2021-05-16T17:30:50.7395684Z ##[section]Starting: Request a runner to run this job 2021-05-16T17:30:51.1699428Z Can't find any online and idle self-hosted runner in current repository that matches the required labels: 'ubuntu-20.04' 2021-05-16T17:30:51.2308968Z Can't find any online and idle self-hosted runner in current repository's organization/enterprise account that matches the required labels: 'ubuntu-20.04' 2021-05-16T17:30:51.3039376Z Found online and idle hosted runner in current repository's enterprise account that matches the required labels: 'ubuntu-20.04' 2021-05-16T17:30:51.4248731Z ##[section]Finishing: Request a runner to run this job 2021-05-16T17:30:57.1050324Z Current runner version: '2.278.0' 2021-05-16T17:30:57.1074419Z ##[group]Operating System 2021-05-16T17:30:57.1075285Z Ubuntu 2021-05-16T17:30:57.1075742Z 20.04.2 2021-05-16T17:30:57.1076130Z LTS 2021-05-16T17:30:57.1076620Z ##[endgroup] 2021-05-16T17:30:57.1077144Z ##[group]Virtual Environment 2021-05-16T17:30:57.1077793Z Environment: ubuntu-20.04 2021-05-16T17:30:57.1078301Z Version: 20210510.0 2021-05-16T17:30:57.1079274Z Included Software: https://github.com/actions/virtual-environments/blob/ubuntu20/20210510.0/images/linux/Ubuntu2004-README.md 2021-05-16T17:30:57.1080543Z Image Release: https://github.com/actions/virtual-environments/releases/tag/ubuntu20%2F20210510.0 2021-05-16T17:30:57.1081416Z ##[endgroup] 2021-05-16T17:30:57.1083200Z ##[group]GITHUB_TOKEN Permissions 2021-05-16T17:30:57.1084346Z Actions: write 2021-05-16T17:30:57.1084832Z Checks: write 2021-05-16T17:30:57.1085363Z Contents: write 2021-05-16T17:30:57.1085856Z Deployments: write 2021-05-16T17:30:57.1086476Z Issues: write 2021-05-16T17:30:57.1086996Z Metadata: read 2021-05-16T17:30:57.1087531Z Packages: write 2021-05-16T17:30:57.1088035Z PullRequests: write 2021-05-16T17:30:57.1088688Z RepositoryProjects: write 2021-05-16T17:30:57.1089283Z SecurityEvents: write 2021-05-16T17:30:57.1089840Z Statuses: write 2021-05-16T17:30:57.1090395Z ##[endgroup] 2021-05-16T17:30:57.1093156Z Prepare workflow directory 2021-05-16T17:30:57.2034112Z Prepare all required actions 2021-05-16T17:30:57.2044453Z Getting action download info 2021-05-16T17:30:57.5744385Z Download action repository 'actions/checkout@v2' 2021-05-16T17:30:59.2983233Z Download action repository 'r-lib/actions@master' 2021-05-16T17:31:00.1003873Z Download action repository 'adigherman/actions@master' 2021-05-16T17:31:02.3125668Z Download action repository 'msys2/setup-msys2@v2' 2021-05-16T17:31:02.6546585Z Download action repository 'actions/cache@v1' 2021-05-16T17:31:02.8236309Z Download action repository 'actions/upload-artifact@master' 2021-05-16T17:31:03.0058253Z Download action repository 'actions/upload-release-asset@v1.0.1' 2021-05-16T17:31:03.3093624Z ##[group]Run actions/checkout@v2 2021-05-16T17:31:03.3094327Z with: 2021-05-16T17:31:03.3094774Z repository: neuroconductor/brainR 2021-05-16T17:31:03.3095654Z token: *** 2021-05-16T17:31:03.3096025Z ssh-strict: true 2021-05-16T17:31:03.3096496Z persist-credentials: true 2021-05-16T17:31:03.3096928Z clean: true 2021-05-16T17:31:03.3097291Z fetch-depth: 1 2021-05-16T17:31:03.3097639Z lfs: false 2021-05-16T17:31:03.3097997Z submodules: false 2021-05-16T17:31:03.3098337Z env: 2021-05-16T17:31:03.3098746Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:31:03.3099173Z TIC_DEPLOY_KEY: 2021-05-16T17:31:03.3099923Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:31:03.3101036Z GITHUB_PAT: *** 2021-05-16T17:31:03.3101400Z COVERALLS_TOKEN: 2021-05-16T17:31:03.3101851Z continue-on-error: true 2021-05-16T17:31:03.3102275Z VDIFFR_RUN_TESTS: 2021-05-16T17:31:03.3102643Z ##[endgroup] 2021-05-16T17:31:03.5365957Z Syncing repository: neuroconductor/brainR 2021-05-16T17:31:03.5366742Z ##[group]Getting Git version info 2021-05-16T17:31:03.5367787Z Working directory is '/home/runner/work/brainR/brainR' 2021-05-16T17:31:03.5368359Z [command]/usr/bin/git version 2021-05-16T17:31:03.5479083Z git version 2.31.1 2021-05-16T17:31:03.5498463Z ##[endgroup] 2021-05-16T17:31:03.5503674Z Deleting the contents of '/home/runner/work/brainR/brainR' 2021-05-16T17:31:03.5509208Z ##[group]Initializing the repository 2021-05-16T17:31:03.5511156Z [command]/usr/bin/git init /home/runner/work/brainR/brainR 2021-05-16T17:31:03.5582157Z hint: Using 'master' as the name for the initial branch. This default branch name 2021-05-16T17:31:03.5582950Z hint: is subject to change. To configure the initial branch name to use in all 2021-05-16T17:31:03.5583764Z hint: of your new repositories, which will suppress this warning, call: 2021-05-16T17:31:03.5584291Z hint: 2021-05-16T17:31:03.5584956Z hint: git config --global init.defaultBranch 2021-05-16T17:31:03.5585593Z hint: 2021-05-16T17:31:03.5586268Z hint: Names commonly chosen instead of 'master' are 'main', 'trunk' and 2021-05-16T17:31:03.5587167Z hint: 'development'. The just-created branch can be renamed via this command: 2021-05-16T17:31:03.5587713Z hint: 2021-05-16T17:31:03.5588178Z hint: git branch -m 2021-05-16T17:31:03.5596571Z Initialized empty Git repository in /home/runner/work/brainR/brainR/.git/ 2021-05-16T17:31:03.5606226Z [command]/usr/bin/git remote add origin https://github.com/neuroconductor/brainR 2021-05-16T17:31:03.5651365Z ##[endgroup] 2021-05-16T17:31:03.5652497Z ##[group]Disabling automatic garbage collection 2021-05-16T17:31:03.5659138Z [command]/usr/bin/git config --local gc.auto 0 2021-05-16T17:31:03.5706572Z ##[endgroup] 2021-05-16T17:31:03.5714463Z ##[group]Setting up auth 2021-05-16T17:31:03.5721828Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-05-16T17:31:03.5758979Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-05-16T17:31:03.6098637Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-05-16T17:31:03.6141873Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-05-16T17:31:03.6359630Z [command]/usr/bin/git config --local http.https://github.com/.extraheader AUTHORIZATION: basic *** 2021-05-16T17:31:04.1775662Z ##[endgroup] 2021-05-16T17:31:04.1795823Z ##[group]Fetching the repository 2021-05-16T17:31:04.1797807Z [command]/usr/bin/git -c protocol.version=2 fetch --no-tags --prune --progress --no-recurse-submodules --depth=1 origin +30deb980379774a44b6be4e1030c1faf4a0115bd:refs/tags/1.6.0.s 2021-05-16T17:31:04.1799053Z remote: Enumerating objects: 89, done. 2021-05-16T17:31:04.1799889Z remote: Counting objects: 1% (1/89) 2021-05-16T17:31:04.1800505Z remote: Counting objects: 2% (2/89) 2021-05-16T17:31:04.1801072Z remote: Counting objects: 3% (3/89) 2021-05-16T17:31:04.1801655Z remote: Counting objects: 4% (4/89) 2021-05-16T17:31:04.1802231Z remote: Counting objects: 5% (5/89) 2021-05-16T17:31:04.1802797Z remote: Counting objects: 6% (6/89) 2021-05-16T17:31:04.1803378Z remote: Counting objects: 7% (7/89) 2021-05-16T17:31:04.1803951Z remote: Counting objects: 8% (8/89) 2021-05-16T17:31:04.1804530Z remote: Counting objects: 10% (9/89) 2021-05-16T17:31:04.1805112Z remote: Counting objects: 11% (10/89) 2021-05-16T17:31:04.1805684Z remote: Counting objects: 12% (11/89) 2021-05-16T17:31:04.1806264Z remote: Counting objects: 13% (12/89) 2021-05-16T17:31:04.1806844Z remote: Counting objects: 14% (13/89) 2021-05-16T17:31:04.1807421Z remote: Counting objects: 15% (14/89) 2021-05-16T17:31:04.1807998Z remote: Counting objects: 16% (15/89) 2021-05-16T17:31:04.1808562Z remote: Counting objects: 17% (16/89) 2021-05-16T17:31:04.1809137Z remote: Counting objects: 19% (17/89) 2021-05-16T17:31:04.1809713Z remote: Counting objects: 20% (18/89) 2021-05-16T17:31:04.1810278Z remote: Counting objects: 21% (19/89) 2021-05-16T17:31:04.1810853Z remote: Counting objects: 22% (20/89) 2021-05-16T17:31:04.1811412Z remote: Counting objects: 23% (21/89) 2021-05-16T17:31:04.1811990Z remote: Counting objects: 24% (22/89) 2021-05-16T17:31:04.1812613Z remote: Counting objects: 25% (23/89) 2021-05-16T17:31:04.1813180Z remote: Counting objects: 26% (24/89) 2021-05-16T17:31:04.1813758Z remote: Counting objects: 28% (25/89) 2021-05-16T17:31:04.1815159Z remote: Counting objects: 29% (26/89) 2021-05-16T17:31:04.1815746Z remote: Counting objects: 30% (27/89) 2021-05-16T17:31:04.1816475Z remote: Counting objects: 31% (28/89) 2021-05-16T17:31:04.1817035Z remote: Counting objects: 32% (29/89) 2021-05-16T17:31:04.1817821Z remote: Counting objects: 33% (30/89) 2021-05-16T17:31:04.1818402Z remote: Counting objects: 34% (31/89) 2021-05-16T17:31:04.1818962Z remote: Counting objects: 35% (32/89) 2021-05-16T17:31:04.1819538Z remote: Counting objects: 37% (33/89) 2021-05-16T17:31:04.1820095Z remote: Counting objects: 38% (34/89) 2021-05-16T17:31:04.1820678Z remote: Counting objects: 39% (35/89) 2021-05-16T17:31:04.1821256Z remote: Counting objects: 40% (36/89) 2021-05-16T17:31:04.1821822Z remote: Counting objects: 41% (37/89) 2021-05-16T17:31:04.1822397Z remote: Counting objects: 42% (38/89) 2021-05-16T17:31:04.1822971Z remote: Counting objects: 43% (39/89) 2021-05-16T17:31:04.1823535Z remote: Counting objects: 44% (40/89) 2021-05-16T17:31:04.1824121Z remote: Counting objects: 46% (41/89) 2021-05-16T17:31:04.1824683Z remote: Counting objects: 47% (42/89) 2021-05-16T17:31:04.1825255Z remote: Counting objects: 48% (43/89) 2021-05-16T17:31:04.1825825Z remote: Counting objects: 49% (44/89) 2021-05-16T17:31:04.1826385Z remote: Counting objects: 50% (45/89) 2021-05-16T17:31:04.1826962Z remote: Counting objects: 51% (46/89) 2021-05-16T17:31:04.1827527Z remote: Counting objects: 52% (47/89) 2021-05-16T17:31:04.1828097Z remote: Counting objects: 53% (48/89) 2021-05-16T17:31:04.1828666Z remote: Counting objects: 55% (49/89) 2021-05-16T17:31:04.1829229Z remote: Counting objects: 56% (50/89) 2021-05-16T17:31:04.1829810Z remote: Counting objects: 57% (51/89) 2021-05-16T17:31:04.1830375Z remote: Counting objects: 58% (52/89) 2021-05-16T17:31:04.1830949Z remote: Counting objects: 59% (53/89) 2021-05-16T17:31:04.1831527Z remote: Counting objects: 60% (54/89) 2021-05-16T17:31:04.1832187Z remote: Counting objects: 61% (55/89) 2021-05-16T17:31:04.1832791Z remote: Counting objects: 62% (56/89) 2021-05-16T17:31:04.1833374Z remote: Counting objects: 64% (57/89) 2021-05-16T17:31:04.1833936Z remote: Counting objects: 65% (58/89) 2021-05-16T17:31:04.1834512Z remote: Counting objects: 66% (59/89) 2021-05-16T17:31:04.1835075Z remote: Counting objects: 67% (60/89) 2021-05-16T17:31:04.1835647Z remote: Counting objects: 68% (61/89) 2021-05-16T17:31:04.1836224Z remote: Counting objects: 69% (62/89) 2021-05-16T17:31:04.1836788Z remote: Counting objects: 70% (63/89) 2021-05-16T17:31:04.1837367Z remote: Counting objects: 71% (64/89) 2021-05-16T17:31:04.1837932Z remote: Counting objects: 73% (65/89) 2021-05-16T17:31:04.1838509Z remote: Counting objects: 74% (66/89) 2021-05-16T17:31:04.1839087Z remote: Counting objects: 75% (67/89) 2021-05-16T17:31:04.1839661Z remote: Counting objects: 76% (68/89) 2021-05-16T17:31:04.1840237Z remote: Counting objects: 77% (69/89) 2021-05-16T17:31:04.1840797Z remote: Counting objects: 78% (70/89) 2021-05-16T17:31:04.1841373Z remote: Counting objects: 79% (71/89) 2021-05-16T17:31:04.1841952Z remote: Counting objects: 80% (72/89) 2021-05-16T17:31:04.1842513Z remote: Counting objects: 82% (73/89) 2021-05-16T17:31:04.1843093Z remote: Counting objects: 83% (74/89) 2021-05-16T17:31:04.1843757Z remote: Counting objects: 84% (75/89) 2021-05-16T17:31:04.1844231Z remote: Counting objects: 85% (76/89) 2021-05-16T17:31:04.1844712Z remote: Counting objects: 86% (77/89) 2021-05-16T17:31:04.1845177Z remote: Counting objects: 87% (78/89) 2021-05-16T17:31:04.1845655Z remote: Counting objects: 88% (79/89) 2021-05-16T17:31:04.1846126Z remote: Counting objects: 89% (80/89) 2021-05-16T17:31:04.1846607Z remote: Counting objects: 91% (81/89) 2021-05-16T17:31:04.1847292Z remote: Counting objects: 92% (82/89) 2021-05-16T17:31:04.1847879Z remote: Counting objects: 93% (83/89) 2021-05-16T17:31:04.1848456Z remote: Counting objects: 94% (84/89) 2021-05-16T17:31:04.1849020Z remote: Counting objects: 95% (85/89) 2021-05-16T17:31:04.1849600Z remote: Counting objects: 96% (86/89) 2021-05-16T17:31:04.1850160Z remote: Counting objects: 97% (87/89) 2021-05-16T17:31:04.1850744Z remote: Counting objects: 98% (88/89) 2021-05-16T17:31:04.1851325Z remote: Counting objects: 100% (89/89) 2021-05-16T17:31:04.1851910Z remote: Counting objects: 100% (89/89), done. 2021-05-16T17:31:04.1852537Z remote: Compressing objects: 1% (1/66) 2021-05-16T17:31:04.1853165Z remote: Compressing objects: 3% (2/66) 2021-05-16T17:31:04.1853771Z remote: Compressing objects: 4% (3/66) 2021-05-16T17:31:04.1854666Z remote: Compressing objects: 6% (4/66) 2021-05-16T17:31:04.1855298Z remote: Compressing objects: 7% (5/66) 2021-05-16T17:31:04.1855902Z remote: Compressing objects: 9% (6/66) 2021-05-16T17:31:04.1856519Z remote: Compressing objects: 10% (7/66) 2021-05-16T17:31:04.1857126Z remote: Compressing objects: 12% (8/66) 2021-05-16T17:31:04.1857746Z remote: Compressing objects: 13% (9/66) 2021-05-16T17:31:04.1858373Z remote: Compressing objects: 15% (10/66) 2021-05-16T17:31:04.1858983Z remote: Compressing objects: 16% (11/66) 2021-05-16T17:31:04.1859603Z remote: Compressing objects: 18% (12/66) 2021-05-16T17:31:04.1860221Z remote: Compressing objects: 19% (13/66) 2021-05-16T17:31:04.1860830Z remote: Compressing objects: 21% (14/66) 2021-05-16T17:31:04.1861454Z remote: Compressing objects: 22% (15/66) 2021-05-16T17:31:04.1862066Z remote: Compressing objects: 24% (16/66) 2021-05-16T17:31:04.1862688Z remote: Compressing objects: 25% (17/66) 2021-05-16T17:31:04.1863403Z remote: Compressing objects: 27% (18/66) 2021-05-16T17:31:04.1864025Z remote: Compressing objects: 28% (19/66) 2021-05-16T17:31:04.1864648Z remote: Compressing objects: 30% (20/66) 2021-05-16T17:31:04.1865252Z remote: Compressing objects: 31% (21/66) 2021-05-16T17:31:04.1865868Z remote: Compressing objects: 33% (22/66) 2021-05-16T17:31:04.1866492Z remote: Compressing objects: 34% (23/66) 2021-05-16T17:31:04.1867100Z remote: Compressing objects: 36% (24/66) 2021-05-16T17:31:04.1867722Z remote: Compressing objects: 37% (25/66) 2021-05-16T17:31:04.1868343Z remote: Compressing objects: 39% (26/66) 2021-05-16T17:31:04.1868947Z remote: Compressing objects: 40% (27/66) 2021-05-16T17:31:04.1869563Z remote: Compressing objects: 42% (28/66) 2021-05-16T17:31:04.1870177Z remote: Compressing objects: 43% (29/66) 2021-05-16T17:31:04.1870799Z remote: Compressing objects: 45% (30/66) 2021-05-16T17:31:04.1871426Z remote: Compressing objects: 46% (31/66) 2021-05-16T17:31:04.1872327Z remote: Compressing objects: 48% (32/66) 2021-05-16T17:31:04.1872964Z remote: Compressing objects: 50% (33/66) 2021-05-16T17:31:04.1878028Z remote: Compressing objects: 51% (34/66) 2021-05-16T17:31:04.1878674Z remote: Compressing objects: 53% (35/66) 2021-05-16T17:31:04.1879303Z remote: Compressing objects: 54% (36/66) 2021-05-16T17:31:04.1879907Z remote: Compressing objects: 56% (37/66) 2021-05-16T17:31:04.1880533Z remote: Compressing objects: 57% (38/66) 2021-05-16T17:31:04.1881157Z remote: Compressing objects: 59% (39/66) 2021-05-16T17:31:04.1881761Z remote: Compressing objects: 60% (40/66) 2021-05-16T17:31:04.1882387Z remote: Compressing objects: 62% (41/66) 2021-05-16T17:31:04.1882992Z remote: Compressing objects: 63% (42/66) 2021-05-16T17:31:04.1883626Z remote: Compressing objects: 65% (43/66) 2021-05-16T17:31:04.1884382Z remote: Compressing objects: 66% (44/66) 2021-05-16T17:31:04.1884990Z remote: Compressing objects: 68% (45/66) 2021-05-16T17:31:04.1885610Z remote: Compressing objects: 69% (46/66) 2021-05-16T17:31:04.1886216Z remote: Compressing objects: 71% (47/66) 2021-05-16T17:31:04.1886833Z remote: Compressing objects: 72% (48/66) 2021-05-16T17:31:04.1887454Z remote: Compressing objects: 74% (49/66) 2021-05-16T17:31:04.1888068Z remote: Compressing objects: 75% (50/66) 2021-05-16T17:31:04.1888684Z remote: Compressing objects: 77% (51/66) 2021-05-16T17:31:04.1889297Z remote: Compressing objects: 78% (52/66) 2021-05-16T17:31:04.1889899Z remote: Compressing objects: 80% (53/66) 2021-05-16T17:31:04.1890517Z remote: Compressing objects: 81% (54/66) 2021-05-16T17:31:04.1891119Z remote: Compressing objects: 83% (55/66) 2021-05-16T17:31:04.1891749Z remote: Compressing objects: 84% (56/66) 2021-05-16T17:31:04.1892372Z remote: Compressing objects: 86% (57/66) 2021-05-16T17:31:04.1892972Z remote: Compressing objects: 87% (58/66) 2021-05-16T17:31:04.1893589Z remote: Compressing objects: 89% (59/66) 2021-05-16T17:31:04.1895493Z remote: Compressing objects: 90% (60/66) 2021-05-16T17:31:04.1896118Z remote: Compressing objects: 92% (61/66) 2021-05-16T17:31:04.1896743Z remote: Compressing objects: 93% (62/66) 2021-05-16T17:31:04.1897347Z remote: Compressing objects: 95% (63/66) 2021-05-16T17:31:04.1897966Z remote: Compressing objects: 96% (64/66) 2021-05-16T17:31:04.1898574Z remote: Compressing objects: 98% (65/66) 2021-05-16T17:31:04.1899189Z remote: Compressing objects: 100% (66/66) 2021-05-16T17:31:04.1899838Z remote: Compressing objects: 100% (66/66), done. 2021-05-16T17:31:04.1900920Z remote: Total 89 (delta 24), reused 62 (delta 20), pack-reused 0 2021-05-16T17:31:04.1901831Z From https://github.com/neuroconductor/brainR 2021-05-16T17:31:04.1902890Z * [new ref] 30deb980379774a44b6be4e1030c1faf4a0115bd -> 1.6.0.s 2021-05-16T17:31:04.1903606Z ##[endgroup] 2021-05-16T17:31:04.1904180Z ##[group]Determining the checkout info 2021-05-16T17:31:04.1904718Z ##[endgroup] 2021-05-16T17:31:04.1905224Z ##[group]Checking out the ref 2021-05-16T17:31:04.1906072Z [command]/usr/bin/git checkout --progress --force refs/tags/1.6.0.s 2021-05-16T17:31:04.1906882Z Note: switching to 'refs/tags/1.6.0.s'. 2021-05-16T17:31:04.1907290Z 2021-05-16T17:31:04.1908086Z You are in 'detached HEAD' state. You can look around, make experimental 2021-05-16T17:31:04.1908905Z changes and commit them, and you can discard any commits you make in this 2021-05-16T17:31:04.1909715Z state without impacting any branches by switching back to a branch. 2021-05-16T17:31:04.1910216Z 2021-05-16T17:31:04.1910783Z If you want to create a new branch to retain commits you create, you may 2021-05-16T17:31:04.1911729Z do so (now or later) by using -c with the switch command. Example: 2021-05-16T17:31:04.1912211Z 2021-05-16T17:31:04.1912887Z git switch -c 2021-05-16T17:31:04.1913293Z 2021-05-16T17:31:04.1913751Z Or undo this operation with: 2021-05-16T17:31:04.1914122Z 2021-05-16T17:31:04.1914634Z git switch - 2021-05-16T17:31:04.1914970Z 2021-05-16T17:31:04.1915572Z Turn off this advice by setting config variable advice.detachedHead to false 2021-05-16T17:31:04.1916153Z 2021-05-16T17:31:04.1916621Z HEAD is now at 30deb98 Version id 60 stable 2021-05-16T17:31:04.1917160Z ##[endgroup] 2021-05-16T17:31:04.1917838Z [command]/usr/bin/git log -1 --format='%H' 2021-05-16T17:31:04.1918665Z '30deb980379774a44b6be4e1030c1faf4a0115bd' 2021-05-16T17:31:04.1998036Z ##[group]Run r-lib/actions/setup-r@master 2021-05-16T17:31:04.1998478Z with: 2021-05-16T17:31:04.1998832Z r-version: devel 2021-05-16T17:31:04.1999169Z Ncpus: 1 2021-05-16T17:31:04.1999556Z crayon.enabled: NULL 2021-05-16T17:31:04.2000038Z remove-openmp-macos: true 2021-05-16T17:31:04.2000666Z http-user-agent: default 2021-05-16T17:31:04.2001087Z install-r: true 2021-05-16T17:31:04.2001622Z windows-path-include-mingw: true 2021-05-16T17:31:04.2002114Z env: 2021-05-16T17:31:04.2002520Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:31:04.2002945Z TIC_DEPLOY_KEY: 2021-05-16T17:31:04.2003700Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:31:04.2004906Z GITHUB_PAT: *** 2021-05-16T17:31:04.2005263Z COVERALLS_TOKEN: 2021-05-16T17:31:04.2005710Z continue-on-error: true 2021-05-16T17:31:04.2006135Z VDIFFR_RUN_TESTS: 2021-05-16T17:31:04.2006504Z ##[endgroup] 2021-05-16T17:31:06.8618827Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive add-apt-repository -y ppa:cran/travis 2021-05-16T17:31:08.4735215Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-05-16T17:31:08.4739434Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease [114 kB] 2021-05-16T17:31:08.4741768Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease [101 kB] 2021-05-16T17:31:08.4982846Z Get:4 http://security.ubuntu.com/ubuntu focal-security InRelease [109 kB] 2021-05-16T17:31:08.5107572Z Get:5 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease [10.5 kB] 2021-05-16T17:31:08.5428920Z Hit:6 https://download.mono-project.com/repo/ubuntu stable-focal InRelease 2021-05-16T17:31:08.6202656Z Hit:7 http://ppa.launchpad.net/apt-fast/stable/ubuntu focal InRelease 2021-05-16T17:31:08.6902041Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 Packages [983 kB] 2021-05-16T17:31:08.7124867Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main Translation-en [222 kB] 2021-05-16T17:31:08.7156909Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 c-n-f Metadata [13.3 kB] 2021-05-16T17:31:08.7158849Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted amd64 Packages [226 kB] 2021-05-16T17:31:08.7197911Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted Translation-en [33.3 kB] 2021-05-16T17:31:08.7228076Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 Packages [774 kB] 2021-05-16T17:31:08.7281944Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe Translation-en [166 kB] 2021-05-16T17:31:08.7385327Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 c-n-f Metadata [17.4 kB] 2021-05-16T17:31:08.7785623Z Get:16 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease [18.0 kB] 2021-05-16T17:31:08.8993369Z Get:17 https://packages.microsoft.com/ubuntu/20.04/prod focal/main amd64 Packages [73.2 kB] 2021-05-16T17:31:09.0215644Z Hit:18 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-05-16T17:31:09.0877972Z Get:19 http://security.ubuntu.com/ubuntu focal-security/main amd64 Packages [655 kB] 2021-05-16T17:31:09.1518024Z Get:20 http://security.ubuntu.com/ubuntu focal-security/main Translation-en [131 kB] 2021-05-16T17:31:09.1545650Z Get:21 http://security.ubuntu.com/ubuntu focal-security/main amd64 c-n-f Metadata [7508 B] 2021-05-16T17:31:09.1547161Z Get:22 http://security.ubuntu.com/ubuntu focal-security/restricted amd64 Packages [203 kB] 2021-05-16T17:31:09.1564017Z Get:23 http://security.ubuntu.com/ubuntu focal-security/restricted Translation-en [29.7 kB] 2021-05-16T17:31:09.1569208Z Get:24 http://security.ubuntu.com/ubuntu focal-security/universe amd64 Packages [565 kB] 2021-05-16T17:31:09.1696458Z Get:25 http://security.ubuntu.com/ubuntu focal-security/universe amd64 c-n-f Metadata [11.0 kB] 2021-05-16T17:31:15.0840269Z Fetched 4463 kB in 1s (4752 kB/s) 2021-05-16T17:31:15.8040612Z Reading package lists... 2021-05-16T17:31:15.8272405Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get update -y -qq 2021-05-16T17:31:17.5337931Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get install -y gdebi-core qpdf devscripts 2021-05-16T17:31:17.5950357Z Reading package lists... 2021-05-16T17:31:18.3012969Z Building dependency tree... 2021-05-16T17:31:18.3015053Z Reading state information... 2021-05-16T17:31:18.3015861Z The following additional packages will be installed: 2021-05-16T17:31:18.3017435Z dctrl-tools diffstat dput gettext intltool-debian libapt-pkg-perl 2021-05-16T17:31:18.3018786Z libarchive-zip-perl libarray-intspan-perl libasync-mergepoint-perl 2021-05-16T17:31:18.3020338Z libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl 2021-05-16T17:31:18.3021954Z libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl 2021-05-16T17:31:18.3031559Z libcommon-sense-perl libconst-fast-perl libcontextual-return-perl 2021-05-16T17:31:18.3032951Z libcpanel-json-xs-perl libcroco3 libdata-optlist-perl 2021-05-16T17:31:18.3034402Z libdevel-callchecker-perl libdevel-size-perl libdigest-bubblebabble-perl 2021-05-16T17:31:18.3035918Z libdigest-hmac-perl libdistro-info-perl libdynaloader-functions-perl 2021-05-16T17:31:18.3037433Z libemail-valid-perl libexporter-tiny-perl libfile-chdir-perl 2021-05-16T17:31:18.3040129Z libfile-find-rule-perl libfile-homedir-perl libfile-which-perl 2021-05-16T17:31:18.3042039Z libfont-ttf-perl libfuture-perl libgetopt-long-descriptive-perl 2021-05-16T17:31:18.3043574Z libgit-wrapper-perl libgitlab-api-v4-perl libhash-fieldhash-perl 2021-05-16T17:31:18.3045117Z libhttp-tiny-multipart-perl libimport-into-perl libio-async-loop-epoll-perl 2021-05-16T17:31:18.3046891Z libio-async-perl libio-prompter-perl libio-pty-perl libio-string-perl 2021-05-16T17:31:18.3048185Z libipc-run-perl libjson-maybexs-perl libjson-perl libjson-xs-perl 2021-05-16T17:31:18.3049528Z liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl 2021-05-16T17:31:18.3050802Z liblist-someutils-perl liblist-someutils-xs-perl 2021-05-16T17:31:18.3052264Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-05-16T17:31:18.3054810Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-05-16T17:31:18.3056060Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-05-16T17:31:18.3057185Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-05-16T17:31:18.3058314Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-05-16T17:31:18.3059613Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-05-16T17:31:18.3060991Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-05-16T17:31:18.3062254Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-05-16T17:31:18.3063467Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-05-16T17:31:18.3064745Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-05-16T17:31:18.3066047Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-05-16T17:31:18.3067340Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-05-16T17:31:18.3068667Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-05-16T17:31:18.3069972Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-05-16T17:31:18.3071358Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-05-16T17:31:18.3072753Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-05-16T17:31:18.3074009Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-05-16T17:31:18.3075245Z libtype-tiny-perl libtype-tiny-xs-perl libtypes-serialiser-perl 2021-05-16T17:31:18.3076520Z libunicode-utf8-perl libvariable-magic-perl libwant-perl libxml-writer-perl 2021-05-16T17:31:18.3077717Z libyaml-libyaml-perl licensecheck lintian patchutils python3-gpg 2021-05-16T17:31:18.3078878Z python3-magic python3-unidiff python3-xdg t1utils wdiff 2021-05-16T17:31:18.3079472Z Suggested packages: 2021-05-16T17:31:18.3080229Z debtags adequate autopkgtest bls-standalone bsd-mailx | mailx 2021-05-16T17:31:18.3081277Z check-all-the-things cvs-buildpackage debhelper devscripts-el diffoscope 2021-05-16T17:31:18.3082502Z disorderfs dose-extra duck faketime gnuplot how-can-i-help libdbd-pg-perl 2021-05-16T17:31:18.3083638Z libnet-smtps-perl libterm-size-perl libyaml-syck-perl mozilla-devscripts 2021-05-16T17:31:18.3084769Z mutt piuparts quilt ratt reprotest svn-buildpackage w3m debian-keyring 2021-05-16T17:31:18.3085808Z equivs libsoap-lite-perl python3-paramiko mini-dinstall gettext-doc 2021-05-16T17:31:18.3086899Z autopoint libasprintf-dev libgettextpo-dev libossp-uuid-perl 2021-05-16T17:31:18.3088102Z libscalar-number-perl libbareword-filehandles-perl libindirect-perl 2021-05-16T17:31:18.3089489Z libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl 2021-05-16T17:31:18.3090695Z binutils-multiarch libtext-template-perl wdiff-doc 2021-05-16T17:31:18.3289721Z The following NEW packages will be installed: 2021-05-16T17:31:18.3292886Z dctrl-tools devscripts diffstat dput gdebi-core gettext intltool-debian 2021-05-16T17:31:18.3294442Z libapt-pkg-perl libarchive-zip-perl libarray-intspan-perl 2021-05-16T17:31:18.3296031Z libasync-mergepoint-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl 2021-05-16T17:31:18.3299171Z libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl 2021-05-16T17:31:18.3300709Z libclone-perl libcommon-sense-perl libconst-fast-perl 2021-05-16T17:31:18.3302075Z libcontextual-return-perl libcpanel-json-xs-perl libcroco3 2021-05-16T17:31:18.3303516Z libdata-optlist-perl libdevel-callchecker-perl libdevel-size-perl 2021-05-16T17:31:18.3313993Z libdigest-bubblebabble-perl libdigest-hmac-perl libdistro-info-perl 2021-05-16T17:31:18.3316646Z libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl 2021-05-16T17:31:18.3318198Z libfile-chdir-perl libfile-find-rule-perl libfile-homedir-perl 2021-05-16T17:31:18.3319502Z libfile-which-perl libfont-ttf-perl libfuture-perl 2021-05-16T17:31:18.3320972Z libgetopt-long-descriptive-perl libgit-wrapper-perl libgitlab-api-v4-perl 2021-05-16T17:31:18.3323410Z libhash-fieldhash-perl libhttp-tiny-multipart-perl libimport-into-perl 2021-05-16T17:31:18.3324747Z libio-async-loop-epoll-perl libio-async-perl libio-prompter-perl 2021-05-16T17:31:18.3325969Z libio-pty-perl libio-string-perl libipc-run-perl libjson-maybexs-perl 2021-05-16T17:31:18.3327169Z libjson-perl libjson-xs-perl liblinux-epoll-perl liblist-compare-perl 2021-05-16T17:31:18.3328466Z liblist-moreutils-perl liblist-someutils-perl liblist-someutils-xs-perl 2021-05-16T17:31:18.3329940Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-05-16T17:31:18.3331391Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-05-16T17:31:18.3332632Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-05-16T17:31:18.3333755Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-05-16T17:31:18.3335259Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-05-16T17:31:18.3336545Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-05-16T17:31:18.3337932Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-05-16T17:31:18.3339196Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-05-16T17:31:18.3340416Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-05-16T17:31:18.3341690Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-05-16T17:31:18.3342984Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-05-16T17:31:18.3344296Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-05-16T17:31:18.3345781Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-05-16T17:31:18.3347096Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-05-16T17:31:18.3348478Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-05-16T17:31:18.3349871Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-05-16T17:31:18.3351214Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-05-16T17:31:18.3352442Z libtype-tiny-perl libtype-tiny-xs-perl libtypes-serialiser-perl 2021-05-16T17:31:18.3353713Z libunicode-utf8-perl libvariable-magic-perl libwant-perl libxml-writer-perl 2021-05-16T17:31:18.3354899Z libyaml-libyaml-perl licensecheck lintian patchutils python3-gpg 2021-05-16T17:31:18.3355883Z python3-magic python3-unidiff python3-xdg qpdf t1utils wdiff 2021-05-16T17:31:18.3530269Z 0 upgraded, 130 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:31:18.3531113Z Need to get 8648 kB of archives. 