrixToDataFrame.c -o matrixToDataFrame.o 2021-05-18T14:23:15.1102994Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:23:15.1330395Z installing to /home/runner/work/_temp/Library/00LOCK-tibble/00new/tibble/libs 2021-05-18T14:23:15.1345225Z ** R 2021-05-18T14:23:15.1504093Z ** inst 2021-05-18T14:23:15.1535471Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:23:17.0598844Z ** help 2021-05-18T14:23:17.1328555Z *** installing help indices 2021-05-18T14:23:17.1826396Z *** copying figures 2021-05-18T14:23:17.1831471Z ** building package indices 2021-05-18T14:23:17.4160491Z ** installing vignettes 2021-05-18T14:23:17.4200599Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:23:17.7769899Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:23:17.7948219Z ** testing if installed package can be loaded from final location 2021-05-18T14:23:18.1681084Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:23:18.1689977Z * DONE (tibble) 2021-05-18T14:23:18.4215067Z * installing *source* package ‘pkgbuild’ ... 2021-05-18T14:23:18.4235414Z ** package ‘pkgbuild’ successfully unpacked and MD5 sums checked 2021-05-18T14:23:18.4236477Z ** using staged installation 2021-05-18T14:23:18.4383711Z ** R 2021-05-18T14:23:18.4463302Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:23:19.6604451Z ** help 2021-05-18T14:23:19.6958445Z *** installing help indices 2021-05-18T14:23:19.7308589Z ** building package indices 2021-05-18T14:23:19.9409757Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:23:20.2007695Z ** testing if installed package can be loaded from final location 2021-05-18T14:23:20.4742212Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:23:20.4756213Z * DONE (pkgbuild) 2021-05-18T14:23:20.8588162Z * installing *source* package ‘roxygen2’ ... 2021-05-18T14:23:20.8663431Z ** package ‘roxygen2’ successfully unpacked and MD5 sums checked 2021-05-18T14:23:20.8666628Z ** using staged installation 2021-05-18T14:23:20.8857586Z ** libs 2021-05-18T14:23:20.8913689Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-18T14:23:25.3641090Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c escapeExamples.cpp -o escapeExamples.o 2021-05-18T14:23:28.2896657Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c isComplete.cpp -o isComplete.o 2021-05-18T14:23:31.2245117Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c leadingSpaces.cpp -o leadingSpaces.o 2021-05-18T14:23:34.1826824Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c parser2.cpp -o parser2.o 2021-05-18T14:23:38.8839172Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c wrapUsage.cpp -o wrapUsage.o 2021-05-18T14:23:41.9883841Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o roxygen2.so RcppExports.o escapeExamples.o isComplete.o leadingSpaces.o parser2.o wrapUsage.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:23:42.0881772Z installing to /home/runner/work/_temp/Library/00LOCK-roxygen2/00new/roxygen2/libs 2021-05-18T14:23:42.0921095Z ** R 2021-05-18T14:23:42.1215668Z ** inst 2021-05-18T14:23:42.1233487Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:23:45.9619915Z ** help 2021-05-18T14:23:46.0321224Z *** installing help indices 2021-05-18T14:23:46.0842052Z *** copying figures 2021-05-18T14:23:46.0845322Z ** building package indices 2021-05-18T14:23:46.3160477Z ** installing vignettes 2021-05-18T14:23:46.3249836Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:23:46.6797548Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:23:46.6994580Z ** testing if installed package can be loaded from final location 2021-05-18T14:23:47.1223356Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:23:47.1262741Z * DONE (roxygen2) 2021-05-18T14:23:47.3495763Z * installing *source* package ‘rematch2’ ... 2021-05-18T14:23:47.3506582Z ** package ‘rematch2’ successfully unpacked and MD5 sums checked 2021-05-18T14:23:47.3507645Z ** using staged installation 2021-05-18T14:23:47.3643220Z ** R 2021-05-18T14:23:47.3683934Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:23:47.8600347Z ** help 2021-05-18T14:23:47.8887481Z *** installing help indices 2021-05-18T14:23:47.9101630Z ** building package indices 2021-05-18T14:23:48.1045799Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:23:48.4595025Z ** testing if installed package can be loaded from final location 2021-05-18T14:23:48.8111720Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:23:48.8120127Z * DONE (rematch2) 2021-05-18T14:23:49.0692745Z * installing *source* package ‘rcmdcheck’ ... 2021-05-18T14:23:49.0716178Z ** package ‘rcmdcheck’ successfully unpacked and MD5 sums checked 2021-05-18T14:23:49.0717403Z ** using staged installation 2021-05-18T14:23:49.0849929Z ** R 2021-05-18T14:23:49.0924325Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:23:50.2936282Z ** help 2021-05-18T14:23:50.3289575Z *** installing help indices 2021-05-18T14:23:50.3576728Z ** building package indices 2021-05-18T14:23:50.5649053Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:23:50.8478217Z ** testing if installed package can be loaded from final location 2021-05-18T14:23:51.1436105Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:23:51.1449774Z * DONE (rcmdcheck) 2021-05-18T14:23:51.3870796Z * installing *source* package ‘waldo’ ... 2021-05-18T14:23:51.3889720Z ** package ‘waldo’ successfully unpacked and MD5 sums checked 2021-05-18T14:23:51.3891556Z ** using staged installation 2021-05-18T14:23:51.4033419Z ** R 2021-05-18T14:23:51.4092187Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:23:52.1085784Z ** help 2021-05-18T14:23:52.1225325Z *** installing help indices 2021-05-18T14:23:52.1411406Z *** copying figures 2021-05-18T14:23:52.1412387Z ** building package indices 2021-05-18T14:23:52.3385715Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:23:52.5791319Z ** testing if installed package can be loaded from final location 2021-05-18T14:23:52.8213276Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:23:52.8222706Z * DONE (waldo) 2021-05-18T14:23:53.3132716Z * installing *source* package ‘testthat’ ... 2021-05-18T14:23:53.3253501Z ** package ‘testthat’ successfully unpacked and MD5 sums checked 2021-05-18T14:23:53.3255011Z ** using staged installation 2021-05-18T14:23:53.3467410Z ** libs 2021-05-18T14:23:53.3517191Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:23:53.3967512Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o 2021-05-18T14:23:53.4530976Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-catch.cpp -o test-catch.o 2021-05-18T14:23:54.2041436Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-example.cpp -o test-example.o 2021-05-18T14:23:54.7867657Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-runner.cpp -o test-runner.o 2021-05-18T14:24:11.1253210Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o testthat.so init.o reassign.o test-catch.o test-example.o test-runner.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:24:11.2914438Z installing to /home/runner/work/_temp/Library/00LOCK-testthat/00new/testthat/libs 2021-05-18T14:24:11.3020849Z ** R 2021-05-18T14:24:11.3382857Z ** inst 2021-05-18T14:24:11.3416523Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:24:21.2059071Z ** help 2021-05-18T14:24:21.4192436Z *** installing help indices 2021-05-18T14:24:21.6013659Z *** copying figures 2021-05-18T14:24:21.6017872Z ** building package indices 2021-05-18T14:24:21.9186965Z ** installing vignettes 2021-05-18T14:24:21.9306190Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:24:22.1418576Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:24:22.1650598Z ** testing if installed package can be loaded from final location 2021-05-18T14:24:22.5991009Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:24:22.6074889Z * DONE (testthat) 2021-05-18T14:24:22.9624006Z * installing *source* package ‘devtools’ ... 2021-05-18T14:24:22.9680875Z ** package ‘devtools’ successfully unpacked and MD5 sums checked 2021-05-18T14:24:22.9681721Z ** using staged installation 2021-05-18T14:24:22.9960318Z ** R 2021-05-18T14:24:23.0089740Z ** inst 2021-05-18T14:24:23.0101238Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:24:24.7930904Z ** help 2021-05-18T14:24:24.8994856Z *** installing help indices 2021-05-18T14:24:24.9731929Z *** copying figures 2021-05-18T14:24:24.9733353Z ** building package indices 2021-05-18T14:24:25.2243563Z ** installing vignettes 2021-05-18T14:24:25.2311917Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:24:25.9055833Z ** testing if installed package can be loaded from final location 2021-05-18T14:24:26.5943685Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:24:26.5965475Z * DONE (devtools) 2021-05-18T14:24:26.6080892Z 2021-05-18T14:24:26.6082083Z The downloaded source packages are in 2021-05-18T14:24:26.6083624Z ‘/tmp/RtmpjhTgLB/downloaded_packages’ 2021-05-18T14:24:26.7015299Z Downloading GitHub repo muschellij2/desc@HEAD 2021-05-18T14:24:27.5787209Z 2021-05-18T14:24:27.8665661Z 2021-05-18T14:24:27.8671766Z checking for file ‘/tmp/RtmpjhTgLB/remotes73e512fa2399/muschellij2-desc-7be86f2/DESCRIPTION’ ... 2021-05-18T14:24:27.8735292Z 2021-05-18T14:24:27.8738176Z ✔ checking for file ‘/tmp/RtmpjhTgLB/remotes73e512fa2399/muschellij2-desc-7be86f2/DESCRIPTION’ 2021-05-18T14:24:27.8808784Z 2021-05-18T14:24:27.8832958Z 2021-05-18T14:24:27.8834826Z ─ preparing ‘desc’: 2021-05-18T14:24:27.8843947Z 2021-05-18T14:24:27.8845866Z 2021-05-18T14:24:27.8938917Z checking DESCRIPTION meta-information ... 2021-05-18T14:24:27.8964279Z 2021-05-18T14:24:27.8966217Z ✔ checking DESCRIPTION meta-information 2021-05-18T14:24:27.9608165Z 2021-05-18T14:24:27.9637845Z 2021-05-18T14:24:27.9640660Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-18T14:24:27.9650722Z 2021-05-18T14:24:27.9675357Z 2021-05-18T14:24:27.9677224Z ─ checking for empty or unneeded directories 2021-05-18T14:24:27.9680542Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-18T14:24:27.9708715Z 2021-05-18T14:24:27.9730999Z 2021-05-18T14:24:27.9733152Z ─ building ‘desc_1.2.0.9000.tar.gz’ 2021-05-18T14:24:28.0766491Z 2021-05-18T14:24:28.0769843Z 2021-05-18T14:24:28.0771212Z 2021-05-18T14:24:28.0870699Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:24:28.0871881Z (as ‘lib’ is unspecified) 2021-05-18T14:24:28.3858099Z * installing *source* package ‘desc’ ... 2021-05-18T14:24:28.3902707Z ** using staged installation 2021-05-18T14:24:28.4054530Z ** R 2021-05-18T14:24:28.4184718Z ** inst 2021-05-18T14:24:28.4200484Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:24:29.9751053Z ** help 2021-05-18T14:24:30.1036402Z *** installing help indices 2021-05-18T14:24:30.1924237Z ** building package indices 2021-05-18T14:24:30.4645889Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:24:30.6521286Z ** testing if installed package can be loaded from final location 2021-05-18T14:24:30.8646666Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:24:30.8665487Z * DONE (desc) 2021-05-18T14:24:31.0625483Z 2021-05-18T14:24:31.0626524Z 2021-05-18T14:24:31.0642472Z checking for file ‘/tmp/RtmpjhTgLB/remotes73e55d6cb684/muschellij2-ghtravis-0b26809/DESCRIPTION’ ... 2021-05-18T14:24:31.0670300Z 2021-05-18T14:24:31.0672085Z ✔ checking for file ‘/tmp/RtmpjhTgLB/remotes73e55d6cb684/muschellij2-ghtravis-0b26809/DESCRIPTION’ 2021-05-18T14:24:31.0760117Z 2021-05-18T14:24:31.0763587Z 2021-05-18T14:24:31.0764651Z ─ preparing ‘ghtravis’: 2021-05-18T14:24:31.0770401Z 2021-05-18T14:24:31.0771001Z 2021-05-18T14:24:31.0859209Z checking DESCRIPTION meta-information ... 2021-05-18T14:24:31.0881568Z 2021-05-18T14:24:31.0882792Z ✔ checking DESCRIPTION meta-information 2021-05-18T14:24:31.1250660Z 2021-05-18T14:24:31.1275262Z 2021-05-18T14:24:31.1276850Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-18T14:24:31.1283075Z 2021-05-18T14:24:31.1306023Z 2021-05-18T14:24:31.1307324Z ─ checking for empty or unneeded directories 2021-05-18T14:24:31.1308406Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-18T14:24:31.1413222Z 2021-05-18T14:24:31.1434680Z 2021-05-18T14:24:31.1439311Z ─ building ‘ghtravis_0.15.1.tar.gz’ 2021-05-18T14:24:31.1658370Z 2021-05-18T14:24:31.1659144Z 2021-05-18T14:24:31.1659713Z 2021-05-18T14:24:31.2163002Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:24:31.2164559Z (as ‘lib’ is unspecified) 2021-05-18T14:24:31.4512259Z * installing *source* package ‘ghtravis’ ... 2021-05-18T14:24:31.4513743Z ** using staged installation 2021-05-18T14:24:31.4660784Z ** R 2021-05-18T14:24:31.4744423Z ** inst 2021-05-18T14:24:31.4753033Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:24:32.7687302Z ** help 2021-05-18T14:24:32.8254893Z *** installing help indices 2021-05-18T14:24:32.8680140Z ** building package indices 2021-05-18T14:24:33.0989742Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:24:33.7886745Z ** testing if installed package can be loaded from final location 2021-05-18T14:24:34.4822294Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:24:34.4831623Z * DONE (ghtravis) 2021-05-18T14:24:34.4922559Z Using github PAT from envvar GITHUB_PAT 2021-05-18T14:24:34.6701114Z Downloading GitHub repo muschellij2/aghast@HEAD 2021-05-18T14:24:35.7242050Z 2021-05-18T14:24:35.7243783Z Installing 5 packages: tidyselect, generics, cpp11, dplyr, tidyr 2021-05-18T14:24:35.7245180Z tidyselect (NA -> 1.1.1) [CRAN] 2021-05-18T14:24:35.7246224Z generics (NA -> 0.1.0) [CRAN] 2021-05-18T14:24:35.7247167Z cpp11 (NA -> 0.2.7) [CRAN] 2021-05-18T14:24:35.7248042Z dplyr (NA -> 1.0.6) [CRAN] 2021-05-18T14:24:35.7248902Z tidyr (NA -> 1.1.3) [CRAN] 2021-05-18T14:24:35.7253485Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:24:35.7254559Z (as ‘lib’ is unspecified) 2021-05-18T14:24:50.4872932Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyselect_1.1.1.tar.gz' 2021-05-18T14:24:50.8718818Z Content type 'binary/octet-stream' length 92124 bytes (89 KB) 2021-05-18T14:24:50.8791788Z ================================================== 2021-05-18T14:24:50.8792549Z downloaded 89 KB 2021-05-18T14:24:50.8793066Z 2021-05-18T14:24:50.8835997Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/generics_0.1.0.tar.gz' 2021-05-18T14:24:51.1767265Z Content type 'binary/octet-stream' length 118869 bytes (116 KB) 2021-05-18T14:24:51.1874974Z ================================================== 2021-05-18T14:24:51.1876020Z downloaded 116 KB 2021-05-18T14:24:51.1876551Z 2021-05-18T14:24:51.1913212Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cpp11_0.2.7.tar.gz' 2021-05-18T14:24:51.4670408Z Content type 'binary/octet-stream' length 200157 bytes (195 KB) 2021-05-18T14:24:51.5859046Z ================================================== 2021-05-18T14:24:51.5860226Z downloaded 195 KB 2021-05-18T14:24:51.5860751Z 2021-05-18T14:24:51.5900528Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/dplyr_1.0.6.tar.gz' 2021-05-18T14:24:51.8757480Z Content type 'binary/octet-stream' length 954544 bytes (932 KB) 2021-05-18T14:24:51.9027478Z ================================================== 2021-05-18T14:24:51.9028034Z downloaded 932 KB 2021-05-18T14:24:51.9028292Z 2021-05-18T14:24:51.9069145Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyr_1.1.3.tar.gz' 2021-05-18T14:24:52.0990091Z Content type 'binary/octet-stream' length 706784 bytes (690 KB) 2021-05-18T14:24:52.1227976Z ================================================== 2021-05-18T14:24:52.1228585Z downloaded 690 KB 2021-05-18T14:24:52.1228929Z 2021-05-18T14:24:52.3922561Z * installing *source* package ‘tidyselect’ ... 