2021-05-16T17:31:18.3532003Z After this operation, 32.3 MB of additional disk space will be used. 2021-05-16T17:31:18.3534792Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dctrl-tools amd64 2.24-3 [61.5 kB] 2021-05-16T17:31:18.3561922Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-which-perl all 1.23-1 [13.8 kB] 2021-05-16T17:31:18.3569086Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-homedir-perl all 1.004-1 [37.3 kB] 2021-05-16T17:31:18.3579180Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-pty-perl amd64 1:1.12-1 [32.4 kB] 2021-05-16T17:31:18.3588163Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libipc-run-perl all 20180523.0-2 [89.7 kB] 2021-05-16T17:31:18.3602272Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-method-modifiers-perl all 2.13-1 [16.2 kB] 2021-05-16T17:31:18.3607829Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-op-check-perl amd64 0.22-1build2 [10.2 kB] 2021-05-16T17:31:18.3613672Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdynaloader-functions-perl all 0.003-1 [11.9 kB] 2021-05-16T17:31:18.3619449Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-callchecker-perl amd64 0.008-1ubuntu1 [14.5 kB] 2021-05-16T17:31:18.3627168Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-classify-perl amd64 0.015-1build2 [21.1 kB] 2021-05-16T17:31:18.3634591Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-runtime-perl all 0.016-1 [16.2 kB] 2021-05-16T17:31:18.3639463Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimport-into-perl all 1.002005-1 [11.0 kB] 2021-05-16T17:31:18.3643881Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librole-tiny-perl all 2.001004-1 [16.5 kB] 2021-05-16T17:31:18.3649401Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstrictures-perl all 2.000006-1 [16.3 kB] 2021-05-16T17:31:18.3661653Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-quote-perl all 2.006006-1 [19.5 kB] 2021-05-16T17:31:18.3667175Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoo-perl all 2.003006-1 [46.3 kB] 2021-05-16T17:31:18.3676165Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 patchutils amd64 0.3.4-2 [71.1 kB] 2021-05-16T17:31:18.3695331Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 wdiff amd64 1.2.2-2build1 [29.8 kB] 2021-05-16T17:31:18.3702357Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 devscripts amd64 2.20.2ubuntu2 [940 kB] 2021-05-16T17:31:18.3888869Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 diffstat amd64 1.63-1 [27.2 kB] 2021-05-16T17:31:18.3898643Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-gpg amd64 1.13.1-7ubuntu2 [165 kB] 2021-05-16T17:31:18.3931201Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dput all 1.0.3ubuntu1 [42.3 kB] 2021-05-16T17:31:18.3940560Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdebi-core all 0.9.5.7+nmu3 [116 kB] 2021-05-16T17:31:18.3969608Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB] 2021-05-16T17:31:18.3983865Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gettext amd64 0.19.8.1-10build1 [895 kB] 2021-05-16T17:31:18.4162932Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] 2021-05-16T17:31:18.4169437Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libapt-pkg-perl amd64 0.1.36build3 [68.5 kB] 2021-05-16T17:31:18.4180199Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-zip-perl all 1.67-2 [90.5 kB] 2021-05-16T17:31:18.4197956Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarray-intspan-perl all 2.003-1 [23.3 kB] 2021-05-16T17:31:18.4204909Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasync-mergepoint-perl all 0.04-2 [10.2 kB] 2021-05-16T17:31:18.4211822Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-implementation-perl all 0.09-1 [12.2 kB] 2021-05-16T17:31:18.4218486Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [6784 B] 2021-05-16T17:31:18.4225289Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvariable-magic-perl amd64 0.62-1build2 [34.4 kB] 2021-05-16T17:31:18.4230741Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-endofscope-perl all 0.24-1 [16.8 kB] 2021-05-16T17:31:18.4257401Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcapture-tiny-perl all 0.48-1 [20.4 kB] 2021-05-16T17:31:18.4264421Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-xsaccessor-perl amd64 1.19-3build3 [33.6 kB] 2021-05-16T17:31:18.4314485Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclone-perl amd64 0.43-2 [11.0 kB] 2021-05-16T17:31:18.4321098Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcommon-sense-perl amd64 3.74-2build6 [20.1 kB] 2021-05-16T17:31:18.4326439Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-util-perl amd64 1.07-3build5 [19.7 kB] 2021-05-16T17:31:18.4332232Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-install-perl all 0.928-1 [10.5 kB] 2021-05-16T17:31:18.4340348Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdata-optlist-perl all 0.110-1 [9956 B] 2021-05-16T17:31:18.4344634Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-perl all 0.987-1 [44.9 kB] 2021-05-16T17:31:18.4357001Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libconst-fast-perl all 0.014-1 [7958 B] 2021-05-16T17:31:18.4362087Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwant-perl amd64 0.29-1build4 [24.2 kB] 2021-05-16T17:31:18.4367004Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcontextual-return-perl all 0.004014-2 [53.1 kB] 2021-05-16T17:31:18.4379968Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcpanel-json-xs-perl amd64 4.19-1build1 [109 kB] 2021-05-16T17:31:18.4411961Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-bubblebabble-perl all 0.02-2 [7908 B] 2021-05-16T17:31:18.4413780Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.3 kB] 2021-05-16T17:31:18.4421802Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdistro-info-perl all 0.23ubuntu1 [4668 B] 2021-05-16T17:31:18.4423896Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-ip-perl all 1.26-2 [27.4 kB] 2021-05-16T17:31:18.4431837Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-perl all 1.22-1 [336 kB] 2021-05-16T17:31:18.4515120Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-domain-tld-perl all 1.75-1 [29.1 kB] 2021-05-16T17:31:18.4522780Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libemail-valid-perl all 1.202-1 [16.3 kB] 2021-05-16T17:31:18.4532233Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libexporter-tiny-perl all 1.002001-1 [35.5 kB] 2021-05-16T17:31:18.4541342Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-chdir-perl all 0.1008-1 [11.7 kB] 2021-05-16T17:31:18.4545789Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-compare-perl all 0.03-1 [7318 B] 2021-05-16T17:31:18.4550442Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-glob-perl all 0.10-1 [7554 B] 2021-05-16T17:31:18.4555920Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-find-rule-perl all 0.34-1 [28.3 kB] 2021-05-16T17:31:18.4568119Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-string-perl all 1.08-3 [11.1 kB] 2021-05-16T17:31:18.4569527Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfont-ttf-perl all 1.06-1 [313 kB] 2021-05-16T17:31:18.4602370Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfuture-perl all 0.43-1 [77.8 kB] 2021-05-16T17:31:18.4616412Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-validate-perl amd64 1.29-3 [52.7 kB] 2021-05-16T17:31:18.4626443Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgetopt-long-descriptive-perl all 0.104-1 [24.6 kB] 2021-05-16T17:31:18.4640534Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-versions-perl all 1.62-1 [9294 B] 2021-05-16T17:31:18.4646473Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgit-wrapper-perl all 0.048-1 [29.9 kB] 2021-05-16T17:31:18.4653085Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhttp-tiny-multipart-perl all 0.08-1 [8488 B] 2021-05-16T17:31:18.4657436Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-prompter-perl all 0.004015-1 [58.1 kB] 2021-05-16T17:31:18.4671814Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-perl all 4.02000-2 [80.9 kB] 2021-05-16T17:31:18.4696984Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-perl all 1.708-1 [67.8 kB] 2021-05-16T17:31:18.4709129Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-adapter-screen-perl all 0.140-1 [12.1 kB] 2021-05-16T17:31:18.4715275Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-perl all 0.38-1 [19.1 kB] 2021-05-16T17:31:18.4721102Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-identify-perl amd64 0.14-1build2 [10.7 kB] 2021-05-16T17:31:18.4726189Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-name-perl amd64 0.26-1 [11.5 kB] 2021-05-16T17:31:18.4731558Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnamespace-clean-perl all 0.27-1 [13.6 kB] 2021-05-16T17:31:18.4737264Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-tiny-perl all 0.108-1 [42.6 kB] 2021-05-16T17:31:18.4744740Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-perl all 1.008001-2 [304 kB] 2021-05-16T17:31:18.4788950Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgitlab-api-v4-perl all 0.25-1 [83.8 kB] 2021-05-16T17:31:18.4804300Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhash-fieldhash-perl amd64 0.15-1build2 [16.9 kB] 2021-05-16T17:31:18.4812900Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstruct-dumb-perl all 0.09-1 [10.5 kB] 2021-05-16T17:31:18.4819470Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-perl all 0.75-1 [254 kB] 2021-05-16T17:31:18.4866726Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.0 kB] 2021-05-16T17:31:18.4873955Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-loop-epoll-perl all 0.20-1 [10.4 kB] 2021-05-16T17:31:18.4879457Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtypes-serialiser-perl all 1.0-1 [12.1 kB] 2021-05-16T17:31:18.4885092Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-xs-perl amd64 4.020-1build1 [83.7 kB] 2021-05-16T17:31:18.4902537Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-maybexs-perl all 1.004000-1 [11.0 kB] 2021-05-16T17:31:18.4908777Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-compare-perl all 0.53-1 [65.6 kB] 2021-05-16T17:31:18.4921217Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-moreutils-perl amd64 0.416-1build5 [55.5 kB] 2021-05-16T17:31:18.4936933Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-perl all 0.58-1 [29.7 kB] 2021-05-16T17:31:18.4973387Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-xs-perl amd64 0.58-2 [32.5 kB] 2021-05-16T17:31:18.4980790Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-aliases-perl all 0.001006-1 [7176 B] 2021-05-16T17:31:18.4986072Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libobject-id-perl all 0.1.2-2ubuntu1 [15.9 kB] 2021-05-16T17:31:18.4991420Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-struct-perl all 0.017-1 [23.4 kB] 2021-05-16T17:31:18.4997317Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-sec-perl amd64 1.15-1 [44.6 kB] 2021-05-16T17:31:18.5003236Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-libidn-perl amd64 0.12.ds-3build2 [17.3 kB] 2021-05-16T17:31:18.5009550Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-range-perl all 0.12-1 [8556 B] 2021-05-16T17:31:18.5015059Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-xs-perl amd64 0.29-1build1 [18.4 kB] 2021-05-16T17:31:18.5020904Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-iterator-rule-perl all 1.014-1 [49.5 kB] 2021-05-16T17:31:18.5027018Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperl4-corelibs-perl all 0.004-2 [37.4 kB] 2021-05-16T17:31:18.5034484Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperlio-gzip-perl amd64 0.19-1build5 [14.6 kB] 2021-05-16T17:31:18.5040379Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpod-constants-perl all 0.19-1 [16.0 kB] 2021-05-16T17:31:18.5045895Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqpdf26 amd64 9.1.1-1build1 [421 kB] 2021-05-16T17:31:18.5268547Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libre-engine-re2-perl amd64 0.13-5 [16.2 kB] 2021-05-16T17:31:18.5475802Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libreadonly-perl all 2.050-2 [19.9 kB] 2021-05-16T17:31:18.5536072Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-perl all 0.204-1 [15.0 kB] 2021-05-16T17:31:18.5571810Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-xs-perl amd64 0.117-1build2 [12.0 kB] 2021-05-16T17:31:18.5611602Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-license-perl all 3.2.0-1 [36.2 kB] 2021-05-16T17:31:18.5680537Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-perl all 0.2.12-1 [17.1 kB] 2021-05-16T17:31:18.5749522Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-decoder-perl amd64 4.011+ds-1build1 [102 kB] 2021-05-16T17:31:18.5855284Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-encoder-perl amd64 4.011+ds-1build1 [104 kB] 2021-05-16T17:31:18.5950126Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-perl all 4.011-1 [8604 B] 2021-05-16T17:31:18.6017779Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-key-perl amd64 1.33-2build2 [35.4 kB] 2021-05-16T17:31:18.6342413Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-copyright-perl all 0.003006-1 [9608 B] 2021-05-16T17:31:18.6383495Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-escape-perl all 2010.002-2 [17.6 kB] 2021-05-16T17:31:18.6447340Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-shellquote-perl all 1.04-1 [12.0 kB] 2021-05-16T17:31:18.6487721Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libterm-readkey-perl amd64 2.38-1build1 [24.6 kB] 2021-05-16T17:31:18.6546978Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-fatal-perl all 0.014-1 [11.1 kB] 2021-05-16T17:31:18.6619425Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-refcount-perl all 0.10-1 [11.4 kB] 2021-05-16T17:31:18.6658695Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-levenshtein-perl all 0.13-1 [9612 B] 2021-05-16T17:31:18.6733438Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-xs-perl amd64 0.016-1 [22.9 kB] 2021-05-16T17:31:18.6799869Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libunicode-utf8-perl amd64 0.62-1build1 [18.1 kB] 2021-05-16T17:31:18.6861719Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxml-writer-perl all 0.625-1 [24.9 kB] 2021-05-16T17:31:18.6958123Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [28.5 kB] 2021-05-16T17:31:18.7724795Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 licensecheck all 3.0.45-1 [23.9 kB] 2021-05-16T17:31:18.7831214Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-size-perl amd64 0.83-1build1 [20.0 kB] 2021-05-16T17:31:18.7903662Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 t1utils amd64 1.41-3 [56.1 kB] 2021-05-16T17:31:18.8032401Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 lintian all 2.62.0 [980 kB] 2021-05-16T17:31:18.8384337Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-unidiff all 0.5.5-2 [9180 B] 2021-05-16T17:31:18.8427745Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-xdg all 0.26-1ubuntu1 [36.1 kB] 2021-05-16T17:31:18.8508812Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qpdf amd64 9.1.1-1build1 [476 kB] 2021-05-16T17:31:18.8719667Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-magic all 2:0.4.15-3 [9376 B] 2021-05-16T17:31:19.5376979Z Fetched 8648 kB in 1s (16.2 MB/s) 2021-05-16T17:31:19.5685990Z Selecting previously unselected package dctrl-tools. 2021-05-16T17:31:19.5837956Z (Reading database ... 2021-05-16T17:31:19.5838453Z (Reading database ... 5% 2021-05-16T17:31:19.5838857Z (Reading database ... 10% 2021-05-16T17:31:19.5839269Z (Reading database ... 15% 2021-05-16T17:31:19.5839666Z (Reading database ... 20% 2021-05-16T17:31:19.5840071Z (Reading database ... 25% 2021-05-16T17:31:19.5840466Z (Reading database ... 30% 2021-05-16T17:31:19.5840873Z (Reading database ... 35% 2021-05-16T17:31:19.5841264Z (Reading database ... 40% 2021-05-16T17:31:19.5841692Z (Reading database ... 45% 2021-05-16T17:31:19.5842082Z (Reading database ... 50% 2021-05-16T17:31:19.6159219Z (Reading database ... 55% 2021-05-16T17:31:19.6548227Z (Reading database ... 60% 2021-05-16T17:31:19.6933263Z (Reading database ... 65% 2021-05-16T17:31:19.7305690Z (Reading database ... 70% 2021-05-16T17:31:19.8008783Z (Reading database ... 75% 2021-05-16T17:31:19.8786330Z (Reading database ... 80% 2021-05-16T17:31:19.9648112Z (Reading database ... 85% 2021-05-16T17:31:20.0248404Z (Reading database ... 90% 2021-05-16T17:31:20.0725359Z (Reading database ... 95% 2021-05-16T17:31:20.0726265Z (Reading database ... 100% 2021-05-16T17:31:20.0727116Z (Reading database ... 254809 files and directories currently installed.) 2021-05-16T17:31:20.0832228Z Preparing to unpack .../000-dctrl-tools_2.24-3_amd64.deb ... 2021-05-16T17:31:20.0925203Z Unpacking dctrl-tools (2.24-3) ... 2021-05-16T17:31:20.1217563Z Selecting previously unselected package libfile-which-perl. 2021-05-16T17:31:20.1424824Z Preparing to unpack .../001-libfile-which-perl_1.23-1_all.deb ... 2021-05-16T17:31:20.1434175Z Unpacking libfile-which-perl (1.23-1) ... 2021-05-16T17:31:20.1695264Z Selecting previously unselected package libfile-homedir-perl. 2021-05-16T17:31:20.1875306Z Preparing to unpack .../002-libfile-homedir-perl_1.004-1_all.deb ... 2021-05-16T17:31:20.1883324Z Unpacking libfile-homedir-perl (1.004-1) ... 2021-05-16T17:31:20.2137043Z Selecting previously unselected package libio-pty-perl. 2021-05-16T17:31:20.2354509Z Preparing to unpack .../003-libio-pty-perl_1%3a1.12-1_amd64.deb ... 2021-05-16T17:31:20.2364735Z Unpacking libio-pty-perl (1:1.12-1) ... 2021-05-16T17:31:20.2657528Z Selecting previously unselected package libipc-run-perl. 2021-05-16T17:31:20.2844915Z Preparing to unpack .../004-libipc-run-perl_20180523.0-2_all.deb ... 2021-05-16T17:31:20.2855507Z Unpacking libipc-run-perl (20180523.0-2) ... 2021-05-16T17:31:20.3216556Z Selecting previously unselected package libclass-method-modifiers-perl. 2021-05-16T17:31:20.3385821Z Preparing to unpack .../005-libclass-method-modifiers-perl_2.13-1_all.deb ... 2021-05-16T17:31:20.3395839Z Unpacking libclass-method-modifiers-perl (2.13-1) ... 2021-05-16T17:31:20.3615331Z Selecting previously unselected package libb-hooks-op-check-perl. 2021-05-16T17:31:20.3865284Z Preparing to unpack .../006-libb-hooks-op-check-perl_0.22-1build2_amd64.deb ... 2021-05-16T17:31:20.3888253Z Unpacking libb-hooks-op-check-perl (0.22-1build2) ... 2021-05-16T17:31:20.4163348Z Selecting previously unselected package libdynaloader-functions-perl. 2021-05-16T17:31:20.4370065Z Preparing to unpack .../007-libdynaloader-functions-perl_0.003-1_all.deb ... 2021-05-16T17:31:20.4393633Z Unpacking libdynaloader-functions-perl (0.003-1) ... 2021-05-16T17:31:20.4656984Z Selecting previously unselected package libdevel-callchecker-perl. 2021-05-16T17:31:20.4853769Z Preparing to unpack .../008-libdevel-callchecker-perl_0.008-1ubuntu1_amd64.deb ... 2021-05-16T17:31:20.4865922Z Unpacking libdevel-callchecker-perl (0.008-1ubuntu1) ... 2021-05-16T17:31:20.5135345Z Selecting previously unselected package libparams-classify-perl. 2021-05-16T17:31:20.5359829Z Preparing to unpack .../009-libparams-classify-perl_0.015-1build2_amd64.deb ... 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Done 2021-05-16T17:31:47.3611494Z [command]/usr/bin/sudo ln -s /opt/R/devel/bin/R /usr/local/bin/R 2021-05-16T17:31:47.3705927Z [command]/usr/bin/sudo ln -s /opt/R/devel/bin/Rscript /usr/local/bin/Rscript 2021-05-16T17:31:47.3958699Z ##[group]Run r-lib/actions/setup-tinytex@master 2021-05-16T17:31:47.3959174Z env: 2021-05-16T17:31:47.3959577Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:31:47.3960019Z TIC_DEPLOY_KEY: 2021-05-16T17:31:47.3960750Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:31:47.3962391Z GITHUB_PAT: *** 2021-05-16T17:31:47.3962758Z COVERALLS_TOKEN: 2021-05-16T17:31:47.3963207Z continue-on-error: true 2021-05-16T17:31:47.3963645Z VDIFFR_RUN_TESTS: 2021-05-16T17:31:47.3964081Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:31:47.3964494Z TZ: UTC 2021-05-16T17:31:47.3964841Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:31:47.3965223Z NOT_CRAN: true 2021-05-16T17:31:47.3965564Z ##[endgroup] 2021-05-16T17:31:47.4448579Z [command]sudo apt-get install -y texinfo 2021-05-16T17:31:47.7354530Z Reading package lists... 2021-05-16T17:31:47.8728142Z Building dependency tree... 2021-05-16T17:31:47.8742590Z Reading state information... 2021-05-16T17:31:48.0610552Z texinfo is already the newest version (6.7.0.dfsg.2-5). 2021-05-16T17:31:48.0611836Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:31:48.2739230Z [command]sh /home/runner/work/_temp/install-unx.sh 2021-05-16T17:31:48.2881567Z --2021-05-16 17:31:48-- https://yihui.org/tinytex/TinyTeX-1.tar.gz 2021-05-16T17:31:48.2920197Z Resolving yihui.org (yihui.org)... 76.223.126.88 2021-05-16T17:31:48.2994059Z Connecting to yihui.org (yihui.org)|76.223.126.88|:443... connected. 2021-05-16T17:31:48.3582855Z HTTP request sent, awaiting response... 301 Moved Permanently 2021-05-16T17:31:48.3615990Z Location: https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu [following] 2021-05-16T17:31:48.3617991Z --2021-05-16 17:31:48-- https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu 2021-05-16T17:31:48.4343538Z Resolving ci.appveyor.com (ci.appveyor.com)... 138.91.141.243 2021-05-16T17:31:48.5002483Z Connecting to ci.appveyor.com (ci.appveyor.com)|138.91.141.243|:443... connected. 2021-05-16T17:31:48.7180856Z HTTP request sent, awaiting response... 302 Found 2021-05-16T17:31:48.7186787Z Location: https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1549/grr7rkdr54m0yum8/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=ZXHL065obQu0HnJ140aeCvWE7tICcvaf8Y06nc550CY%3D&st=2021-05-16T17%3A30%3A48Z&se=2021-05-16T17%3A36%3A48Z&sp=r [following] 2021-05-16T17:31:48.7190998Z --2021-05-16 17:31:48-- https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1549/grr7rkdr54m0yum8/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=ZXHL065obQu0HnJ140aeCvWE7tICcvaf8Y06nc550CY%3D&st=2021-05-16T17%3A30%3A48Z&se=2021-05-16T17%3A36%3A48Z&sp=r 2021-05-16T17:31:48.7376546Z Resolving appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)... 52.239.228.196 2021-05-16T17:31:48.7996040Z Connecting to appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)|52.239.228.196|:443... connected. 2021-05-16T17:31:49.1108372Z HTTP request sent, awaiting response... 200 OK 2021-05-16T17:31:49.1109853Z Length: 67310420 (64M) [application/octet-stream] 2021-05-16T17:31:49.1111588Z Saving to: ‘TinyTeX.tar.gz’ 2021-05-16T17:31:49.7283570Z 2021-05-16T17:31:51.2650201Z 0K ........ ........ ........ ........ 49% 15.4M 2s 2021-05-16T17:31:52.3997487Z 32768K ........ ........ ........ ........ 99% 27.7M 0s 2021-05-16T17:31:52.4000647Z 65536K 100% 3.06M=3.3s 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--no-error-if-no-engine=luajithbtex,luajittex,mfluajit --status-file=/tmp/EtvlcBfgGL/g5QyQL7q8b. 2021-05-16T17:32:03.1263505Z OK: optex.fmt/luatex 2021-05-16T17:32:03.1264721Z tlmgr: package log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr.log 2021-05-16T17:32:03.1266115Z tlmgr: command log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr-commands.log 2021-05-16T17:32:04.2925815Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-05-16T17:32:04.2927547Z tlmgr: no updates available 2021-05-16T17:32:04.3906300Z ##[group]Run r-lib/actions/setup-pandoc@master 2021-05-16T17:32:04.3906774Z with: 2021-05-16T17:32:04.3907126Z pandoc-version: 2.7.3 2021-05-16T17:32:04.3907490Z env: 2021-05-16T17:32:04.3907877Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:32:04.3908312Z TIC_DEPLOY_KEY: 2021-05-16T17:32:04.3909044Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:32:04.3910675Z GITHUB_PAT: *** 2021-05-16T17:32:04.3911050Z COVERALLS_TOKEN: 2021-05-16T17:32:04.3911492Z continue-on-error: true 2021-05-16T17:32:04.3911924Z VDIFFR_RUN_TESTS: 2021-05-16T17:32:04.3912359Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:32:04.3912770Z TZ: UTC 2021-05-16T17:32:04.3913119Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:32:04.3913503Z NOT_CRAN: true 2021-05-16T17:32:04.3913838Z ##[endgroup] 2021-05-16T17:32:04.9084773Z [command]sudo apt-get install -y gdebi-core 2021-05-16T17:32:04.9724100Z Reading package lists... 2021-05-16T17:32:05.1258838Z Building dependency tree... 2021-05-16T17:32:05.1273152Z Reading state information... 2021-05-16T17:32:05.3318853Z gdebi-core is already the newest version (0.9.5.7+nmu3). 2021-05-16T17:32:05.3319976Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:32:05.3343121Z [command]sudo gdebi --non-interactive /home/runner/work/_temp/pandoc-2.7.3-1-amd64.deb 2021-05-16T17:32:05.4436090Z 2021-05-16T17:32:05.4585351Z 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2021-05-16T17:32:05.9088292Z 2021-05-16T17:32:05.9088800Z Reading state information... 87% 2021-05-16T17:32:05.9124245Z 2021-05-16T17:32:05.9124754Z Reading state information... 89% 2021-05-16T17:32:05.9157588Z 2021-05-16T17:32:05.9158110Z Reading state information... 91% 2021-05-16T17:32:05.9193268Z 2021-05-16T17:32:05.9193786Z Reading state information... 93% 2021-05-16T17:32:05.9229395Z 2021-05-16T17:32:05.9229894Z Reading state information... 95% 2021-05-16T17:32:05.9267186Z 2021-05-16T17:32:05.9267680Z Reading state information... 97% 2021-05-16T17:32:05.9302214Z 2021-05-16T17:32:05.9302760Z Reading state information... 99% 2021-05-16T17:32:06.1792191Z Selecting previously unselected package pandoc. 2021-05-16T17:32:06.2872926Z (Reading database ... 261973 files and directories currently installed.) 2021-05-16T17:32:06.2975798Z Preparing to unpack .../_temp/pandoc-2.7.3-1-amd64.deb ... 2021-05-16T17:32:06.2988808Z Unpacking pandoc (2.7.3-1) ... 