2021-05-18T14:24:52.3955587Z ** package ‘tidyselect’ successfully unpacked and MD5 sums checked 2021-05-18T14:24:52.3958887Z ** using staged installation 2021-05-18T14:24:52.4120318Z ** R 2021-05-18T14:24:52.4209039Z ** inst 2021-05-18T14:24:52.4223968Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:24:53.3952218Z ** help 2021-05-18T14:24:53.4497975Z *** installing help indices 2021-05-18T14:24:53.4907623Z ** building package indices 2021-05-18T14:24:53.7040501Z ** installing vignettes 2021-05-18T14:24:53.7081605Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:24:53.9630065Z ** testing if installed package can be loaded from final location 2021-05-18T14:24:54.2224844Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:24:54.2236010Z * DONE (tidyselect) 2021-05-18T14:24:54.4966796Z * installing *source* package ‘generics’ ... 2021-05-18T14:24:54.4997326Z ** package ‘generics’ successfully unpacked and MD5 sums checked 2021-05-18T14:24:54.4998565Z ** using staged installation 2021-05-18T14:24:54.5128047Z ** R 2021-05-18T14:24:54.5180437Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:24:54.8200352Z ** help 2021-05-18T14:24:54.9319881Z *** installing help indices 2021-05-18T14:24:54.9754534Z ** building package indices 2021-05-18T14:24:55.2056512Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:24:55.3835908Z ** testing if installed package can be loaded from final location 2021-05-18T14:24:55.5610674Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:24:55.5616322Z * DONE (generics) 2021-05-18T14:24:55.8280480Z * installing *source* package ‘cpp11’ ... 2021-05-18T14:24:55.8314777Z ** package ‘cpp11’ successfully unpacked and MD5 sums checked 2021-05-18T14:24:55.8315811Z ** using staged installation 2021-05-18T14:24:55.8468786Z ** R 2021-05-18T14:24:55.8511293Z ** inst 2021-05-18T14:24:55.8539966Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:24:56.2400331Z ** help 2021-05-18T14:24:56.2586134Z *** installing help indices 2021-05-18T14:24:56.2767046Z ** building package indices 2021-05-18T14:24:56.4702488Z ** installing vignettes 2021-05-18T14:24:56.4703327Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:24:56.6458778Z ** testing if installed package can be loaded from final location 2021-05-18T14:24:56.8218235Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:24:56.8226909Z * DONE (cpp11) 2021-05-18T14:24:57.3121851Z * installing *source* package ‘dplyr’ ... 2021-05-18T14:24:57.3246491Z ** package ‘dplyr’ successfully unpacked and MD5 sums checked 2021-05-18T14:24:57.3247915Z ** using staged installation 2021-05-18T14:24:57.3460871Z ** libs 2021-05-18T14:24:57.3509826Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c chop.cpp -o chop.o 2021-05-18T14:24:57.4845924Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c filter.cpp -o filter.o 2021-05-18T14:24:57.6458587Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c funs.cpp -o funs.o 2021-05-18T14:24:57.7687872Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c group_by.cpp -o group_by.o 2021-05-18T14:24:58.2899523Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c group_data.cpp -o group_data.o 2021-05-18T14:24:58.3920682Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c imports.cpp -o imports.o 2021-05-18T14:24:58.4990569Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.cpp -o init.o 2021-05-18T14:24:58.6070747Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mask.cpp -o mask.o 2021-05-18T14:24:58.7327205Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mutate.cpp -o mutate.o 2021-05-18T14:24:58.8527243Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c slice.cpp -o slice.o 2021-05-18T14:24:58.9442613Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c summarise.cpp -o summarise.o 2021-05-18T14:24:59.1034698Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o dplyr.so chop.o filter.o funs.o group_by.o group_data.o imports.o init.o mask.o mutate.o slice.o summarise.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:24:59.1682276Z installing to /home/runner/work/_temp/Library/00LOCK-dplyr/00new/dplyr/libs 2021-05-18T14:24:59.1683680Z ** R 2021-05-18T14:24:59.2114872Z ** data 2021-05-18T14:24:59.2120199Z *** moving datasets to lazyload DB 2021-05-18T14:24:59.3047659Z ** inst 2021-05-18T14:24:59.3075583Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:25:03.7440386Z ** help 2021-05-18T14:25:04.2398286Z *** installing help indices 2021-05-18T14:25:04.4795052Z *** copying figures 2021-05-18T14:25:04.4801515Z ** building package indices 2021-05-18T14:25:04.8307963Z ** installing vignettes 2021-05-18T14:25:04.8434605Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:25:05.3059719Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:25:05.3236825Z ** testing if installed package can be loaded from final location 2021-05-18T14:25:05.8725858Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:25:05.8775241Z * DONE (dplyr) 2021-05-18T14:25:06.2371300Z * installing *source* package ‘tidyr’ ... 2021-05-18T14:25:06.2444833Z ** package ‘tidyr’ successfully unpacked and MD5 sums checked 2021-05-18T14:25:06.2446458Z ** using staged installation 2021-05-18T14:25:06.2624433Z ** libs 2021-05-18T14:25:06.2685741Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c cpp11.cpp -o cpp11.o 2021-05-18T14:25:07.2083093Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c fill.cpp -o fill.o 2021-05-18T14:25:07.5304840Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c melt.cpp -o melt.o 2021-05-18T14:25:09.1464661Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c simplifyPieces.cpp -o simplifyPieces.o 2021-05-18T14:25:10.3877843Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tidyr.so cpp11.o fill.o melt.o simplifyPieces.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:25:10.4612706Z installing to /home/runner/work/_temp/Library/00LOCK-tidyr/00new/tidyr/libs 2021-05-18T14:25:10.4640152Z ** R 2021-05-18T14:25:10.4789865Z ** data 2021-05-18T14:25:10.4801651Z *** moving datasets to lazyload DB 2021-05-18T14:25:10.6626330Z ** inst 2021-05-18T14:25:10.6648391Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:25:12.3684550Z ** help 2021-05-18T14:25:12.4830293Z *** installing help indices 2021-05-18T14:25:12.5578920Z *** copying figures 2021-05-18T14:25:12.5584245Z ** building package indices 2021-05-18T14:25:12.8080433Z ** installing vignettes 2021-05-18T14:25:12.8189555Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:25:13.2974504Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:25:13.3161752Z ** testing if installed package can be loaded from final location 2021-05-18T14:25:13.8158021Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:25:13.8175273Z * DONE (tidyr) 2021-05-18T14:25:13.8321036Z 2021-05-18T14:25:13.8322320Z The downloaded source packages are in 2021-05-18T14:25:13.8323777Z ‘/tmp/RtmpjhTgLB/downloaded_packages’ 2021-05-18T14:25:14.0158415Z 2021-05-18T14:25:14.0163060Z checking for file ‘/tmp/RtmpjhTgLB/remotes73e5366d3303/muschellij2-aghast-0c3b853/DESCRIPTION’ ... 2021-05-18T14:25:14.0164291Z 2021-05-18T14:25:14.0170847Z checking for file ‘/tmp/RtmpjhTgLB/remotes73e5366d3303/muschellij2-aghast-0c3b853/DESCRIPTION’ ... 2021-05-18T14:25:14.0211960Z 2021-05-18T14:25:14.0213954Z ✔ checking for file ‘/tmp/RtmpjhTgLB/remotes73e5366d3303/muschellij2-aghast-0c3b853/DESCRIPTION’ 2021-05-18T14:25:14.0320173Z 2021-05-18T14:25:14.0321015Z 2021-05-18T14:25:14.0321979Z ─ preparing ‘aghast’: 2021-05-18T14:25:14.0322454Z 2021-05-18T14:25:14.0322906Z 2021-05-18T14:25:14.0385103Z checking DESCRIPTION meta-information ... 2021-05-18T14:25:14.0411333Z 2021-05-18T14:25:14.0413257Z ✔ checking DESCRIPTION meta-information 2021-05-18T14:25:14.0645858Z 2021-05-18T14:25:14.0673701Z 2021-05-18T14:25:14.0676204Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-18T14:25:14.0685577Z 2021-05-18T14:25:14.0710315Z 2021-05-18T14:25:14.0712389Z ─ checking for empty or unneeded directories 2021-05-18T14:25:14.0715502Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-18T14:25:14.0724295Z 2021-05-18T14:25:14.0749737Z 2021-05-18T14:25:14.0751707Z ─ building ‘aghast_0.2.1.tar.gz’ 2021-05-18T14:25:14.0828054Z 2021-05-18T14:25:14.0831181Z 2021-05-18T14:25:14.0832441Z 2021-05-18T14:25:14.0906332Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:25:14.0907376Z (as ‘lib’ is unspecified) 2021-05-18T14:25:14.2954959Z * installing *source* package ‘aghast’ ... 2021-05-18T14:25:14.2956497Z ** using staged installation 2021-05-18T14:25:14.3115273Z ** R 2021-05-18T14:25:14.3168857Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:25:14.7443637Z ** help 2021-05-18T14:25:14.7747506Z *** installing help indices 2021-05-18T14:25:14.7968837Z ** building package indices 2021-05-18T14:25:14.9984919Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:25:15.1749116Z ** testing if installed package can be loaded from final location 2021-05-18T14:25:15.3556374Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:25:15.3562806Z * DONE (aghast) 2021-05-18T14:25:15.3653886Z Installing 1 packages: covr 2021-05-18T14:25:15.3663038Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:25:15.3663839Z (as ‘lib’ is unspecified) 2021-05-18T14:25:29.9947566Z also installing the dependencies ‘lazyeval’, ‘rex’ 2021-05-18T14:25:29.9948676Z 2021-05-18T14:25:29.9954461Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lazyeval_0.2.2.tar.gz' 2021-05-18T14:25:30.6863102Z Content type 'application/x-tar' length 83462 bytes (81 KB) 2021-05-18T14:25:30.6864690Z ================================================== 2021-05-18T14:25:30.6865352Z downloaded 81 KB 2021-05-18T14:25:30.6865773Z 2021-05-18T14:25:30.6867391Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rex_1.2.0.tar.gz' 2021-05-18T14:25:30.6868993Z Content type 'binary/octet-stream' length 91701 bytes (89 KB) 2021-05-18T14:25:30.6869794Z ================================================== 2021-05-18T14:25:30.6870367Z downloaded 89 KB 2021-05-18T14:25:30.6870769Z 2021-05-18T14:25:30.6872313Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/covr_3.5.1.tar.gz' 2021-05-18T14:25:30.6931018Z Content type 'binary/octet-stream' length 147467 bytes (144 KB) 2021-05-18T14:25:30.7055994Z ================================================== 2021-05-18T14:25:30.7056518Z downloaded 144 KB 2021-05-18T14:25:30.7056794Z 2021-05-18T14:25:30.9629654Z * installing *source* package ‘lazyeval’ ... 2021-05-18T14:25:30.9657282Z ** package ‘lazyeval’ successfully unpacked and MD5 sums checked 2021-05-18T14:25:30.9658482Z ** using staged installation 2021-05-18T14:25:30.9784849Z ** libs 2021-05-18T14:25:30.9834332Z 2021-05-18T14:25:30.9836066Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c expr.c -o expr.o 2021-05-18T14:25:31.0443359Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:25:31.0826483Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c interp.c -o interp.o 2021-05-18T14:25:31.1418856Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c lazy.c -o lazy.o 2021-05-18T14:25:31.2160988Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c name.c -o name.o 2021-05-18T14:25:31.2772029Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-18T14:25:31.3466901Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o lazyeval.so expr.o init.o interp.o lazy.o name.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:25:31.3722217Z installing to /home/runner/work/_temp/Library/00LOCK-lazyeval/00new/lazyeval/libs 2021-05-18T14:25:31.3723504Z ** R 2021-05-18T14:25:31.3774573Z ** inst 2021-05-18T14:25:31.3786696Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:25:31.8711396Z ** help 2021-05-18T14:25:31.9247608Z *** installing help indices 2021-05-18T14:25:31.9689811Z ** building package indices 2021-05-18T14:25:32.1911143Z ** installing vignettes 2021-05-18T14:25:32.1980028Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:25:32.3791786Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:25:32.3971424Z ** testing if installed package can be loaded from final location 2021-05-18T14:25:32.5804654Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:25:32.5813565Z * DONE (lazyeval) 2021-05-18T14:25:32.8329867Z * installing *source* package ‘rex’ ... 2021-05-18T14:25:32.8353026Z ** package ‘rex’ successfully unpacked and MD5 sums checked 2021-05-18T14:25:32.8354203Z ** using staged installation 2021-05-18T14:25:32.8492410Z ** R 2021-05-18T14:25:32.8547923Z ** inst 2021-05-18T14:25:32.8558294Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:25:33.3546093Z ** help 2021-05-18T14:25:33.4051071Z *** installing help indices 2021-05-18T14:25:33.4425721Z ** building package indices 2021-05-18T14:25:33.6535985Z ** installing vignettes 2021-05-18T14:25:33.6625321Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:25:33.8390074Z ** testing if installed package can be loaded from final location 2021-05-18T14:25:34.0197802Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:25:34.0206806Z * DONE (rex) 2021-05-18T14:25:34.3692899Z * installing *source* package ‘covr’ ... 2021-05-18T14:25:34.3754284Z ** package ‘covr’ successfully unpacked and MD5 sums checked 2021-05-18T14:25:34.3757468Z ** using staged installation 2021-05-18T14:25:34.3970139Z ** libs 2021-05-18T14:25:34.4020541Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o 2021-05-18T14:25:34.4561544Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o covr.so reassign.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:25:34.4721224Z installing to /home/runner/work/_temp/Library/00LOCK-covr/00new/covr/libs 2021-05-18T14:25:34.4733595Z ** R 2021-05-18T14:25:34.4867584Z ** inst 2021-05-18T14:25:34.4889914Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:25:35.7946143Z ** help 2021-05-18T14:25:35.8555660Z *** installing help indices 2021-05-18T14:25:35.9035512Z *** copying figures 2021-05-18T14:25:35.9037030Z ** building package indices 2021-05-18T14:25:36.1320517Z ** installing vignettes 2021-05-18T14:25:36.1362769Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:25:36.3347165Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:25:36.3520343Z ** testing if installed package can be loaded from final location 2021-05-18T14:25:36.5694353Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:25:36.5711214Z * DONE (covr) 2021-05-18T14:25:36.5812563Z 2021-05-18T14:25:36.5813565Z The downloaded source packages are in 2021-05-18T14:25:36.5814915Z ‘/tmp/RtmpjhTgLB/downloaded_packages’ 2021-05-18T14:25:36.5979746Z ##[group]Run Rscript -e "tic::before_install()" 2021-05-18T14:25:36.5980354Z Rscript -e "tic::before_install()" 2021-05-18T14:25:36.6026175Z shell: /usr/bin/bash -e {0} 2021-05-18T14:25:36.6026544Z env: 2021-05-18T14:25:36.6027135Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:25:36.6027596Z TIC_DEPLOY_KEY: 2021-05-18T14:25:36.6028359Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:25:36.6030119Z GITHUB_PAT: *** 2021-05-18T14:25:36.6031124Z COVERALLS_TOKEN: *** 2021-05-18T14:25:36.6031589Z continue-on-error: true 2021-05-18T14:25:36.6032047Z VDIFFR_RUN_TESTS: 2021-05-18T14:25:36.6032508Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:25:36.6032921Z TZ: UTC 2021-05-18T14:25:36.6033294Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:25:36.6033675Z NOT_CRAN: true 2021-05-18T14:25:36.6034034Z ##[endgroup] 2021-05-18T14:25:36.8809920Z ✔ Loading tic stage configuration from tic.R 2021-05-18T14:25:37.0119204Z Running before_install: step_install_remote_binaries() 2021-05-18T14:25:37.5494659Z Installing RAVELData binaries 2021-05-18T14:25:37.5504390Z [1] "neuroconductor/RAVELData" 2021-05-18T14:25:37.8246171Z OK (HTTP 200).OK (HTTP 200).No Binaries Found, exiting 2021-05-18T14:25:37.8253243Z Installing oro.nifti binaries 2021-05-18T14:25:37.8260659Z [1] "neuroconductor/oro.nifti" 2021-05-18T14:25:37.9634213Z OK (HTTP 200).OK (HTTP 200).No Binaries Found, exiting 2021-05-18T14:25:37.9641203Z Installing EveTemplate binaries 2021-05-18T14:25:37.9648607Z [1] "neuroconductor/EveTemplate" 2021-05-18T14:25:38.1047750Z OK (HTTP 200).OK (HTTP 200).No Binaries Found, exiting 2021-05-18T14:25:38.1054591Z Installing WhiteStripe binaries 