2021-05-16T17:32:08.4995215Z Setting up pandoc (2.7.3-1) ... 2021-05-16T17:32:08.5019724Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:32:09.1974496Z 2021-05-16T17:32:09.1975397Z 2021-05-16T17:32:09.1976096Z Reading state information... Done 2021-05-16T17:32:09.2343309Z ##[group]Run git config user.name adigherman 2021-05-16T17:32:09.2344257Z git config user.name adigherman 2021-05-16T17:32:09.2344803Z git config user.email adig@jhu.edu 2021-05-16T17:32:09.2384529Z shell: /usr/bin/bash -e {0} 2021-05-16T17:32:09.2384898Z env: 2021-05-16T17:32:09.2385342Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:32:09.2385790Z TIC_DEPLOY_KEY: 2021-05-16T17:32:09.2386563Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:32:09.2388069Z GITHUB_PAT: *** 2021-05-16T17:32:09.2388473Z COVERALLS_TOKEN: 2021-05-16T17:32:09.2388946Z continue-on-error: true 2021-05-16T17:32:09.2389387Z VDIFFR_RUN_TESTS: 2021-05-16T17:32:09.2389861Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:32:09.2390284Z TZ: UTC 2021-05-16T17:32:09.2390666Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:32:09.2391058Z NOT_CRAN: true 2021-05-16T17:32:09.2391441Z ##[endgroup] 2021-05-16T17:32:09.2675178Z ##[group]Run adigherman/actions/install-sysdeps-linux@master 2021-05-16T17:32:09.2675770Z env: 2021-05-16T17:32:09.2676221Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:32:09.2676663Z TIC_DEPLOY_KEY: 2021-05-16T17:32:09.2677427Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:32:09.2679040Z GITHUB_PAT: *** 2021-05-16T17:32:09.2679434Z COVERALLS_TOKEN: 2021-05-16T17:32:09.2679898Z continue-on-error: true 2021-05-16T17:32:09.2680339Z VDIFFR_RUN_TESTS: 2021-05-16T17:32:09.2680812Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:32:09.2681230Z TZ: UTC 2021-05-16T17:32:09.2681610Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:32:09.2681998Z NOT_CRAN: true 2021-05-16T17:32:09.2682373Z ##[endgroup] 2021-05-16T17:32:09.5942682Z Reading package lists... 2021-05-16T17:32:09.7343341Z Building dependency tree... 2021-05-16T17:32:09.7359267Z Reading state information... 2021-05-16T17:32:09.8598036Z The following additional packages will be installed: 2021-05-16T17:32:09.8600916Z cmake-data libjsoncpp1 librhash0 2021-05-16T17:32:09.8606476Z Suggested packages: 2021-05-16T17:32:09.8607263Z cmake-doc ninja-build 2021-05-16T17:32:09.9010012Z The following NEW packages will be installed: 2021-05-16T17:32:09.9014882Z cmake cmake-data libjsoncpp1 librhash0 2021-05-16T17:32:09.9268290Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:32:09.9270447Z Need to get 5470 kB of archives. 2021-05-16T17:32:09.9271634Z After this operation, 28.3 MB of additional disk space will be used. 2021-05-16T17:32:09.9273665Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake-data all 3.16.3-1ubuntu1 [1612 kB] 2021-05-16T17:32:09.9437348Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjsoncpp1 amd64 1.7.4-3.1ubuntu2 [75.6 kB] 2021-05-16T17:32:09.9447199Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librhash0 amd64 1.3.9-1 [113 kB] 2021-05-16T17:32:09.9459409Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake amd64 3.16.3-1ubuntu1 [3669 kB] 2021-05-16T17:32:10.3515073Z Fetched 5470 kB in 0s (80.6 MB/s) 2021-05-16T17:32:10.3848075Z Selecting previously unselected package cmake-data. 2021-05-16T17:32:10.3913802Z (Reading database ... 2021-05-16T17:32:10.3914624Z (Reading database ... 5% 2021-05-16T17:32:10.3915278Z (Reading database ... 10% 2021-05-16T17:32:10.3915940Z (Reading database ... 15% 2021-05-16T17:32:10.3916573Z (Reading database ... 20% 2021-05-16T17:32:10.3917192Z (Reading database ... 25% 2021-05-16T17:32:10.3917818Z (Reading database ... 30% 2021-05-16T17:32:10.3918438Z (Reading database ... 35% 2021-05-16T17:32:10.3919071Z (Reading database ... 40% 2021-05-16T17:32:10.3919697Z (Reading database ... 45% 2021-05-16T17:32:10.3920316Z (Reading database ... 50% 2021-05-16T17:32:10.3950862Z (Reading database ... 55% 2021-05-16T17:32:10.3983964Z (Reading database ... 60% 2021-05-16T17:32:10.4018801Z (Reading database ... 65% 2021-05-16T17:32:10.4131187Z (Reading database ... 70% 2021-05-16T17:32:10.4152383Z (Reading database ... 75% 2021-05-16T17:32:10.4495595Z (Reading database ... 80% 2021-05-16T17:32:10.4775572Z (Reading database ... 85% 2021-05-16T17:32:10.4912680Z (Reading database ... 90% 2021-05-16T17:32:10.4984188Z (Reading database ... 95% 2021-05-16T17:32:10.4987218Z (Reading database ... 100% 2021-05-16T17:32:10.4988039Z (Reading database ... 261980 files and directories currently installed.) 2021-05-16T17:32:10.5099779Z Preparing to unpack .../cmake-data_3.16.3-1ubuntu1_all.deb ... 2021-05-16T17:32:10.5233752Z Unpacking cmake-data (3.16.3-1ubuntu1) ... 2021-05-16T17:32:11.0117873Z Selecting previously unselected package libjsoncpp1:amd64. 2021-05-16T17:32:11.0399487Z Preparing to unpack .../libjsoncpp1_1.7.4-3.1ubuntu2_amd64.deb ... 2021-05-16T17:32:11.0417457Z Unpacking libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-05-16T17:32:11.0725686Z Selecting previously unselected package librhash0:amd64. 2021-05-16T17:32:11.0993594Z Preparing to unpack .../librhash0_1.3.9-1_amd64.deb ... 2021-05-16T17:32:11.1001279Z Unpacking librhash0:amd64 (1.3.9-1) ... 2021-05-16T17:32:11.1286049Z Selecting previously unselected package cmake. 2021-05-16T17:32:11.1558395Z Preparing to unpack .../cmake_3.16.3-1ubuntu1_amd64.deb ... 2021-05-16T17:32:11.1565529Z Unpacking cmake (3.16.3-1ubuntu1) ... 2021-05-16T17:32:11.5475270Z Setting up librhash0:amd64 (1.3.9-1) ... 2021-05-16T17:32:11.5503491Z Setting up cmake-data (3.16.3-1ubuntu1) ... 2021-05-16T17:32:11.5877772Z Setting up libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-05-16T17:32:11.5905766Z Setting up cmake (3.16.3-1ubuntu1) ... 2021-05-16T17:32:11.5928084Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:32:12.6078947Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:32:14.4624779Z Reading package lists... 2021-05-16T17:32:14.6044120Z Building dependency tree... 2021-05-16T17:32:14.6061273Z Reading state information... 2021-05-16T17:32:14.7423548Z Suggested packages: 2021-05-16T17:32:14.7425040Z libssh-doc 2021-05-16T17:32:14.7840239Z The following NEW packages will be installed: 2021-05-16T17:32:14.7843288Z libssh-dev 2021-05-16T17:32:14.8022987Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:32:14.8023819Z Need to get 219 kB of archives. 2021-05-16T17:32:14.8024841Z After this operation, 1127 kB of additional disk space will be used. 2021-05-16T17:32:14.8027078Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-dev amd64 0.9.3-2ubuntu2.1 [219 kB] 2021-05-16T17:32:15.1665545Z Fetched 219 kB in 0s (12.2 MB/s) 2021-05-16T17:32:15.1921506Z Selecting previously unselected package libssh-dev:amd64. 2021-05-16T17:32:15.1987976Z (Reading database ... 2021-05-16T17:32:15.1988722Z (Reading database ... 5% 2021-05-16T17:32:15.1989384Z (Reading database ... 10% 2021-05-16T17:32:15.1990024Z (Reading database ... 15% 2021-05-16T17:32:15.1990676Z (Reading database ... 20% 2021-05-16T17:32:15.1991305Z (Reading database ... 25% 2021-05-16T17:32:15.1992001Z (Reading database ... 30% 2021-05-16T17:32:15.1992643Z (Reading database ... 35% 2021-05-16T17:32:15.1993272Z (Reading database ... 40% 2021-05-16T17:32:15.1993906Z (Reading database ... 45% 2021-05-16T17:32:15.1994531Z (Reading database ... 50% 2021-05-16T17:32:15.2023683Z (Reading database ... 55% 2021-05-16T17:32:15.8149398Z (Reading database ... 60% 2021-05-16T17:32:15.8150044Z (Reading database ... 65% 2021-05-16T17:32:15.8150580Z (Reading database ... 70% 2021-05-16T17:32:15.8151092Z (Reading database ... 75% 2021-05-16T17:32:15.8151614Z (Reading database ... 80% 2021-05-16T17:32:15.8152120Z (Reading database ... 85% 2021-05-16T17:32:15.8152639Z (Reading database ... 90% 2021-05-16T17:32:15.8153148Z (Reading database ... 95% 2021-05-16T17:32:15.8153672Z (Reading database ... 100% 2021-05-16T17:32:15.8154481Z (Reading database ... 264764 files and directories currently installed.) 2021-05-16T17:32:15.8156071Z Preparing to unpack .../libssh-dev_0.9.3-2ubuntu2.1_amd64.deb ... 2021-05-16T17:32:15.8157089Z Unpacking libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-05-16T17:32:15.8158001Z Setting up libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-05-16T17:32:17.2358123Z Reading package lists... 2021-05-16T17:32:17.3785325Z Building dependency tree... 2021-05-16T17:32:17.3802364Z Reading state information... 2021-05-16T17:32:17.5581164Z The following NEW packages will be installed: 2021-05-16T17:32:17.5584934Z jags 2021-05-16T17:32:17.6459067Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:32:17.6459947Z Need to get 1562 kB of archives. 2021-05-16T17:32:17.6460740Z After this operation, 3615 kB of additional disk space will be used. 2021-05-16T17:32:17.6462621Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 jags amd64 4.3.0-3build1 [1562 kB] 2021-05-16T17:32:18.0659048Z Fetched 1562 kB in 0s (11.5 MB/s) 2021-05-16T17:32:18.0975639Z Selecting previously unselected package jags. 2021-05-16T17:32:18.1010527Z (Reading database ... 2021-05-16T17:32:18.1011353Z (Reading database ... 5% 2021-05-16T17:32:18.1012049Z (Reading database ... 10% 2021-05-16T17:32:18.1012686Z (Reading database ... 15% 2021-05-16T17:32:18.1013310Z (Reading database ... 20% 2021-05-16T17:32:18.1014470Z (Reading database ... 25% 2021-05-16T17:32:18.1015140Z (Reading database ... 30% 2021-05-16T17:32:18.1015787Z (Reading database ... 35% 2021-05-16T17:32:18.1016419Z (Reading database ... 40% 2021-05-16T17:32:18.1017049Z (Reading database ... 45% 2021-05-16T17:32:18.1017679Z (Reading database ... 50% 2021-05-16T17:32:18.1047174Z (Reading database ... 55% 2021-05-16T17:32:18.1080533Z (Reading database ... 60% 2021-05-16T17:32:18.1118008Z (Reading database ... 65% 2021-05-16T17:32:18.1233508Z (Reading database ... 70% 2021-05-16T17:32:18.1254444Z (Reading database ... 75% 2021-05-16T17:32:18.1601231Z (Reading database ... 80% 2021-05-16T17:32:18.1883953Z (Reading database ... 85% 2021-05-16T17:32:18.2014740Z (Reading database ... 90% 2021-05-16T17:32:18.2084853Z (Reading database ... 95% 2021-05-16T17:32:18.2085689Z (Reading database ... 100% 2021-05-16T17:32:18.2086630Z (Reading database ... 264783 files and directories currently installed.) 2021-05-16T17:32:18.2194772Z Preparing to unpack .../jags_4.3.0-3build1_amd64.deb ... 2021-05-16T17:32:18.2211998Z Unpacking jags (4.3.0-3build1) ... 2021-05-16T17:32:18.3659973Z Setting up jags (4.3.0-3build1) ... 2021-05-16T17:32:18.3749212Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:32:19.0355552Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:32:20.8987062Z Reading package lists... 2021-05-16T17:32:21.0380537Z Building dependency tree... 2021-05-16T17:32:21.0398955Z Reading state information... 2021-05-16T17:32:21.1772040Z The following additional packages will be installed: 2021-05-16T17:32:21.1776527Z libnode64 libuv1-dev 2021-05-16T17:32:21.2216728Z The following NEW packages will be installed: 2021-05-16T17:32:21.2222350Z libnode-dev libnode64 libuv1-dev 2021-05-16T17:32:21.2565487Z 0 upgraded, 3 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:32:21.2566555Z Need to get 6239 kB of archives. 2021-05-16T17:32:21.2567421Z After this operation, 24.9 MB of additional disk space will be used. 2021-05-16T17:32:21.2569187Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libuv1-dev amd64 1.34.2-1ubuntu1.1 [103 kB] 2021-05-16T17:32:21.2643095Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode64 amd64 10.19.0~dfsg-3ubuntu1 [5765 kB] 2021-05-16T17:32:21.3948371Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode-dev amd64 10.19.0~dfsg-3ubuntu1 [370 kB] 2021-05-16T17:32:21.7647735Z Fetched 6239 kB in 0s (35.9 MB/s) 2021-05-16T17:32:21.7976050Z Selecting previously unselected package libuv1-dev:amd64. 2021-05-16T17:32:21.7989434Z (Reading database ... 2021-05-16T17:32:21.7990162Z (Reading database ... 5% 2021-05-16T17:32:21.7991060Z (Reading database ... 10% 2021-05-16T17:32:21.7991559Z (Reading database ... 15% 2021-05-16T17:32:21.7992063Z (Reading database ... 20% 2021-05-16T17:32:21.7992566Z (Reading database ... 25% 2021-05-16T17:32:21.7993040Z (Reading database ... 30% 2021-05-16T17:32:21.7993497Z (Reading database ... 35% 2021-05-16T17:32:21.7993968Z (Reading database ... 40% 2021-05-16T17:32:21.7994438Z (Reading database ... 45% 2021-05-16T17:32:21.7994896Z (Reading database ... 50% 2021-05-16T17:32:21.8028672Z (Reading database ... 55% 2021-05-16T17:32:21.8061795Z (Reading database ... 60% 2021-05-16T17:32:21.8096949Z (Reading database ... 65% 2021-05-16T17:32:21.8207254Z (Reading database ... 70% 2021-05-16T17:32:21.8228327Z (Reading database ... 75% 2021-05-16T17:32:21.8552696Z (Reading database ... 80% 2021-05-16T17:32:21.8827092Z (Reading database ... 85% 2021-05-16T17:32:21.8960175Z (Reading database ... 90% 2021-05-16T17:32:21.9033905Z (Reading database ... 95% 2021-05-16T17:32:21.9034430Z (Reading database ... 100% 2021-05-16T17:32:21.9035158Z (Reading database ... 264923 files and directories currently installed.) 2021-05-16T17:32:21.9145837Z Preparing to unpack .../libuv1-dev_1.34.2-1ubuntu1.1_amd64.deb ... 2021-05-16T17:32:21.9157556Z Unpacking libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-05-16T17:32:21.9450938Z Selecting previously unselected package libnode64:amd64. 2021-05-16T17:32:21.9704236Z Preparing to unpack .../libnode64_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-05-16T17:32:21.9717097Z Unpacking libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-16T17:32:22.5536306Z Selecting previously unselected package libnode-dev:amd64. 2021-05-16T17:32:22.5720766Z Preparing to unpack .../libnode-dev_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-05-16T17:32:22.5731495Z Unpacking libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-16T17:32:22.6561690Z Setting up libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-05-16T17:32:22.6582088Z Setting up libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-16T17:32:22.6601797Z Setting up libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-16T17:32:22.6623966Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:32:24.5503299Z Reading package lists... 2021-05-16T17:32:24.6910770Z Building dependency tree... 2021-05-16T17:32:24.6927229Z Reading state information... 2021-05-16T17:32:24.8280281Z The following additional packages will be installed: 2021-05-16T17:32:24.8282918Z libfftw3-bin libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-05-16T17:32:24.8287347Z Suggested packages: 2021-05-16T17:32:24.8288678Z libfftw3-doc 2021-05-16T17:32:24.8711473Z The following NEW packages will be installed: 2021-05-16T17:32:24.8715134Z libfftw3-bin libfftw3-dev libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-05-16T17:32:24.8990424Z 0 upgraded, 5 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:32:24.8991171Z Need to get 3986 kB of archives. 2021-05-16T17:32:24.8991871Z After this operation, 22.4 MB of additional disk space will be used. 2021-05-16T17:32:24.8993564Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-long3 amd64 3.3.8-2ubuntu1 [313 kB] 2021-05-16T17:32:24.9068611Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-quad3 amd64 3.3.8-2ubuntu1 [673 kB] 2021-05-16T17:32:24.9176102Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-single3 amd64 3.3.8-2ubuntu1 [756 kB] 2021-05-16T17:32:24.9262988Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-bin amd64 3.3.8-2ubuntu1 [32.2 kB] 2021-05-16T17:32:24.9268125Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-dev amd64 3.3.8-2ubuntu1 [2211 kB] 2021-05-16T17:32:25.3097874Z Fetched 3986 kB in 0s (58.1 MB/s) 2021-05-16T17:32:25.3416653Z Selecting previously unselected package libfftw3-long3:amd64. 2021-05-16T17:32:25.3460932Z (Reading database ... 2021-05-16T17:32:25.3461711Z (Reading database ... 5% 2021-05-16T17:32:25.3462393Z (Reading database ... 10% 2021-05-16T17:32:25.3463049Z (Reading database ... 15% 2021-05-16T17:32:25.3463681Z (Reading database ... 20% 2021-05-16T17:32:25.3464325Z (Reading database ... 25% 2021-05-16T17:32:25.3464984Z (Reading database ... 30% 2021-05-16T17:32:25.3465667Z (Reading database ... 35% 2021-05-16T17:32:25.3466319Z (Reading database ... 40% 2021-05-16T17:32:25.3466944Z (Reading database ... 45% 2021-05-16T17:32:25.3467589Z (Reading database ... 50% 2021-05-16T17:32:25.3496898Z (Reading database ... 55% 2021-05-16T17:32:25.3531875Z (Reading database ... 60% 2021-05-16T17:32:25.3570018Z (Reading database ... 65% 2021-05-16T17:32:25.3682549Z (Reading database ... 70% 2021-05-16T17:32:25.3702858Z (Reading database ... 75% 2021-05-16T17:32:25.4028399Z (Reading database ... 80% 2021-05-16T17:32:25.4299061Z (Reading database ... 85% 2021-05-16T17:32:25.4427596Z (Reading database ... 90% 2021-05-16T17:32:25.4497623Z (Reading database ... 95% 2021-05-16T17:32:25.4498215Z (Reading database ... 100% 2021-05-16T17:32:25.4499033Z (Reading database ... 265059 files and directories currently installed.) 2021-05-16T17:32:25.4612359Z Preparing to unpack .../libfftw3-long3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-16T17:32:25.4628264Z Unpacking libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T17:32:25.5131143Z Selecting previously unselected package libfftw3-quad3:amd64. 2021-05-16T17:32:25.5404077Z Preparing to unpack .../libfftw3-quad3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-16T17:32:25.5418894Z Unpacking libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T17:32:25.6296909Z Selecting previously unselected package libfftw3-single3:amd64. 2021-05-16T17:32:25.6512253Z Preparing to unpack .../libfftw3-single3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-16T17:32:25.6519915Z Unpacking libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T17:32:25.7376526Z Selecting previously unselected package libfftw3-bin. 2021-05-16T17:32:25.7630580Z Preparing to unpack .../libfftw3-bin_3.3.8-2ubuntu1_amd64.deb ... 2021-05-16T17:32:25.7644373Z Unpacking libfftw3-bin (3.3.8-2ubuntu1) ... 2021-05-16T17:32:25.7935483Z Selecting previously unselected package libfftw3-dev:amd64. 2021-05-16T17:32:25.8151229Z Preparing to unpack .../libfftw3-dev_3.3.8-2ubuntu1_amd64.deb ... 2021-05-16T17:32:25.8161880Z Unpacking libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T17:32:26.0779434Z Setting up libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T17:32:26.0805339Z Setting up libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T17:32:26.0835496Z Setting up libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T17:32:26.0887501Z Setting up libfftw3-bin (3.3.8-2ubuntu1) ... 2021-05-16T17:32:26.0909051Z Setting up libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T17:32:26.0930826Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:32:26.8041476Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:32:28.6537432Z Reading package lists... 2021-05-16T17:32:28.7950242Z Building dependency tree... 2021-05-16T17:32:28.7966615Z Reading state information... 2021-05-16T17:32:28.9347654Z The following additional packages will be installed: 2021-05-16T17:32:28.9348821Z libdcmtk14 2021-05-16T17:32:28.9756403Z The following NEW packages will be installed: 2021-05-16T17:32:28.9760456Z dcmtk libdcmtk14 2021-05-16T17:32:28.9988359Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:32:28.9989052Z Need to get 5546 kB of archives. 2021-05-16T17:32:28.9989731Z After this operation, 26.5 MB of additional disk space will be used. 2021-05-16T17:32:28.9991466Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdcmtk14 amd64 3.6.4-2.1build2 [4682 kB] 2021-05-16T17:32:29.1723618Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 dcmtk amd64 3.6.4-2.1build2 [864 kB] 2021-05-16T17:32:29.5900395Z Fetched 5546 kB in 0s (23.1 MB/s) 2021-05-16T17:32:29.6192960Z Selecting previously unselected package libdcmtk14. 2021-05-16T17:32:29.6262582Z (Reading database ... 2021-05-16T17:32:29.6263300Z (Reading database ... 5% 2021-05-16T17:32:29.6263980Z (Reading database ... 10% 2021-05-16T17:32:29.6264610Z (Reading database ... 15% 2021-05-16T17:32:29.6265230Z (Reading database ... 20% 2021-05-16T17:32:29.6265873Z (Reading database ... 25% 2021-05-16T17:32:29.6266487Z (Reading database ... 30% 2021-05-16T17:32:29.6267114Z (Reading database ... 35% 2021-05-16T17:32:29.6267735Z (Reading database ... 40% 2021-05-16T17:32:29.6268343Z (Reading database ... 45% 2021-05-16T17:32:29.6268963Z (Reading database ... 50% 2021-05-16T17:32:29.6301017Z (Reading database ... 55% 2021-05-16T17:32:29.6333112Z (Reading database ... 60% 2021-05-16T17:32:29.6367190Z (Reading database ... 65% 2021-05-16T17:32:29.6475422Z (Reading database ... 70% 2021-05-16T17:32:29.6498941Z (Reading database ... 75% 2021-05-16T17:32:29.6817541Z (Reading database ... 80% 2021-05-16T17:32:29.7094906Z (Reading database ... 85% 2021-05-16T17:32:30.3175684Z (Reading database ... 90% 2021-05-16T17:32:30.3183141Z (Reading database ... 95% 2021-05-16T17:32:30.3184090Z (Reading database ... 100% 2021-05-16T17:32:30.3184849Z (Reading database ... 265150 files and directories currently installed.) 2021-05-16T17:32:30.3186415Z Preparing to unpack .../libdcmtk14_3.6.4-2.1build2_amd64.deb ... 2021-05-16T17:32:30.3187566Z Unpacking libdcmtk14 (3.6.4-2.1build2) ... 2021-05-16T17:32:30.3188252Z Selecting previously unselected package dcmtk. 2021-05-16T17:32:30.3189157Z Preparing to unpack .../dcmtk_3.6.4-2.1build2_amd64.deb ... 2021-05-16T17:32:30.3189903Z Unpacking dcmtk (3.6.4-2.1build2) ... 2021-05-16T17:32:30.3731957Z Setting up libdcmtk14 (3.6.4-2.1build2) ... 2021-05-16T17:32:30.3766286Z Setting up dcmtk (3.6.4-2.1build2) ... 2021-05-16T17:32:30.3909747Z Adding `dcmtk' group to system ... 2021-05-16T17:32:30.4399456Z Adding `dcmtk' user to system ... 2021-05-16T17:32:30.5290449Z adduser: Warning: The home directory `/var/lib/dcmtk/db' does not belong to the user you are currently creating. 2021-05-16T17:32:30.7678243Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:32:32.2230090Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:32:34.0603052Z Reading package lists... 2021-05-16T17:32:34.2021391Z Building dependency tree... 2021-05-16T17:32:34.2038040Z Reading state information... 2021-05-16T17:32:34.4082471Z libsecret-1-dev is already the newest version (0.20.3-0ubuntu1). 2021-05-16T17:32:34.4083712Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:32:34.4673552Z Reading package lists... 2021-05-16T17:32:34.6091612Z Building dependency tree... 2021-05-16T17:32:34.6108814Z Reading state information... 2021-05-16T17:32:34.8300456Z libpng-dev is already the newest version (1.6.37-2). 2021-05-16T17:32:34.8301558Z libpng-dev set to manually installed. 2021-05-16T17:32:34.8302414Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:32:34.8899326Z Reading package lists... 2021-05-16T17:32:35.0327768Z Building dependency tree... 2021-05-16T17:32:35.0346637Z Reading state information... 2021-05-16T17:32:35.1748735Z The following additional packages will be installed: 2021-05-16T17:32:35.1751033Z libopenjp2-7 libpoppler-cpp0v5 libpoppler-dev libpoppler97 poppler-data 2021-05-16T17:32:35.1755268Z Suggested packages: 2021-05-16T17:32:35.1756677Z poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho 2021-05-16T17:32:35.1758297Z fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai 2021-05-16T17:32:35.1759637Z fonts-arphic-uming fonts-nanum 2021-05-16T17:32:35.2181133Z The following NEW packages will be installed: 2021-05-16T17:32:35.2182672Z libopenjp2-7 libpoppler-cpp-dev libpoppler-cpp0v5 libpoppler-dev 2021-05-16T17:32:35.2189340Z libpoppler97 poppler-data 2021-05-16T17:32:35.2396349Z 0 upgraded, 6 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:32:35.2397018Z Need to get 2582 kB of archives. 2021-05-16T17:32:35.2397699Z After this operation, 16.7 MB of additional disk space will be used. 2021-05-16T17:32:35.2399158Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 poppler-data all 0.4.9-2 [1475 kB] 2021-05-16T17:32:35.2768467Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopenjp2-7 amd64 2.3.1-1ubuntu4.20.04.1 [141 kB] 2021-05-16T17:32:35.2786643Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler97 amd64 0.86.1-0ubuntu1 [915 kB] 2021-05-16T17:32:35.3055022Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp0v5 amd64 0.86.1-0ubuntu1 [35.6 kB] 2021-05-16T17:32:35.3087909Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-dev amd64 0.86.1-0ubuntu1 [5336 B] 2021-05-16T17:32:35.3471014Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp-dev amd64 0.86.1-0ubuntu1 [10.4 kB] 2021-05-16T17:32:35.7197090Z Fetched 2582 kB in 0s (20.8 MB/s) 2021-05-16T17:32:35.7496581Z Selecting previously unselected package poppler-data. 2021-05-16T17:32:35.7553760Z (Reading database ... 2021-05-16T17:32:35.7554290Z (Reading database ... 5% 2021-05-16T17:32:35.7554770Z (Reading database ... 10% 2021-05-16T17:32:35.7555239Z (Reading database ... 15% 2021-05-16T17:32:35.7555711Z (Reading database ... 20% 2021-05-16T17:32:35.7556353Z (Reading database ... 25% 2021-05-16T17:32:35.7556830Z (Reading database ... 30% 2021-05-16T17:32:35.7557285Z (Reading database ... 35% 2021-05-16T17:32:35.7557759Z (Reading database ... 40% 2021-05-16T17:32:35.7558230Z (Reading database ... 45% 2021-05-16T17:32:35.7558685Z (Reading database ... 50% 2021-05-16T17:32:35.7596872Z (Reading database ... 55% 2021-05-16T17:32:35.7632098Z (Reading database ... 60% 2021-05-16T17:32:35.7668461Z (Reading database ... 65% 2021-05-16T17:32:35.7781651Z (Reading database ... 70% 2021-05-16T17:32:35.7804451Z (Reading database ... 75% 2021-05-16T17:32:35.8130960Z (Reading database ... 80% 2021-05-16T17:32:35.8417767Z (Reading database ... 85% 2021-05-16T17:32:35.8550748Z (Reading database ... 90% 2021-05-16T17:32:35.8621657Z (Reading database ... 95% 2021-05-16T17:32:35.8622202Z (Reading database ... 100% 2021-05-16T17:32:35.8622928Z (Reading database ... 265385 files and directories currently installed.) 2021-05-16T17:32:35.8733212Z Preparing to unpack .../0-poppler-data_0.4.9-2_all.deb ... 2021-05-16T17:32:35.8747947Z Unpacking poppler-data (0.4.9-2) ... 2021-05-16T17:32:36.0976574Z Selecting previously unselected package libopenjp2-7:amd64. 2021-05-16T17:32:36.1161217Z Preparing to unpack .../1-libopenjp2-7_2.3.1-1ubuntu4.20.04.1_amd64.deb ... 2021-05-16T17:32:36.1176853Z Unpacking libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-05-16T17:32:36.1534949Z Selecting previously unselected package libpoppler97:amd64. 2021-05-16T17:32:36.1770565Z Preparing to unpack .../2-libpoppler97_0.86.1-0ubuntu1_amd64.deb ... 2021-05-16T17:32:36.1778323Z Unpacking libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T17:32:36.2856601Z Selecting previously unselected package libpoppler-cpp0v5:amd64. 2021-05-16T17:32:36.3090740Z Preparing to unpack .../3-libpoppler-cpp0v5_0.86.1-0ubuntu1_amd64.deb ... 2021-05-16T17:32:36.3099628Z Unpacking libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T17:32:36.3375971Z Selecting previously unselected package libpoppler-dev:amd64. 2021-05-16T17:32:36.3595925Z Preparing to unpack .../4-libpoppler-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-05-16T17:32:36.3603887Z Unpacking libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T17:32:36.3855520Z Selecting previously unselected package libpoppler-cpp-dev:amd64. 2021-05-16T17:32:36.4081552Z Preparing to unpack .../5-libpoppler-cpp-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-05-16T17:32:36.4088357Z Unpacking libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T17:32:36.4604593Z Setting up poppler-data (0.4.9-2) ... 2021-05-16T17:32:36.4694425Z Setting up libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-05-16T17:32:36.4713896Z Setting up libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T17:32:36.4732812Z Setting up libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T17:32:36.4752439Z Setting up libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T17:32:36.4768369Z Setting up libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T17:32:36.4797928Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-16T17:32:36.5106812Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:32:38.3715455Z Reading package lists... 2021-05-16T17:32:38.5124727Z Building dependency tree... 2021-05-16T17:32:38.5141237Z Reading state information... 2021-05-16T17:32:38.6495760Z The following additional packages will be installed: 2021-05-16T17:32:38.6497932Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libsz2 2021-05-16T17:32:38.6501947Z Suggested packages: 2021-05-16T17:32:38.6502800Z libhdf5-doc 2021-05-16T17:32:38.6922569Z The following NEW packages will be installed: 2021-05-16T17:32:38.6927804Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libhdf5-dev 2021-05-16T17:32:38.6931921Z libsz2 2021-05-16T17:32:38.7186518Z 0 upgraded, 7 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:32:38.7187248Z Need to get 4074 kB of archives. 2021-05-16T17:32:38.7187976Z After this operation, 17.6 MB of additional disk space will be used. 2021-05-16T17:32:38.7190237Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 hdf5-helpers amd64 1.10.4+repack-11ubuntu1 [13.6 kB] 2021-05-16T17:32:38.7255193Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec0 amd64 1.0.4-1 [19.1 kB] 2021-05-16T17:32:38.7323944Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsz2 amd64 1.0.4-1 [5188 B] 2021-05-16T17:32:38.7382914Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-103 amd64 1.10.4+repack-11ubuntu1 [1311 kB] 2021-05-16T17:32:38.7884342Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-cpp-103 amd64 1.10.4+repack-11ubuntu1 [120 kB] 2021-05-16T17:32:38.7988840Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec-dev amd64 1.0.4-1 [16.9 kB] 2021-05-16T17:32:38.8070893Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-dev amd64 1.10.4+repack-11ubuntu1 [2589 kB] 2021-05-16T17:32:39.3436439Z Fetched 4074 kB in 0s (17.5 MB/s) 2021-05-16T17:32:39.3737099Z Selecting previously unselected package hdf5-helpers. 2021-05-16T17:32:39.3768436Z (Reading database ... 2021-05-16T17:32:39.3769260Z (Reading database ... 5% 2021-05-16T17:32:39.3769906Z (Reading database ... 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2021-05-16T17:32:39.4890091Z (Reading database ... 265945 files and directories currently installed.) 2021-05-16T17:32:39.5011378Z Preparing to unpack .../0-hdf5-helpers_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-16T17:32:39.5022958Z Unpacking hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-05-16T17:32:39.5258078Z Selecting previously unselected package libaec0:amd64. 2021-05-16T17:32:39.5530908Z Preparing to unpack .../1-libaec0_1.0.4-1_amd64.deb ... 2021-05-16T17:32:39.5550004Z Unpacking libaec0:amd64 (1.0.4-1) ... 2021-05-16T17:32:39.5854965Z Selecting previously unselected package libsz2:amd64. 2021-05-16T17:32:39.6043828Z Preparing to unpack .../2-libsz2_1.0.4-1_amd64.deb ... 2021-05-16T17:32:39.6053685Z Unpacking libsz2:amd64 (1.0.4-1) ... 2021-05-16T17:32:39.6376609Z Selecting previously unselected package libhdf5-103:amd64. 2021-05-16T17:32:39.6588833Z Preparing to unpack .../3-libhdf5-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-16T17:32:39.6597468Z Unpacking libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-16T17:32:39.7976369Z Selecting previously unselected package libhdf5-cpp-103:amd64. 2021-05-16T17:32:39.8210148Z Preparing to unpack .../4-libhdf5-cpp-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-16T17:32:39.8221684Z Unpacking libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-16T17:32:39.8575311Z Selecting previously unselected package libaec-dev:amd64. 2021-05-16T17:32:39.8800277Z Preparing to unpack .../5-libaec-dev_1.0.4-1_amd64.deb ... 2021-05-16T17:32:39.8808971Z Unpacking libaec-dev:amd64 (1.0.4-1) ... 2021-05-16T17:32:39.9087400Z Selecting previously unselected package libhdf5-dev. 2021-05-16T17:32:39.9326733Z Preparing to unpack .../6-libhdf5-dev_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-16T17:32:39.9335937Z Unpacking libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-05-16T17:32:40.2226500Z Setting up hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-05-16T17:32:40.2251490Z Setting up libaec0:amd64 (1.0.4-1) ... 2021-05-16T17:32:40.2273145Z Setting up libsz2:amd64 (1.0.4-1) ... 2021-05-16T17:32:40.2292785Z Setting up libaec-dev:amd64 (1.0.4-1) ... 2021-05-16T17:32:40.2323537Z Setting up libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-16T17:32:40.2343714Z Setting up libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-16T17:32:40.2366151Z Setting up libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-05-16T17:32:40.2435368Z update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 2021-05-16T17:32:40.2457090Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:32:40.9304602Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:32:42.7838535Z Reading package lists... 2021-05-16T17:32:42.9246296Z Building dependency tree... 2021-05-16T17:32:42.9262581Z Reading state information... 2021-05-16T17:32:43.0633297Z The following additional packages will be installed: 2021-05-16T17:32:43.0636553Z libdrm-dev libgl-dev libglu1-mesa libglx-dev 2021-05-16T17:32:43.1056213Z The following NEW packages will be installed: 2021-05-16T17:32:43.1058157Z libdrm-dev libgl-dev libglu1-mesa libglu1-mesa-dev libglx-dev 2021-05-16T17:32:43.1059282Z mesa-common-dev 2021-05-16T17:32:43.1257139Z 0 upgraded, 6 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:32:43.1258646Z Need to get 1761 kB of archives. 2021-05-16T17:32:43.1259393Z After this operation, 5442 kB of additional disk space will be used. 2021-05-16T17:32:43.1261063Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libdrm-dev amd64 2.4.102-1ubuntu1~20.04.1 [126 kB] 2021-05-16T17:32:43.1308119Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libglx-dev amd64 1.3.2-1~ubuntu0.20.04.1 [14.0 kB] 2021-05-16T17:32:43.1314518Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [97.8 kB] 2021-05-16T17:32:43.1331351Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa amd64 9.0.1-1build1 [168 kB] 2021-05-16T17:32:43.1399650Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa-dev amd64 9.0.1-1build1 [207 kB] 2021-05-16T17:32:43.1420088Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-common-dev amd64 20.2.6-0ubuntu0.20.04.1 [1148 kB] 2021-05-16T17:32:43.5283275Z Fetched 1761 kB in 0s (36.1 MB/s) 2021-05-16T17:32:43.5538652Z Selecting previously unselected package libdrm-dev:amd64. 2021-05-16T17:32:43.5606024Z (Reading database ... 2021-05-16T17:32:43.5606690Z (Reading database ... 5% 2021-05-16T17:32:43.5607274Z (Reading database ... 10% 2021-05-16T17:32:43.5607851Z (Reading database ... 15% 2021-05-16T17:32:43.5608413Z (Reading database ... 20% 2021-05-16T17:32:43.5609021Z (Reading database ... 25% 2021-05-16T17:32:43.5609629Z (Reading database ... 30% 2021-05-16T17:32:43.5610198Z (Reading 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(2.4.102-1ubuntu1~20.04.1) ... 2021-05-16T17:32:43.7095972Z Selecting previously unselected package libglx-dev:amd64. 2021-05-16T17:32:43.7332054Z Preparing to unpack .../1-libglx-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T17:32:43.7340624Z Unpacking libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:32:43.7616014Z Selecting previously unselected package libgl-dev:amd64. 2021-05-16T17:32:43.7829677Z Preparing to unpack .../2-libgl-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T17:32:43.7837910Z Unpacking libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:32:43.8198067Z Selecting previously unselected package libglu1-mesa:amd64. 2021-05-16T17:32:43.8412745Z Preparing to unpack .../3-libglu1-mesa_9.0.1-1build1_amd64.deb ... 2021-05-16T17:32:43.8428805Z Unpacking libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-05-16T17:32:43.8855606Z Selecting previously unselected package libglu1-mesa-dev:amd64. 2021-05-16T17:32:43.9070953Z Preparing to unpack .../4-libglu1-mesa-dev_9.0.1-1build1_amd64.deb ... 2021-05-16T17:32:43.9077596Z Unpacking libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-05-16T17:32:43.9495741Z Selecting previously unselected package mesa-common-dev:amd64. 2021-05-16T17:32:43.9758741Z Preparing to unpack .../5-mesa-common-dev_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-16T17:32:43.9769150Z Unpacking mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T17:32:44.1272415Z Setting up libdrm-dev:amd64 (2.4.102-1ubuntu1~20.04.1) ... 2021-05-16T17:32:44.1293949Z Setting up libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:32:44.1319787Z Setting up libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-05-16T17:32:44.1343456Z Setting up libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:32:44.1365277Z Setting up libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-05-16T17:32:44.1385633Z Setting up mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T17:32:44.1408001Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:32:45.3994444Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:32:47.2556897Z Reading package lists... 2021-05-16T17:32:47.3986930Z Building dependency tree... 2021-05-16T17:32:47.4004553Z Reading state information... 2021-05-16T17:32:47.5368240Z The following additional packages will be installed: 2021-05-16T17:32:47.5370409Z libprotobuf-lite17 libprotoc17 2021-05-16T17:32:47.5803119Z The following NEW packages will be installed: 2021-05-16T17:32:47.5807982Z libprotobuf-dev libprotobuf-lite17 libprotoc-dev libprotoc17 2021-05-16T17:32:47.5811355Z protobuf-compiler 2021-05-16T17:32:47.6013175Z 0 upgraded, 5 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:32:47.6013808Z Need to get 2754 kB of archives. 2021-05-16T17:32:47.6014711Z After this operation, 19.9 MB of additional disk space will be used. 2021-05-16T17:32:47.6016269Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-lite17 amd64 3.6.1.3-2ubuntu5 [132 kB] 2021-05-16T17:32:47.6057468Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc17 amd64 3.6.1.3-2ubuntu5 [646 kB] 2021-05-16T17:32:47.6140023Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-dev amd64 3.6.1.3-2ubuntu5 [1155 kB] 2021-05-16T17:32:47.6258254Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc-dev amd64 3.6.1.3-2ubuntu5 [793 kB] 2021-05-16T17:32:47.6336078Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 protobuf-compiler amd64 3.6.1.3-2ubuntu5 [27.6 kB] 2021-05-16T17:32:48.0047037Z Fetched 2754 kB in 0s (56.7 MB/s) 2021-05-16T17:32:48.0376053Z Selecting previously unselected package libprotobuf-lite17:amd64. 2021-05-16T17:32:48.0389928Z (Reading database ... 2021-05-16T17:32:48.0390632Z (Reading database ... 5% 2021-05-16T17:32:48.0391511Z (Reading database ... 10% 2021-05-16T17:32:48.0392019Z (Reading database ... 15% 2021-05-16T17:32:48.0392468Z (Reading 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2021-05-16T17:32:48.1529387Z Preparing to unpack .../libprotobuf-lite17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-16T17:32:48.1545925Z Unpacking libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T17:32:48.1935482Z Selecting previously unselected package libprotoc17:amd64. 2021-05-16T17:32:48.2136808Z Preparing to unpack .../libprotoc17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-16T17:32:48.2145226Z Unpacking libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T17:32:48.3015734Z Selecting previously unselected package libprotobuf-dev:amd64. 2021-05-16T17:32:48.3203349Z Preparing to unpack .../libprotobuf-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-16T17:32:48.3214248Z Unpacking libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T17:32:48.4695603Z Selecting previously unselected package libprotoc-dev:amd64. 2021-05-16T17:32:48.4900946Z Preparing to unpack .../libprotoc-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-16T17:32:48.4917170Z Unpacking libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T17:32:48.5976505Z Selecting previously unselected package protobuf-compiler. 2021-05-16T17:32:48.6212988Z Preparing to unpack .../protobuf-compiler_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-16T17:32:48.6222736Z Unpacking protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-05-16T17:32:48.6781878Z Setting up libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T17:32:48.6802620Z Setting up protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-05-16T17:32:48.6831064Z Setting up libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T17:32:48.6861737Z Setting up libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T17:32:48.6879364Z Setting up libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T17:32:48.6900003Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:32:49.3522183Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:32:51.2247113Z Reading package lists... 2021-05-16T17:32:51.3724733Z Building dependency tree... 2021-05-16T17:32:51.3741473Z Reading state information... 2021-05-16T17:32:51.5126086Z The following additional packages will be installed: 2021-05-16T17:32:51.5129482Z i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 libasyncns0 2021-05-16T17:32:51.5135093Z libavc1394-0 libavcodec58 libavdevice58 libavfilter7 libavformat58 2021-05-16T17:32:51.5136270Z libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 libcaca0 2021-05-16T17:32:51.5137643Z libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 libcodec2-0.9 2021-05-16T17:32:51.5139016Z libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 libigdgmm11 2021-05-16T17:32:51.5140312Z libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-05-16T17:32:51.5141629Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-05-16T17:32:51.5142993Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-05-16T17:32:51.5144279Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-05-16T17:32:51.5145598Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-05-16T17:32:51.5147258Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-05-16T17:32:51.5148556Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-05-16T17:32:51.5149785Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-05-16T17:32:51.5150980Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-05-16T17:32:51.5151739Z Suggested packages: 2021-05-16T17:32:51.5152818Z ffmpeg-doc i965-va-driver-shaders libbluray-bdj jackd2 libportaudio2 2021-05-16T17:32:51.5154165Z opus-tools pulseaudio libraw1394-doc serdi sndiod sordi speex opencl-icd 2021-05-16T17:32:51.5155630Z libvdpau-va-gl1 nvidia-vdpau-driver nvidia-legacy-340xx-vdpau-driver 2021-05-16T17:32:51.5156951Z nvidia-legacy-304xx-vdpau-driver 2021-05-16T17:32:51.5815194Z The following NEW packages will be installed: 2021-05-16T17:32:51.5817506Z ffmpeg i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 2021-05-16T17:32:51.5819179Z libasyncns0 libavc1394-0 libavcodec58 libavdevice58 libavfilter7 2021-05-16T17:32:51.5820568Z libavformat58 libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 2021-05-16T17:32:51.5822168Z libcaca0 libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 2021-05-16T17:32:51.5823826Z libcodec2-0.9 libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 2021-05-16T17:32:51.5825429Z libigdgmm11 libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-05-16T17:32:51.5827070Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-05-16T17:32:51.5829021Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-05-16T17:32:51.5830564Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-05-16T17:32:51.5832133Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-05-16T17:32:51.5833748Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-05-16T17:32:51.5835249Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-05-16T17:32:51.5836754Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-05-16T17:32:51.5839449Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-05-16T17:32:51.6033673Z 0 upgraded, 76 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:32:51.6034388Z Need to get 47.1 MB of archives. 2021-05-16T17:32:51.6035066Z After this operation, 195 MB of additional disk space will be used. 2021-05-16T17:32:51.6036746Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaom0 amd64 1.0.0.errata1-3build1 [1160 kB] 2021-05-16T17:32:51.6192092Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva2 amd64 2.7.0-2 [53.5 kB] 2021-05-16T17:32:51.6199641Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-drm2 amd64 2.7.0-2 [7044 B] 2021-05-16T17:32:51.6204456Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-x11-2 amd64 2.7.0-2 [11.9 kB] 2021-05-16T17:32:51.6208950Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvdpau1 amd64 1.3-1ubuntu2 [25.6 kB] 2021-05-16T17:32:51.6216336Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1ubuntu1 [30.3 kB] 2021-05-16T17:32:51.6222581Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavutil56 amd64 7:4.2.4-1ubuntu0.1 [241 kB] 2021-05-16T17:32:51.6250627Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcodec2-0.9 amd64 0.9.2-2 [7886 kB] 2021-05-16T17:32:51.6858462Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgsm1 amd64 1.0.18-2 [24.4 kB] 2021-05-16T17:32:51.6864828Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmp3lame0 amd64 3.100-3 [133 kB] 2021-05-16T17:32:51.6877886Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libopus0 amd64 1.3.1-0ubuntu1 [191 kB] 2021-05-16T17:32:51.6895003Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libshine3 amd64 3.1.1-2 [23.2 kB] 2021-05-16T17:32:51.6900138Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsnappy1v5 amd64 1.1.8-1build1 [16.7 kB] 2021-05-16T17:32:51.6904982Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libspeex1 amd64 1.2~rc1.2-1.1ubuntu1 [53.2 kB] 2021-05-16T17:32:51.6913659Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsoxr0 amd64 0.1.3-2build1 [78.0 kB] 2021-05-16T17:32:51.6924045Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswresample3 amd64 7:4.2.4-1ubuntu0.1 [57.1 kB] 2021-05-16T17:32:51.6934255Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtheora0 amd64 1.1.1+dfsg.1-15ubuntu2 [162 kB] 2021-05-16T17:32:51.6949718Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtwolame0 amd64 0.4.0-2 [47.6 kB] 2021-05-16T17:32:51.6956824Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvorbisenc2 amd64 1.3.6-2ubuntu1 [70.7 kB] 2021-05-16T17:32:51.6966281Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwavpack1 amd64 5.2.0-1ubuntu0.1 [77.3 kB] 2021-05-16T17:32:51.6978148Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx264-155 amd64 2:0.155.2917+git0a84d98-2 [521 kB] 2021-05-16T17:32:51.7020476Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx265-179 amd64 3.2.1-1build1 [1060 kB] 2021-05-16T17:32:51.7103433Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxvidcore4 amd64 2:1.3.7-1 [201 kB] 2021-05-16T17:32:51.7123049Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi-common all 0.2.35-17 [32.5 kB] 2021-05-16T17:32:51.7127964Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi0 amd64 0.2.35-17 [237 kB] 2021-05-16T17:32:51.7150445Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavcodec58 amd64 7:4.2.4-1ubuntu0.1 [4876 kB] 2021-05-16T17:32:51.7624880Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libraw1394-11 amd64 2.1.2-1 [30.7 kB] 2021-05-16T17:32:51.7628922Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavc1394-0 amd64 0.5.4-5 [16.2 kB] 2021-05-16T17:32:51.7633127Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libass9 amd64 1:0.14.0-2 [88.0 kB] 2021-05-16T17:32:51.7647170Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbluray2 amd64 1:1.2.0-1 [138 kB] 2021-05-16T17:32:51.7658290Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libchromaprint1 amd64 1.4.3-3build1 [37.6 kB] 2021-05-16T17:32:51.7664296Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgme0 amd64 0.6.2-1build1 [123 kB] 2021-05-16T17:32:51.7676523Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmpg123-0 amd64 1.25.13-1 [124 kB] 2021-05-16T17:32:51.7688853Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenmpt0 amd64 0.4.11-1build1 [599 kB] 2021-05-16T17:32:51.7738585Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-gcrypt-4 amd64 0.9.3-2ubuntu2.1 [201 kB] 2021-05-16T17:32:51.7762815Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavformat58 amd64 7:4.2.4-1ubuntu0.1 [981 kB] 2021-05-16T17:32:51.7859140Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbs2b0 amd64 3.1.0+dfsg-2.2build1 [10.2 kB] 2021-05-16T17:32:51.7864407Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libflite1 amd64 2.1-release-3 [12.8 MB] 2021-05-16T17:32:51.8830603Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libserd-0-0 amd64 0.30.2-1 [46.6 kB] 2021-05-16T17:32:51.8837763Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsord-0-0 amd64 0.16.4-1 [19.5 kB] 2021-05-16T17:32:51.8844445Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsratom-0-0 amd64 0.6.4-1 [16.9 kB] 2021-05-16T17:32:51.8846393Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 liblilv-0-0 amd64 0.24.6-1ubuntu0.1 [40.6 kB] 2021-05-16T17:32:51.8854641Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmysofa1 amd64 1.0~dfsg0-1 [39.2 kB] 2021-05-16T17:32:51.8856715Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libpostproc55 amd64 7:4.2.4-1ubuntu0.1 [55.3 kB] 2021-05-16T17:32:51.8862679Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsamplerate0 amd64 0.1.9-2 [939 kB] 2021-05-16T17:32:51.8934651Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 librubberband2 amd64 1.8.2-1build1 [89.4 kB] 2021-05-16T17:32:51.8943525Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswscale5 amd64 7:4.2.4-1ubuntu0.1 [156 kB] 2021-05-16T17:32:51.8963352Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libvidstab1.1 amd64 1.1.0-2 [35.0 kB] 2021-05-16T17:32:51.8968443Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavfilter7 amd64 7:4.2.4-1ubuntu0.1 [1084 kB] 2021-05-16T17:32:51.9075158Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcaca0 amd64 0.99.beta19-2.1ubuntu1.20.04.1 [202 kB] 2021-05-16T17:32:51.9096654Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio18 amd64 2.0.0-2 [58.6 kB] 2021-05-16T17:32:51.9101503Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-cdda2 amd64 10.2+2.0.0-1 [17.6 kB] 2021-05-16T17:32:51.9106423Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-paranoia2 amd64 10.2+2.0.0-1 [16.2 kB] 2021-05-16T17:32:51.9111399Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdc1394-22 amd64 2.2.5-2.1 [79.6 kB] 2021-05-16T17:32:51.9118235Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libiec61883-0 amd64 1.2.0-3 [24.3 kB] 2021-05-16T17:32:51.9123101Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjack-jackd2-0 amd64 1.9.12~dfsg-2ubuntu2 [267 kB] 2021-05-16T17:32:51.9146334Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal-data all 1:1.19.1-1 [162 kB] 2021-05-16T17:32:51.9161611Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsndio7.0 amd64 1.5.0-3 [24.5 kB] 2021-05-16T17:32:51.9166334Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal1 amd64 1:1.19.1-1 [492 kB] 2021-05-16T17:32:51.9208961Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasyncns0 amd64 0.8-6 [12.1 kB] 2021-05-16T17:32:51.9210483Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libflac8 amd64 1.3.3-1build1 [103 kB] 2021-05-16T17:32:52.8229150Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsndfile1 amd64 1.0.28-7 [170 kB] 2021-05-16T17:32:52.8231462Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libpulse0 amd64 1:13.99.1-1ubuntu3.10 [262 kB] 2021-05-16T17:32:52.8233331Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsdl2-2.0-0 amd64 2.0.10+dfsg1-3 [407 kB] 2021-05-16T17:32:52.8235263Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavdevice58 amd64 7:4.2.4-1ubuntu0.1 [74.3 kB] 2021-05-16T17:32:52.8237234Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavresample4 amd64 7:4.2.4-1ubuntu0.1 [54.2 kB] 2021-05-16T17:32:52.8239163Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 ffmpeg amd64 7:4.2.4-1ubuntu0.1 [1453 kB] 2021-05-16T17:32:52.8240969Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libigdgmm11 amd64 20.1.1+ds1-1 [111 kB] 2021-05-16T17:32:52.8243619Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 intel-media-va-driver amd64 20.1.1+dfsg1-1 [1764 kB] 2021-05-16T17:32:52.8245199Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaacs0 amd64 0.9.0-2 [50.1 kB] 2021-05-16T17:32:52.8246684Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbdplus0 amd64 0.1.2-3 [47.3 kB] 2021-05-16T17:32:52.8248525Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 mesa-va-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2618 kB] 2021-05-16T17:32:52.8251232Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-vdpau-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2744 kB] 2021-05-16T17:32:52.8252925Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 i965-va-driver amd64 2.4.0-0ubuntu1 [924 kB] 2021-05-16T17:32:52.8255244Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 va-driver-all amd64 2.7.0-2 [4020 B] 2021-05-16T17:32:52.8256851Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 vdpau-driver-all amd64 1.3-1ubuntu2 [4596 B] 2021-05-16T17:32:52.8257720Z Fetched 47.1 MB in 0s (109 MB/s) 2021-05-16T17:32:52.8258373Z Selecting previously unselected package libaom0:amd64. 2021-05-16T17:32:52.8258968Z (Reading database ... 2021-05-16T17:32:52.8259408Z (Reading database ... 5% 2021-05-16T17:32:52.8259869Z (Reading database ... 10% 2021-05-16T17:32:52.8260317Z (Reading database ... 15% 2021-05-16T17:32:52.8260780Z (Reading database ... 20% 2021-05-16T17:32:52.8261223Z (Reading database ... 25% 2021-05-16T17:32:52.8261678Z (Reading database ... 30% 2021-05-16T17:32:52.8262121Z (Reading database ... 35% 2021-05-16T17:32:52.8262576Z (Reading database ... 40% 2021-05-16T17:32:52.8263018Z (Reading database ... 45% 2021-05-16T17:32:52.8263471Z (Reading database ... 50% 2021-05-16T17:32:52.8263925Z (Reading database ... 55% 2021-05-16T17:32:52.8264500Z (Reading database ... 60% 2021-05-16T17:32:52.8264954Z (Reading database ... 65% 2021-05-16T17:32:52.8265394Z (Reading database ... 70% 2021-05-16T17:32:52.8265845Z (Reading database ... 75% 2021-05-16T17:32:52.8266283Z (Reading database ... 80% 2021-05-16T17:32:52.8266741Z (Reading database ... 85% 2021-05-16T17:32:52.8267179Z (Reading database ... 90% 2021-05-16T17:32:52.8267630Z (Reading database ... 95% 2021-05-16T17:32:52.8268076Z (Reading database ... 100% 2021-05-16T17:32:52.8268778Z (Reading database ... 266807 files and directories currently installed.) 2021-05-16T17:32:52.8269833Z Preparing to unpack .../00-libaom0_1.0.0.errata1-3build1_amd64.deb ... 2021-05-16T17:32:52.8270731Z Unpacking libaom0:amd64 (1.0.0.errata1-3build1) ... 2021-05-16T17:32:52.8317954Z Selecting previously unselected package libva2:amd64. 2021-05-16T17:32:52.8551611Z Preparing to unpack .../01-libva2_2.7.0-2_amd64.deb ... 2021-05-16T17:32:52.8564469Z Unpacking libva2:amd64 (2.7.0-2) ... 2021-05-16T17:32:52.8803560Z Selecting previously unselected package libva-drm2:amd64. 2021-05-16T17:32:52.9075964Z Preparing to unpack .../02-libva-drm2_2.7.0-2_amd64.deb ... 2021-05-16T17:32:52.9088792Z Unpacking libva-drm2:amd64 (2.7.0-2) ... 2021-05-16T17:32:52.9335778Z Selecting previously unselected package libva-x11-2:amd64. 2021-05-16T17:32:52.9580272Z Preparing to unpack .../03-libva-x11-2_2.7.0-2_amd64.deb ... 2021-05-16T17:32:52.9589856Z Unpacking libva-x11-2:amd64 (2.7.0-2) ... 2021-05-16T17:32:52.9895350Z Selecting previously unselected package libvdpau1:amd64. 2021-05-16T17:32:53.0081831Z Preparing to unpack .../04-libvdpau1_1.3-1ubuntu2_amd64.deb ... 2021-05-16T17:32:53.0093813Z Unpacking libvdpau1:amd64 (1.3-1ubuntu2) ... 2021-05-16T17:32:53.0375976Z Selecting previously unselected package ocl-icd-libopencl1:amd64. 2021-05-16T17:32:53.0623876Z Preparing to unpack .../05-ocl-icd-libopencl1_2.2.11-1ubuntu1_amd64.deb ... 2021-05-16T17:32:53.0634823Z Unpacking ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... 2021-05-16T17:32:53.0905357Z Selecting previously unselected package libavutil56:amd64. 2021-05-16T17:32:53.1176546Z Preparing to unpack .../06-libavutil56_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-05-16T17:32:53.1199139Z Unpacking libavutil56:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T17:32:53.1695312Z Selecting previously unselected package libcodec2-0.9:amd64. 2021-05-16T17:32:53.1896520Z Preparing to unpack .../07-libcodec2-0.9_0.9.2-2_amd64.deb ... 