2021-05-18T14:25:38.1062108Z [1] "neuroconductor/WhiteStripe" 2021-05-18T14:25:38.2440554Z OK (HTTP 200).OK (HTTP 200).No Binaries Found, exiting 2021-05-18T14:25:38.2447317Z Installing neurobase binaries 2021-05-18T14:25:38.2454938Z [1] "neuroconductor/neurobase" 2021-05-18T14:25:38.4139023Z OK (HTTP 200).OK (HTTP 200).No Binaries Found, exiting 2021-05-18T14:25:38.4261015Z ##[group]Run remotes::install_deps(dependencies = TRUE) 2021-05-18T14:25:38.4261737Z remotes::install_deps(dependencies = TRUE) 2021-05-18T14:25:38.4262319Z remotes::install_cran("rcmdcheck") 2021-05-18T14:25:38.4262868Z remotes::install_cran("markdown") 2021-05-18T14:25:38.4270068Z shell: /usr/local/bin/Rscript {0} 2021-05-18T14:25:38.4270486Z env: 2021-05-18T14:25:38.4270904Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:25:38.4271340Z TIC_DEPLOY_KEY: 2021-05-18T14:25:38.4272121Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:25:38.4273618Z GITHUB_PAT: *** 2021-05-18T14:25:38.4274442Z COVERALLS_TOKEN: *** 2021-05-18T14:25:38.4274934Z continue-on-error: true 2021-05-18T14:25:38.4275423Z VDIFFR_RUN_TESTS: 2021-05-18T14:25:38.4275873Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:25:38.4276298Z TZ: UTC 2021-05-18T14:25:38.4276654Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:25:38.4277084Z NOT_CRAN: true 2021-05-18T14:25:38.4277445Z ##[endgroup] 2021-05-18T14:25:56.7178404Z RAVELData (NA -> 253a47f28...) [GitHub] 2021-05-18T14:25:56.7179948Z oro.nifti (NA -> bd06b05d2...) [GitHub] 2021-05-18T14:25:56.7181139Z EveTemplate (NA -> 9f904f84f...) [GitHub] 2021-05-18T14:25:56.7182230Z WhiteStripe (NA -> 2642ac54c...) [GitHub] 2021-05-18T14:25:56.7183293Z neurobase (NA -> 1d4b17291...) [GitHub] 2021-05-18T14:25:56.7184309Z base64enc (NA -> 0.1-3 ) [CRAN] 2021-05-18T14:25:56.7185278Z tinytex (NA -> 0.31 ) [CRAN] 2021-05-18T14:25:56.7186210Z htmltools (NA -> 0.5.1.1 ) [CRAN] 2021-05-18T14:25:56.7187150Z rmarkdown (NA -> 2.8 ) [CRAN] 2021-05-18T14:25:56.7188101Z R.methodsS3 (NA -> 1.8.1 ) [CRAN] 2021-05-18T14:25:56.7189020Z R.oo (NA -> 1.24.0 ) [CRAN] 2021-05-18T14:25:56.7190119Z bitops (NA -> 1.0-7 ) [CRAN] 2021-05-18T14:25:56.7191039Z RNifti (NA -> 1.3.1 ) [CRAN] 2021-05-18T14:25:56.7191943Z R.utils (NA -> 2.10.1 ) [CRAN] 2021-05-18T14:25:56.7192873Z matrixStats (NA -> 0.58.0 ) [CRAN] 2021-05-18T14:25:56.7193787Z abind (NA -> 1.4-5 ) [CRAN] 2021-05-18T14:25:56.7194767Z BiocManager (NA -> 1.30.15 ) [CRAN] 2021-05-18T14:25:56.7198308Z bookdown (NA -> 0.22 ) [CRAN] 2021-05-18T14:25:56.7199030Z BiocStyle (NA -> 2.19.2 ) [CRAN] 2021-05-18T14:25:56.7199969Z limma (NA -> 3.47.15 ) [CRAN] 2021-05-18T14:25:56.7200670Z pbapply (NA -> 1.4-3 ) [CRAN] 2021-05-18T14:25:56.8943189Z Downloading GitHub repo neuroconductor/RAVELData@253a47f28c220e3c238bd5260af75a7fcfb5b761 2021-05-18T14:26:01.4561182Z 2021-05-18T14:26:01.4577942Z checking for file ‘/tmp/RtmpO5jLnL/remotesd60139c47eca/neuroconductor-RAVELData-253a47f/DESCRIPTION’ ... 2021-05-18T14:26:01.4648625Z 2021-05-18T14:26:01.4651705Z ✔ checking for file ‘/tmp/RtmpO5jLnL/remotesd60139c47eca/neuroconductor-RAVELData-253a47f/DESCRIPTION’ 2021-05-18T14:26:01.5166762Z 2021-05-18T14:26:01.5197108Z 2021-05-18T14:26:01.5199796Z ─ preparing ‘RAVELData’: 2021-05-18T14:26:01.5212257Z checking DESCRIPTION meta-information ... 2021-05-18T14:26:01.5237805Z 2021-05-18T14:26:01.5240414Z ✔ checking DESCRIPTION meta-information 2021-05-18T14:26:01.5336779Z 2021-05-18T14:26:01.5361716Z 2021-05-18T14:26:01.5363785Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-18T14:26:01.5372154Z 2021-05-18T14:26:01.5393195Z 2021-05-18T14:26:01.5395029Z ─ checking for empty or unneeded directories 2021-05-18T14:26:01.5415970Z ─ building ‘RAVELData_0.99.1.tar.gz’ 2021-05-18T14:26:05.7011209Z 2021-05-18T14:26:05.7012207Z 2021-05-18T14:26:05.7012745Z 2021-05-18T14:26:05.7977112Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:26:05.7978818Z (as ‘lib’ is unspecified) 2021-05-18T14:26:08.2271850Z * installing *source* package ‘RAVELData’ ... 2021-05-18T14:26:08.2273330Z ** using staged installation 2021-05-18T14:26:08.2410581Z ** inst 2021-05-18T14:26:08.3112228Z ** help 2021-05-18T14:26:08.3112706Z 2021-05-18T14:26:08.3114617Z No man pages found in package ‘RAVELData’ 2021-05-18T14:26:08.3161807Z *** installing help indices 2021-05-18T14:26:08.3247439Z ** building package indices 2021-05-18T14:26:08.4958675Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:26:08.6696825Z ** testing if installed package can be loaded from final location 2021-05-18T14:26:08.8398507Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:26:08.8404351Z * DONE (RAVELData) 2021-05-18T14:26:09.0913396Z Downloading GitHub repo neuroconductor/oro.nifti@bd06b05d2a090c743e51d745a826e8b77af278f0 2021-05-18T14:26:10.9139469Z RNifti (NA -> 929106d1b...) [GitHub] 2021-05-18T14:26:10.9140295Z base64enc (NA -> 0.1-3 ) [CRAN] 2021-05-18T14:26:10.9140920Z tinytex (NA -> 0.31 ) [CRAN] 2021-05-18T14:26:10.9141543Z htmltools (NA -> 0.5.1.1 ) [CRAN] 2021-05-18T14:26:10.9142185Z rmarkdown (NA -> 2.8 ) [CRAN] 2021-05-18T14:26:10.9142802Z rticles (NA -> 0.19 ) [CRAN] 2021-05-18T14:26:10.9143399Z abind (NA -> 1.4-5 ) [CRAN] 2021-05-18T14:26:10.9143974Z bitops (NA -> 1.0-7 ) [CRAN] 2021-05-18T14:26:11.1159683Z Downloading GitHub repo neuroconductor/RNifti@929106d1b17d6c09c8b001b5e39d448ed9ef635f 2021-05-18T14:26:12.4234541Z 2021-05-18T14:26:12.6070455Z 2021-05-18T14:26:12.6081656Z checking for file ‘/tmp/RtmpO5jLnL/remotesd6014c7856ed/neuroconductor-RNifti-929106d/DESCRIPTION’ ... 2021-05-18T14:26:12.6108842Z 2021-05-18T14:26:12.6111273Z ✔ checking for file ‘/tmp/RtmpO5jLnL/remotesd6014c7856ed/neuroconductor-RNifti-929106d/DESCRIPTION’ 2021-05-18T14:26:12.6208381Z 2021-05-18T14:26:12.6241636Z 2021-05-18T14:26:12.6242877Z ─ preparing ‘RNifti’: 2021-05-18T14:26:12.6243368Z 2021-05-18T14:26:12.6243823Z 2021-05-18T14:26:12.6350614Z checking DESCRIPTION meta-information ... 2021-05-18T14:26:12.6373406Z 2021-05-18T14:26:12.6375459Z ✔ checking DESCRIPTION meta-information 2021-05-18T14:26:12.6396135Z ─ cleaning src 2021-05-18T14:26:12.6403868Z 2021-05-18T14:26:12.6423646Z 2021-05-18T14:26:12.6430055Z ─ running ‘cleanup’ 2021-05-18T14:26:12.6890800Z 2021-05-18T14:26:12.6920163Z 2021-05-18T14:26:12.6922882Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-18T14:26:12.7264433Z 2021-05-18T14:26:12.7291323Z 2021-05-18T14:26:12.7293494Z ─ checking for empty or unneeded directories 2021-05-18T14:26:12.7316542Z 2021-05-18T14:26:12.7339456Z 2021-05-18T14:26:12.7341306Z ─ building ‘RNifti_1.3.1.tar.gz’ 2021-05-18T14:26:13.0269888Z 2021-05-18T14:26:13.0273093Z 2021-05-18T14:26:13.0274500Z 2021-05-18T14:26:13.0763325Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:26:13.0781678Z (as ‘lib’ is unspecified) 2021-05-18T14:26:13.4104410Z * installing *source* package ‘RNifti’ ... 2021-05-18T14:26:13.4105809Z ** using staged installation 2021-05-18T14:26:13.4270790Z ** libs 2021-05-18T14:26:13.4324041Z 2021-05-18T14:26:13.4326792Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c main.cpp -o main.o 2021-05-18T14:26:31.4491137Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zzz.c -o zzz.o 2021-05-18T14:26:31.5341126Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/adler32.c -o zlib/adler32.o 2021-05-18T14:26:31.6199090Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/compress.c -o zlib/compress.o 2021-05-18T14:26:31.6583630Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/crc32.c -o zlib/crc32.o 2021-05-18T14:26:31.7664184Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/deflate.c -o zlib/deflate.o 2021-05-18T14:26:32.2262070Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzclose.c -o zlib/gzclose.o 2021-05-18T14:26:32.2677391Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzlib.c -o zlib/gzlib.o 2021-05-18T14:26:32.3863175Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzread.c -o zlib/gzread.o 2021-05-18T14:26:32.5372022Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzwrite.c -o zlib/gzwrite.o 2021-05-18T14:26:32.6651488Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/infback.c -o zlib/infback.o 2021-05-18T14:26:32.8973173Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inffast.c -o zlib/inffast.o 2021-05-18T14:26:33.0060494Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inflate.c -o zlib/inflate.o 2021-05-18T14:26:33.5015874Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inftrees.c -o zlib/inftrees.o 2021-05-18T14:26:33.5945997Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/trees.c -o zlib/trees.o 2021-05-18T14:26:33.8942328Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/uncompr.c -o zlib/uncompr.o 2021-05-18T14:26:33.9309101Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/zutil.c -o zlib/zutil.o 2021-05-18T14:26:33.9759886Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c znzlib/znzlib.c -o znzlib/znzlib.o 2021-05-18T14:26:34.0536895Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c niftilib/nifti1_io.c -o niftilib/nifti1_io.o 2021-05-18T14:26:35.1452551Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c niftilib/nifti2_io.c -o niftilib/nifti2_io.o 2021-05-18T14:26:37.4242606Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o RNifti.so main.o zzz.o zlib/adler32.o zlib/compress.o zlib/crc32.o zlib/deflate.o zlib/gzclose.o zlib/gzlib.o zlib/gzread.o zlib/gzwrite.o zlib/infback.o zlib/inffast.o zlib/inflate.o zlib/inftrees.o zlib/trees.o zlib/uncompr.o zlib/zutil.o znzlib/znzlib.o niftilib/nifti1_io.o niftilib/nifti2_io.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:26:37.6115611Z installing to /home/runner/work/_temp/Library/00LOCK-RNifti/00new/RNifti/libs 2021-05-18T14:26:37.6243295Z ** R 2021-05-18T14:26:37.6321129Z ** inst 2021-05-18T14:26:37.6350508Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:26:38.4112473Z ** help 2021-05-18T14:26:38.4629613Z *** installing help indices 2021-05-18T14:26:38.4974420Z ** building package indices 2021-05-18T14:26:38.7107640Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:26:38.9770473Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:26:39.0029347Z ** testing if installed package can be loaded from final location 2021-05-18T14:26:39.2748059Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:26:39.2760385Z * DONE (RNifti) 2021-05-18T14:26:39.2915987Z Installing 7 packages: base64enc, tinytex, htmltools, rmarkdown, rticles, abind, bitops 2021-05-18T14:26:39.2931413Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:26:39.2932439Z (as ‘lib’ is unspecified) 2021-05-18T14:26:54.3939408Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/base64enc_0.1-3.tar.gz' 2021-05-18T14:26:54.8996337Z Content type 'application/x-tar' length 7843 bytes 2021-05-18T14:26:54.8997089Z ================================================== 2021-05-18T14:26:54.8997584Z downloaded 7843 bytes 2021-05-18T14:26:54.8998139Z 2021-05-18T14:26:54.9123956Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tinytex_0.31.tar.gz' 2021-05-18T14:26:55.2675295Z Content type 'binary/octet-stream' length 29350 bytes (28 KB) 2021-05-18T14:26:55.2678525Z ================================================== 2021-05-18T14:26:55.2679165Z downloaded 28 KB 2021-05-18T14:26:55.2680332Z 2021-05-18T14:26:55.2723004Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/htmltools_0.5.1.1.tar.gz' 2021-05-18T14:26:56.7190094Z Content type 'binary/octet-stream' length 72110 bytes (70 KB) 2021-05-18T14:26:56.7191406Z ================================================== 2021-05-18T14:26:56.7192009Z downloaded 70 KB 2021-05-18T14:26:56.7192424Z 2021-05-18T14:26:56.7235190Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rmarkdown_2.8.tar.gz' 2021-05-18T14:26:57.1217739Z Content type 'binary/octet-stream' length 3236609 bytes (3.1 MB) 2021-05-18T14:26:57.2203381Z ================================================== 2021-05-18T14:26:57.2204490Z downloaded 3.1 MB 2021-05-18T14:26:57.2205011Z 2021-05-18T14:26:57.2245008Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rticles_0.19.tar.gz' 2021-05-18T14:26:58.8802540Z Content type 'binary/octet-stream' length 1634953 bytes (1.6 MB) 2021-05-18T14:26:58.9134705Z ================================================== 2021-05-18T14:26:58.9135746Z downloaded 1.6 MB 2021-05-18T14:26:58.9136277Z 2021-05-18T14:26:58.9176746Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/abind_1.4-5.tar.gz' 2021-05-18T14:27:00.4432070Z Content type 'application/x-tar' length 21895 bytes (21 KB) 2021-05-18T14:27:00.4435080Z ================================================== 2021-05-18T14:27:00.4435602Z downloaded 21 KB 2021-05-18T14:27:00.4435898Z 2021-05-18T14:27:00.4483067Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bitops_1.0-7.tar.gz' 2021-05-18T14:27:00.8664832Z Content type 'binary/octet-stream' length 10887 bytes (10 KB) 2021-05-18T14:27:00.8665530Z ================================================== 2021-05-18T14:27:00.8665963Z downloaded 10 KB 2021-05-18T14:27:00.8666237Z 2021-05-18T14:27:01.0656665Z * installing *source* package ‘base64enc’ ... 2021-05-18T14:27:01.0663855Z ** package ‘base64enc’ successfully unpacked and MD5 sums checked 2021-05-18T14:27:01.0664913Z ** using staged installation 2021-05-18T14:27:01.0765166Z ** libs 2021-05-18T14:27:01.0813853Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-18T14:27:01.1882282Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c uriencode.c -o uriencode.o 2021-05-18T14:27:01.2614976Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-18T14:27:01.3332395Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o base64enc.so base64.o uriencode.o utf8.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:27:01.3561199Z installing to /home/runner/work/_temp/Library/00LOCK-base64enc/00new/base64enc/libs 2021-05-18T14:27:01.3575446Z ** R 2021-05-18T14:27:01.3603054Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:27:01.6102633Z ** help 2021-05-18T14:27:01.6330781Z *** installing help indices 2021-05-18T14:27:01.6493479Z ** building package indices 2021-05-18T14:27:01.8390626Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:27:02.0165840Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:27:02.0341374Z ** testing if installed package can be loaded from final location 2021-05-18T14:27:02.2064740Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:27:02.2070016Z * DONE (base64enc) 2021-05-18T14:27:02.4213096Z * installing *source* package ‘tinytex’ ... 2021-05-18T14:27:02.4225398Z ** package ‘tinytex’ successfully unpacked and MD5 sums checked 2021-05-18T14:27:02.4226718Z ** using staged installation 2021-05-18T14:27:02.4437064Z ** R 2021-05-18T14:27:02.4503519Z ** inst 2021-05-18T14:27:02.4510120Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:27:03.1420806Z ** help 2021-05-18T14:27:03.1737590Z *** installing help indices 2021-05-18T14:27:03.2004672Z ** building package indices 2021-05-18T14:27:03.4045392Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:27:03.5942376Z ** testing if installed package can be loaded from final location 2021-05-18T14:27:03.7930258Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:27:03.7944130Z * DONE (tinytex) 2021-05-18T14:27:04.7138829Z * installing *source* package ‘abind’ ... 2021-05-18T14:27:04.7140475Z ** package ‘abind’ successfully unpacked and MD5 sums checked 2021-05-18T14:27:04.7141530Z ** using staged installation 2021-05-18T14:27:04.7142060Z ** R 2021-05-18T14:27:04.7142468Z ** inst 2021-05-18T14:27:04.7143751Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:27:04.7144345Z ** help 2021-05-18T14:27:04.7144845Z *** installing help indices 2021-05-18T14:27:04.7145420Z ** building package indices 2021-05-18T14:27:04.8280709Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:27:05.0044080Z ** testing if installed package can be loaded from final location 2021-05-18T14:27:05.1894490Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:27:05.1904098Z * DONE (abind) 2021-05-18T14:27:05.3940531Z * installing *source* package ‘bitops’ ... 