2021-05-16T17:32:53.1914518Z Unpacking libcodec2-0.9:amd64 (0.9.2-2) ... 2021-05-16T17:32:53.8470555Z Selecting previously unselected package libgsm1:amd64. 2021-05-16T17:32:53.8712304Z Preparing to unpack .../08-libgsm1_1.0.18-2_amd64.deb ... 2021-05-16T17:32:53.8721606Z Unpacking libgsm1:amd64 (1.0.18-2) ... 2021-05-16T17:32:53.9055881Z Selecting previously unselected package libmp3lame0:amd64. 2021-05-16T17:32:53.9267316Z Preparing to unpack .../09-libmp3lame0_3.100-3_amd64.deb ... 2021-05-16T17:32:53.9286865Z Unpacking libmp3lame0:amd64 (3.100-3) ... 2021-05-16T17:32:53.9615294Z Selecting previously unselected package libopus0:amd64. 2021-05-16T17:32:53.9873742Z Preparing to unpack .../10-libopus0_1.3.1-0ubuntu1_amd64.deb ... 2021-05-16T17:32:53.9881815Z Unpacking libopus0:amd64 (1.3.1-0ubuntu1) ... 2021-05-16T17:32:54.0255368Z Selecting previously unselected package libshine3:amd64. 2021-05-16T17:32:54.0524177Z Preparing to unpack .../11-libshine3_3.1.1-2_amd64.deb ... 2021-05-16T17:32:54.0547010Z Unpacking libshine3:amd64 (3.1.1-2) ... 2021-05-16T17:32:54.0815354Z Selecting previously unselected package libsnappy1v5:amd64. 2021-05-16T17:32:54.1033244Z Preparing to unpack .../12-libsnappy1v5_1.1.8-1build1_amd64.deb ... 2021-05-16T17:32:54.1055963Z Unpacking libsnappy1v5:amd64 (1.1.8-1build1) ... 2021-05-16T17:32:54.1282550Z Selecting previously unselected package libspeex1:amd64. 2021-05-16T17:32:54.1556145Z Preparing to unpack .../13-libspeex1_1.2~rc1.2-1.1ubuntu1_amd64.deb ... 2021-05-16T17:32:54.1564402Z Unpacking libspeex1:amd64 (1.2~rc1.2-1.1ubuntu1) ... 2021-05-16T17:32:54.1935034Z Selecting previously unselected package libsoxr0:amd64. 2021-05-16T17:32:54.2132534Z Preparing to unpack .../14-libsoxr0_0.1.3-2build1_amd64.deb ... 2021-05-16T17:32:54.2167543Z Unpacking libsoxr0:amd64 (0.1.3-2build1) ... 2021-05-16T17:32:54.2501966Z Selecting previously unselected package libswresample3:amd64. 2021-05-16T17:32:54.2745270Z Preparing to unpack .../15-libswresample3_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-05-16T17:32:54.2755414Z Unpacking libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T17:32:54.3094754Z Selecting previously unselected package libtheora0:amd64. 2021-05-16T17:32:54.3322550Z Preparing to unpack .../16-libtheora0_1.1.1+dfsg.1-15ubuntu2_amd64.deb ... 2021-05-16T17:32:54.3330603Z Unpacking libtheora0:amd64 (1.1.1+dfsg.1-15ubuntu2) ... 2021-05-16T17:32:54.3733119Z Selecting previously unselected package libtwolame0:amd64. 2021-05-16T17:32:54.4006893Z Preparing to unpack .../17-libtwolame0_0.4.0-2_amd64.deb ... 2021-05-16T17:32:54.4014464Z Unpacking libtwolame0:amd64 (0.4.0-2) ... 2021-05-16T17:32:54.4319955Z Selecting previously unselected package libvorbisenc2:amd64. 2021-05-16T17:32:54.4547974Z Preparing to unpack .../18-libvorbisenc2_1.3.6-2ubuntu1_amd64.deb ... 2021-05-16T17:32:54.4555155Z Unpacking libvorbisenc2:amd64 (1.3.6-2ubuntu1) ... 2021-05-16T17:32:54.4934803Z Selecting previously unselected package libwavpack1:amd64. 2021-05-16T17:32:54.5136912Z Preparing to unpack .../19-libwavpack1_5.2.0-1ubuntu0.1_amd64.deb ... 2021-05-16T17:32:54.5152849Z Unpacking libwavpack1:amd64 (5.2.0-1ubuntu0.1) ... 2021-05-16T17:32:54.5424653Z Selecting previously unselected package libx264-155:amd64. 2021-05-16T17:32:54.5695456Z Preparing to unpack .../20-libx264-155_2%3a0.155.2917+git0a84d98-2_amd64.deb ... 2021-05-16T17:32:54.5704349Z Unpacking libx264-155:amd64 (2:0.155.2917+git0a84d98-2) ... 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... 2021-05-16T17:33:00.6623374Z Setting up libflac8:amd64 (1.3.3-1build1) ... 2021-05-16T17:33:00.6643644Z Setting up libass9:amd64 (1:0.14.0-2) ... 2021-05-16T17:33:00.6662222Z Setting up libva2:amd64 (2.7.0-2) ... 2021-05-16T17:33:00.6682205Z Setting up libigdgmm11:amd64 (20.1.1+ds1-1) ... 2021-05-16T17:33:00.6707969Z Setting up libcodec2-0.9:amd64 (0.9.2-2) ... 2021-05-16T17:33:00.6736244Z Setting up libopus0:amd64 (1.3.1-0ubuntu1) ... 2021-05-16T17:33:00.6759326Z Setting up intel-media-va-driver:amd64 (20.1.1+dfsg1-1) ... 2021-05-16T17:33:00.6777345Z Setting up libaacs0:amd64 (0.9.0-2) ... 2021-05-16T17:33:00.6801514Z Setting up libsndio7.0:amd64 (1.5.0-3) ... 2021-05-16T17:33:00.6823139Z Setting up libbdplus0:amd64 (0.1.2-3) ... 2021-05-16T17:33:00.6838792Z Setting up libvidstab1.1:amd64 (1.1.0-2) ... 2021-05-16T17:33:00.6858455Z Setting up libflite1:amd64 (2.1-release-3) ... 2021-05-16T17:33:00.6879077Z Setting up libva-drm2:amd64 (2.7.0-2) ... 2021-05-16T17:33:00.6898070Z Setting up ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... 2021-05-16T17:33:00.6917255Z Setting up libasyncns0:amd64 (0.8-6) ... 2021-05-16T17:33:00.6938938Z Setting up libvdpau1:amd64 (1.3-1ubuntu2) ... 2021-05-16T17:33:00.6964427Z Setting up libwavpack1:amd64 (5.2.0-1ubuntu0.1) ... 2021-05-16T17:33:00.6981748Z Setting up libbs2b0:amd64 (3.1.0+dfsg-2.2build1) ... 2021-05-16T17:33:00.7002131Z Setting up libtheora0:amd64 (1.1.1+dfsg.1-15ubuntu2) ... 2021-05-16T17:33:00.7018548Z Setting up libopenal-data (1:1.19.1-1) ... 2021-05-16T17:33:00.7056327Z Setting up mesa-va-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T17:33:00.7074043Z Setting up libbluray2:amd64 (1:1.2.0-1) ... 2021-05-16T17:33:00.7101666Z Setting up libsamplerate0:amd64 (0.1.9-2) ... 2021-05-16T17:33:00.7337974Z Setting up libva-x11-2:amd64 (2.7.0-2) ... 2021-05-16T17:33:00.7363509Z Setting up libopenmpt0:amd64 (0.4.11-1build1) ... 2021-05-16T17:33:00.7395705Z Setting up libzvbi-common (0.2.35-17) ... 2021-05-16T17:33:00.7430962Z Setting up libmp3lame0:amd64 (3.100-3) ... 2021-05-16T17:33:00.7449961Z Setting up i965-va-driver:amd64 (2.4.0-0ubuntu1) ... 2021-05-16T17:33:00.7474461Z Setting up libvorbisenc2:amd64 (1.3.6-2ubuntu1) ... 2021-05-16T17:33:00.7494129Z Setting up libiec61883-0:amd64 (1.2.0-3) ... 2021-05-16T17:33:00.7514079Z Setting up libserd-0-0:amd64 (0.30.2-1) ... 2021-05-16T17:33:00.7532491Z Setting up libavc1394-0:amd64 (0.5.4-5) ... 2021-05-16T17:33:00.7551212Z Setting up mesa-vdpau-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T17:33:00.7575245Z Setting up libzvbi0:amd64 (0.2.35-17) ... 2021-05-16T17:33:00.7593118Z Setting up libcdio-cdda2:amd64 (10.2+2.0.0-1) ... 2021-05-16T17:33:00.7611368Z Setting up libcdio-paranoia2:amd64 (10.2+2.0.0-1) ... 2021-05-16T17:33:00.7628773Z Setting up libopenal1:amd64 (1:1.19.1-1) ... 2021-05-16T17:33:00.7647609Z Setting up libavutil56:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T17:33:00.7667703Z Setting up va-driver-all:amd64 (2.7.0-2) ... 2021-05-16T17:33:00.7692764Z Setting up libpostproc55:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T17:33:00.7715705Z Setting up librubberband2:amd64 (1.8.2-1build1) ... 2021-05-16T17:33:00.7741255Z Setting up libjack-jackd2-0:amd64 (1.9.12~dfsg-2ubuntu2) ... 2021-05-16T17:33:00.7759132Z Setting up vdpau-driver-all:amd64 (1.3-1ubuntu2) ... 2021-05-16T17:33:00.7775537Z Setting up libsord-0-0:amd64 (0.16.4-1) ... 2021-05-16T17:33:00.7804112Z Setting up libsratom-0-0:amd64 (0.6.4-1) ... 2021-05-16T17:33:00.7823721Z Setting up libswscale5:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T17:33:00.7841748Z Setting up libsndfile1:amd64 (1.0.28-7) ... 2021-05-16T17:33:00.7859802Z Setting up liblilv-0-0:amd64 (0.24.6-1ubuntu0.1) ... 2021-05-16T17:33:00.7879573Z Setting up libpulse0:amd64 (1:13.99.1-1ubuntu3.10) ... 2021-05-16T17:33:00.7953484Z Setting up libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T17:33:00.7981466Z Setting up libavresample4:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T17:33:00.8007684Z Setting up libavcodec58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T17:33:00.8024870Z Setting up libsdl2-2.0-0:amd64 (2.0.10+dfsg1-3) ... 2021-05-16T17:33:00.8044647Z Setting up libchromaprint1:amd64 (1.4.3-3build1) ... 2021-05-16T17:33:00.8062639Z Setting up libavformat58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T17:33:00.8079928Z Setting up libavfilter7:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T17:33:00.8105566Z Setting up libavdevice58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T17:33:00.8121678Z Setting up ffmpeg (7:4.2.4-1ubuntu0.1) ... 2021-05-16T17:33:00.8199645Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:33:01.7820033Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:33:03.6486699Z Reading package lists... 2021-05-16T17:33:03.7912410Z Building dependency tree... 2021-05-16T17:33:03.7930040Z Reading state information... 2021-05-16T17:33:03.9305385Z The following additional packages will be installed: 2021-05-16T17:33:03.9307778Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-05-16T17:33:03.9754482Z The following NEW packages will be installed: 2021-05-16T17:33:03.9755958Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-05-16T17:33:03.9756951Z libmagick++-dev 2021-05-16T17:33:04.0170709Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:33:04.0171485Z Need to get 309 kB of archives. 2021-05-16T17:33:04.0172497Z After this operation, 2202 kB of additional disk space will be used. 2021-05-16T17:33:04.0175067Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6-headers all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [47.5 kB] 2021-05-16T17:33:04.0224243Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-8 amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [133 kB] 2021-05-16T17:33:04.0305460Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-dev amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [127 kB] 2021-05-16T17:33:04.0424381Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-dev all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [1404 B] 2021-05-16T17:33:04.4181635Z Fetched 309 kB in 0s (4925 kB/s) 2021-05-16T17:33:04.4496958Z Selecting previously unselected package libmagick++-6-headers. 2021-05-16T17:33:04.4543744Z (Reading database ... 2021-05-16T17:33:04.4544300Z (Reading database ... 5% 2021-05-16T17:33:04.4544794Z (Reading database ... 10% 2021-05-16T17:33:04.4545241Z (Reading database ... 15% 2021-05-16T17:33:04.4545696Z (Reading database ... 20% 2021-05-16T17:33:04.4546139Z (Reading database ... 25% 2021-05-16T17:33:04.4546590Z (Reading database ... 30% 2021-05-16T17:33:04.4547030Z (Reading database ... 35% 2021-05-16T17:33:04.4547482Z (Reading database ... 40% 2021-05-16T17:33:04.4548099Z (Reading database ... 45% 2021-05-16T17:33:04.4548551Z (Reading database ... 50% 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Preparing to unpack .../libmagick++-6.q16-8_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-05-16T17:33:04.6337070Z Unpacking libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T17:33:04.6735469Z Selecting previously unselected package libmagick++-6.q16-dev:amd64. 2021-05-16T17:33:04.6955805Z Preparing to unpack .../libmagick++-6.q16-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-05-16T17:33:04.6976956Z Unpacking libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T17:33:04.7415904Z Selecting previously unselected package libmagick++-dev. 2021-05-16T17:33:04.7631685Z Preparing to unpack .../libmagick++-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_all.deb ... 2021-05-16T17:33:04.7705040Z Unpacking libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T17:33:04.8222901Z Setting up libmagick++-6-headers (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T17:33:04.8313928Z Setting up libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T17:33:04.8345517Z Setting up libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T17:33:04.8365878Z Setting up libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T17:33:04.8440764Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:33:06.7034546Z Reading package lists... 2021-05-16T17:33:06.8535368Z Building dependency tree... 2021-05-16T17:33:06.8553516Z Reading state information... 2021-05-16T17:33:06.9914126Z imagemagick is already the newest version (8:6.9.10.23+dfsg-2.1ubuntu11.2). 2021-05-16T17:33:06.9916078Z The following additional packages will be installed: 2021-05-16T17:33:06.9917841Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 libgs9 libgs9-common 2021-05-16T17:33:06.9919192Z libijs-0.35 libjbig2dec0 2021-05-16T17:33:06.9921242Z Suggested packages: 2021-05-16T17:33:06.9922594Z fonts-noto fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre 2021-05-16T17:33:06.9923791Z ghostscript-x 2021-05-16T17:33:07.0375987Z The following NEW packages will be installed: 2021-05-16T17:33:07.0378199Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 ghostscript libgs9 2021-05-16T17:33:07.0380937Z libgs9-common libijs-0.35 libjbig2dec0 2021-05-16T17:33:07.0575780Z 0 upgraded, 8 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:33:07.0577320Z Need to get 11.2 MB of archives. 2021-05-16T17:33:07.0578037Z After this operation, 39.1 MB of additional disk space will be used. 2021-05-16T17:33:07.0579934Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-droid-fallback all 1:6.0.1r16-1.1 [1805 kB] 2021-05-16T17:33:07.0915970Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 fonts-noto-mono all 20200323-1build1~ubuntu20.04.1 [80.6 kB] 2021-05-16T17:33:07.0930005Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-urw-base35 all 20170801.1-3 [6333 kB] 2021-05-16T17:33:07.2174417Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9-common all 9.50~dfsg-5ubuntu4.2 [681 kB] 2021-05-16T17:33:07.2396608Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libijs-0.35 amd64 0.35-15 [15.7 kB] 2021-05-16T17:33:07.2401776Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjbig2dec0 amd64 0.18-1ubuntu1 [60.0 kB] 2021-05-16T17:33:07.2411180Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9 amd64 9.50~dfsg-5ubuntu4.2 [2172 kB] 2021-05-16T17:33:07.2754993Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 ghostscript amd64 9.50~dfsg-5ubuntu4.2 [51.6 kB] 2021-05-16T17:33:07.6619971Z Fetched 11.2 MB in 0s (47.8 MB/s) 2021-05-16T17:33:07.6976973Z Selecting previously unselected package fonts-droid-fallback. 2021-05-16T17:33:07.6998144Z (Reading database ... 2021-05-16T17:33:07.6998756Z (Reading database ... 5% 2021-05-16T17:33:07.6999321Z (Reading 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... 100% 2021-05-16T17:33:07.8049142Z (Reading database ... 267393 files and directories currently installed.) 2021-05-16T17:33:07.8152257Z Preparing to unpack .../0-fonts-droid-fallback_1%3a6.0.1r16-1.1_all.deb ... 2021-05-16T17:33:07.8374223Z Unpacking fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-05-16T17:33:08.0296376Z Selecting previously unselected package fonts-noto-mono. 2021-05-16T17:33:08.0512290Z Preparing to unpack .../1-fonts-noto-mono_20200323-1build1~ubuntu20.04.1_all.deb ... 2021-05-16T17:33:08.0526289Z Unpacking fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-05-16T17:33:08.0809072Z Selecting previously unselected package fonts-urw-base35. 2021-05-16T17:33:08.1086123Z Preparing to unpack .../2-fonts-urw-base35_20170801.1-3_all.deb ... 2021-05-16T17:33:08.1663399Z Unpacking fonts-urw-base35 (20170801.1-3) ... 2021-05-16T17:33:08.5376897Z Selecting previously unselected package libgs9-common. 2021-05-16T17:33:08.5583767Z Preparing to unpack .../3-libgs9-common_9.50~dfsg-5ubuntu4.2_all.deb ... 2021-05-16T17:33:08.5594394Z Unpacking libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-05-16T17:33:08.6496206Z Selecting previously unselected package libijs-0.35:amd64. 2021-05-16T17:33:08.6769725Z Preparing to unpack .../4-libijs-0.35_0.35-15_amd64.deb ... 2021-05-16T17:33:08.6790941Z Unpacking libijs-0.35:amd64 (0.35-15) ... 2021-05-16T17:33:08.7095155Z Selecting previously unselected package libjbig2dec0:amd64. 2021-05-16T17:33:08.7296948Z Preparing to unpack .../5-libjbig2dec0_0.18-1ubuntu1_amd64.deb ... 2021-05-16T17:33:08.7308378Z Unpacking libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-05-16T17:33:08.7656334Z Selecting previously unselected package libgs9:amd64. 2021-05-16T17:33:08.7867718Z Preparing to unpack .../6-libgs9_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-05-16T17:33:08.7880013Z Unpacking libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-05-16T17:33:09.0483950Z Selecting previously unselected package ghostscript. 2021-05-16T17:33:09.0761293Z Preparing to unpack .../7-ghostscript_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-05-16T17:33:09.0769376Z Unpacking ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-05-16T17:33:09.1375922Z Setting up fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-05-16T17:33:09.1416672Z Setting up libijs-0.35:amd64 (0.35-15) ... 2021-05-16T17:33:09.1435614Z Setting up fonts-urw-base35 (20170801.1-3) ... 2021-05-16T17:33:09.1993982Z Setting up libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-05-16T17:33:09.2014644Z Setting up fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-05-16T17:33:09.2233202Z Setting up libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-05-16T17:33:09.2254219Z Setting up libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-05-16T17:33:09.2272657Z Setting up ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-05-16T17:33:09.2376095Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-16T17:33:09.3329032Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:33:09.3507160Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:33:12.1854747Z Reading package lists... 2021-05-16T17:33:12.3281234Z Building dependency tree... 2021-05-16T17:33:12.3298580Z Reading state information... 2021-05-16T17:33:12.4661141Z The following additional packages will be installed: 2021-05-16T17:33:12.4663303Z libudunits2-0 libudunits2-data 2021-05-16T17:33:12.5078043Z The following NEW packages will be installed: 2021-05-16T17:33:12.5080526Z libudunits2-0 libudunits2-data libudunits2-dev 2021-05-16T17:33:12.5271212Z 0 upgraded, 3 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:33:12.5272013Z Need to get 429 kB of archives. 2021-05-16T17:33:12.5272709Z After this operation, 1026 kB of additional disk space will be used. 2021-05-16T17:33:12.5275727Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-data all 2.2.26-5 [18.8 kB] 2021-05-16T17:33:12.5300728Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-0 amd64 2.2.26-5 [48.9 kB] 2021-05-16T17:33:12.5306432Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-dev amd64 2.2.26-5 [362 kB] 2021-05-16T17:33:12.9139326Z Fetched 429 kB in 0s (16.2 MB/s) 2021-05-16T17:33:12.9409207Z Selecting previously unselected package libudunits2-data. 2021-05-16T17:33:12.9479792Z (Reading database ... 2021-05-16T17:33:12.9480548Z (Reading database ... 5% 2021-05-16T17:33:12.9481204Z (Reading database ... 10% 2021-05-16T17:33:12.9481831Z (Reading database ... 15% 2021-05-16T17:33:12.9482475Z (Reading database ... 20% 2021-05-16T17:33:12.9483103Z (Reading database ... 25% 2021-05-16T17:33:12.9483715Z (Reading database ... 30% 2021-05-16T17:33:12.9484349Z (Reading database ... 35% 2021-05-16T17:33:12.9484961Z (Reading database ... 40% 2021-05-16T17:33:12.9485745Z (Reading database ... 45% 2021-05-16T17:33:12.9486400Z (Reading database ... 50% 2021-05-16T17:33:12.9509134Z (Reading database ... 55% 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(2.2.26-5) ... 2021-05-16T17:33:13.1404864Z Selecting previously unselected package libudunits2-dev:amd64. 2021-05-16T17:33:13.1672150Z Preparing to unpack .../libudunits2-dev_2.2.26-5_amd64.deb ... 2021-05-16T17:33:13.1679894Z Unpacking libudunits2-dev:amd64 (2.2.26-5) ... 2021-05-16T17:33:13.2354980Z Setting up libudunits2-data (2.2.26-5) ... 2021-05-16T17:33:13.2379780Z Setting up libudunits2-0:amd64 (2.2.26-5) ... 2021-05-16T17:33:13.2397805Z Setting up libudunits2-dev:amd64 (2.2.26-5) ... 2021-05-16T17:33:13.2427738Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-16T17:33:13.3418352Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:33:15.1999114Z Reading package lists... 2021-05-16T17:33:15.3421342Z Building dependency tree... 2021-05-16T17:33:15.3439478Z Reading state information... 2021-05-16T17:33:15.5237283Z The following NEW packages will be installed: 2021-05-16T17:33:15.5240086Z libjq-dev 2021-05-16T17:33:15.5705578Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:33:15.5706914Z Need to get 11.2 kB of archives. 2021-05-16T17:33:15.5707725Z After this operation, 47.1 kB of additional disk space will be used. 2021-05-16T17:33:15.5710378Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libjq-dev amd64 1.6-1ubuntu0.20.04.1 [11.2 kB] 2021-05-16T17:33:15.9463815Z Fetched 11.2 kB in 0s (260 kB/s) 2021-05-16T17:33:15.9732377Z Selecting previously unselected package libjq-dev:amd64. 2021-05-16T17:33:15.9804524Z (Reading database ... 2021-05-16T17:33:15.9805222Z (Reading database ... 5% 2021-05-16T17:33:15.9805881Z (Reading database ... 10% 2021-05-16T17:33:15.9806536Z (Reading database ... 15% 2021-05-16T17:33:15.9807165Z (Reading database ... 20% 2021-05-16T17:33:15.9807793Z (Reading database ... 25% 2021-05-16T17:33:15.9808420Z (Reading database ... 30% 2021-05-16T17:33:15.9809046Z (Reading database ... 35% 2021-05-16T17:33:15.9809682Z (Reading database ... 40% 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(1.6-1ubuntu0.20.04.1) ... 2021-05-16T17:33:17.9942619Z Reading package lists... 2021-05-16T17:33:18.1415343Z Building dependency tree... 2021-05-16T17:33:18.1434313Z Reading state information... 2021-05-16T17:33:18.3212107Z The following NEW packages will be installed: 2021-05-16T17:33:18.3214274Z libmng2 2021-05-16T17:33:18.3778739Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:33:18.3780217Z Need to get 168 kB of archives. 2021-05-16T17:33:18.3781040Z After this operation, 571 kB of additional disk space will be used. 2021-05-16T17:33:18.3782925Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmng2 amd64 2.0.3+dfsg-3 [168 kB] 2021-05-16T17:33:18.7661357Z Fetched 168 kB in 0s (2529 kB/s) 2021-05-16T17:33:18.7944981Z Selecting previously unselected package libmng2:amd64. 2021-05-16T17:33:18.8019114Z (Reading database ... 2021-05-16T17:33:18.8022416Z (Reading database ... 5% 2021-05-16T17:33:18.8022876Z (Reading database ... 10% 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2021-05-16T17:33:18.9094029Z (Reading database ... 267992 files and directories currently installed.) 2021-05-16T17:33:18.9210417Z Preparing to unpack .../libmng2_2.0.3+dfsg-3_amd64.deb ... 2021-05-16T17:33:18.9228112Z Unpacking libmng2:amd64 (2.0.3+dfsg-3) ... 2021-05-16T17:33:18.9904414Z Setting up libmng2:amd64 (2.0.3+dfsg-3) ... 2021-05-16T17:33:18.9947222Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:33:20.8609563Z Reading package lists... 2021-05-16T17:33:21.0133746Z Building dependency tree... 2021-05-16T17:33:21.0151417Z Reading state information... 2021-05-16T17:33:21.1274730Z E: Unable to locate package libmng1 2021-05-16T17:33:21.1872737Z Reading package lists... 2021-05-16T17:33:21.3281236Z Building dependency tree... 2021-05-16T17:33:21.3300595Z Reading state information... 2021-05-16T17:33:21.4417873Z E: Unable to locate package libapparmor-devel 2021-05-16T17:33:21.5028070Z Reading package lists... 2021-05-16T17:33:21.6498167Z Building dependency tree... 2021-05-16T17:33:21.6515973Z Reading state information... 2021-05-16T17:33:21.7906883Z The following additional packages will be installed: 2021-05-16T17:33:21.7908812Z libij-java 2021-05-16T17:33:21.8323949Z The following NEW packages will be installed: 2021-05-16T17:33:21.8330802Z imagej libij-java 2021-05-16T17:33:21.8904028Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:33:21.8904805Z Need to get 2328 kB of archives. 2021-05-16T17:33:21.8905619Z After this operation, 2498 kB of additional disk space will be used. 2021-05-16T17:33:21.8907475Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libij-java all 1.52r-1 [2284 kB] 2021-05-16T17:33:22.2030731Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 imagej all 1.52r-1 [43.7 kB] 2021-05-16T17:33:22.5830636Z Fetched 2328 kB in 0s (6305 kB/s) 2021-05-16T17:33:22.6105263Z Selecting previously unselected package libij-java. 2021-05-16T17:33:22.6182891Z (Reading 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lists... 2021-05-16T17:33:25.7744688Z Building dependency tree... 2021-05-16T17:33:25.7762546Z Reading state information... 2021-05-16T17:33:25.9148707Z Suggested packages: 2021-05-16T17:33:25.9150489Z bowtie2-examples 2021-05-16T17:33:25.9569285Z The following NEW packages will be installed: 2021-05-16T17:33:25.9574259Z bowtie2 2021-05-16T17:33:25.9833439Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:33:25.9834548Z Need to get 1324 kB of archives. 2021-05-16T17:33:25.9835359Z After this operation, 5630 kB of additional disk space will be used. 2021-05-16T17:33:25.9837073Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 bowtie2 amd64 2.3.5.1-6build1 [1324 kB] 2021-05-16T17:33:26.4045385Z Fetched 1324 kB in 0s (20.5 MB/s) 2021-05-16T17:33:26.4335728Z Selecting previously unselected package bowtie2. 2021-05-16T17:33:26.4393864Z (Reading database ... 2021-05-16T17:33:26.4394791Z (Reading database ... 5% 2021-05-16T17:33:26.4395302Z (Reading database ... 10% 2021-05-16T17:33:26.4395832Z (Reading database ... 15% 2021-05-16T17:33:26.4396292Z (Reading database ... 20% 2021-05-16T17:33:26.4396798Z (Reading database ... 25% 2021-05-16T17:33:26.4397266Z (Reading database ... 30% 2021-05-16T17:33:26.4397721Z (Reading database ... 35% 2021-05-16T17:33:26.4398190Z (Reading database ... 40% 2021-05-16T17:33:26.4398643Z (Reading database ... 45% 2021-05-16T17:33:26.4399106Z (Reading database ... 50% 2021-05-16T17:33:26.4443249Z (Reading database ... 55% 2021-05-16T17:33:26.4487637Z (Reading database ... 60% 2021-05-16T17:33:26.4512756Z (Reading database ... 65% 2021-05-16T17:33:26.4620345Z (Reading database ... 70% 2021-05-16T17:33:26.4725126Z (Reading database ... 75% 2021-05-16T17:33:26.4747281Z (Reading database ... 80% 2021-05-16T17:33:26.5224072Z (Reading database ... 85% 2021-05-16T17:33:27.3302946Z (Reading database ... 90% 2021-05-16T17:33:27.3304160Z (Reading database ... 95% 2021-05-16T17:33:27.3304824Z (Reading database ... 100% 2021-05-16T17:33:27.3305652Z (Reading database ... 268021 files and directories currently installed.) 2021-05-16T17:33:27.3307380Z Preparing to unpack .../bowtie2_2.3.5.1-6build1_amd64.deb ... 2021-05-16T17:33:27.3308399Z Unpacking bowtie2 (2.3.5.1-6build1) ... 2021-05-16T17:33:27.3309208Z Setting up bowtie2 (2.3.5.1-6build1) ... 2021-05-16T17:33:27.3310632Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:33:29.3402392Z Reading package lists... 2021-05-16T17:33:29.4821068Z Building dependency tree... 2021-05-16T17:33:29.4839389Z Reading state information... 2021-05-16T17:33:29.5948161Z E: Unable to locate package install 2021-05-16T17:33:29.5949369Z E: Unable to locate package gdal 2021-05-16T17:33:29.6543402Z Reading package lists... 2021-05-16T17:33:29.7998897Z Building dependency tree... 2021-05-16T17:33:29.8019536Z Reading state information... 2021-05-16T17:33:29.8230055Z Package insighttoolkit4-python is not available, but is referred to by another package. 2021-05-16T17:33:29.8231061Z This may mean that the package is missing, has been obsoleted, or 2021-05-16T17:33:29.8231709Z is only available from another source 2021-05-16T17:33:29.8232035Z 2021-05-16T17:33:29.9142356Z E: Package 'insighttoolkit4-python' has no installation candidate 2021-05-16T17:33:29.9743645Z Reading package lists... 2021-05-16T17:33:30.1175599Z Building dependency tree... 2021-05-16T17:33:30.1195720Z Reading state information... 2021-05-16T17:33:30.1406140Z Package libav-tools is not available, but is referred to by another package. 2021-05-16T17:33:30.1407064Z This may mean that the package is missing, has been obsoleted, or 2021-05-16T17:33:30.1408005Z is only available from another source 2021-05-16T17:33:30.1408635Z However the following packages replace it: 2021-05-16T17:33:30.1409097Z ffmpeg 2021-05-16T17:33:30.1409326Z 2021-05-16T17:33:30.2316886Z E: Package 'libav-tools' has no installation candidate 2021-05-16T17:33:30.2915750Z Reading package lists... 2021-05-16T17:33:30.4332186Z Building dependency tree... 2021-05-16T17:33:30.4351085Z Reading state information... 2021-05-16T17:33:30.5719263Z The following additional packages will be installed: 2021-05-16T17:33:30.5722893Z libgcrypt20-dev libgit2-28 libgpg-error-dev libhttp-parser-dev 2021-05-16T17:33:30.5725859Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-05-16T17:33:30.5729555Z libssh2-1-dev 2021-05-16T17:33:30.5730073Z Suggested packages: 2021-05-16T17:33:30.5730865Z libgcrypt20-doc libmbedtls-doc 2021-05-16T17:33:30.6153252Z The following NEW packages will be installed: 2021-05-16T17:33:30.6155457Z libgcrypt20-dev libgit2-28 libgit2-dev libgpg-error-dev libhttp-parser-dev 2021-05-16T17:33:30.6157159Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-05-16T17:33:30.6158295Z libssh2-1-dev 2021-05-16T17:33:30.6357625Z 0 upgraded, 11 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:33:30.6358310Z Need to get 2667 kB of archives. 2021-05-16T17:33:30.6358982Z After this operation, 11.2 MB of additional disk space will be used. 2021-05-16T17:33:30.6360611Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgpg-error-dev amd64 1.37-1 [109 kB] 2021-05-16T17:33:30.6397704Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcrypt20-dev amd64 1.8.5-5ubuntu1 [470 kB] 2021-05-16T17:33:30.6700750Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser2.9 amd64 2.9.2-2 [21.8 kB] 2021-05-16T17:33:30.6763915Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedcrypto3 amd64 2.16.4-1ubuntu2 [150 kB] 2021-05-16T17:33:30.6902826Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedx509-0 amd64 2.16.4-1ubuntu2 [42.3 kB] 2021-05-16T17:33:30.6983251Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls12 amd64 2.16.4-1ubuntu2 [71.8 kB] 2021-05-16T17:33:30.7082681Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-28 amd64 0.28.4+dfsg.1-2 [403 kB] 2021-05-16T17:33:30.7285322Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls-dev amd64 2.16.4-1ubuntu2 [444 kB] 2021-05-16T17:33:30.7543584Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libssh2-1-dev amd64 1.8.0-2.1build1 [244 kB] 2021-05-16T17:33:30.7706643Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser-dev amd64 2.9.2-2 [20.2 kB] 2021-05-16T17:33:30.7781678Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-dev amd64 0.28.4+dfsg.1-2 [691 kB] 2021-05-16T17:33:31.1870261Z Fetched 2667 kB in 0s (14.7 MB/s) 2021-05-16T17:33:31.2152821Z Selecting previously unselected package libgpg-error-dev. 2021-05-16T17:33:31.2232257Z (Reading database ... 2021-05-16T17:33:31.2232770Z (Reading database ... 5% 2021-05-16T17:33:31.2233238Z (Reading database 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2021-05-16T17:33:31.3348881Z (Reading database ... 268047 files and directories currently installed.) 2021-05-16T17:33:31.3460106Z Preparing to unpack .../00-libgpg-error-dev_1.37-1_amd64.deb ... 2021-05-16T17:33:31.3471741Z Unpacking libgpg-error-dev (1.37-1) ... 2021-05-16T17:33:31.3807040Z Selecting previously unselected package libgcrypt20-dev. 2021-05-16T17:33:31.4068203Z Preparing to unpack .../01-libgcrypt20-dev_1.8.5-5ubuntu1_amd64.deb ... 2021-05-16T17:33:31.4081459Z Unpacking libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-05-16T17:33:31.4715628Z Selecting previously unselected package libhttp-parser2.9:amd64. 2021-05-16T17:33:31.4978989Z Preparing to unpack .../02-libhttp-parser2.9_2.9.2-2_amd64.deb ... 2021-05-16T17:33:31.4993508Z Unpacking libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-05-16T17:33:31.5218978Z Selecting previously unselected package libmbedcrypto3:amd64. 2021-05-16T17:33:31.5484013Z Preparing to unpack .../03-libmbedcrypto3_2.16.4-1ubuntu2_amd64.deb ... 2021-05-16T17:33:31.5490736Z Unpacking libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T17:33:31.5895153Z Selecting previously unselected package libmbedx509-0:amd64. 2021-05-16T17:33:31.6082174Z Preparing to unpack .../04-libmbedx509-0_2.16.4-1ubuntu2_amd64.deb ... 2021-05-16T17:33:31.6100529Z Unpacking libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T17:33:31.6414932Z Selecting previously unselected package libmbedtls12:amd64. 2021-05-16T17:33:31.6617020Z Preparing to unpack .../05-libmbedtls12_2.16.4-1ubuntu2_amd64.deb ... 2021-05-16T17:33:31.6627685Z Unpacking libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T17:33:31.6975192Z Selecting previously unselected package libgit2-28:amd64. 2021-05-16T17:33:31.7171345Z Preparing to unpack .../06-libgit2-28_0.28.4+dfsg.1-2_amd64.deb ... 2021-05-16T17:33:31.7184772Z Unpacking libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-05-16T17:33:31.7815500Z Selecting previously unselected package libmbedtls-dev:amd64. 2021-05-16T17:33:31.8016307Z Preparing to unpack .../07-libmbedtls-dev_2.16.4-1ubuntu2_amd64.deb ... 2021-05-16T17:33:31.8026678Z Unpacking libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T17:33:31.8695884Z Selecting previously unselected package libssh2-1-dev:amd64. 2021-05-16T17:33:31.8919023Z Preparing to unpack .../08-libssh2-1-dev_1.8.0-2.1build1_amd64.deb ... 2021-05-16T17:33:31.8928726Z Unpacking libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-05-16T17:33:31.9456053Z Selecting previously unselected package libhttp-parser-dev. 2021-05-16T17:33:31.9698651Z Preparing to unpack .../09-libhttp-parser-dev_2.9.2-2_amd64.deb ... 2021-05-16T17:33:31.9720864Z Unpacking libhttp-parser-dev (2.9.2-2) ... 2021-05-16T17:33:32.0055129Z Selecting previously unselected package libgit2-dev:amd64. 2021-05-16T17:33:32.0247073Z Preparing to unpack .../10-libgit2-dev_0.28.4+dfsg.1-2_amd64.deb ... 2021-05-16T17:33:32.0256203Z Unpacking libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-05-16T17:33:32.1408341Z Setting up libgpg-error-dev (1.37-1) ... 2021-05-16T17:33:32.1435603Z Setting up libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T17:33:32.1458505Z Setting up libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-05-16T17:33:32.1496189Z Setting up libhttp-parser-dev (2.9.2-2) ... 2021-05-16T17:33:32.1529602Z Setting up libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T17:33:32.1557053Z Setting up libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T17:33:32.1579236Z Setting up libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T17:33:32.1602538Z Setting up libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-05-16T17:33:32.1629521Z Setting up libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-05-16T17:33:32.1655264Z Setting up libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-05-16T17:33:32.1678955Z Setting up libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-05-16T17:33:32.1701606Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:33:36.6005027Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-16T17:33:36.7009877Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:33:38.5577169Z Reading package lists... 2021-05-16T17:33:38.7000379Z Building dependency tree... 2021-05-16T17:33:38.7018676Z Reading state information... 2021-05-16T17:33:38.9190574Z libtiff-dev is already the newest version (4.1.0+git191117-2ubuntu0.20.04.1). 2021-05-16T17:33:38.9191836Z libtiff-dev set to manually installed. 2021-05-16T17:33:38.9192824Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:33:38.9782405Z Reading package lists... 2021-05-16T17:33:39.1227362Z Building dependency tree... 2021-05-16T17:33:39.1246136Z Reading state information... 2021-05-16T17:33:39.3270226Z unixodbc-dev is already the newest version (2.3.7). 2021-05-16T17:33:39.3271538Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:33:39.3866138Z Reading package lists... 2021-05-16T17:33:39.5305291Z Building dependency tree... 2021-05-16T17:33:39.5322994Z Reading state information... 2021-05-16T17:33:39.7084026Z The following NEW packages will be installed: 2021-05-16T17:33:39.7085747Z libsodium-dev 2021-05-16T17:33:39.7331917Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:33:39.7333063Z Need to get 169 kB of archives. 2021-05-16T17:33:39.7334696Z After this operation, 826 kB of additional disk space will be used. 2021-05-16T17:33:39.7336581Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsodium-dev amd64 1.0.18-1 [169 kB] 2021-05-16T17:33:40.1231675Z Fetched 169 kB in 0s (5499 kB/s) 2021-05-16T17:33:40.1503098Z Selecting previously unselected package libsodium-dev:amd64. 2021-05-16T17:33:40.1576175Z (Reading database ... 2021-05-16T17:33:40.1576936Z (Reading database ... 5% 2021-05-16T17:33:40.1577583Z (Reading database ... 10% 2021-05-16T17:33:40.1578220Z (Reading database ... 15% 2021-05-16T17:33:40.1578873Z (Reading database ... 20% 2021-05-16T17:33:40.1579542Z (Reading database ... 25% 2021-05-16T17:33:40.1580213Z (Reading database ... 30% 2021-05-16T17:33:40.1580825Z (Reading database ... 35% 2021-05-16T17:33:40.1581460Z (Reading database ... 40% 2021-05-16T17:33:40.1582084Z (Reading database ... 45% 2021-05-16T17:33:40.1582702Z (Reading database ... 50% 2021-05-16T17:33:40.1620099Z (Reading database ... 55% 2021-05-16T17:33:40.1662826Z (Reading database ... 60% 2021-05-16T17:33:40.1686641Z (Reading database ... 65% 2021-05-16T17:33:40.1801326Z (Reading database ... 70% 2021-05-16T17:33:40.1909406Z (Reading database ... 75% 2021-05-16T17:33:40.1930985Z (Reading database ... 80% 2021-05-16T17:33:40.2411091Z (Reading database ... 85% 2021-05-16T17:33:40.2571446Z (Reading database ... 90% 2021-05-16T17:33:40.2646017Z (Reading database ... 95% 2021-05-16T17:33:40.2646601Z (Reading database ... 100% 2021-05-16T17:33:40.2647418Z (Reading database ... 268550 files and directories currently installed.) 2021-05-16T17:33:40.2762107Z Preparing to unpack .../libsodium-dev_1.0.18-1_amd64.deb ... 2021-05-16T17:33:40.2777583Z Unpacking libsodium-dev:amd64 (1.0.18-1) ... 2021-05-16T17:33:40.3523755Z Setting up libsodium-dev:amd64 (1.0.18-1) ... 2021-05-16T17:33:42.1956853Z Reading package lists... 2021-05-16T17:33:42.3359956Z Building dependency tree... 2021-05-16T17:33:42.3377562Z Reading state information... 2021-05-16T17:33:42.4740511Z The following additional packages will be installed: 2021-05-16T17:33:42.4743473Z libarchive-dev liblept5 libtesseract4 tesseract-ocr tesseract-ocr-osd 2021-05-16T17:33:42.5173727Z The following NEW packages will be installed: 2021-05-16T17:33:42.5178550Z libarchive-dev liblept5 libleptonica-dev libtesseract-dev libtesseract4 2021-05-16T17:33:42.5179975Z tesseract-ocr tesseract-ocr-eng tesseract-ocr-osd 2021-05-16T17:33:42.5410029Z 0 upgraded, 8 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:33:42.5410713Z Need to get 10.4 MB of archives. 2021-05-16T17:33:42.5411825Z After this operation, 38.0 MB of additional disk space will be used. 2021-05-16T17:33:42.5413493Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-dev amd64 3.4.0-2ubuntu1 [490 kB] 2021-05-16T17:33:42.5752803Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblept5 amd64 1.79.0-1 [999 kB] 2021-05-16T17:33:42.6203666Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libleptonica-dev amd64 1.79.0-1 [1389 kB] 2021-05-16T17:33:42.6690696Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract4 amd64 4.1.1-2build2 [1237 kB] 2021-05-16T17:33:42.7393403Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract-dev amd64 4.1.1-2build2 [1463 kB] 2021-05-16T17:33:42.7996761Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-eng all 1:4.00~git30-7274cfa-1 [1598 kB] 2021-05-16T17:33:42.8564445Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-osd all 1:4.00~git30-7274cfa-1 [2990 kB] 2021-05-16T17:33:42.9603842Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr amd64 4.1.1-2build2 [262 kB] 2021-05-16T17:33:43.3566353Z Fetched 10.4 MB in 0s (23.2 MB/s) 2021-05-16T17:33:43.3856309Z Selecting previously unselected package libarchive-dev:amd64. 2021-05-16T17:33:43.3916635Z (Reading database ... 2021-05-16T17:33:43.3917327Z (Reading database ... 5% 2021-05-16T17:33:43.3918002Z (Reading database ... 10% 2021-05-16T17:33:43.3918648Z (Reading database ... 15% 2021-05-16T17:33:43.3919264Z (Reading database ... 20% 2021-05-16T17:33:43.3919914Z (Reading database ... 25% 2021-05-16T17:33:43.3920538Z (Reading database ... 30% 2021-05-16T17:33:43.3921168Z (Reading database ... 35% 2021-05-16T17:33:43.3921797Z (Reading database ... 40% 2021-05-16T17:33:43.3922418Z (Reading database ... 45% 2021-05-16T17:33:43.3923048Z (Reading database 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.../1-liblept5_1.79.0-1_amd64.deb ... 2021-05-16T17:33:43.5986883Z Unpacking liblept5:amd64 (1.79.0-1) ... 2021-05-16T17:33:43.7045980Z Selecting previously unselected package libleptonica-dev:amd64. 2021-05-16T17:33:43.7314261Z Preparing to unpack .../2-libleptonica-dev_1.79.0-1_amd64.deb ... 2021-05-16T17:33:43.7322545Z Unpacking libleptonica-dev:amd64 (1.79.0-1) ... 2021-05-16T17:33:43.8735165Z Selecting previously unselected package libtesseract4:amd64. 2021-05-16T17:33:43.8949533Z Preparing to unpack .../3-libtesseract4_4.1.1-2build2_amd64.deb ... 2021-05-16T17:33:43.8962624Z Unpacking libtesseract4:amd64 (4.1.1-2build2) ... 2021-05-16T17:33:44.0256524Z Selecting previously unselected package libtesseract-dev:amd64. 2021-05-16T17:33:44.0522142Z Preparing to unpack .../4-libtesseract-dev_4.1.1-2build2_amd64.deb ... 2021-05-16T17:33:44.0532702Z Unpacking libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-05-16T17:33:44.2176953Z Selecting previously unselected package tesseract-ocr-eng. 2021-05-16T17:33:44.2413207Z Preparing to unpack .../5-tesseract-ocr-eng_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-05-16T17:33:44.2419535Z Unpacking tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-05-16T17:33:44.3975553Z Selecting previously unselected package tesseract-ocr-osd. 2021-05-16T17:33:44.4230324Z Preparing to unpack .../6-tesseract-ocr-osd_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-05-16T17:33:44.4241823Z Unpacking tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-05-16T17:33:44.7415601Z Selecting previously unselected package tesseract-ocr. 2021-05-16T17:33:44.7646864Z Preparing to unpack .../7-tesseract-ocr_4.1.1-2build2_amd64.deb ... 2021-05-16T17:33:44.7658877Z Unpacking tesseract-ocr (4.1.1-2build2) ... 2021-05-16T17:33:45.8334495Z Setting up tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-05-16T17:33:45.8342248Z Setting up liblept5:amd64 (1.79.0-1) ... 2021-05-16T17:33:45.8343186Z Setting up libleptonica-dev:amd64 (1.79.0-1) ... 2021-05-16T17:33:45.8344113Z Setting up libtesseract4:amd64 (4.1.1-2build2) ... 2021-05-16T17:33:45.8345066Z Setting up libarchive-dev:amd64 (3.4.0-2ubuntu1) ... 2021-05-16T17:33:45.8346080Z Setting up tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-05-16T17:33:45.8347083Z Setting up libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-05-16T17:33:45.8348005Z Setting up tesseract-ocr (4.1.1-2build2) ... 2021-05-16T17:33:45.8348867Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:33:47.5358414Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:33:49.3973043Z Reading package lists... 2021-05-16T17:33:49.5390445Z Building dependency tree... 2021-05-16T17:33:49.5408095Z Reading state information... 2021-05-16T17:33:49.7420616Z wget is already the newest version (1.20.3-1ubuntu1). 2021-05-16T17:33:49.7421879Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:33:49.8016005Z Reading package lists... 2021-05-16T17:33:49.9498207Z Building dependency tree... 2021-05-16T17:33:49.9516047Z Reading state information... 2021-05-16T17:33:50.0873449Z The following additional packages will be installed: 2021-05-16T17:33:50.0876901Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-05-16T17:33:50.0879819Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev 2021-05-16T17:33:50.0881638Z Suggested packages: 2021-05-16T17:33:50.0882481Z doc-base krb5-doc krb5-user libnorm-doc 2021-05-16T17:33:50.1344004Z The following NEW packages will be installed: 2021-05-16T17:33:50.1346046Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-05-16T17:33:50.1349219Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev libzmq3-dev 2021-05-16T17:33:50.1537970Z 0 upgraded, 10 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:33:50.1538928Z Need to get 1459 kB of archives. 2021-05-16T17:33:50.1539619Z After this operation, 7754 kB of additional disk space will be used. 2021-05-16T17:33:50.1541795Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgssrpc4 amd64 1.17-6ubuntu4.1 [55.4 kB] 2021-05-16T17:33:50.1565239Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkdb5-9 amd64 1.17-6ubuntu4.1 [37.3 kB] 2021-05-16T17:33:50.1571759Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5srv-mit11 amd64 1.17-6ubuntu4.1 [49.5 kB] 2021-05-16T17:33:50.1579520Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5clnt-mit11 amd64 1.17-6ubuntu4.1 [37.6 kB] 2021-05-16T17:33:50.1584538Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 comerr-dev amd64 2.1-1.45.5-2ubuntu1 [39.9 kB] 2021-05-16T17:33:50.1589165Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 krb5-multidev amd64 1.17-6ubuntu4.1 [120 kB] 2021-05-16T17:33:50.1605459Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnorm-dev amd64 1.5.8+dfsg2-2build1 [463 kB] 2021-05-16T17:33:50.1651093Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpgm-dev amd64 5.2.122~dfsg-3ubuntu1 [189 kB] 2021-05-16T17:33:50.1667343Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkrb5-dev amd64 1.17-6ubuntu4.1 [11.7 kB] 2021-05-16T17:33:50.1672859Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzmq3-dev amd64 4.3.2-2ubuntu1 [455 kB] 2021-05-16T17:33:50.5619319Z Fetched 1459 kB in 0s (39.5 MB/s) 2021-05-16T17:33:50.5904322Z Selecting previously unselected package libgssrpc4:amd64. 2021-05-16T17:33:50.5978841Z (Reading database ... 2021-05-16T17:33:50.5979520Z (Reading database ... 5% 2021-05-16T17:33:50.5980013Z (Reading database ... 10% 2021-05-16T17:33:50.5980462Z (Reading database ... 15% 2021-05-16T17:33:50.5980918Z (Reading database ... 20% 2021-05-16T17:33:50.5981359Z (Reading database ... 25% 2021-05-16T17:33:50.5981841Z (Reading database ... 30% 2021-05-16T17:33:50.5982295Z (Reading database ... 35% 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2021-05-16T17:33:50.7455458Z Selecting previously unselected package libkdb5-9:amd64. 2021-05-16T17:33:50.7691597Z Preparing to unpack .../1-libkdb5-9_1.17-6ubuntu4.1_amd64.deb ... 2021-05-16T17:33:50.7701563Z Unpacking libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T17:33:50.7969434Z Selecting previously unselected package libkadm5srv-mit11:amd64. 2021-05-16T17:33:50.8233357Z Preparing to unpack .../2-libkadm5srv-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-05-16T17:33:50.8247030Z Unpacking libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T17:33:50.8576373Z Selecting previously unselected package libkadm5clnt-mit11:amd64. 2021-05-16T17:33:50.8793387Z Preparing to unpack .../3-libkadm5clnt-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-05-16T17:33:50.8807071Z Unpacking libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T17:33:50.9067177Z Selecting previously unselected package comerr-dev:amd64. 2021-05-16T17:33:50.9337830Z Preparing to unpack .../4-comerr-dev_2.1-1.45.5-2ubuntu1_amd64.deb ... 2021-05-16T17:33:50.9366657Z Unpacking comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-05-16T17:33:50.9695900Z Selecting previously unselected package krb5-multidev:amd64. 2021-05-16T17:33:50.9911079Z Preparing to unpack .../5-krb5-multidev_1.17-6ubuntu4.1_amd64.deb ... 2021-05-16T17:33:50.9921939Z Unpacking krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T17:33:51.0256350Z Selecting previously unselected package libnorm-dev:amd64. 2021-05-16T17:33:51.0535625Z Preparing to unpack .../6-libnorm-dev_1.5.8+dfsg2-2build1_amd64.deb ... 2021-05-16T17:33:51.0546455Z Unpacking libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-05-16T17:33:51.1295642Z Selecting previously unselected package libpgm-dev:amd64. 2021-05-16T17:33:51.1503406Z Preparing to unpack .../7-libpgm-dev_5.2.122~dfsg-3ubuntu1_amd64.deb ... 2021-05-16T17:33:51.1515962Z Unpacking libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-05-16T17:33:51.1975749Z Selecting previously unselected package libkrb5-dev:amd64. 2021-05-16T17:33:51.2181910Z Preparing to unpack .../8-libkrb5-dev_1.17-6ubuntu4.1_amd64.deb ... 2021-05-16T17:33:51.2190595Z Unpacking libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T17:33:51.2495643Z Selecting previously unselected package libzmq3-dev:amd64. 2021-05-16T17:33:51.2716043Z Preparing to unpack .../9-libzmq3-dev_4.3.2-2ubuntu1_amd64.deb ... 2021-05-16T17:33:51.2729868Z Unpacking libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-05-16T17:33:51.3739916Z Setting up libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-05-16T17:33:51.3766561Z Setting up libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T17:33:51.3785161Z Setting up libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-05-16T17:33:51.3803120Z Setting up comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-05-16T17:33:51.3836840Z Setting up libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T17:33:51.3860176Z Setting up libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T17:33:51.3889367Z Setting up libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T17:33:51.3924416Z Setting up krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T17:33:51.3945678Z Setting up libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T17:33:51.3974661Z Setting up libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-05-16T17:33:51.4009605Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:33:51.4192697Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:33:54.3128349Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-16T17:33:56.2564630Z Reading package lists... 2021-05-16T17:33:56.4011274Z Building dependency tree... 2021-05-16T17:33:56.4029450Z Reading state information... 2021-05-16T17:33:56.5151931Z E: Unable to locate package udunits 2021-05-16T17:33:56.5745376Z Reading package lists... 2021-05-16T17:33:56.7177418Z Building dependency tree... 2021-05-16T17:33:56.7195370Z Reading state information... 2021-05-16T17:33:56.8565332Z The following additional packages will be installed: 2021-05-16T17:33:56.8566579Z libwebpdemux2 2021-05-16T17:33:56.8977139Z The following NEW packages will be installed: 2021-05-16T17:33:56.8980002Z libwebp-dev libwebpdemux2 2021-05-16T17:33:56.9169401Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:33:56.9170115Z Need to get 277 kB of archives. 2021-05-16T17:33:56.9170778Z After this operation, 965 kB of additional disk space will be used. 2021-05-16T17:33:56.9172426Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwebpdemux2 amd64 0.6.1-2 [9472 B] 2021-05-16T17:33:56.9238811Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwebp-dev amd64 0.6.1-2 [267 kB] 2021-05-16T17:33:57.3363262Z Fetched 277 kB in 0s (5120 kB/s) 2021-05-16T17:33:57.3695632Z Selecting previously unselected package libwebpdemux2:amd64. 2021-05-16T17:33:57.3724673Z (Reading database ... 2021-05-16T17:33:57.3725193Z (Reading database ... 5% 2021-05-16T17:33:57.3725665Z (Reading 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... 100% 2021-05-16T17:33:58.3378069Z (Reading database ... 269145 files and directories currently installed.) 2021-05-16T17:33:58.3379667Z Preparing to unpack .../libwebpdemux2_0.6.1-2_amd64.deb ... 2021-05-16T17:33:58.3380752Z Unpacking libwebpdemux2:amd64 (0.6.1-2) ... 2021-05-16T17:33:58.3381875Z Selecting previously unselected package libwebp-dev:amd64. 2021-05-16T17:33:58.3383004Z Preparing to unpack .../libwebp-dev_0.6.1-2_amd64.deb ... 2021-05-16T17:33:58.3384007Z Unpacking libwebp-dev:amd64 (0.6.1-2) ... 2021-05-16T17:33:58.3385263Z Setting up libwebpdemux2:amd64 (0.6.1-2) ... 2021-05-16T17:33:58.3386207Z Setting up libwebp-dev:amd64 (0.6.1-2) ... 2021-05-16T17:33:58.3387217Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:33:59.5048442Z Reading package lists... 2021-05-16T17:33:59.6475246Z Building dependency tree... 2021-05-16T17:33:59.6493552Z Reading state information... 2021-05-16T17:33:59.7870791Z The following additional packages will be installed: 2021-05-16T17:33:59.7873153Z gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-05-16T17:33:59.7874946Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-05-16T17:33:59.7876518Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-05-16T17:33:59.7878748Z Suggested packages: 2021-05-16T17:33:59.7879850Z cargo-doc gdb-doc gdbserver rust-doc rust-src 2021-05-16T17:33:59.7880725Z Recommended packages: 2021-05-16T17:33:59.7881381Z cargo 2021-05-16T17:33:59.8337846Z The following NEW packages will be installed: 2021-05-16T17:33:59.8343695Z cargo gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-05-16T17:33:59.8344989Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-05-16T17:33:59.8349751Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-05-16T17:33:59.8847375Z 0 upgraded, 13 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:33:59.8848076Z Need to get 108 MB of archives. 2021-05-16T17:33:59.8848837Z After this operation, 501 MB of additional disk space will be used. 2021-05-16T17:33:59.8850551Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libbabeltrace1 amd64 1.5.8-1build1 [156 kB] 2021-05-16T17:33:59.9002522Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libipt2 amd64 2.0.1-1 [42.8 kB] 2021-05-16T17:33:59.9075317Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight-common all 3.1.8-1.2build5 [50.7 kB] 2021-05-16T17:33:59.9164176Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libboost-regex1.71.0 amd64 1.71.0-6ubuntu6 [471 kB] 2021-05-16T17:33:59.9395475Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight4v5 amd64 3.1.8-1.2build5 [232 kB] 2021-05-16T17:33:59.9543283Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxxhash0 amd64 0.7.3-1 [15.3 kB] 2021-05-16T17:33:59.9664114Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-1.47 amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [59.6 MB] 2021-05-16T17:34:00.0113892Z Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal/main amd64 gdb amd64 10.2-0ubuntu1~20.04~1 [3282 kB] 2021-05-16T17:34:02.0013706Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-dev amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [28.5 MB] 2021-05-16T17:34:02.8546619Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rustc amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [1921 kB] 2021-05-16T17:34:02.9119007Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 cargo amd64 0.47.0-1~exp1ubuntu1~20.04.1 [3147 kB] 2021-05-16T17:34:03.0084582Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libc6-dbg amd64 2.31-0ubuntu9.2 [10.5 MB] 2021-05-16T17:34:03.3748885Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rust-gdb all 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [27.5 kB] 2021-05-16T17:34:03.7678443Z Fetched 108 MB in 4s (30.5 MB/s) 2021-05-16T17:34:03.7958434Z Selecting previously unselected package libbabeltrace1:amd64. 2021-05-16T17:34:03.8033562Z (Reading database ... 2021-05-16T17:34:03.8034546Z (Reading database ... 5% 2021-05-16T17:34:03.8035040Z (Reading database ... 10% 2021-05-16T17:34:03.8035522Z (Reading database ... 15% 2021-05-16T17:34:03.8036007Z (Reading database ... 20% 2021-05-16T17:34:03.8036467Z (Reading database ... 25% 2021-05-16T17:34:03.8036909Z (Reading database ... 30% 2021-05-16T17:34:03.8037362Z (Reading database ... 35% 2021-05-16T17:34:03.8037814Z (Reading database ... 40% 2021-05-16T17:34:03.8038438Z (Reading database ... 45% 2021-05-16T17:34:03.8038879Z (Reading database ... 50% 2021-05-16T17:34:03.8065650Z (Reading database ... 55% 2021-05-16T17:34:03.8103839Z (Reading database ... 60% 2021-05-16T17:34:03.8132208Z (Reading database ... 65% 2021-05-16T17:34:03.8243095Z (Reading database ... 70% 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.../02-libsource-highlight-common_3.1.8-1.2build5_all.deb ... 2021-05-16T17:34:04.0382419Z Unpacking libsource-highlight-common (3.1.8-1.2build5) ... 2021-05-16T17:34:04.0777125Z Selecting previously unselected package libboost-regex1.71.0:amd64. 2021-05-16T17:34:04.1028047Z Preparing to unpack .../03-libboost-regex1.71.0_1.71.0-6ubuntu6_amd64.deb ... 2021-05-16T17:34:04.1041170Z Unpacking libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-05-16T17:34:04.1695912Z Selecting previously unselected package libsource-highlight4v5. 