2021-05-18T14:27:05.3948520Z ** package ‘bitops’ successfully unpacked and MD5 sums checked 2021-05-18T14:27:05.3949574Z ** using staged installation 2021-05-18T14:27:05.4043430Z ** libs 2021-05-18T14:27:05.4091627Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bit-ops.c -o bit-ops.o 2021-05-18T14:27:05.5857785Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cksum.c -o cksum.o 2021-05-18T14:27:05.6447738Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:27:05.6916531Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o bitops.so bit-ops.o cksum.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:27:05.7081337Z installing to /home/runner/work/_temp/Library/00LOCK-bitops/00new/bitops/libs 2021-05-18T14:27:05.7092151Z ** R 2021-05-18T14:27:05.7117566Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:27:05.9298552Z ** help 2021-05-18T14:27:05.9548214Z *** installing help indices 2021-05-18T14:27:05.9722552Z ** building package indices 2021-05-18T14:27:06.1596113Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:27:06.3388880Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:27:06.3562085Z ** testing if installed package can be loaded from final location 2021-05-18T14:27:06.5314896Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:27:06.5320375Z * DONE (bitops) 2021-05-18T14:27:06.7783276Z * installing *source* package ‘htmltools’ ... 2021-05-18T14:27:06.7804527Z ** package ‘htmltools’ successfully unpacked and MD5 sums checked 2021-05-18T14:27:06.7805702Z ** using staged installation 2021-05-18T14:27:06.7953336Z ** libs 2021-05-18T14:27:06.8001063Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:27:06.8447537Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c template.c -o template.o 2021-05-18T14:27:06.9491709Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o htmltools.so init.o template.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:27:06.9710561Z installing to /home/runner/work/_temp/Library/00LOCK-htmltools/00new/htmltools/libs 2021-05-18T14:27:06.9723814Z ** R 2021-05-18T14:27:06.9848169Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:27:08.4154781Z ** help 2021-05-18T14:27:08.4947288Z *** installing help indices 2021-05-18T14:27:08.5522484Z ** building package indices 2021-05-18T14:27:08.7963864Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:27:09.0039733Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:27:09.0219812Z ** testing if installed package can be loaded from final location 2021-05-18T14:27:09.2495239Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:27:09.2511268Z * DONE (htmltools) 2021-05-18T14:27:10.0270413Z * installing *source* package ‘rmarkdown’ ... 2021-05-18T14:27:10.0549724Z ** package ‘rmarkdown’ successfully unpacked and MD5 sums checked 2021-05-18T14:27:10.0551288Z ** using staged installation 2021-05-18T14:27:10.0828987Z ** R 2021-05-18T14:27:10.1203524Z ** inst 2021-05-18T14:27:10.1424410Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:27:13.5884415Z ** help 2021-05-18T14:27:13.7815779Z *** installing help indices 2021-05-18T14:27:13.9414302Z *** copying figures 2021-05-18T14:27:13.9416644Z ** building package indices 2021-05-18T14:27:14.2353041Z ** installing vignettes 2021-05-18T14:27:14.2432105Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:27:14.4917455Z ** testing if installed package can be loaded from final location 2021-05-18T14:27:14.7990130Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:27:14.8048372Z * DONE (rmarkdown) 2021-05-18T14:27:15.3690459Z * installing *source* package ‘rticles’ ... 2021-05-18T14:27:15.3855504Z ** package ‘rticles’ successfully unpacked and MD5 sums checked 2021-05-18T14:27:15.3857083Z ** using staged installation 2021-05-18T14:27:15.4072220Z ** R 2021-05-18T14:27:15.4133513Z ** inst 2021-05-18T14:27:15.4358809Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:27:15.8815934Z ** help 2021-05-18T14:27:15.9196392Z *** installing help indices 2021-05-18T14:27:15.9529567Z ** building package indices 2021-05-18T14:27:16.1605277Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:27:16.4116072Z ** testing if installed package can be loaded from final location 2021-05-18T14:27:16.6609002Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:27:16.6650576Z * DONE (rticles) 2021-05-18T14:27:16.6787160Z 2021-05-18T14:27:16.6788166Z The downloaded source packages are in 2021-05-18T14:27:16.6789486Z ‘/tmp/RtmpO5jLnL/downloaded_packages’ 2021-05-18T14:27:16.7675973Z Skipping install of 'RNifti' from a github remote, the SHA1 (929106d1) has not changed since last install. 2021-05-18T14:27:16.7677417Z Use `force = TRUE` to force installation 2021-05-18T14:27:16.9560978Z 2021-05-18T14:27:16.9575005Z checking for file ‘/tmp/RtmpO5jLnL/remotesd6013c1e7545/neuroconductor-oro.nifti-bd06b05/DESCRIPTION’ ... 2021-05-18T14:27:16.9601081Z 2021-05-18T14:27:16.9603634Z ✔ checking for file ‘/tmp/RtmpO5jLnL/remotesd6013c1e7545/neuroconductor-oro.nifti-bd06b05/DESCRIPTION’ 2021-05-18T14:27:16.9870015Z 2021-05-18T14:27:16.9871083Z 2021-05-18T14:27:16.9872360Z ─ preparing ‘oro.nifti’: 2021-05-18T14:27:16.9990500Z checking DESCRIPTION meta-information ... 2021-05-18T14:27:16.9991334Z 2021-05-18T14:27:16.9998841Z checking DESCRIPTION meta-information ... 2021-05-18T14:27:17.0022809Z 2021-05-18T14:27:17.0024771Z ✔ checking DESCRIPTION meta-information 2021-05-18T14:27:17.1421708Z 2021-05-18T14:27:17.1450463Z 2021-05-18T14:27:17.1453126Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-18T14:27:17.1463428Z 2021-05-18T14:27:17.1487367Z 2021-05-18T14:27:17.1489585Z ─ checking for empty or unneeded directories 2021-05-18T14:27:17.1492838Z Removed empty directory ‘oro.nifti/vignettes’ 2021-05-18T14:27:17.1501203Z 2021-05-18T14:27:17.1503577Z 2021-05-18T14:27:17.1506030Z Omitted ‘LazyData’ and ‘LazyDataCompression’ from DESCRIPTION 2021-05-18T14:27:17.1610365Z 2021-05-18T14:27:17.1633063Z 2021-05-18T14:27:17.1635093Z ─ building ‘oro.nifti_0.10.3.tar.gz’ 2021-05-18T14:27:17.6523856Z 2021-05-18T14:27:17.6526607Z 2021-05-18T14:27:17.6527841Z 2021-05-18T14:27:17.6696852Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:27:17.6698100Z (as ‘lib’ is unspecified) 2021-05-18T14:27:18.1981117Z * installing *source* package ‘oro.nifti’ ... 2021-05-18T14:27:18.1983737Z ** using staged installation 2021-05-18T14:27:18.2178145Z ** R 2021-05-18T14:27:18.2618550Z ** demo 2021-05-18T14:27:18.2625362Z ** inst 2021-05-18T14:27:18.2697515Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:27:24.9895913Z 2021-05-18T14:27:24.9897862Z Creating a new generic function for ‘origin’ in package ‘oro.nifti’ 2021-05-18T14:27:24.9898735Z ** help 2021-05-18T14:27:25.3669676Z *** installing help indices 2021-05-18T14:27:25.6717588Z ** building package indices 2021-05-18T14:27:26.0910911Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:27:26.6781665Z ** testing if installed package can be loaded from final location 2021-05-18T14:27:27.3818553Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:27:27.3899680Z * DONE (oro.nifti) 2021-05-18T14:27:27.6248119Z Downloading GitHub repo neuroconductor/EveTemplate@9f904f84f78a58f05ea12ee1f20176301e172fb3 2021-05-18T14:27:30.6789862Z 2021-05-18T14:27:30.8676684Z 2021-05-18T14:27:30.8683015Z checking for file ‘/tmp/RtmpO5jLnL/remotesd6015c050b35/neuroconductor-EveTemplate-9f904f8/DESCRIPTION’ ... 2021-05-18T14:27:30.8684418Z 2021-05-18T14:27:30.8690194Z checking for file ‘/tmp/RtmpO5jLnL/remotesd6015c050b35/neuroconductor-EveTemplate-9f904f8/DESCRIPTION’ ... 2021-05-18T14:27:30.8719298Z 2021-05-18T14:27:30.8721532Z ✔ checking for file ‘/tmp/RtmpO5jLnL/remotesd6015c050b35/neuroconductor-EveTemplate-9f904f8/DESCRIPTION’ 2021-05-18T14:27:30.9113574Z 2021-05-18T14:27:30.9114702Z 2021-05-18T14:27:30.9116035Z ─ preparing ‘EveTemplate’: 2021-05-18T14:27:30.9127870Z checking DESCRIPTION meta-information ... 2021-05-18T14:27:30.9152356Z 2021-05-18T14:27:30.9154527Z ✔ checking DESCRIPTION meta-information 2021-05-18T14:27:30.9351439Z 2021-05-18T14:27:30.9378364Z 2021-05-18T14:27:30.9380852Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-18T14:27:30.9390677Z 2021-05-18T14:27:30.9415153Z 2021-05-18T14:27:30.9417086Z ─ checking for empty or unneeded directories 2021-05-18T14:27:30.9810562Z ─ building ‘EveTemplate_1.0.0.tar.gz’ 2021-05-18T14:27:33.2210107Z 2021-05-18T14:27:33.2213223Z 2021-05-18T14:27:33.2215040Z 2021-05-18T14:27:33.2758633Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:27:33.2760171Z (as ‘lib’ is unspecified) 2021-05-18T14:27:34.6737880Z * installing *source* package ‘EveTemplate’ ... 2021-05-18T14:27:34.6738766Z ** using staged installation 2021-05-18T14:27:34.6857768Z ** R 2021-05-18T14:27:34.6880671Z ** data 2021-05-18T14:27:34.6884125Z *** moving datasets to lazyload DB 2021-05-18T14:27:34.6957645Z ** inst 2021-05-18T14:27:34.7356819Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:27:35.3775632Z ** help 2021-05-18T14:27:35.3967677Z *** installing help indices 2021-05-18T14:27:35.4219882Z ** building package indices 2021-05-18T14:27:35.6208500Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:27:36.2292802Z ** testing if installed package can be loaded from final location 2021-05-18T14:27:36.8329310Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:27:36.8336507Z * DONE (EveTemplate) 2021-05-18T14:27:37.0435586Z Downloading GitHub repo neuroconductor/WhiteStripe@2642ac54c2fca8e1c8e39a47847ec3ac10989911 2021-05-18T14:27:38.9047062Z 2021-05-18T14:27:39.0944064Z 2021-05-18T14:27:39.0950172Z checking for file ‘/tmp/RtmpO5jLnL/remotesd60151f1f7b9/neuroconductor-WhiteStripe-2642ac5/DESCRIPTION’ ... 2021-05-18T14:27:39.0951779Z 2021-05-18T14:27:39.0959927Z checking for file ‘/tmp/RtmpO5jLnL/remotesd60151f1f7b9/neuroconductor-WhiteStripe-2642ac5/DESCRIPTION’ ... 2021-05-18T14:27:39.0996223Z 2021-05-18T14:27:39.0998348Z ✔ checking for file ‘/tmp/RtmpO5jLnL/remotesd60151f1f7b9/neuroconductor-WhiteStripe-2642ac5/DESCRIPTION’ 2021-05-18T14:27:39.1240719Z 2021-05-18T14:27:39.1583135Z 2021-05-18T14:27:39.1585418Z ─ preparing ‘WhiteStripe’: 2021-05-18T14:27:39.1602822Z checking DESCRIPTION meta-information ... 2021-05-18T14:27:39.1631467Z 2021-05-18T14:27:39.1633336Z ✔ checking DESCRIPTION meta-information 2021-05-18T14:27:39.1660778Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-18T14:27:39.1670869Z 2021-05-18T14:27:39.1697423Z 2021-05-18T14:27:39.1699277Z ─ checking for empty or unneeded directories 2021-05-18T14:27:39.1726645Z ─ building ‘WhiteStripe_2.3.2.tar.gz’ 2021-05-18T14:27:39.2165813Z 2021-05-18T14:27:39.2168419Z 2021-05-18T14:27:39.2169776Z 2021-05-18T14:27:39.2261594Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:27:39.2262842Z (as ‘lib’ is unspecified) 2021-05-18T14:27:39.4651226Z * installing *source* package ‘WhiteStripe’ ... 2021-05-18T14:27:39.4652686Z ** using staged installation 2021-05-18T14:27:39.4801424Z ** R 2021-05-18T14:27:39.4845498Z ** data 2021-05-18T14:27:39.4855680Z *** moving datasets to lazyload DB 2021-05-18T14:27:41.3656199Z ** inst 2021-05-18T14:27:41.3663359Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:27:43.0419314Z ** help 2021-05-18T14:27:43.0803374Z *** installing help indices 2021-05-18T14:27:43.1116278Z ** building package indices 2021-05-18T14:27:43.3209503Z ** installing vignettes 2021-05-18T14:27:43.3231479Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:27:44.8283418Z ** testing if installed package can be loaded from final location 2021-05-18T14:27:46.3306994Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:27:46.3314035Z * DONE (WhiteStripe) 2021-05-18T14:27:46.5603675Z Downloading GitHub repo neuroconductor/neurobase@1d4b172915192d419b4defb2e56d84d7541c03cd 2021-05-18T14:27:48.8055620Z 2021-05-18T14:27:48.8057586Z R.methodsS3 (NA -> 1.8.1 ) [CRAN] 2021-05-18T14:27:48.8058631Z Installing 4 packages: R.methodsS3, R.oo, R.utils, matrixStats 2021-05-18T14:27:48.8059907Z R.oo (NA -> 1.24.0) [CRAN] 2021-05-18T14:27:48.8060720Z R.utils (NA -> 2.10.1) [CRAN] 2021-05-18T14:27:48.8061577Z matrixStats (NA -> 0.58.0) [CRAN] 2021-05-18T14:27:48.8067194Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:27:48.8068187Z (as ‘lib’ is unspecified) 2021-05-18T14:28:03.4870076Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.methodsS3_1.8.1.tar.gz' 2021-05-18T14:28:03.8914973Z Content type 'binary/octet-stream' length 23789 bytes (23 KB) 2021-05-18T14:28:03.8916449Z ================================================== 2021-05-18T14:28:03.8917154Z downloaded 23 KB 2021-05-18T14:28:03.8917715Z 2021-05-18T14:28:03.8960189Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.oo_1.24.0.tar.gz' 2021-05-18T14:28:04.2993180Z Content type 'binary/octet-stream' length 382199 bytes (373 KB) 2021-05-18T14:28:04.3172993Z ================================================== 2021-05-18T14:28:04.3173563Z downloaded 373 KB 2021-05-18T14:28:04.3173836Z 2021-05-18T14:28:04.3216481Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.utils_2.10.1.tar.gz' 2021-05-18T14:28:04.6207915Z Content type 'binary/octet-stream' length 361740 bytes (353 KB) 2021-05-18T14:28:04.6406375Z ================================================== 2021-05-18T14:28:04.6407231Z downloaded 353 KB 2021-05-18T14:28:04.6407678Z 2021-05-18T14:28:04.6447064Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/matrixStats_0.58.0.tar.gz' 2021-05-18T14:28:05.5002961Z Content type 'binary/octet-stream' length 194842 bytes (190 KB) 2021-05-18T14:28:05.5135463Z ================================================== 2021-05-18T14:28:05.5136227Z downloaded 190 KB 2021-05-18T14:28:05.5136596Z 2021-05-18T14:28:05.7408913Z * installing *source* package ‘R.methodsS3’ ... 2021-05-18T14:28:05.7424457Z ** package ‘R.methodsS3’ successfully unpacked and MD5 sums checked 2021-05-18T14:28:05.7425396Z ** using staged installation 2021-05-18T14:28:05.7546796Z ** R 2021-05-18T14:28:05.7978627Z ** inst 2021-05-18T14:28:05.7984326Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:28:06.2640905Z ** help 2021-05-18T14:28:06.3018931Z *** installing help indices 2021-05-18T14:28:06.3366471Z ** building package indices 2021-05-18T14:28:06.5400676Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:28:06.7173128Z ** testing if installed package can be loaded from final location 2021-05-18T14:28:06.8992338Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:28:06.9001270Z * DONE (R.methodsS3) 2021-05-18T14:28:07.3254800Z * installing *source* package ‘matrixStats’ ... 2021-05-18T14:28:07.3351497Z ** package ‘matrixStats’ successfully unpacked and MD5 sums checked 2021-05-18T14:28:07.3352811Z ** using staged installation 2021-05-18T14:28:07.3499690Z ** libs 2021-05-18T14:28:07.3561501Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c 000.init.c -o 000.init.o 2021-05-18T14:28:07.3970237Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c allocMatrix2.c -o allocMatrix2.o 2021-05-18T14:28:07.4755078Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c anyMissing.c -o anyMissing.o 2021-05-18T14:28:07.5755495Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c binCounts.c -o binCounts.o 2021-05-18T14:28:07.6672278Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c binMeans.c -o binMeans.o 2021-05-18T14:28:07.7987053Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colCounts.c -o colCounts.o 2021-05-18T14:28:09.0579925Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colOrderStats.c -o colOrderStats.o 2021-05-18T14:28:09.4061995Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colRanges.c -o colRanges.o 2021-05-18T14:28:10.7982684Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diff2.c -o diff2.o 2021-05-18T14:28:11.0018159Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c indexByRow.c -o indexByRow.o 2021-05-18T14:28:11.0638539Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c logSumExp.c -o logSumExp.o 2021-05-18T14:28:11.2571653Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mean2.c -o mean2.o 2021-05-18T14:28:11.3956633Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c productExpSumLog.c -o productExpSumLog.o 2021-05-18T14:28:11.5405352Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c psortKM.c -o psortKM.o 2021-05-18T14:28:11.6051628Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCounts.c -o rowCounts.o 2021-05-18T14:28:12.9502878Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCummaxs.c -o rowCummaxs.o 2021-05-18T14:28:13.9364518Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCummins.c -o rowCummins.o 2021-05-18T14:28:14.9213709Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCumprods.c -o rowCumprods.o 2021-05-18T14:28:15.7508335Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCumsums.c -o rowCumsums.o 2021-05-18T14:28:16.5854860Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowDiffs.c -o rowDiffs.o 2021-05-18T14:28:18.5063677Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowLogSumExp.c -o rowLogSumExp.o 2021-05-18T14:28:18.6359580Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMads.c -o rowMads.o 2021-05-18T14:28:19.5729874Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMeans2.c -o rowMeans2.o 2021-05-18T14:28:20.1230789Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMedians.c -o rowMedians.o 2021-05-18T14:28:20.9729000Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowOrderStats.c -o rowOrderStats.o 2021-05-18T14:28:21.3689784Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowRanges.c -o rowRanges.o 2021-05-18T14:28:22.8470412Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowRanksWithTies.c -o rowRanksWithTies.o 2021-05-18T14:28:34.3304715Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowSums2.c -o rowSums2.o 2021-05-18T14:28:34.8670059Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowVars.c -o rowVars.o 2021-05-18T14:28:35.4932362Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signTabulate.c -o signTabulate.o 2021-05-18T14:28:35.6110601Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sum2.c -o sum2.o 2021-05-18T14:28:35.7205863Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c validateIndices.c -o validateIndices.o 2021-05-18T14:28:35.9571673Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c weightedMean.c -o weightedMean.o 2021-05-18T14:28:36.1215186Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c weightedMedian.c -o weightedMedian.o 2021-05-18T14:28:36.5239097Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c x_OP_y.c -o x_OP_y.o 2021-05-18T14:29:27.4715983Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o matrixStats.so 000.init.o allocMatrix2.o anyMissing.o binCounts.o binMeans.o colCounts.o colOrderStats.o colRanges.o diff2.o indexByRow.o logSumExp.o mean2.o productExpSumLog.o psortKM.o rowCounts.o rowCummaxs.o rowCummins.o rowCumprods.o rowCumsums.o rowDiffs.o rowLogSumExp.o rowMads.o rowMeans2.o rowMedians.o rowOrderStats.o rowRanges.o rowRanksWithTies.o rowSums2.o rowVars.o signTabulate.o sum2.o validateIndices.o weightedMean.o weightedMedian.o x_OP_y.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:29:27.5598789Z installing to /home/runner/work/_temp/Library/00LOCK-matrixStats/00new/matrixStats/libs 2021-05-18T14:29:27.5728093Z ** R 2021-05-18T14:29:27.5935822Z ** inst 2021-05-18T14:29:27.5981417Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:29:28.9281026Z ** help 2021-05-18T14:29:29.0601646Z *** installing help indices 2021-05-18T14:29:29.1461436Z ** building package indices 2021-05-18T14:29:29.4025041Z ** installing vignettes 2021-05-18T14:29:29.4090933Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:29:29.5923297Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:29:29.6155091Z ** testing if installed package can be loaded from final location 2021-05-18T14:29:29.8088898Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:29:29.8109253Z * DONE (matrixStats) 2021-05-18T14:29:30.1783935Z * installing *source* package ‘R.oo’ ... 2021-05-18T14:29:30.1854049Z ** package ‘R.oo’ successfully unpacked and MD5 sums checked 2021-05-18T14:29:30.1855524Z ** using staged installation 2021-05-18T14:29:30.1984827Z ** R 2021-05-18T14:29:30.2296311Z ** inst 2021-05-18T14:29:30.2309962Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:29:32.9477036Z ** help 2021-05-18T14:29:33.4097242Z *** installing help indices 2021-05-18T14:29:33.7401850Z ** building package indices 2021-05-18T14:29:34.2000722Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:29:34.4056480Z ** testing if installed package can be loaded from final location 2021-05-18T14:29:34.6854412Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:29:34.6901253Z * DONE (R.oo) 2021-05-18T14:29:35.2057125Z * installing *source* package ‘R.utils’ ... 2021-05-18T14:29:35.2185468Z ** package ‘R.utils’ successfully unpacked and MD5 sums checked 2021-05-18T14:29:35.2186693Z ** using staged installation 2021-05-18T14:29:35.2325197Z ** R 2021-05-18T14:29:35.2986688Z ** inst 2021-05-18T14:29:35.2998294Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:29:41.1268433Z Warning in setGenericS3.default(name, export = exportGeneric, envir = envir, : 2021-05-18T14:29:41.1269989Z Renamed the preexisting function warnings to warnings.default, which was defined in environment base. 2021-05-18T14:29:41.1271695Z ** help 2021-05-18T14:29:41.9650018Z *** installing help indices 2021-05-18T14:29:42.4182266Z ** building package indices 2021-05-18T14:29:43.1201111Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:29:43.3601163Z ** testing if installed package can be loaded from final location 2021-05-18T14:29:43.7478286Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:29:43.7557574Z * DONE (R.utils) 2021-05-18T14:29:43.7695077Z 2021-05-18T14:29:43.7696041Z The downloaded source packages are in 2021-05-18T14:29:43.7697401Z ‘/tmp/RtmpO5jLnL/downloaded_packages’ 2021-05-18T14:29:43.9496375Z 2021-05-18T14:29:43.9536164Z checking for file ‘/tmp/RtmpO5jLnL/remotesd601405859b1/neuroconductor-neurobase-1d4b172/DESCRIPTION’ ... 2021-05-18T14:29:43.9537159Z 2021-05-18T14:29:43.9538408Z ✔ checking for file ‘/tmp/RtmpO5jLnL/remotesd601405859b1/neuroconductor-neurobase-1d4b172/DESCRIPTION’ 2021-05-18T14:29:43.9791954Z 2021-05-18T14:29:43.9792783Z 2021-05-18T14:29:43.9794081Z ─ preparing ‘neurobase’: 2021-05-18T14:29:43.9794577Z 2021-05-18T14:29:43.9795013Z 2021-05-18T14:29:43.9878670Z checking DESCRIPTION meta-information ... 2021-05-18T14:29:43.9899273Z 2021-05-18T14:29:43.9901145Z ✔ checking DESCRIPTION meta-information 2021-05-18T14:29:44.0699081Z 2021-05-18T14:29:44.0700166Z 2021-05-18T14:29:44.0710200Z 2021-05-18T14:29:44.0710825Z 2021-05-18T14:29:44.0711344Z 2021-05-18T14:29:44.0711787Z 2021-05-18T14:29:44.0716927Z checking for LF line-endings in source and make files and shell scripts 2021-05-18T14:29:44.0734899Z 2021-05-18T14:29:44.0736226Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-18T14:29:44.0752201Z 2021-05-18T14:29:44.0752799Z 2021-05-18T14:29:44.0757246Z 2021-05-18T14:29:44.0757736Z 2021-05-18T14:29:44.0841714Z 2021-05-18T14:29:44.0859234Z 2021-05-18T14:29:44.0860316Z ─ checking for empty or unneeded directories 2021-05-18T14:29:44.0876592Z ─ building ‘neurobase_1.30.1.tar.gz’ 2021-05-18T14:29:44.1538785Z 2021-05-18T14:29:44.1539770Z 2021-05-18T14:29:44.1540307Z 2021-05-18T14:29:44.1626330Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:29:44.1627524Z (as ‘lib’ is unspecified) 2021-05-18T14:29:44.4453031Z * installing *source* package ‘neurobase’ ... 2021-05-18T14:29:44.4454702Z ** using staged installation 2021-05-18T14:29:44.4625269Z ** R 2021-05-18T14:29:44.4821677Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:29:46.8670723Z ** help 2021-05-18T14:29:47.0274444Z *** installing help indices 2021-05-18T14:29:47.1366900Z ** building package indices 2021-05-18T14:29:47.4127655Z ** installing vignettes 2021-05-18T14:29:47.4183738Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:29:48.1082288Z ** testing if installed package can be loaded from final location 2021-05-18T14:29:48.8156803Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:29:48.8178674Z * DONE (neurobase) 2021-05-18T14:29:48.8339894Z Installing 16 packages: base64enc, tinytex, htmltools, rmarkdown, R.methodsS3, R.oo, bitops, RNifti, R.utils, matrixStats, abind, BiocManager, bookdown, BiocStyle, limma, pbapply 2021-05-18T14:29:48.8345519Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-18T14:29:48.8346437Z (as ‘lib’ is unspecified) 2021-05-18T14:30:03.2722108Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/base64enc_0.1-3.tar.gz' 2021-05-18T14:30:03.5918813Z Content type 'application/x-tar' length 7843 bytes 2021-05-18T14:30:03.5919982Z ================================================== 2021-05-18T14:30:03.5920772Z downloaded 7843 bytes 2021-05-18T14:30:03.5921350Z 2021-05-18T14:30:03.5958748Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tinytex_0.31.tar.gz' 2021-05-18T14:30:03.7632077Z Content type 'binary/octet-stream' length 29350 bytes (28 KB) 2021-05-18T14:30:03.7638434Z ================================================== 2021-05-18T14:30:03.7639208Z downloaded 28 KB 2021-05-18T14:30:03.7639951Z 2021-05-18T14:30:03.7676386Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/htmltools_0.5.1.1.tar.gz' 2021-05-18T14:30:03.9407573Z Content type 'binary/octet-stream' length 72110 bytes (70 KB) 2021-05-18T14:30:03.9475599Z ================================================== 2021-05-18T14:30:03.9476456Z downloaded 70 KB 2021-05-18T14:30:03.9476959Z 2021-05-18T14:30:03.9518455Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rmarkdown_2.8.tar.gz' 2021-05-18T14:30:04.1200645Z Content type 'binary/octet-stream' length 3236609 bytes (3.1 MB) 2021-05-18T14:30:04.1574841Z ================================================== 2021-05-18T14:30:04.1575717Z downloaded 3.1 MB 2021-05-18T14:30:04.1576235Z 2021-05-18T14:30:04.1620310Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.methodsS3_1.8.1.tar.gz' 2021-05-18T14:30:04.4300644Z Content type 'binary/octet-stream' length 23789 bytes (23 KB) 2021-05-18T14:30:04.4309727Z ================================================== 2021-05-18T14:30:04.4310203Z downloaded 23 KB 2021-05-18T14:30:04.4310504Z 2021-05-18T14:30:04.4350070Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.oo_1.24.0.tar.gz' 2021-05-18T14:30:04.7054013Z Content type 'binary/octet-stream' length 382199 bytes (373 KB) 2021-05-18T14:30:04.7263850Z ================================================== 2021-05-18T14:30:04.7264884Z downloaded 373 KB 2021-05-18T14:30:04.7265412Z 2021-05-18T14:30:04.7303291Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bitops_1.0-7.tar.gz' 2021-05-18T14:30:04.9085687Z Content type 'binary/octet-stream' length 10887 bytes (10 KB) 2021-05-18T14:30:04.9087414Z ================================================== 2021-05-18T14:30:04.9088264Z downloaded 10 KB 2021-05-18T14:30:04.9088756Z 2021-05-18T14:30:04.9121535Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/RNifti_1.3.1.tar.gz' 2021-05-18T14:30:05.0371093Z Error in download.file(url, destfile, method, mode = "wb", ...) : 2021-05-18T14:30:05.7647313Z cannot open URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/RNifti_1.3.1.tar.gz' 2021-05-18T14:30:05.7649435Z In addition: Warning message: 2021-05-18T14:30:05.7650345Z In download.file(url, destfile, method, mode = "wb", ...) : 2021-05-18T14:30:05.7652423Z cannot open URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/RNifti_1.3.1.tar.gz': HTTP status was '500 Internal Server Error' 2021-05-18T14:30:05.7654702Z Warning in download.packages(pkgs, destdir = tmpd, available = available, : 2021-05-18T14:30:05.7655918Z download of package ‘RNifti’ failed 2021-05-18T14:30:05.7657555Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.utils_2.10.1.tar.gz' 2021-05-18T14:30:05.7659135Z Content type 'binary/octet-stream' length 361740 bytes (353 KB) 2021-05-18T14:30:05.7659941Z ================================================== 2021-05-18T14:30:05.7660513Z downloaded 353 KB 2021-05-18T14:30:05.7660949Z 2021-05-18T14:30:05.7662442Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/matrixStats_0.58.0.tar.gz' 2021-05-18T14:30:05.7664079Z Content type 'binary/octet-stream' length 194842 bytes (190 KB) 2021-05-18T14:30:05.7664880Z ================================================== 2021-05-18T14:30:05.7665459Z downloaded 190 KB 2021-05-18T14:30:05.7665846Z 2021-05-18T14:30:05.7667293Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/abind_1.4-5.tar.gz' 2021-05-18T14:30:05.7837158Z Content type 'application/x-tar' length 21895 bytes (21 KB) 2021-05-18T14:30:05.7850852Z ================================================== 2021-05-18T14:30:05.7851602Z downloaded 21 KB 2021-05-18T14:30:05.7852023Z 2021-05-18T14:30:05.7888395Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/BiocManager_1.30.15.tar.gz' 2021-05-18T14:30:06.3755683Z Content type 'binary/octet-stream' length 261721 bytes (255 KB) 2021-05-18T14:30:06.3986652Z ================================================== 2021-05-18T14:30:06.3987297Z downloaded 255 KB 2021-05-18T14:30:06.3987600Z 2021-05-18T14:30:06.4032088Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bookdown_0.22.tar.gz' 2021-05-18T14:30:08.1113153Z Content type 'binary/octet-stream' length 876829 bytes (856 KB) 2021-05-18T14:30:08.1384092Z ================================================== 2021-05-18T14:30:08.1384886Z downloaded 856 KB 2021-05-18T14:30:08.1385277Z 2021-05-18T14:30:08.1422735Z trying URL 'https://bioconductor.org/packages/3.13/bioc/src/contrib/BiocStyle_2.19.2.tar.gz' 2021-05-18T14:30:08.2911387Z Content type 'application/x-gzip' length 755694 bytes (737 KB) 2021-05-18T14:30:08.4479884Z ================================================== 2021-05-18T14:30:08.4480501Z downloaded 737 KB 2021-05-18T14:30:08.4480825Z 2021-05-18T14:30:08.4512269Z trying URL 'https://bioconductor.org/packages/3.13/bioc/src/contrib/limma_3.47.15.tar.gz' 2021-05-18T14:30:08.5929892Z Content type 'application/x-gzip' length 1560060 bytes (1.5 MB) 2021-05-18T14:30:08.6237954Z ================================================== 2021-05-18T14:30:08.6238724Z downloaded 1.5 MB 2021-05-18T14:30:08.6239231Z 2021-05-18T14:30:08.6268506Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pbapply_1.4-3.tar.gz' 2021-05-18T14:30:09.2226612Z Content type 'binary/octet-stream' length 16861 bytes (16 KB) 2021-05-18T14:30:09.2227350Z ================================================== 2021-05-18T14:30:09.2227828Z downloaded 16 KB 2021-05-18T14:30:09.2228140Z 2021-05-18T14:30:09.4243221Z * installing *source* package ‘base64enc’ ... 2021-05-18T14:30:09.4251249Z ** package ‘base64enc’ successfully unpacked and MD5 sums checked 2021-05-18T14:30:09.4281553Z ** using staged installation 2021-05-18T14:30:09.4387744Z ** libs 2021-05-18T14:30:09.4434689Z 2021-05-18T14:30:09.4436258Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-18T14:30:09.5499276Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c uriencode.c -o uriencode.o 2021-05-18T14:30:09.6234208Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-18T14:30:09.6946081Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o base64enc.so base64.o uriencode.o utf8.