2021-05-16T17:34:04.1971523Z Preparing to unpack .../04-libsource-highlight4v5_3.1.8-1.2build5_amd64.deb ... 2021-05-16T17:34:04.1982297Z Unpacking libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-05-16T17:34:04.2455108Z Selecting previously unselected package libxxhash0:amd64. 2021-05-16T17:34:04.2666977Z Preparing to unpack .../05-libxxhash0_0.7.3-1_amd64.deb ... 2021-05-16T17:34:04.2675497Z Unpacking libxxhash0:amd64 (0.7.3-1) ... 2021-05-16T17:34:04.2886110Z Selecting previously unselected package gdb. 2021-05-16T17:34:04.3163217Z Preparing to unpack .../06-gdb_10.2-0ubuntu1~20.04~1_amd64.deb ... 2021-05-16T17:34:04.3171812Z Unpacking gdb (10.2-0ubuntu1~20.04~1) ... 2021-05-16T17:34:04.6136150Z Selecting previously unselected package libstd-rust-1.47:amd64. 2021-05-16T17:34:04.6412164Z Preparing to unpack .../07-libstd-rust-1.47_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-05-16T17:34:04.6425947Z Unpacking libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T17:34:10.6496622Z Selecting previously unselected package libstd-rust-dev:amd64. 2021-05-16T17:34:10.6743498Z Preparing to unpack .../08-libstd-rust-dev_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-05-16T17:34:10.6751888Z Unpacking libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T17:34:13.3975473Z Selecting previously unselected package rustc. 2021-05-16T17:34:13.4208751Z Preparing to unpack .../09-rustc_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-05-16T17:34:13.4217349Z Unpacking rustc (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T17:34:13.5957948Z Selecting previously unselected package cargo. 2021-05-16T17:34:13.6236319Z Preparing to unpack .../10-cargo_0.47.0-1~exp1ubuntu1~20.04.1_amd64.deb ... 2021-05-16T17:34:13.6245726Z Unpacking cargo (0.47.0-1~exp1ubuntu1~20.04.1) ... 2021-05-16T17:34:13.9440011Z Selecting previously unselected package libc6-dbg:amd64. 2021-05-16T17:34:13.9722122Z Preparing to unpack .../11-libc6-dbg_2.31-0ubuntu9.2_amd64.deb ... 2021-05-16T17:34:13.9730171Z Unpacking libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-05-16T17:34:15.0440417Z Selecting previously unselected package rust-gdb. 2021-05-16T17:34:15.0719671Z Preparing to unpack .../12-rust-gdb_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_all.deb ... 2021-05-16T17:34:15.0738453Z Unpacking rust-gdb (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T17:34:15.1333582Z Setting up libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T17:34:15.1365024Z Setting up libsource-highlight-common (3.1.8-1.2build5) ... 2021-05-16T17:34:15.1400221Z Setting up libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-05-16T17:34:15.1423938Z Setting up libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T17:34:15.1448215Z Setting up libipt2 (2.0.1-1) ... 2021-05-16T17:34:15.1466389Z Setting up libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-05-16T17:34:15.1484688Z Setting up libbabeltrace1:amd64 (1.5.8-1build1) ... 2021-05-16T17:34:15.1507864Z Setting up rustc (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T17:34:15.1538112Z Setting up libxxhash0:amd64 (0.7.3-1) ... 2021-05-16T17:34:15.1556904Z Setting up libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-05-16T17:34:15.1573978Z Setting up cargo (0.47.0-1~exp1ubuntu1~20.04.1) ... 2021-05-16T17:34:15.1589998Z Setting up gdb (10.2-0ubuntu1~20.04~1) ... 2021-05-16T17:34:15.1615274Z Setting up rust-gdb (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T17:34:15.1639086Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:34:15.1868179Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:34:18.1733563Z Reading package lists... 2021-05-16T17:34:18.3126850Z Building dependency tree... 2021-05-16T17:34:18.3144720Z Reading state information... 2021-05-16T17:34:18.4568354Z The following additional packages will be installed: 2021-05-16T17:34:18.4570778Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-05-16T17:34:18.4572544Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-05-16T17:34:18.4577506Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-05-16T17:34:18.4578977Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-05-16T17:34:18.4580424Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-05-16T17:34:18.4581821Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-05-16T17:34:18.4583090Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-05-16T17:34:18.4584510Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-05-16T17:34:18.4585951Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-05-16T17:34:18.4587335Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-05-16T17:34:18.4589049Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-05-16T17:34:18.4590524Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-05-16T17:34:18.4592033Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-05-16T17:34:18.4593675Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-05-16T17:34:18.4596631Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-05-16T17:34:18.4598152Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-05-16T17:34:18.4599600Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-05-16T17:34:18.4601034Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-05-16T17:34:18.4602557Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-05-16T17:34:18.4603787Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-05-16T17:34:18.4604962Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-05-16T17:34:18.4606231Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-05-16T17:34:18.4607406Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-05-16T17:34:18.4608543Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-05-16T17:34:18.4609831Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-05-16T17:34:18.4611257Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-05-16T17:34:18.4612669Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-05-16T17:34:18.4614211Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-05-16T17:34:18.4615681Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-05-16T17:34:18.4617022Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-05-16T17:34:18.4618317Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-05-16T17:34:18.4619569Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-05-16T17:34:18.4621231Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-05-16T17:34:18.4622771Z python3-cycler python3-dateutil python3-decorator python3-future 2021-05-16T17:34:18.4624284Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-05-16T17:34:18.4626060Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-05-16T17:34:18.4627516Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-05-16T17:34:18.4628900Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-05-16T17:34:18.4630228Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-05-16T17:34:18.4631669Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-05-16T17:34:18.4633122Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-05-16T17:34:18.4634442Z python3-webencodings qdoc-qt5 qgis-common qgis-plugin-grass 2021-05-16T17:34:18.4635784Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-05-16T17:34:18.4637329Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-05-16T17:34:18.4638964Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-05-16T17:34:18.4640359Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-05-16T17:34:18.4641750Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-05-16T17:34:18.4643245Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-05-16T17:34:18.4644508Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-05-16T17:34:18.4645293Z Suggested packages: 2021-05-16T17:34:18.4646443Z avahi-autoipd blt-demo libgdal-grass grass-dev grass-gui e00compr avce00 2021-05-16T17:34:18.4647580Z gnuplot gpsbabel gpstrans netpbm python3-rpy2 python3-termcolor grass 2021-05-16T17:34:18.4648916Z grass-dev-doc gvfs exiv2 geotiff-bin libgeotiff-epsg libvisual-0.4-plugins 2021-05-16T17:34:18.4650197Z libhdf4-doc libhdf4-alt-dev hdf4-tools libjs-jquery-ui-docs avahi-autoipd 2021-05-16T17:34:18.4651301Z | zeroconf ogdi-bin pcscd libqscintilla2-doc qtwayland5 2021-05-16T17:34:18.4652461Z qt5-qmltooling-plugins pinentry-doc python-cycler-doc python-future-doc 2021-05-16T17:34:18.4653712Z python3-genshi python3-lxml-dbg python-lxml-doc dvipng gir1.2-gtk-3.0 2021-05-16T17:34:18.4655073Z inkscape ipython3 python-matplotlib-doc python3-cairocffi python3-gi-cairo 2021-05-16T17:34:18.4656242Z python3-gobject python3-nose python3-scipy python3-tornado 2021-05-16T17:34:18.4657451Z texlive-extra-utils texlive-latex-extra ttf-staypuft python-numpy-doc 2021-05-16T17:34:18.4658751Z python3-pytest python3-numpy-dbg owslib-doc python-pil-doc python3-pil-dbg 2021-05-16T17:34:18.4660084Z python3-pandas python3-ipykernel python-psycopg2-doc python-pyparsing-doc 2021-05-16T17:34:18.4661320Z python3-pyqt5-dbg otb-qgis saga tix python3-tk-dbg qt5-doc comgt wvdial 2021-05-16T17:34:18.4662250Z wpagui libengine-pkcs11-openssl 2021-05-16T17:34:18.5425162Z The following NEW packages will be installed: 2021-05-16T17:34:18.5429270Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-05-16T17:34:18.5432198Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-05-16T17:34:18.5435548Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-05-16T17:34:18.5438372Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-05-16T17:34:18.5440853Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-05-16T17:34:18.5443175Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-05-16T17:34:18.5444289Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-05-16T17:34:18.5447555Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-05-16T17:34:18.5450021Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-05-16T17:34:18.5452582Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-05-16T17:34:18.5455233Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-05-16T17:34:18.5457799Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-05-16T17:34:18.5459164Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-05-16T17:34:18.5460596Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-05-16T17:34:18.5463203Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-05-16T17:34:18.5464528Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-05-16T17:34:18.5465782Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-05-16T17:34:18.5467058Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-05-16T17:34:18.5468364Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-05-16T17:34:18.5469419Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-05-16T17:34:18.5471534Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-05-16T17:34:18.5472663Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-05-16T17:34:18.5473716Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-05-16T17:34:18.5474692Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-05-16T17:34:18.5475697Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-05-16T17:34:18.5477974Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-05-16T17:34:18.5497095Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-05-16T17:34:18.5498398Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-05-16T17:34:18.5499822Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-05-16T17:34:18.5501021Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-05-16T17:34:18.5502133Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-05-16T17:34:18.5503228Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-05-16T17:34:18.5504398Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-05-16T17:34:18.5505627Z python3-cycler python3-dateutil python3-decorator python3-future 2021-05-16T17:34:18.5506932Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-05-16T17:34:18.5508229Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-05-16T17:34:18.5509458Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-05-16T17:34:18.5510644Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-05-16T17:34:18.5511797Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-05-16T17:34:18.5513023Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-05-16T17:34:18.5514287Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-05-16T17:34:18.5515458Z python3-webencodings qdoc-qt5 qgis qgis-common qgis-plugin-grass 2021-05-16T17:34:18.5516628Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-05-16T17:34:18.5518095Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-05-16T17:34:18.5519496Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-05-16T17:34:18.5520718Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-05-16T17:34:18.5521914Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-05-16T17:34:18.5523206Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-05-16T17:34:18.5524314Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-05-16T17:34:18.5705413Z 0 upgraded, 214 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:34:18.5706078Z Need to get 183 MB of archives. 2021-05-16T17:34:18.5706742Z After this operation, 776 MB of additional disk space will be used. 2021-05-16T17:34:18.5708862Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdouble-conversion3 amd64 3.1.5-4ubuntu1 [37.9 kB] 2021-05-16T17:34:18.5729766Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5core5a amd64 5.12.8+dfsg-0ubuntu1 [2005 kB] 2021-05-16T17:34:18.5914398Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl-mesa0 amd64 20.2.6-0ubuntu0.20.04.1 [97.7 kB] 2021-05-16T17:34:18.5928797Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl1 amd64 1.3.2-1~ubuntu0.20.04.1 [31.9 kB] 2021-05-16T17:34:18.5934168Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libevdev2 amd64 1.9.0+dfsg-1ubuntu0.1 [31.6 kB] 2021-05-16T17:34:18.5940868Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmtdev1 amd64 1.1.5-1.1 [14.2 kB] 2021-05-16T17:34:18.5978281Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-common all 1.3-2ubuntu3 [45.3 kB] 2021-05-16T17:34:18.5982126Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom2 amd64 1.3-2ubuntu3 [20.0 kB] 2021-05-16T17:34:18.5985907Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput-bin amd64 1.15.5-1ubuntu0.2 [19.1 kB] 2021-05-16T17:34:18.5990691Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput10 amd64 1.15.5-1ubuntu0.2 [112 kB] 2021-05-16T17:34:18.5995878Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5dbus5 amd64 5.12.8+dfsg-0ubuntu1 [208 kB] 2021-05-16T17:34:18.6000313Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5network5 amd64 5.12.8+dfsg-0ubuntu1 [674 kB] 2021-05-16T17:34:18.6045093Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [10.8 kB] 2021-05-16T17:34:18.6049186Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-util1 amd64 0.4.0-0ubuntu3 [11.2 kB] 2021-05-16T17:34:18.6053679Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-image0 amd64 0.4.0-1build1 [12.3 kB] 2021-05-16T17:34:18.6058498Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-keysyms1 amd64 0.4.0-1build1 [8452 B] 2021-05-16T17:34:18.6063186Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-randr0 amd64 1.14-2 [16.3 kB] 2021-05-16T17:34:18.6068458Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-render-util0 amd64 0.3.9-1build1 [9912 B] 2021-05-16T17:34:18.6096787Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinerama0 amd64 1.14-2 [5260 B] 2021-05-16T17:34:18.6101001Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinput0 amd64 1.14-2 [29.3 kB] 2021-05-16T17:34:18.6106528Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xkb1 amd64 1.14-2 [29.6 kB] 2021-05-16T17:34:18.6108111Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxkbcommon-x11-0 amd64 0.10.0-1 [13.4 kB] 2021-05-16T17:34:18.6110383Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5gui5 amd64 5.12.8+dfsg-0ubuntu1 [2971 kB] 2021-05-16T17:34:18.6304309Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5widgets5 amd64 5.12.8+dfsg-0ubuntu1 [2293 kB] 2021-05-16T17:34:18.6502670Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5svg5 amd64 5.12.8-0ubuntu1 [131 kB] 2021-05-16T17:34:18.6518815Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liborc-0.4-0 amd64 1:0.4.31-1 [188 kB] 2021-05-16T17:34:18.6535970Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgstreamer-plugins-base1.0-0 amd64 1.16.2-4 [735 kB] 2021-05-16T17:34:18.6590123Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhyphen0 amd64 2.8.8-7 [27.0 kB] 2021-05-16T17:34:18.6594210Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5positioning5 amd64 5.12.8+dfsg-0ubuntu1 [197 kB] 2021-05-16T17:34:18.6610844Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5printsupport5 amd64 5.12.8+dfsg-0ubuntu1 [193 kB] 2021-05-16T17:34:18.6633193Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5qml5 amd64 5.12.8-0ubuntu1 [1438 kB] 2021-05-16T17:34:18.6840346Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quick5 amd64 5.12.8-0ubuntu1 [1335 kB] 2021-05-16T17:34:18.7055872Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sensors5 amd64 5.12.8-0ubuntu1 [114 kB] 2021-05-16T17:34:18.7077590Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webchannel5 amd64 5.12.8-0ubuntu1 [51.2 kB] 2021-05-16T17:34:18.7087344Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwoff1 amd64 1.0.2-1build2 [42.0 kB] 2021-05-16T17:34:18.7092986Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webkit5 amd64 5.212.0~alpha4-1ubuntu2 [12.1 MB] 2021-05-16T17:34:18.9250916Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-image-formats-plugins amd64 5.12.8-0ubuntu1 [43.4 kB] 2021-05-16T17:34:18.9491974Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers-common all 3.10.4+dfsg-1ubuntu2 [897 kB] 2021-05-16T17:34:19.0628612Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2 amd64 2.2.1-2build1 [307 kB] 2021-05-16T17:34:19.0837040Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2-plugins amd64 2.2.1-2build1 [191 kB] 2021-05-16T17:34:19.0925288Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5 amd64 5.12.8+dfsg-0ubuntu1 [121 kB] 2021-05-16T17:34:19.0949363Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5-sqlite amd64 5.12.8+dfsg-0ubuntu1 [47.5 kB] 2021-05-16T17:34:19.0958998Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-data all 3.0.4+dfsg-1build3 [186 kB] 2021-05-16T17:34:19.0977536Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarpack2 amd64 3.7.0-3 [92.8 kB] 2021-05-16T17:34:19.0989736Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsuperlu5 amd64 5.2.1+dfsg1-4 [159 kB] 2021-05-16T17:34:19.1006602Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarmadillo9 amd64 1:9.800.4+dfsg-1build1 [93.2 kB] 2021-05-16T17:34:19.1018784Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcfitsio8 amd64 3.470-3 [466 kB] 2021-05-16T17:34:19.1058010Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcharls2 amd64 2.0.0+dfsg-1build1 [74.1 kB] 2021-05-16T17:34:19.1068293Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdap25 amd64 3.20.5-1 [435 kB] 2021-05-16T17:34:19.1104913Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdapclient6v5 amd64 3.20.5-1 [92.2 kB] 2021-05-16T17:34:19.1116916Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libepsilon1 amd64 0.9.2+dfsg-4 [41.0 kB] 2021-05-16T17:34:19.1126034Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfreexl1 amd64 1.0.5-3 [33.4 kB] 2021-05-16T17:34:19.1132557Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfyba0 amd64 4.1.1-6build1 [113 kB] 2021-05-16T17:34:19.1146559Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-3.8.0 amd64 3.8.0-1build1 [535 kB] 2021-05-16T17:34:19.1190069Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-c1v5 amd64 3.8.0-1build1 [69.9 kB] 2021-05-16T17:34:19.1200830Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-data all 6.3.1-1 [7647 kB] 2021-05-16T17:34:19.1744997Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libproj15 amd64 6.3.1-1 [925 kB] 2021-05-16T17:34:19.1821019Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeotiff5 amd64 1.5.1-2 [53.1 kB] 2021-05-16T17:34:19.1829323Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf4-0-alt amd64 4.2.14-1ubuntu1 [268 kB] 2021-05-16T17:34:19.1855373Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libminizip1 amd64 1.1-8build1 [20.2 kB] 2021-05-16T17:34:19.1861767Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liburiparser1 amd64 0.9.3-2 [39.3 kB] 2021-05-16T17:34:19.1869020Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlbase1 amd64 1.3.0-8build1 [45.4 kB] 2021-05-16T17:34:19.1878984Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmldom1 amd64 1.3.0-8build1 [152 kB] 2021-05-16T17:34:19.1893723Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlengine1 amd64 1.3.0-8build1 [72.5 kB] 2021-05-16T17:34:19.1904557Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnetcdf15 amd64 1:4.7.3-1 [341 kB] 2021-05-16T17:34:19.1935685Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libogdi4.1 amd64 4.1.0+ds-1build1 [198 kB] 2021-05-16T17:34:19.1954233Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqhull7 amd64 2015.2-4 [152 kB] 2021-05-16T17:34:19.1970421Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialite7 amd64 4.3.0a-6build1 [1286 kB] 2021-05-16T17:34:19.2067895Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxerces-c3.2 amd64 3.2.2+debian-1build3 [878 kB] 2021-05-16T17:34:19.2136388Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgdal26 amd64 3.0.4+dfsg-1build3 [6156 kB] 2021-05-16T17:34:19.2575438Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5concurrent5 amd64 5.12.8+dfsg-0ubuntu1 [33.5 kB] 2021-05-16T17:34:19.2695543Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5keychain1 amd64 0.10.0-1build1 [48.4 kB] 2021-05-16T17:34:19.2737405Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5serialport5 amd64 5.12.8-0ubuntu1 [33.1 kB] 2021-05-16T17:34:19.2747388Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5xml5 amd64 5.12.8+dfsg-0ubuntu1 [105 kB] 2021-05-16T17:34:19.3146204Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialindex6 amd64 1.9.3-1build1 [266 kB] 2021-05-16T17:34:19.3295269Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzip5 amd64 1.5.1-0ubuntu1 [46.7 kB] 2021-05-16T17:34:19.3727923Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-core3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [5216 kB] 2021-05-16T17:34:20.4695305Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-native3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [44.5 kB] 2021-05-16T17:34:20.4923860Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-l10n all 2.11.2+dfsg-6 [41.3 kB] 2021-05-16T17:34:20.5569822Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-15 amd64 2.11.2+dfsg-6 [1238 kB] 2021-05-16T17:34:20.6753807Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quickwidgets5 amd64 5.12.8-0ubuntu1 [39.8 kB] 2021-05-16T17:34:20.6762446Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5opengl5 amd64 5.12.8+dfsg-0ubuntu1 [136 kB] 2021-05-16T17:34:20.6852461Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqwt-qt5-6 amd64 6.1.4-1.1build1 [427 kB] 2021-05-16T17:34:20.8356539Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-gui3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3195 kB] 2021-05-16T17:34:21.7120329Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers amd64 3.10.4+dfsg-1ubuntu2 [1940 kB] 2021-05-16T17:34:21.7868524Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-core7 amd64 0.7-4ubuntu7 [81.7 kB] 2021-05-16T17:34:21.7878233Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdaemon0 amd64 0.14-7 [13.9 kB] 2021-05-16T17:34:21.7880713Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 avahi-daemon amd64 0.7-4ubuntu7 [61.0 kB] 2021-05-16T17:34:21.7886227Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4 [572 kB] 2021-05-16T17:34:21.7995528Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 blt amd64 2.5.3+dfsg-4 [4944 B] 2021-05-16T17:34:21.8164803Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 fonts-lyx all 2.3.4.2-2 [154 kB] 2021-05-16T17:34:21.8579785Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgck-1-0 amd64 3.36.0-2build1 [75.5 kB] 2021-05-16T17:34:21.8592015Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-base-3-1 amd64 3.36.0-2build1 [193 kB] 2021-05-16T17:34:21.8613319Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-ui-3-1 amd64 3.36.0-2build1 [127 kB] 2021-05-16T17:34:21.8629069Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gcr amd64 3.36.0-2build1 [63.9 kB] 2021-05-16T17:34:21.8638218Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-numpy amd64 1:1.17.4-5ubuntu3 [2725 kB] 2021-05-16T17:34:21.8864980Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-gdal amd64 3.0.4+dfsg-1build3 [527 kB] 2021-05-16T17:34:21.9238536Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-bin amd64 3.0.4+dfsg-1build3 [256 kB] 2021-05-16T17:34:21.9398908Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-glib1 amd64 0.7-4ubuntu7 [7804 B] 2021-05-16T17:34:21.9404923Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmm-glib0 amd64 1.12.8-1 [185 kB] 2021-05-16T17:34:21.9421884Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 geoclue-2.0 amd64 2.5.6-0ubuntu1 [91.9 kB] 2021-05-16T17:34:21.9457256Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit-modules amd64 0.23.20-1ubuntu0.1 [231 kB] 2021-05-16T17:34:21.9517332Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit amd64 0.23.20-1ubuntu0.1 [93.8 kB] 2021-05-16T17:34:21.9530048Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 pinentry-gnome3 amd64 1.1.0-3build1 [38.6 kB] 2021-05-16T17:34:21.9536987Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring amd64 3.36.0-1ubuntu1 [613 kB] 2021-05-16T17:34:21.9600930Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring-pkcs11 amd64 3.36.0-1ubuntu1 [28.0 kB] 2021-05-16T17:34:21.9882045Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-doc all 7.8.2-1build3 [32.4 MB] 2021-05-16T17:34:23.5762690Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblaszip8 amd64 3.4.3-1build1 [125 kB] 2021-05-16T17:34:23.5774630Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-util9 amd64 2.0.1+ds-1build3 [68.5 kB] 2021-05-16T17:34:23.5781876Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-base9 amd64 2.0.1+ds-1build3 [1739 kB] 2021-05-16T17:34:23.5927545Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-core amd64 7.8.2-1build3 [5737 kB] 2021-05-16T17:34:23.8789802Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdparanoia0 amd64 3.10.2+debian-13 [46.7 kB] 2021-05-16T17:34:23.8800668Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvisual-0.4-0 amd64 0.4.0-17 [99.8 kB] 2021-05-16T17:34:23.8809970Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gstreamer1.0-plugins-base amd64 1.16.2-4 [619 kB] 2021-05-16T17:34:23.8855851Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 iio-sensor-proxy amd64 2.8-1ubuntu1 [35.8 kB] 2021-05-16T17:34:23.9184927Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libassimp5 amd64 5.0.1~ds0-1build1 [2775 kB] 2021-05-16T17:34:24.0726320Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libexiv2-27 amd64 0.27.2-8ubuntu2.2 [788 kB] 2021-05-16T17:34:24.1630700Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi0ldbl amd64 2.4.0-10build1 [155 kB] 2021-05-16T17:34:24.1803113Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi-bin amd64 2.4.0-10build1 [10.5 kB] 2021-05-16T17:34:24.1806687Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimagequant0 amd64 2.12.2-1.1 [31.4 kB] 2021-05-16T17:34:24.2202066Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] 2021-05-16T17:34:24.2407699Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-glib4 amd64 1.22.0-2 [101 kB] 2021-05-16T17:34:24.2463207Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-proxy amd64 1.22.0-2 [5908 B] 2021-05-16T17:34:24.2487884Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-genl-3-200 amd64 3.4.0-1 [11.1 kB] 2021-05-16T17:34:24.2492845Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-route-3-200 amd64 3.4.0-1 [149 kB] 2021-05-16T17:34:24.2506332Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnss-mdns amd64 0.14.1-1ubuntu1 [22.9 kB] 2021-05-16T17:34:24.2512647Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpam-gnome-keyring amd64 3.36.0-1ubuntu1 [23.3 kB] 2021-05-16T17:34:24.2516807Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpcsclite1 amd64 1.8.26-3 [22.0 kB] 