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:30:09.7165258Z installing to /home/runner/work/_temp/Library/00LOCK-base64enc/00new/base64enc/libs 2021-05-18T14:30:09.7180704Z ** R 2021-05-18T14:30:09.7209698Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:30:09.9694110Z ** help 2021-05-18T14:30:09.9923214Z *** installing help indices 2021-05-18T14:30:10.0086348Z ** building package indices 2021-05-18T14:30:10.1961320Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:30:10.3694439Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:30:10.3870631Z ** testing if installed package can be loaded from final location 2021-05-18T14:30:10.5571343Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:30:10.5576924Z * DONE (base64enc) 2021-05-18T14:30:10.7683629Z * installing *source* package ‘tinytex’ ... 2021-05-18T14:30:10.7695855Z ** package ‘tinytex’ successfully unpacked and MD5 sums checked 2021-05-18T14:30:10.7725861Z ** using staged installation 2021-05-18T14:30:10.7929215Z ** R 2021-05-18T14:30:10.7996999Z ** inst 2021-05-18T14:30:10.8004909Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:30:11.4845925Z ** help 2021-05-18T14:30:11.5158046Z *** installing help indices 2021-05-18T14:30:11.5424498Z ** building package indices 2021-05-18T14:30:11.7413316Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:30:11.9246995Z ** testing if installed package can be loaded from final location 2021-05-18T14:30:12.1173011Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:30:12.1181319Z * DONE (tinytex) 2021-05-18T14:30:12.3441027Z * installing *source* package ‘R.methodsS3’ ... 2021-05-18T14:30:12.3454523Z ** package ‘R.methodsS3’ successfully unpacked and MD5 sums checked 2021-05-18T14:30:12.3484749Z ** using staged installation 2021-05-18T14:30:12.3603421Z ** R 2021-05-18T14:30:12.3666713Z ** inst 2021-05-18T14:30:12.3674637Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:30:12.8280385Z ** help 2021-05-18T14:30:12.8642472Z *** installing help indices 2021-05-18T14:30:12.8985920Z ** building package indices 2021-05-18T14:30:13.1008500Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:30:13.2791085Z ** testing if installed package can be loaded from final location 2021-05-18T14:30:13.4580644Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:30:13.4589089Z * DONE (R.methodsS3) 2021-05-18T14:30:13.6568692Z * installing *source* package ‘bitops’ ... 2021-05-18T14:30:13.6577297Z ** package ‘bitops’ successfully unpacked and MD5 sums checked 2021-05-18T14:30:13.6607500Z ** using staged installation 2021-05-18T14:30:13.6698644Z ** libs 2021-05-18T14:30:13.6744732Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bit-ops.c -o bit-ops.o 2021-05-18T14:30:13.8494606Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cksum.c -o cksum.o 2021-05-18T14:30:13.9060739Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:30:13.9501615Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o bitops.so bit-ops.o cksum.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:30:13.9681300Z installing to /home/runner/work/_temp/Library/00LOCK-bitops/00new/bitops/libs 2021-05-18T14:30:13.9682430Z ** R 2021-05-18T14:30:13.9698157Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:30:14.1842615Z ** help 2021-05-18T14:30:14.2092316Z *** installing help indices 2021-05-18T14:30:14.2268311Z ** building package indices 2021-05-18T14:30:14.4111462Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:30:14.5847018Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:30:14.6019637Z ** testing if installed package can be loaded from final location 2021-05-18T14:30:14.7703064Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:30:14.7707943Z * DONE (bitops) 2021-05-18T14:30:15.1950434Z * installing *source* package ‘matrixStats’ ... 2021-05-18T14:30:15.2045584Z ** package ‘matrixStats’ successfully unpacked and MD5 sums checked 2021-05-18T14:30:15.2075353Z ** using staged installation 2021-05-18T14:30:15.2228133Z ** libs 2021-05-18T14:30:15.2289345Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c 000.init.c -o 000.init.o 2021-05-18T14:30:15.2694310Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c allocMatrix2.c -o allocMatrix2.o 2021-05-18T14:30:15.3484674Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c anyMissing.c -o anyMissing.o 2021-05-18T14:30:15.4482774Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c binCounts.c -o binCounts.o 2021-05-18T14:30:15.5396325Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c binMeans.c -o binMeans.o 2021-05-18T14:30:15.6715743Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colCounts.c -o colCounts.o 2021-05-18T14:30:16.9185810Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colOrderStats.c -o colOrderStats.o 2021-05-18T14:30:17.2585854Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colRanges.c -o colRanges.o 2021-05-18T14:30:18.6397394Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diff2.c -o diff2.o 2021-05-18T14:30:18.8403092Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c indexByRow.c -o indexByRow.o 2021-05-18T14:30:18.9010030Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c logSumExp.c -o logSumExp.o 2021-05-18T14:30:19.0920749Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mean2.c -o mean2.o 2021-05-18T14:30:19.2279128Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c productExpSumLog.c -o productExpSumLog.o 2021-05-18T14:30:19.3703530Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c psortKM.c -o psortKM.o 2021-05-18T14:30:19.4345129Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCounts.c -o rowCounts.o 2021-05-18T14:30:20.7642013Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCummaxs.c -o rowCummaxs.o 2021-05-18T14:30:21.7341587Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCummins.c -o rowCummins.o 2021-05-18T14:30:22.7119015Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCumprods.c -o rowCumprods.o 2021-05-18T14:30:23.5345425Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCumsums.c -o rowCumsums.o 2021-05-18T14:30:24.3548782Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowDiffs.c -o rowDiffs.o 2021-05-18T14:30:26.2545659Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowLogSumExp.c -o rowLogSumExp.o 2021-05-18T14:30:26.3830288Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMads.c -o rowMads.o 2021-05-18T14:30:27.3116656Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMeans2.c -o rowMeans2.o 2021-05-18T14:30:27.8629576Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMedians.c -o rowMedians.o 2021-05-18T14:30:28.7178474Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowOrderStats.c -o rowOrderStats.o 2021-05-18T14:30:29.1060990Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowRanges.c -o rowRanges.o 2021-05-18T14:30:31.2711488Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowRanksWithTies.c -o rowRanksWithTies.o 2021-05-18T14:30:41.9447956Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowSums2.c -o rowSums2.o 2021-05-18T14:30:42.4765823Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowVars.c -o rowVars.o 2021-05-18T14:30:43.0975596Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signTabulate.c -o signTabulate.o 2021-05-18T14:30:43.2143201Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sum2.c -o sum2.o 2021-05-18T14:30:43.3216071Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c validateIndices.c -o validateIndices.o 2021-05-18T14:30:43.5578115Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c weightedMean.c -o weightedMean.o 2021-05-18T14:30:43.7203718Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c weightedMedian.c -o weightedMedian.o 2021-05-18T14:30:44.1181648Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c x_OP_y.c -o x_OP_y.o 2021-05-18T14:31:34.9027279Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o matrixStats.so 000.init.o allocMatrix2.o anyMissing.o binCounts.o binMeans.o colCounts.o colOrderStats.o colRanges.o diff2.o indexByRow.o logSumExp.o mean2.o productExpSumLog.o psortKM.o rowCounts.o rowCummaxs.o rowCummins.o rowCumprods.o rowCumsums.o rowDiffs.o rowLogSumExp.o rowMads.o rowMeans2.o rowMedians.o rowOrderStats.o rowRanges.o rowRanksWithTies.o rowSums2.o rowVars.o signTabulate.o sum2.o validateIndices.o weightedMean.o weightedMedian.o x_OP_y.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:31:34.9904179Z installing to /home/runner/work/_temp/Library/00LOCK-matrixStats/00new/matrixStats/libs 2021-05-18T14:31:35.0032200Z ** R 2021-05-18T14:31:35.0242042Z ** inst 2021-05-18T14:31:35.0288567Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:31:36.3920423Z ** help 2021-05-18T14:31:36.5191271Z *** installing help indices 2021-05-18T14:31:36.6090310Z ** building package indices 2021-05-18T14:31:36.8665693Z ** installing vignettes 2021-05-18T14:31:36.8736017Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:31:37.0542658Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:31:37.0779265Z ** testing if installed package can be loaded from final location 2021-05-18T14:31:37.2777550Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:31:37.2778636Z * DONE (matrixStats) 2021-05-18T14:31:37.5030639Z * installing *source* package ‘abind’ ... 2021-05-18T14:31:37.5046630Z ** package ‘abind’ successfully unpacked and MD5 sums checked 2021-05-18T14:31:37.5078203Z ** using staged installation 2021-05-18T14:31:37.5189639Z ** R 2021-05-18T14:31:37.5238634Z ** inst 2021-05-18T14:31:37.5247215Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:31:38.0712928Z ** help 2021-05-18T14:31:38.0962973Z *** installing help indices 2021-05-18T14:31:38.1178667Z ** building package indices 2021-05-18T14:31:38.3149892Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:31:38.4900636Z ** testing if installed package can be loaded from final location 2021-05-18T14:31:38.6735475Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:31:38.6744085Z * DONE (abind) 2021-05-18T14:31:38.9218024Z * installing *source* package ‘BiocManager’ ... 2021-05-18T14:31:38.9245461Z ** package ‘BiocManager’ successfully unpacked and MD5 sums checked 2021-05-18T14:31:38.9246695Z ** using staged installation 2021-05-18T14:31:38.9368977Z ** R 2021-05-18T14:31:38.9434950Z ** inst 2021-05-18T14:31:38.9451583Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:31:39.5640362Z ** help 2021-05-18T14:31:39.5904382Z *** installing help indices 2021-05-18T14:31:39.6176542Z ** building package indices 2021-05-18T14:31:39.8136642Z ** installing vignettes 2021-05-18T14:31:39.8189408Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:31:40.1616052Z ** testing if installed package can be loaded from final location 2021-05-18T14:31:40.5112823Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:31:40.5122022Z * DONE (BiocManager) 2021-05-18T14:31:40.9537049Z * installing *source* package ‘limma’ ... 2021-05-18T14:31:40.9538511Z ** using staged installation 2021-05-18T14:31:40.9703624Z ** libs 2021-05-18T14:31:40.9751772Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:31:41.0202587Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c normexp.c -o normexp.o 2021-05-18T14:31:41.1593966Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c weighted_lowess.c -o weighted_lowess.o 2021-05-18T14:31:41.3259274Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o limma.so init.o normexp.o weighted_lowess.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:31:41.3481537Z installing to /home/runner/work/_temp/Library/00LOCK-limma/00new/limma/libs 2021-05-18T14:31:41.3495009Z ** R 2021-05-18T14:31:41.3881546Z ** inst 2021-05-18T14:31:41.3911952Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:31:50.0355320Z ** help 2021-05-18T14:31:50.7042654Z *** installing help indices 2021-05-18T14:31:51.0213451Z ** building package indices 2021-05-18T14:31:51.6170592Z ** installing vignettes 2021-05-18T14:31:51.6217457Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:31:51.9371460Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:31:51.9547904Z ** testing if installed package can be loaded from final location 2021-05-18T14:31:52.4571366Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:31:52.4650926Z * DONE (limma) 2021-05-18T14:31:52.6829666Z * installing *source* package ‘pbapply’ ... 2021-05-18T14:31:52.6840590Z ** package ‘pbapply’ successfully unpacked and MD5 sums checked 2021-05-18T14:31:52.6841667Z ** using staged installation 2021-05-18T14:31:52.6949719Z ** R 2021-05-18T14:31:52.7010147Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:31:53.3000405Z ** help 2021-05-18T14:31:53.3271117Z *** installing help indices 2021-05-18T14:31:53.3491907Z ** building package indices 2021-05-18T14:31:53.5462185Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:31:53.7250925Z ** testing if installed package can be loaded from final location 2021-05-18T14:31:53.9121065Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:31:53.9122582Z * DONE (pbapply) 2021-05-18T14:31:54.1554250Z * installing *source* package ‘htmltools’ ... 2021-05-18T14:31:54.1576046Z ** package ‘htmltools’ successfully unpacked and MD5 sums checked 2021-05-18T14:31:54.1606966Z ** using staged installation 2021-05-18T14:31:54.1762610Z ** libs 2021-05-18T14:31:54.1810407Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-18T14:31:54.2255633Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c template.c -o template.o 2021-05-18T14:31:54.3282156Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o htmltools.so init.o template.o -L/opt/R/devel/lib/R/lib -lR 2021-05-18T14:31:54.3502915Z installing to /home/runner/work/_temp/Library/00LOCK-htmltools/00new/htmltools/libs 2021-05-18T14:31:54.3515659Z ** R 2021-05-18T14:31:54.3642294Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:31:55.7837348Z ** help 2021-05-18T14:31:55.8621765Z *** installing help indices 2021-05-18T14:31:55.9187809Z ** building package indices 2021-05-18T14:31:56.1600650Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:31:56.3617318Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-18T14:31:56.3796925Z ** testing if installed package can be loaded from final location 2021-05-18T14:31:56.6013945Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:31:56.6028758Z * DONE (htmltools) 2021-05-18T14:31:56.9735485Z * installing *source* package ‘R.oo’ ... 2021-05-18T14:31:56.9806014Z ** package ‘R.oo’ successfully unpacked and MD5 sums checked 2021-05-18T14:31:56.9836003Z ** using staged installation 2021-05-18T14:31:56.9967749Z ** R 2021-05-18T14:31:57.0282450Z ** inst 2021-05-18T14:31:57.0297627Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:31:59.8106227Z ** help 2021-05-18T14:32:00.2834336Z *** installing help indices 2021-05-18T14:32:00.6377052Z ** building package indices 2021-05-18T14:32:01.1355023Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:32:01.3426187Z ** testing if installed package can be loaded from final location 2021-05-18T14:32:01.6320834Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:32:01.6321942Z * DONE (R.oo) 2021-05-18T14:32:02.4046310Z * installing *source* package ‘rmarkdown’ ... 2021-05-18T14:32:02.4326360Z ** package ‘rmarkdown’ successfully unpacked and MD5 sums checked 2021-05-18T14:32:02.4358713Z ** using staged installation 2021-05-18T14:32:02.4640127Z ** R 2021-05-18T14:32:02.5014096Z ** inst 2021-05-18T14:32:02.5234575Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:32:05.8872009Z ** help 2021-05-18T14:32:06.0770454Z *** installing help indices 2021-05-18T14:32:06.2336203Z *** copying figures 2021-05-18T14:32:06.2337931Z ** building package indices 2021-05-18T14:32:06.5225225Z ** installing vignettes 2021-05-18T14:32:06.5303071Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:32:06.7742957Z ** testing if installed package can be loaded from final location 2021-05-18T14:32:07.0749737Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:32:07.0807234Z * DONE (rmarkdown) 2021-05-18T14:32:07.6105385Z * installing *source* package ‘R.utils’ ... 2021-05-18T14:32:07.6235835Z ** package ‘R.utils’ successfully unpacked and MD5 sums checked 2021-05-18T14:32:07.6265799Z ** using staged installation 2021-05-18T14:32:07.6408955Z ** R 2021-05-18T14:32:07.7080889Z ** inst 2021-05-18T14:32:07.7093233Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:32:13.5713196Z Warning in setGenericS3.default(name, export = exportGeneric, envir = envir, : 2021-05-18T14:32:13.5714952Z Renamed the preexisting function warnings to warnings.default, which was defined in environment base. 2021-05-18T14:32:13.5716656Z ** help 2021-05-18T14:32:14.4320150Z *** installing help indices 2021-05-18T14:32:14.8977232Z ** building package indices 2021-05-18T14:32:15.6278485Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:32:15.8718693Z ** testing if installed package can be loaded from final location 2021-05-18T14:32:16.2676911Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:32:16.2753379Z * DONE (R.utils) 2021-05-18T14:32:16.6254344Z * installing *source* package ‘bookdown’ ... 2021-05-18T14:32:16.6321046Z ** package ‘bookdown’ successfully unpacked and MD5 sums checked 2021-05-18T14:32:16.6322460Z ** using staged installation 2021-05-18T14:32:16.6567384Z ** R 2021-05-18T14:32:16.6730788Z ** inst 2021-05-18T14:32:16.6789547Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:32:18.5118373Z ** help 2021-05-18T14:32:18.5625203Z *** installing help indices 2021-05-18T14:32:18.5986436Z *** copying figures 2021-05-18T14:32:18.5988057Z ** building package indices 2021-05-18T14:32:18.8089984Z ** installing vignettes 2021-05-18T14:32:18.8151371Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:32:19.0210514Z ** testing if installed package can be loaded from final location 2021-05-18T14:32:19.2557795Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:32:19.2586617Z * DONE (bookdown) 2021-05-18T14:32:19.5656419Z * installing *source* package ‘BiocStyle’ ... 2021-05-18T14:32:19.5657922Z ** using staged installation 2021-05-18T14:32:19.5806585Z ** R 2021-05-18T14:32:19.5885182Z ** inst 2021-05-18T14:32:19.5932563Z ** byte-compile and prepare package for lazy loading 2021-05-18T14:32:20.3492967Z ** help 2021-05-18T14:32:20.3807884Z *** installing help indices 2021-05-18T14:32:20.4062170Z ** building package indices 2021-05-18T14:32:20.6055233Z ** installing vignettes 2021-05-18T14:32:20.6119257Z ** testing if installed package can be loaded from temporary location 2021-05-18T14:32:20.8673377Z ** testing if installed package can be loaded from final location 2021-05-18T14:32:21.1280038Z ** testing if installed package keeps a record of temporary installation path 2021-05-18T14:32:21.1294717Z * DONE (BiocStyle) 2021-05-18T14:32:21.1392074Z 2021-05-18T14:32:21.1393202Z The downloaded source packages are in 2021-05-18T14:32:21.1394698Z ‘/tmp/RtmpO5jLnL/downloaded_packages’ 2021-05-18T14:32:21.2673610Z Skipping install of 'RAVELData' from a github remote, the SHA1 (253a47f2) has not changed since last install. 2021-05-18T14:32:21.2675247Z Use `force = TRUE` to force installation 2021-05-18T14:32:21.3439233Z Skipping install of 'oro.nifti' from a github remote, the SHA1 (bd06b05d) has not changed since last install. 2021-05-18T14:32:21.3441194Z Use `force = TRUE` to force installation 2021-05-18T14:32:21.4190536Z Skipping install of 'EveTemplate' from a github remote, the SHA1 (9f904f84) has not changed since last install. 2021-05-18T14:32:21.4191536Z Use `force = TRUE` to force installation 2021-05-18T14:32:21.5117354Z Skipping install of 'WhiteStripe' from a github remote, the SHA1 (2642ac54) has not changed since last install. 2021-05-18T14:32:21.5118395Z Use `force = TRUE` to force installation 2021-05-18T14:32:21.6498770Z Skipping install of 'neurobase' from a github remote, the SHA1 (1d4b1729) has not changed since last install. 2021-05-18T14:32:21.6499756Z Use `force = TRUE` to force installation 2021-05-18T14:32:35.0693701Z Skipping install of 'rcmdcheck' from a cran remote, the SHA1 (1.3.3) has not changed since last install. 2021-05-18T14:32:35.0694675Z Use `force = TRUE` to force installation 2021-05-18T14:32:35.0705118Z Skipping install of 'markdown' from a cran remote, the SHA1 (1.1) has not changed since last install. 2021-05-18T14:32:35.0706029Z Use `force = TRUE` to force installation 2021-05-18T14:32:35.0954775Z ##[group]Run options(width = 100) 2021-05-18T14:32:35.0955354Z options(width = 100) 2021-05-18T14:32:35.0955974Z pkgs <- installed.packages()[, "Package"] 2021-05-18T14:32:35.0956740Z sessioninfo::session_info(pkgs, include_base = TRUE) 2021-05-18T14:32:35.0965182Z shell: /usr/local/bin/Rscript {0} 2021-05-18T14:32:35.0965652Z env: 2021-05-18T14:32:35.0966120Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:32:35.0966639Z TIC_DEPLOY_KEY: 2021-05-18T14:32:35.0967507Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:32:35.0969339Z GITHUB_PAT: *** 2021-05-18T14:32:35.0970317Z COVERALLS_TOKEN: *** 2021-05-18T14:32:35.0970857Z continue-on-error: true 2021-05-18T14:32:35.0971363Z VDIFFR_RUN_TESTS: 2021-05-18T14:32:35.0971892Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:32:35.0972363Z TZ: UTC 2021-05-18T14:32:35.0972796Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:32:35.0973292Z NOT_CRAN: true 2021-05-18T14:32:35.0973702Z ##[endgroup] 2021-05-18T14:32:35.5538549Z ─ Session info ─────────────────────────────────────────────────────────────────────────────────── 2021-05-18T14:32:35.5539286Z setting value 2021-05-18T14:32:35.5540661Z version R Under development (unstable) (2021-05-16 r80304) 2021-05-18T14:32:35.5541380Z os Ubuntu 20.04.2 LTS 2021-05-18T14:32:35.5542200Z system x86_64, linux-gnu 2021-05-18T14:32:35.5542799Z ui X11 2021-05-18T14:32:35.5543392Z language (EN) 2021-05-18T14:32:35.5544195Z collate C.UTF-8 2021-05-18T14:32:35.5544972Z ctype C.UTF-8 2021-05-18T14:32:35.5545576Z tz UTC 2021-05-18T14:32:35.5546352Z date 2021-05-18 2021-05-18T14:32:35.5546659Z 2021-05-18T14:32:35.5547586Z ─ Packages ─────────────────────────────────────────────────────────────────────────────────────── 2021-05-18T14:32:35.5548398Z package * version date lib source 2021-05-18T14:32:35.5549362Z abind 1.4-5 2016-07-21 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5550369Z aghast 0.2.1 2021-05-18 [1] Github (muschellij2/aghast@0c3b853) 2021-05-18T14:32:35.5551376Z askpass 1.1 2019-01-13 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5552261Z base * 4.2.0 2021-05-17 [2] local 2021-05-18T14:32:35.5553179Z base64enc 0.1-3 2015-07-28 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5554140Z BiocManager 1.30.15 2021-05-11 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5555135Z BiocStyle 2.19.2 2021-03-28 [1] Bioconductor 2021-05-18T14:32:35.5556111Z bitops 1.0-7 2021-04-24 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5557036Z bookdown 0.22 2021-04-22 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5557982Z boot 1.3-28 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-18T14:32:35.5558869Z brew 1.0-6 2011-04-13 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5559946Z brio 1.1.2 2021-04-23 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5560843Z cachem 1.0.5 2021-05-15 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5561738Z callr 3.7.0 2021-04-20 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5562608Z class 7.3-19 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-18T14:32:35.5563698Z cli 2.5.0 2021-04-26 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5564607Z clipr 0.7.1 2020-10-08 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5565503Z cluster 2.1.2 2021-04-17 [2] CRAN (R 4.2.0) 2021-05-18T14:32:35.5566424Z codetools 0.2-18 2020-11-04 [2] CRAN (R 4.2.0) 2021-05-18T14:32:35.5567366Z commonmark 1.7 2018-12-01 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5568277Z compiler 4.2.0 2021-05-17 [2] local 2021-05-18T14:32:35.5569175Z covr 3.5.1 2020-09-16 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5570073Z cpp11 0.2.7 2021-03-29 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5570951Z crayon 1.4.1 2021-02-08 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5571895Z credentials 1.3.0 2020-07-21 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5572888Z curl 4.3.1 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5573752Z datasets * 4.2.0 2021-05-17 [2] local 2021-05-18T14:32:35.5574555Z debugme 1.1.0 2017-10-22 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5575427Z desc 1.2.0.9000 2021-05-18 [1] Github (muschellij2/desc@7be86f2) 2021-05-18T14:32:35.5576303Z devtools 2.4.1 2021-05-05 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5577103Z diffobj 0.3.4 2021-03-22 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5577878Z digest 0.6.27 2020-10-24 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5578666Z dplyr 1.0.6 2021-05-05 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5579461Z ellipsis 0.3.2 2021-04-29 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5580269Z evaluate 0.14 2019-05-28 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5581243Z EveTemplate 1.0.0 2021-05-18 [1] Github (neuroconductor/EveTemplate@9f904f8) 2021-05-18T14:32:35.5582194Z fansi 0.4.2 2021-01-15 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5582971Z fastmap 1.1.0 2021-01-25 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5583768Z foreign 0.8-81 2020-12-22 [2] CRAN (R 4.2.0) 2021-05-18T14:32:35.5584543Z fs 1.5.0 2020-07-31 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5585309Z generics 0.1.0 2020-10-31 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5586102Z gert 1.3.0 2021-03-29 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5586871Z gh 1.3.0 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5587732Z ghtravis 0.15.1 2021-05-18 [1] Github (muschellij2/ghtravis@0b26809) 2021-05-18T14:32:35.5588616Z git2r 0.28.0 2021-01-10 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5589406Z gitcreds 0.1.1 2020-12-04 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5590174Z glue 1.4.2 2020-08-27 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5590960Z graphics * 4.2.0 2021-05-17 [2] local 2021-05-18T14:32:35.5591771Z grDevices * 4.2.0 2021-05-17 [2] local 2021-05-18T14:32:35.5592547Z grid 4.2.0 2021-05-17 [2] local 2021-05-18T14:32:35.5593407Z highr 0.9 2021-04-16 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5594201Z htmltools 0.5.1.1 2021-01-22 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5594985Z httr 1.4.2 2020-07-20 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5595756Z ini 0.3.1 2018-05-20 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5596522Z jsonlite 1.7.2 2020-12-09 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5597343Z KernSmooth 2.23-20 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-18T14:32:35.5598146Z knitr 1.33 2021-04-24 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5598915Z lattice 0.20-44 2021-05-02 [2] CRAN (R 4.2.0) 2021-05-18T14:32:35.5599826Z lazyeval 0.2.2 2019-03-15 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5600663Z lifecycle 1.0.0 2021-02-15 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5601482Z limma 3.47.15 2021-05-10 [1] Bioconductor 2021-05-18T14:32:35.5602306Z magrittr 2.0.1 2020-11-17 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5603218Z markdown 1.1 2019-08-07 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5603986Z MASS 7.3-54 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-18T14:32:35.5604766Z Matrix 1.3-3 2021-05-04 [2] CRAN (R 4.2.0) 2021-05-18T14:32:35.5606897Z matrixStats 0.58.0 2021-01-29 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5607770Z memoise 2.0.0 2021-01-26 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5608573Z methods * 4.2.0 2021-05-17 [2] local 2021-05-18T14:32:35.5609359Z mgcv 1.8-35 2021-04-18 [2] CRAN (R 4.2.0) 2021-05-18T14:32:35.5610121Z mime 0.10 2021-02-13 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5611032Z neurobase 1.30.1 2021-05-18 [1] Github (neuroconductor/neurobase@1d4b172) 2021-05-18T14:32:35.5611938Z nlme 3.1-152 2021-02-04 [2] CRAN (R 4.2.0) 2021-05-18T14:32:35.5612712Z nnet 7.3-16 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-18T14:32:35.5613497Z openssl 1.4.4 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5614399Z oro.nifti 0.10.3 2021-05-18 [1] Github (neuroconductor/oro.nifti@bd06b05) 2021-05-18T14:32:35.5615319Z parallel 4.2.0 2021-05-17 [2] local 2021-05-18T14:32:35.5616138Z pbapply 1.4-3 2020-08-18 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5616924Z pillar 1.6.1 2021-05-16 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5617726Z pkgbuild 1.2.0 2020-12-15 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5618536Z pkgconfig 2.0.3 2019-09-22 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5619333Z pkgload 1.2.1 2021-04-06 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5620132Z praise 1.0.0 2015-08-11 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5620948Z prettyunits 1.1.1 2020-01-24 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5621757Z processx 3.5.2 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5622547Z ps 1.6.0 2021-02-28 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5623319Z purrr 0.3.4 2020-04-17 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5624200Z R.methodsS3 1.8.1 2020-08-26 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5625015Z R.oo 1.24.0 2020-08-26 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5625781Z R.utils 2.10.1 2020-08-26 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5626539Z R6 2.5.0 2020-10-28 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5627324Z rappdirs 0.3.3 2021-01-31 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5628230Z RAVELData 0.99.1 2021-05-18 [1] Github (neuroconductor/RAVELData@253a47f) 2021-05-18T14:32:35.5629154Z rcmdcheck 1.3.3 2019-05-07 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5629949Z Rcpp 1.0.6 2021-01-15 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5630722Z rematch2 2.1.2 2020-05-01 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5631523Z remotes 2.3.0 2021-04-01 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5632305Z rex 1.2.0 2020-04-21 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5633056Z rlang 0.4.11 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5633924Z rmarkdown 2.8 2021-05-07 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5634811Z RNifti 1.3.1 2021-05-18 [1] Github (neuroconductor/RNifti@929106d) 2021-05-18T14:32:35.5635674Z roxygen2 7.1.1 2020-06-27 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5636466Z rpart 4.1-15 2019-04-12 [2] CRAN (R 4.2.0) 2021-05-18T14:32:35.5637260Z rprojroot 2.0.2 2020-11-15 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5638064Z rstudioapi 0.13 2020-11-12 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5638873Z rticles 0.19 2021-03-04 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5639843Z rversions 2.0.2 2020-05-25 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5640664Z sessioninfo 1.1.1 2018-11-05 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5641488Z spatial 7.3-14 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-18T14:32:35.5642288Z splines 4.2.0 2021-05-17 [2] local 2021-05-18T14:32:35.5643054Z stats * 4.2.0 2021-05-17 [2] local 2021-05-18T14:32:35.5643834Z stats4 4.2.0 2021-05-17 [2] local 2021-05-18T14:32:35.5644602Z stringi 1.6.2 2021-05-17 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5645388Z stringr 1.4.0 2019-02-10 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5646191Z survival 3.2-11 2021-04-26 [2] CRAN (R 4.2.0) 2021-05-18T14:32:35.5646957Z sys 3.4 2020-07-23 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5647778Z sysreqs 1.0.0.9000 2021-05-18 [1] Github (r-hub/sysreqs@f068afa) 2021-05-18T14:32:35.5648610Z tcltk 4.2.0 2021-05-17 [2] local 2021-05-18T14:32:35.5649378Z testthat 3.0.2 2021-02-14 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5650167Z tibble 3.1.2 2021-05-16 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5650995Z tic 0.10.0 2021-05-18 [1] Github (ropensci/tic@3b4dfb8) 2021-05-18T14:32:35.5651804Z tidyr 1.1.3 2021-03-03 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5652606Z tidyselect 1.1.1 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5653509Z tinytex 0.31 2021-03-30 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5654295Z tools 4.2.0 2021-05-17 [2] local 2021-05-18T14:32:35.5655079Z usethis 2.0.1 2021-02-10 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5655870Z utf8 1.2.1 2021-03-12 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5656625Z utils * 4.2.0 2021-05-17 [2] local 2021-05-18T14:32:35.5657396Z vctrs 0.3.8 2021-04-29 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5658192Z waldo 0.2.5 2021-03-08 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5658975Z whisker 0.4 2019-08-28 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5659918Z WhiteStripe 2.3.2 2021-05-18 [1] Github (neuroconductor/WhiteStripe@2642ac5) 2021-05-18T14:32:35.5660844Z withr 2.4.2 2021-04-18 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5661624Z xfun 0.23 2021-05-15 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5662387Z xml2 1.3.2 2020-04-23 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5663245Z xopen 1.0.0 2018-09-17 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5664228Z yaml 2.2.1 2020-02-01 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5665073Z zip 2.1.1 2020-08-27 [1] RSPM (R 4.2.0) 2021-05-18T14:32:35.5665374Z 2021-05-18T14:32:35.5665817Z [1] /home/runner/work/_temp/Library 2021-05-18T14:32:35.5666349Z [2] /opt/R/devel/lib/R/library 2021-05-18T14:32:35.5697884Z ##[group]Run Rscript -e 'tic::script()' 2021-05-18T14:32:35.5698439Z Rscript -e 'tic::script()' 2021-05-18T14:32:35.5698840Z ls -l check 2021-05-18T14:32:35.5741768Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-05-18T14:32:35.5742260Z env: 2021-05-18T14:32:35.5742683Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:32:35.5743116Z TIC_DEPLOY_KEY: 2021-05-18T14:32:35.5743891Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:32:35.5745518Z GITHUB_PAT: *** 2021-05-18T14:32:35.5746266Z COVERALLS_TOKEN: *** 2021-05-18T14:32:35.5746733Z continue-on-error: true 2021-05-18T14:32:35.5747188Z VDIFFR_RUN_TESTS: 2021-05-18T14:32:35.5747635Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:32:35.5748059Z TZ: UTC 2021-05-18T14:32:35.5748420Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:32:35.5748812Z NOT_CRAN: true 2021-05-18T14:32:35.5749167Z ##[endgroup] 2021-05-18T14:32:35.8498348Z ✔ Loading tic stage configuration from tic.R 2021-05-18T14:32:35.9774716Z Running script: step_rcmdcheck(warnings_are_errors = NULL, notes_are_errors = NULL, 2021-05-18T14:32:35.9775821Z args = args, build_args = NULL, error_on = error_on, repos = repo_default(), 2021-05-18T14:32:35.9776591Z timeout = Inf, check_dir = "check") 2021-05-18T14:32:36.0402570Z ── R CMD build ───────────────────────────────────────────────────────────────── 2021-05-18T14:32:36.2504753Z * checking for file ‘.../DESCRIPTION’ ... OK 2021-05-18T14:32:36.2637840Z * preparing ‘RAVEL’: 2021-05-18T14:32:36.2688563Z * checking DESCRIPTION meta-information ... OK 2021-05-18T14:32:36.3543291Z * installing the package to build vignettes 2021-05-18T14:32:42.4827163Z * creating vignettes ... OK 2021-05-18T14:32:42.5076816Z * checking for LF line-endings in source and make files and shell scripts 2021-05-18T14:32:42.5086297Z * checking for empty or unneeded directories 2021-05-18T14:32:42.5092880Z Removed empty directory ‘RAVEL/images’ 2021-05-18T14:32:42.5120683Z * building ‘RAVEL_1.2.2.tar.gz’ 2021-05-18T14:32:42.5276861Z 2021-05-18T14:32:42.6657491Z ── R CMD check ───────────────────────────────────────────────────────────────── 2021-05-18T14:32:42.8750394Z * using log directory ‘/home/runner/work/RAVEL/RAVEL/check/RAVEL.Rcheck’ 2021-05-18T14:32:42.8751694Z * using R Under development (unstable) (2021-05-16 r80304) 2021-05-18T14:32:42.8752632Z * using platform: x86_64-pc-linux-gnu (64-bit) 2021-05-18T14:32:42.8753428Z * using session charset: UTF-8 2021-05-18T14:32:42.8962348Z * using option ‘--as-cran’ 2021-05-18T14:32:42.8992672Z * checking for file ‘RAVEL/DESCRIPTION’ ... OK 2021-05-18T14:32:42.8993763Z * this is package ‘RAVEL’ version ‘1.2.2’ 2021-05-18T14:32:42.8994740Z * package encoding: UTF-8 2021-05-18T14:32:42.9088522Z * checking package namespace information ... OK 2021-05-18T14:32:58.1955366Z * checking package dependencies ... OK 2021-05-18T14:32:58.1966231Z * checking if this is a source package ... OK 2021-05-18T14:32:58.1967235Z * checking if there is a namespace ... OK 2021-05-18T14:32:58.3818229Z * checking for executable files ... OK 2021-05-18T14:32:58.3830490Z * checking for hidden files and directories ... OK 2021-05-18T14:32:58.3831740Z * checking for portable file names ... OK 2021-05-18T14:32:58.3832758Z * checking for sufficient/correct file permissions ... OK 2021-05-18T14:32:58.3851113Z * checking serialization versions ... OK 2021-05-18T14:33:04.1748485Z * checking whether package ‘RAVEL’ can be installed ... OK 2021-05-18T14:33:04.1801285Z * checking installed package size ... OK 2021-05-18T14:33:04.2561341Z * checking package directory ... OK 2021-05-18T14:33:04.2567685Z * checking for future file timestamps ... OK 2021-05-18T14:33:04.2569295Z * checking ‘build’ directory ... OK 2021-05-18T14:33:04.4048349Z * checking DESCRIPTION meta-information ... OK 2021-05-18T14:33:04.4049607Z * checking top-level files ... OK 2021-05-18T14:33:04.4050525Z * checking for left-over files ... OK 2021-05-18T14:33:04.5652293Z * checking index information ... OK 2021-05-18T14:33:04.7858876Z * checking package subdirectories ... OK 2021-05-18T14:33:04.8315097Z * checking R files for non-ASCII characters ... OK 2021-05-18T14:33:04.8785680Z * checking R files for syntax errors ... OK 2021-05-18T14:33:06.5287194Z * checking whether the package can be loaded ... OK 2021-05-18T14:33:08.1641269Z * checking whether the package can be loaded with stated dependencies ... OK 2021-05-18T14:33:09.7988370Z * checking whether the package can be unloaded cleanly ... OK 2021-05-18T14:33:11.4267071Z * checking whether the namespace can be loaded with stated dependencies ... OK 2021-05-18T14:33:13.0879316Z * checking whether the namespace can be unloaded cleanly ... OK 2021-05-18T14:33:14.7795396Z * checking loading without being on the library search path ... OK 2021-05-18T14:33:16.4254973Z * checking dependencies in R code ... OK 2021-05-18T14:33:18.6360646Z * checking S3 generic/method consistency ... OK 2021-05-18T14:33:20.3521182Z * checking replacement functions ... OK 2021-05-18T14:33:22.0876771Z * checking foreign function calls ... OK 2021-05-18T14:33:30.3024006Z * checking R code for possible problems ... OK 2021-05-18T14:33:30.4944454Z * checking Rd files ... OK 2021-05-18T14:33:30.5400546Z * checking Rd metadata ... OK 2021-05-18T14:33:30.6007317Z * checking Rd line widths ... OK 2021-05-18T14:33:30.6980082Z * checking Rd cross-references ... OK 2021-05-18T14:33:32.3665420Z * checking for missing documentation entries ... OK 2021-05-18T14:33:37.5161216Z * checking for code/documentation mismatches ... OK 2021-05-18T14:33:39.8738121Z * checking Rd \usage sections ... OK 2021-05-18T14:33:39.9501157Z * checking Rd contents ... OK 2021-05-18T14:33:40.0271078Z * checking for unstated dependencies in examples ... OK 2021-05-18T14:33:40.0300678Z * checking contents of ‘data’ directory ... OK 2021-05-18T14:33:40.1982702Z * checking data for non-ASCII characters ... OK 2021-05-18T14:33:40.1990268Z * checking LazyData ... OK 2021-05-18T14:33:40.3687465Z * checking data for ASCII and uncompressed saves ... OK 2021-05-18T14:33:40.3733133Z * checking installed files from ‘inst/doc’ ... OK 2021-05-18T14:33:40.3763883Z * checking files in ‘vignettes’ ... OK 2021-05-18T14:33:47.2870604Z * checking examples ... OK 2021-05-18T14:33:47.4582791Z * checking for unstated dependencies in vignettes ... OK 2021-05-18T14:33:47.4613313Z * checking package vignettes in ‘inst/doc’ ... NOTE 2021-05-18T14:33:47.4624835Z Package vignette with placeholder title ‘Vignette Title’: 2021-05-18T14:33:47.4626046Z ‘ravel.Rmd’ 2021-05-18T14:33:47.9158844Z * checking re-building of vignette outputs ... OK 2021-05-18T14:33:49.5441615Z * checking PDF version of manual ... OK 2021-05-18T14:33:49.5443404Z * checking for non-standard things in the check directory ... OK 2021-05-18T14:33:49.5444355Z * checking for detritus in the temp directory ... OK 2021-05-18T14:33:49.5458191Z * DONE 2021-05-18T14:33:49.5458754Z 2021-05-18T14:33:49.5459258Z Status: 1 NOTE 2021-05-18T14:33:49.5459789Z See 2021-05-18T14:33:49.5461017Z ‘/home/runner/work/RAVEL/RAVEL/check/RAVEL.Rcheck/00check.log’ 2021-05-18T14:33:49.5461756Z for details. 2021-05-18T14:33:49.5462156Z 2021-05-18T14:33:49.5462507Z 2021-05-18T14:33:49.6329304Z ── R CMD check results ──────────────────────────────────────── RAVEL 1.2.2 ──── 2021-05-18T14:33:49.6346707Z Duration: 1m 7.1s 2021-05-18T14:33:49.6347243Z 2021-05-18T14:33:49.6370963Z ❯ checking package vignettes in ‘inst/doc’ ... NOTE 2021-05-18T14:33:49.6372280Z Package vignette with placeholder title ‘Vignette Title’: 2021-05-18T14:33:49.6373306Z ‘ravel.Rmd’ 2021-05-18T14:33:49.6373780Z 2021-05-18T14:33:49.6380610Z 0 errors ✔ | 0 warnings ✔ | 1 note ✖ 2021-05-18T14:33:49.6478255Z total 84 2021-05-18T14:33:49.6484197Z drwxr-xr-x 5 runner docker 4096 May 18 14:33 RAVEL.Rcheck 2021-05-18T14:33:49.6495141Z -rw-r--r-- 1 runner docker 22120 May 18 14:32 RAVEL_1.2.2.tar.gz 2021-05-18T14:33:49.6496510Z -rw-r--r-- 1 runner docker 54423 May 18 14:33 RAVEL_1.2.2_R_x86_64-pc-linux-gnu.tar.gz 2021-05-18T14:33:49.6527874Z ##[group]Run find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-05-18T14:33:49.6528611Z find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-05-18T14:33:49.6571883Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-05-18T14:33:49.6572371Z env: 2021-05-18T14:33:49.6572784Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:33:49.6573231Z TIC_DEPLOY_KEY: 2021-05-18T14:33:49.6573997Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:33:49.6575639Z GITHUB_PAT: *** 2021-05-18T14:33:49.6576403Z COVERALLS_TOKEN: *** 2021-05-18T14:33:49.6576868Z continue-on-error: true 2021-05-18T14:33:49.6577305Z VDIFFR_RUN_TESTS: 2021-05-18T14:33:49.6577766Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:33:49.6578191Z TZ: UTC 2021-05-18T14:33:49.6578545Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:33:49.6578942Z NOT_CRAN: true 2021-05-18T14:33:49.6579284Z ##[endgroup] 2021-05-18T14:33:49.6702504Z ##[group]Run Rscript -e "tic::before_deploy()" 2021-05-18T14:33:49.6703065Z Rscript -e "tic::before_deploy()" 2021-05-18T14:33:49.6745503Z shell: /usr/bin/bash -e {0} 2021-05-18T14:33:49.6745885Z env: 2021-05-18T14:33:49.6746301Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:33:49.6746751Z TIC_DEPLOY_KEY: 2021-05-18T14:33:49.6747520Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:33:49.6748767Z GITHUB_PAT: *** 2021-05-18T14:33:49.6749538Z COVERALLS_TOKEN: *** 2021-05-18T14:33:49.6750005Z continue-on-error: true 2021-05-18T14:33:49.6750444Z VDIFFR_RUN_TESTS: 2021-05-18T14:33:49.6750899Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:33:49.6751327Z TZ: UTC 2021-05-18T14:33:49.6751681Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:33:49.6752080Z NOT_CRAN: true 2021-05-18T14:33:49.6752425Z ##[endgroup] 2021-05-18T14:33:49.9451761Z ✔ Loading tic stage configuration from tic.R 2021-05-18T14:33:50.0712239Z ##[group]Run actions/upload-release-asset@v1.0.1 2021-05-18T14:33:50.0712788Z with: 2021-05-18T14:33:50.0713564Z upload_url: https://uploads.github.com/repos/neuroconductor/RAVEL/releases/43144000/assets{?name,label} 2021-05-18T14:33:50.0714532Z asset_path: check/RAVEL_1.2.2_R_x86_64-pc-linux-gnu.tar.gz 2021-05-18T14:33:50.0715170Z asset_name: RAVEL_1.2.2_R_x86_64-pc-linux-gnu_R4.1.tar.gz 2021-05-18T14:33:50.0715798Z asset_content_type: application/octet-stream 2021-05-18T14:33:50.0716271Z env: 2021-05-18T14:33:50.0716813Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:33:50.0717261Z TIC_DEPLOY_KEY: 2021-05-18T14:33:50.0718010Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:33:50.0719691Z GITHUB_PAT: *** 2021-05-18T14:33:50.0720586Z COVERALLS_TOKEN: *** 2021-05-18T14:33:50.0721063Z continue-on-error: true 2021-05-18T14:33:50.0721502Z VDIFFR_RUN_TESTS: 2021-05-18T14:33:50.0722006Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:33:50.0722436Z TZ: UTC 2021-05-18T14:33:50.0722796Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:33:50.0723192Z NOT_CRAN: true 2021-05-18T14:33:50.0724025Z GITHUB_TOKEN: *** 2021-05-18T14:33:50.0724388Z ##[endgroup] 2021-05-18T14:33:50.5999304Z ##[group]Run Rscript -e "tic::deploy()" 2021-05-18T14:33:50.6000025Z Rscript -e "tic::deploy()" 2021-05-18T14:33:50.6055495Z shell: /usr/bin/bash -e {0} 2021-05-18T14:33:50.6055875Z env: 2021-05-18T14:33:50.6056290Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:33:50.6056757Z TIC_DEPLOY_KEY: 2021-05-18T14:33:50.6057510Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:33:50.6059169Z GITHUB_PAT: *** 2021-05-18T14:33:50.6059943Z COVERALLS_TOKEN: *** 2021-05-18T14:33:50.6060398Z continue-on-error: true 2021-05-18T14:33:50.6060852Z VDIFFR_RUN_TESTS: 2021-05-18T14:33:50.6061318Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:33:50.6061734Z TZ: UTC 2021-05-18T14:33:50.6062101Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:33:50.6062483Z NOT_CRAN: true 2021-05-18T14:33:50.6062846Z ##[endgroup] 2021-05-18T14:33:50.8791399Z ✔ Loading tic stage configuration from tic.R 2021-05-18T14:33:51.0013759Z ##[group]Run Rscript -e "tic::after_deploy()" 2021-05-18T14:33:51.0014352Z Rscript -e "tic::after_deploy()" 2021-05-18T14:33:51.0056653Z shell: /usr/bin/bash -e {0} 2021-05-18T14:33:51.0057037Z env: 2021-05-18T14:33:51.0057449Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-18T14:33:51.0057929Z TIC_DEPLOY_KEY: 2021-05-18T14:33:51.0058683Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-18T14:33:51.0060149Z GITHUB_PAT: *** 2021-05-18T14:33:51.0060915Z COVERALLS_TOKEN: *** 2021-05-18T14:33:51.0061387Z continue-on-error: true 2021-05-18T14:33:51.0061831Z VDIFFR_RUN_TESTS: 2021-05-18T14:33:51.0062290Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-18T14:33:51.0062703Z TZ: UTC 2021-05-18T14:33:51.0063076Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-18T14:33:51.0063470Z NOT_CRAN: true 2021-05-18T14:33:51.0063839Z ##[endgroup] 2021-05-18T14:33:51.2746666Z ✔ Loading tic stage configuration from tic.R 2021-05-18T14:33:52.4306907Z Post job cleanup. 2021-05-18T14:33:52.4739477Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-05-18T14:33:52.4830067Z Post job cleanup. 2021-05-18T14:33:52.5780579Z [command]/usr/bin/git version 2021-05-18T14:33:52.5837358Z git version 2.31.1 2021-05-18T14:33:52.5869578Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-05-18T14:33:52.5918335Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-05-18T14:33:52.6152885Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-05-18T14:33:52.6194420Z http.https://github.com/.extraheader 2021-05-18T14:33:52.6206058Z [command]/usr/bin/git config --local --unset-all http.https://github.com/.extraheader 2021-05-18T14:33:52.6253725Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-05-18T14:33:52.6553179Z Cleaning up orphan processes