2021-05-16T17:34:24.2896348Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-faux amd64 2.0.1+ds-1build3 [27.3 kB] 2021-05-16T17:34:24.3054230Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-icebridge amd64 2.0.1+ds-1build3 [42.8 kB] 2021-05-16T17:34:24.3189157Z Get:131 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-pgpointcloud amd64 2.0.1+ds-1build3 [75.3 kB] 2021-05-16T17:34:24.3285307Z Get:132 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-python amd64 2.0.1+ds-1build3 [136 kB] 2021-05-16T17:34:24.3721158Z Get:133 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsqlite3-mod-spatialite amd64 4.3.0a-6build1 [1265 kB] 2021-05-16T17:34:24.4460930Z Get:134 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-sqlite amd64 2.0.1+ds-1build3 [89.5 kB] 2021-05-16T17:34:24.4540899Z Get:135 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugins amd64 2.0.1+ds-1build3 [12.9 kB] 2021-05-16T17:34:24.4582052Z Get:136 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dcore5 amd64 5.12.8+dfsg-0ubuntu1 [137 kB] 2021-05-16T17:34:24.4994774Z Get:137 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53drender5 amd64 5.12.8+dfsg-0ubuntu1 [689 kB] 2021-05-16T17:34:24.5313459Z Get:138 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53danimation5 amd64 5.12.8+dfsg-0ubuntu1 [159 kB] 2021-05-16T17:34:24.5454262Z Get:139 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dinput5 amd64 5.12.8+dfsg-0ubuntu1 [125 kB] 2021-05-16T17:34:24.5693769Z Get:140 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dlogic5 amd64 5.12.8+dfsg-0ubuntu1 [25.9 kB] 2021-05-16T17:34:24.6026538Z Get:141 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dextras5 amd64 5.12.8+dfsg-0ubuntu1 [157 kB] 2021-05-16T17:34:24.6318272Z Get:142 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-assimpsceneimport-plugin amd64 5.12.8+dfsg-0ubuntu1 [45.2 kB] 2021-05-16T17:34:24.6392967Z Get:143 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-defaultgeometryloader-plugin amd64 5.12.8+dfsg-0ubuntu1 [33.3 kB] 2021-05-16T17:34:24.6624378Z Get:144 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-gltfsceneio-plugin amd64 5.12.8+dfsg-0ubuntu1 [110 kB] 2021-05-16T17:34:24.6944600Z Get:145 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dquickscene2d5 amd64 5.12.8+dfsg-0ubuntu1 [38.4 kB] 2021-05-16T17:34:24.7008684Z Get:146 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-scene2d-plugin amd64 5.12.8+dfsg-0ubuntu1 [17.1 kB] 2021-05-16T17:34:24.7238940Z Get:147 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-3d3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [224 kB] 2021-05-16T17:34:24.7618850Z Get:148 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-analysis3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [927 kB] 2021-05-16T17:34:24.8018526Z Get:149 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-app3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3060 kB] 2021-05-16T17:34:24.9119900Z Get:150 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtchooser amd64 66-2build1 [24.7 kB] 2021-05-16T17:34:24.9122149Z Get:151 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qdoc-qt5 amd64 5.12.8-0ubuntu1 [507 kB] 2021-05-16T17:34:24.9495132Z Get:152 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5help5 amd64 5.12.8-0ubuntu1 [134 kB] 2021-05-16T17:34:24.9510230Z Get:153 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qhelpgenerator-qt5 amd64 5.12.8-0ubuntu1 [64.3 kB] 2021-05-16T17:34:24.9517153Z Get:154 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-assistant amd64 5.12.8-0ubuntu1 [369 kB] 2021-05-16T17:34:24.9554934Z Get:155 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtattributionsscanner-qt5 amd64 5.12.8-0ubuntu1 [26.0 kB] 2021-05-16T17:34:24.9557392Z Get:156 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designer5 amd64 5.12.8-0ubuntu1 [2778 kB] 2021-05-16T17:34:24.9757122Z Get:157 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designercomponents5 amd64 5.12.8-0ubuntu1 [718 kB] 2021-05-16T17:34:24.9812229Z Get:158 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttools5-dev-tools amd64 5.12.8-0ubuntu1 [1031 kB] 2021-05-16T17:34:24.9890746Z Get:159 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-customwidgets amd64 3.10.4+dfsg-1ubuntu2 [3397 kB] 2021-05-16T17:34:25.1180580Z Get:160 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-server3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [311 kB] 2021-05-16T17:34:25.1482917Z Get:161 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgisgrass7-3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [228 kB] 2021-05-16T17:34:25.2827266Z Get:162 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgispython3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [43.1 kB] 2021-05-16T17:34:25.2866514Z Get:163 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-glib5 amd64 1.24.8-1 [529 kB] 2021-05-16T17:34:25.2914971Z Get:164 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-proxy amd64 1.24.8-1 [5856 B] 2021-05-16T17:34:25.2918282Z Get:165 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5test5 amd64 5.12.8+dfsg-0ubuntu1 [131 kB] 2021-05-16T17:34:25.2931619Z Get:166 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-bin amd64 1.3-2ubuntu3 [5484 B] 2021-05-16T17:34:25.2934678Z Get:167 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 modemmanager amd64 1.12.8-1 [755 kB] 2021-05-16T17:34:25.3480444Z Get:168 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 ttf-bitstream-vera all 1.10-8 [352 kB] 2021-05-16T17:34:25.3742883Z Get:169 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python-matplotlib-data all 3.1.2-1ubuntu4 [3788 kB] 2021-05-16T17:34:25.5208123Z Get:170 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-soupsieve all 1.9.5+dfsg-1 [29.1 kB] 2021-05-16T17:34:25.5293172Z Get:171 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-bs4 all 4.8.2-1 [83.0 kB] 2021-05-16T17:34:25.5393831Z Get:172 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-cycler all 0.10.0-3 [8132 B] 2021-05-16T17:34:25.5778478Z Get:173 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-dateutil all 2.7.3-3ubuntu1 [63.3 kB] 2021-05-16T17:34:25.5862326Z Get:174 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-decorator all 4.4.2-0ubuntu1 [10.3 kB] 2021-05-16T17:34:25.6237358Z Get:175 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-future all 0.18.2-2 [336 kB] 2021-05-16T17:34:25.6430378Z Get:176 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-webencodings all 0.5.1-1ubuntu1 [11.0 kB] 2021-05-16T17:34:25.6473325Z Get:177 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-html5lib all 1.0.1-2 [84.3 kB] 2021-05-16T17:34:25.6699586Z Get:178 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-ipython-genutils all 0.2.0-1ubuntu1 [21.1 kB] 2021-05-16T17:34:25.6769982Z Get:179 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-traitlets all 4.3.3-3 [59.9 kB] 2021-05-16T17:34:25.6969489Z Get:180 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-jupyter-core all 4.6.3-3 [41.2 kB] 2021-05-16T17:34:25.7055874Z Get:181 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-kiwisolver amd64 1.0.1-3build1 [61.3 kB] 2021-05-16T17:34:25.7158857Z Get:182 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-lxml amd64 4.5.0-1ubuntu0.3 [1382 kB] 2021-05-16T17:34:25.7831833Z Get:183 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-pyparsing all 2.4.6-1 [61.3 kB] 2021-05-16T17:34:25.7875748Z Get:184 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-matplotlib amd64 3.1.2-1ubuntu4 [4459 kB] 2021-05-16T17:34:26.0164625Z Get:185 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-nbformat all 5.0.4-1 [29.8 kB] 2021-05-16T17:34:26.0183609Z Get:186 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-olefile all 0.46-2 [33.7 kB] 2021-05-16T17:34:26.0231635Z Get:187 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyproj amd64 2.5.0+ds-1 [297 kB] 2021-05-16T17:34:26.0385626Z Get:188 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-tz all 2019.3-1 [24.4 kB] 2021-05-16T17:34:26.0577881Z Get:189 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-owslib all 0.19.1-1 [115 kB] 2021-05-16T17:34:26.0671270Z Get:190 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-pil amd64 7.0.0-4ubuntu0.3 [363 kB] 2021-05-16T17:34:26.0896249Z Get:191 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-retrying all 1.3.3-4 [8160 B] 2021-05-16T17:34:26.1007121Z Get:192 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-plotly all 4.4.1+dfsg-1 [1960 kB] 2021-05-16T17:34:26.2061455Z Get:193 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-psycopg2 amd64 2.8.4-2 [112 kB] 2021-05-16T17:34:26.2096357Z Get:194 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-sip amd64 4.19.21+dfsg-1build1 [87.9 kB] 2021-05-16T17:34:26.2193179Z Get:195 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5 amd64 5.14.1+dfsg-3build1 [2318 kB] 2021-05-16T17:34:26.3177383Z Get:196 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qsci amd64 2.11.2+dfsg-6 [230 kB] 2021-05-16T17:34:26.3604872Z Get:197 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsql amd64 5.14.1+dfsg-3build1 [87.5 kB] 2021-05-16T17:34:26.3774729Z Get:198 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsvg amd64 5.14.1+dfsg-3build1 [26.9 kB] 2021-05-16T17:34:26.3844878Z Get:199 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtwebkit amd64 5.14.1+dfsg-3build1 [103 kB] 2021-05-16T17:34:26.3944571Z Get:200 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis-common all 3.10.4+dfsg-1ubuntu2 [2390 kB] 2021-05-16T17:34:26.4844177Z Get:201 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis amd64 3.10.4+dfsg-1ubuntu2 [7772 kB] 2021-05-16T17:34:26.7364938Z Get:202 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-tk amd64 3.8.5-1~20.04.1 [103 kB] 2021-05-16T17:34:26.7516940Z Get:203 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-leaflet all 1.6.0~dfsg-1 [313 kB] 2021-05-16T17:34:26.7910268Z Get:204 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-common all 3.10.4+dfsg-1ubuntu2 [16.7 MB] 2021-05-16T17:34:27.3326806Z Get:205 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis amd64 3.10.4+dfsg-1ubuntu2 [4788 kB] 2021-05-16T17:34:27.4762135Z Get:206 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass-common all 3.10.4+dfsg-1ubuntu2 [463 kB] 2021-05-16T17:34:27.5040325Z Get:207 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-provider-grass amd64 3.10.4+dfsg-1ubuntu2 [92.3 kB] 2021-05-16T17:34:27.5131441Z Get:208 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass amd64 3.10.4+dfsg-1ubuntu2 [601 kB] 2021-05-16T17:34:27.5363579Z Get:209 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-gtk-platformtheme amd64 5.12.8+dfsg-0ubuntu1 [124 kB] 2021-05-16T17:34:27.5472112Z Get:210 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttranslations5-l10n all 5.12.8-0ubuntu1 [1486 kB] 2021-05-16T17:34:27.5995639Z Get:211 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 wpasupplicant amd64 2:2.9-1ubuntu4.3 [1183 kB] 2021-05-16T17:34:27.6464839Z Get:212 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-bin amd64 6.3.1-1 [88.8 kB] 2021-05-16T17:34:27.6509141Z Get:213 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch-data all 20191128-3 [32.3 kB] 2021-05-16T17:34:27.6521584Z Get:214 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch amd64 2.5.2+repack0-2ubuntu3 [53.1 kB] 2021-05-16T17:34:28.6660474Z Fetched 183 MB in 9s (20.1 MB/s) 2021-05-16T17:34:28.6984202Z Selecting previously unselected package libdouble-conversion3:amd64. 2021-05-16T17:34:28.7059821Z (Reading database ... 2021-05-16T17:34:28.7060351Z (Reading database ... 5% 2021-05-16T17:34:28.7060808Z (Reading database ... 10% 2021-05-16T17:34:28.7061270Z (Reading database ... 15% 2021-05-16T17:34:28.7062364Z (Reading database ... 20% 2021-05-16T17:34:28.7062833Z (Reading database ... 25% 2021-05-16T17:34:28.7063288Z (Reading database ... 30% 2021-05-16T17:34:28.7063907Z (Reading database ... 35% 2021-05-16T17:34:28.7064476Z (Reading database ... 40% 2021-05-16T17:34:28.7065115Z (Reading database ... 45% 2021-05-16T17:34:28.7065664Z (Reading database ... 50% 2021-05-16T17:34:28.7102957Z (Reading database ... 55% 2021-05-16T17:34:28.7143220Z (Reading database ... 60% 2021-05-16T17:34:28.7171681Z (Reading database ... 65% 2021-05-16T17:34:28.7285608Z (Reading database ... 70% 2021-05-16T17:34:28.7393007Z (Reading database ... 75% 2021-05-16T17:34:28.7416542Z (Reading database ... 80% 2021-05-16T17:34:28.7766615Z (Reading database ... 85% 2021-05-16T17:34:28.8052263Z (Reading database ... 90% 2021-05-16T17:34:28.8127587Z (Reading database ... 95% 2021-05-16T17:34:28.8128130Z (Reading database ... 100% 2021-05-16T17:34:28.8128845Z (Reading database ... 269928 files and directories currently installed.) 2021-05-16T17:34:28.8242327Z Preparing to unpack .../000-libdouble-conversion3_3.1.5-4ubuntu1_amd64.deb ... 2021-05-16T17:34:28.8261159Z Unpacking libdouble-conversion3:amd64 (3.1.5-4ubuntu1) ... 2021-05-16T17:34:28.8557488Z Selecting previously unselected package libqt5core5a:amd64. 2021-05-16T17:34:28.8819624Z Preparing to unpack .../001-libqt5core5a_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-05-16T17:34:28.8892931Z Unpacking libqt5core5a:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:34:29.0615030Z Selecting previously unselected package libegl-mesa0:amd64. 2021-05-16T17:34:29.0893623Z Preparing to unpack .../002-libegl-mesa0_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-16T17:34:29.0902942Z Unpacking libegl-mesa0:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T17:34:29.1198154Z Selecting previously unselected package libegl1:amd64. 2021-05-16T17:34:29.1481822Z Preparing to unpack .../003-libegl1_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T17:34:29.1490815Z Unpacking libegl1:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:34:29.1751627Z Selecting previously unselected package libevdev2:amd64. 2021-05-16T17:34:29.2033716Z Preparing to unpack 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2021-05-16T17:35:00.8875713Z Setting up libkmldom1:amd64 (1.3.0-8build1) ... 2021-05-16T17:35:00.8894992Z Setting up libspatialite7:amd64 (4.3.0a-6build1) ... 2021-05-16T17:35:00.8917252Z Setting up libgcr-ui-3-1:amd64 (3.36.0-2build1) ... 2021-05-16T17:35:00.8938322Z Setting up python3-matplotlib (3.1.2-1ubuntu4) ... 2021-05-16T17:35:01.7847350Z Setting up libkmlengine1:amd64 (1.3.0-8build1) ... 2021-05-16T17:35:01.7867284Z Setting up libqt5keychain1:amd64 (0.10.0-1build1) ... 2021-05-16T17:35:01.7888291Z Setting up libsqlite3-mod-spatialite:amd64 (4.3.0a-6build1) ... 2021-05-16T17:35:01.7907477Z Setting up qdoc-qt5 (5.12.8-0ubuntu1) ... 2021-05-16T17:35:01.7937351Z Setting up libqt5positioning5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:01.7956938Z Setting up proj-bin (6.3.1-1) ... 2021-05-16T17:35:01.7974826Z Setting up libqca-qt5-2-plugins:amd64 (2.2.1-2build1) ... 2021-05-16T17:35:01.7995078Z Setting up libgstreamer-plugins-base1.0-0:amd64 (1.16.2-4) ... 2021-05-16T17:35:01.8014166Z Setting up geoclue-2.0 (2.5.6-0ubuntu1) ... 2021-05-16T17:35:02.1613682Z geoclue.service is a disabled or a static unit, not starting it. 2021-05-16T17:35:02.1638599Z Setting up libqt5serialport5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T17:35:02.1667950Z Setting up python3-nbformat (5.0.4-1) ... 2021-05-16T17:35:02.3195266Z Setting up libmbim-proxy (1.22.0-2) ... 2021-05-16T17:35:02.3218362Z Setting up python3-pyproj (2.5.0+ds-1) ... 2021-05-16T17:35:02.4747702Z Setting up libqt5network5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:02.4768207Z Setting up python3-bs4 (4.8.2-1) ... 2021-05-16T17:35:02.6553435Z Setting up libgeotiff5:amd64 (1.5.1-2) ... 2021-05-16T17:35:02.6577749Z Setting up gcr (3.36.0-2build1) ... 2021-05-16T17:35:02.6595282Z Setting up libqt5sql5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:02.6612817Z Setting up wpasupplicant (2:2.9-1ubuntu4.3) ... 2021-05-16T17:35:02.7817263Z Created symlink /etc/systemd/system/dbus-fi.w1.wpa_supplicant1.service → /lib/systemd/system/wpa_supplicant.service. 2021-05-16T17:35:02.7819764Z Created symlink /etc/systemd/system/multi-user.target.wants/wpa_supplicant.service → /lib/systemd/system/wpa_supplicant.service. 2021-05-16T17:35:03.2447231Z Setting up python3-pil:amd64 (7.0.0-4ubuntu0.3) ... 2021-05-16T17:35:03.4990263Z Setting up libqt5xml5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:03.5012244Z Setting up gstreamer1.0-plugins-base:amd64 (1.16.2-4) ... 2021-05-16T17:35:03.5030913Z Setting up libqt5qml5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T17:35:03.5061370Z Setting up qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T17:35:03.5086249Z Setting up qtattributionsscanner-qt5 (5.12.8-0ubuntu1) ... 2021-05-16T17:35:03.5108653Z Setting up libqt5webchannel5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T17:35:03.5135636Z Setting up python3-plotly (4.4.1+dfsg-1) ... 2021-05-16T17:35:03.6602175Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T17:35:03.6604075Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-05-16T17:35:03.6605545Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T17:35:03.6606901Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-05-16T17:35:03.6990601Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:194: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T17:35:03.6992104Z if direction is "increasing": 2021-05-16T17:35:03.6993587Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:199: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T17:35:03.6994662Z elif direction is "decreasing": 2021-05-16T17:35:03.7158534Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:176: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T17:35:03.7159698Z if direction is "increasing": 2021-05-16T17:35:03.7161126Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:179: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T17:35:03.7162150Z elif direction is "decreasing": 2021-05-16T17:35:04.5865187Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:460: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T17:35:04.5866701Z if props["offset_coordinates"] is "data": 2021-05-16T17:35:04.5868538Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:572: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-05-16T17:35:04.5869791Z if props["coordinates"] is not "data": 2021-05-16T17:35:05.3115807Z Setting up avahi-daemon (0.7-4ubuntu7) ... 2021-05-16T17:35:05.8377043Z Created symlink /etc/systemd/system/dbus-org.freedesktop.Avahi.service → /lib/systemd/system/avahi-daemon.service. 2021-05-16T17:35:05.8379531Z Created symlink /etc/systemd/system/multi-user.target.wants/avahi-daemon.service → /lib/systemd/system/avahi-daemon.service. 2021-05-16T17:35:05.8381635Z Created symlink /etc/systemd/system/sockets.target.wants/avahi-daemon.socket → /lib/systemd/system/avahi-daemon.socket. 2021-05-16T17:35:06.8813613Z Setting up libnss-mdns:amd64 (0.14.1-1ubuntu1) ... 2021-05-16T17:35:06.8857375Z First installation detected... 2021-05-16T17:35:06.8858574Z Checking NSS setup... 2021-05-16T17:35:06.8903537Z Setting up libwacom2:amd64 (1.3-2ubuntu3) ... 2021-05-16T17:35:06.8931009Z Setting up libqt5sql5-sqlite:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:06.8952433Z Setting up python3-owslib (0.19.1-1) ... 2021-05-16T17:35:07.1539714Z Setting up libgdal26 (3.0.4+dfsg-1build3) ... 2021-05-16T17:35:07.1567860Z Setting up libqmi-glib5:amd64 (1.24.8-1) ... 2021-05-16T17:35:07.1602656Z Setting up libpdal-base9 (2.0.1+ds-1build3) ... 2021-05-16T17:35:07.1629831Z Setting up libinput-bin (1.15.5-1ubuntu0.2) ... 2021-05-16T17:35:07.1655889Z Setting up libwacom-bin (1.3-2ubuntu3) ... 2021-05-16T17:35:07.1680338Z Setting up libpdal-plugin-pgpointcloud (2.0.1+ds-1build3) ... 2021-05-16T17:35:07.1712610Z Setting up libpdal-plugin-icebridge (2.0.1+ds-1build3) ... 2021-05-16T17:35:07.1753339Z Setting up libpdal-plugin-python (2.0.1+ds-1build3) ... 2021-05-16T17:35:07.1773690Z Setting up python3-gdal (3.0.4+dfsg-1build3) ... 2021-05-16T17:35:07.3577718Z Setting up libinput10:amd64 (1.15.5-1ubuntu0.2) ... 2021-05-16T17:35:07.3612371Z Setting up libpdal-plugin-faux (2.0.1+ds-1build3) ... 2021-05-16T17:35:07.3640883Z Setting up grass-core (7.8.2-1build3) ... 2021-05-16T17:35:07.6890448Z /usr/lib/grass78/etc/python/grass/pygrass/gis/__init__.py:75: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T17:35:07.6892373Z if value is '': 2021-05-16T17:35:07.7829683Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T17:35:07.7830758Z if do_profiling is "True" or do_profiling is "1": 2021-05-16T17:35:07.7831829Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T17:35:07.7832781Z if do_profiling is "True" or do_profiling is "1": 2021-05-16T17:35:07.7833859Z /usr/lib/grass78/etc/python/grass/temporal/core.py:582: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-05-16T17:35:07.7834824Z if driver_string is not None and driver_string is not "": 2021-05-16T17:35:07.8250925Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T17:35:07.8252248Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-05-16T17:35:07.8253457Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T17:35:07.8254697Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-05-16T17:35:07.8851755Z Setting up libpdal-plugin-sqlite (2.0.1+ds-1build3) ... 2021-05-16T17:35:07.8872352Z Setting up libqt5gui5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:07.8953147Z Setting up libqmi-proxy (1.24.8-1) ... 2021-05-16T17:35:07.8974132Z Setting up libqt5widgets5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:07.8993939Z Setting up libqt53dcore5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:07.9146026Z Setting up libqt5help5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T17:35:07.9171641Z Setting up libqt53dlogic5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:07.9195307Z Setting up qt5-gtk-platformtheme:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:07.9215841Z Setting up libqgis-native3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T17:35:07.9243595Z Setting up libqt5printsupport5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:07.9277122Z Setting up gdal-bin (3.0.4+dfsg-1build3) ... 2021-05-16T17:35:08.0082618Z Setting up qt5-image-formats-plugins:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T17:35:08.0102634Z Setting up libqt53dinput5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:08.0121582Z Setting up libqt5opengl5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:08.0143288Z Setting up modemmanager (1.12.8-1) ... 2021-05-16T17:35:08.1332001Z Created symlink /etc/systemd/system/dbus-org.freedesktop.ModemManager1.service → /lib/systemd/system/ModemManager.service. 2021-05-16T17:35:08.1334610Z Created symlink /etc/systemd/system/multi-user.target.wants/ModemManager.service → /lib/systemd/system/ModemManager.service. 2021-05-16T17:35:08.6300025Z Setting up libqt5quick5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T17:35:08.6338359Z Setting up libqt5designer5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T17:35:08.6382805Z Setting up libpdal-plugins (2.0.1+ds-1build3) ... 2021-05-16T17:35:08.6405469Z Setting up libqt5svg5:amd64 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2021-05-16T17:35:08.6695605Z Setting up qt5-assistant (5.12.8-0ubuntu1) ... 2021-05-16T17:35:08.6714437Z Setting up qttools5-dev-tools (5.12.8-0ubuntu1) ... 2021-05-16T17:35:08.6732598Z Setting up libqgispython3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T17:35:08.6752907Z Setting up qt3d-scene2d-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:08.6771473Z Setting up python3-pyqt5 (5.14.1+dfsg-3build1) ... 2021-05-16T17:35:08.8300545Z Setting up python3-pyqt5.qtsvg (5.14.1+dfsg-3build1) ... 2021-05-16T17:35:08.8323992Z Setting up libqt53danimation5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:08.8342418Z Setting up qt3d-defaultgeometryloader-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:08.8358763Z Setting up qgis-providers (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T17:35:38.7464674Z Setting up libqt53dextras5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:38.7485001Z Setting up python3-pyqt5.qtsql (5.14.1+dfsg-3build1) ... 2021-05-16T17:35:38.7505534Z Setting up libqgis-customwidgets (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T17:35:38.7524152Z Setting up qt3d-gltfsceneio-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:38.7540829Z Setting up libqgis-server3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T17:35:38.7558885Z Setting up libqgisgrass7-3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T17:35:38.7584531Z Setting up qt3d-assimpsceneimport-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T17:35:38.7601711Z Setting up python3-qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T17:35:38.8973743Z Setting up libqgis-3d3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T17:35:38.8994356Z Setting up python3-pyqt5.qtwebkit (5.14.1+dfsg-3build1) ... 2021-05-16T17:35:38.9022159Z Setting up qgis-provider-grass (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T17:35:38.9039896Z Setting up python3-pyqt5.qsci (2.11.2+dfsg-6) ... 2021-05-16T17:35:38.9063816Z Setting up python3-qgis (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T17:35:39.0595466Z Setting up libqgis-app3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T17:35:39.0633220Z Setting up qgis (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T17:35:39.0662349Z Setting up qgis-plugin-grass (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T17:35:39.0776558Z Processing triggers for dbus (1.12.16-2ubuntu2.1) ... 2021-05-16T17:35:39.0873321Z Processing triggers for shared-mime-info (1.15-1) ... 2021-05-16T17:35:39.8373545Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-16T17:35:39.8531138Z Processing triggers for mime-support (3.64ubuntu1) ... 2021-05-16T17:35:39.8761519Z Processing triggers for hicolor-icon-theme (0.17-2) ... 2021-05-16T17:35:39.8908829Z Processing triggers for libglib2.0-0:amd64 (2.64.6-1~ubuntu20.04.3) ... 2021-05-16T17:35:39.9791192Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:35:40.0074438Z Processing triggers for systemd (245.4-4ubuntu3.6) ... 2021-05-16T17:35:40.2433131Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:35:50.6172380Z Setting up pinentry-gnome3 (1.1.0-3build1) ... 2021-05-16T17:35:50.6385806Z Setting up gnome-keyring (3.36.0-1ubuntu1) ... 2021-05-16T17:35:52.4936878Z ##[group]Run adigherman/actions/get-repo-name@master 2021-05-16T17:35:52.4937392Z with: 2021-05-16T17:35:52.4937818Z github_slug: neuroconductor/brainR 2021-05-16T17:35:52.4938240Z env: 2021-05-16T17:35:52.4938634Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:35:52.4939073Z TIC_DEPLOY_KEY: 2021-05-16T17:35:52.4939825Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:35:52.4941454Z GITHUB_PAT: *** 2021-05-16T17:35:52.4941840Z COVERALLS_TOKEN: 2021-05-16T17:35:52.4942272Z continue-on-error: true 2021-05-16T17:35:52.4942712Z VDIFFR_RUN_TESTS: 2021-05-16T17:35:52.4943144Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:35:52.4943563Z TZ: UTC 2021-05-16T17:35:52.4943922Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:35:52.4944303Z NOT_CRAN: true 2021-05-16T17:35:52.4944644Z ##[endgroup] 2021-05-16T17:35:52.5254712Z repo slug is: neuroconductor/brainR 2021-05-16T17:35:52.5387306Z ##[group]Run adigherman/actions/get-repo-version@master 2021-05-16T17:35:52.5387837Z env: 2021-05-16T17:35:52.5388238Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:35:52.5388678Z TIC_DEPLOY_KEY: 2021-05-16T17:35:52.5389422Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:35:52.5390697Z GITHUB_PAT: *** 2021-05-16T17:35:52.5391061Z COVERALLS_TOKEN: 2021-05-16T17:35:52.5391504Z continue-on-error: true 2021-05-16T17:35:52.5391956Z VDIFFR_RUN_TESTS: 2021-05-16T17:35:52.5392406Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:35:52.5392813Z TZ: UTC 2021-05-16T17:35:52.5393164Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:35:52.5393542Z NOT_CRAN: true 2021-05-16T17:35:52.5393878Z ##[endgroup] 2021-05-16T17:35:52.7230001Z ##[group]Run adigherman/actions/get-release-asset@master 2021-05-16T17:35:52.7230659Z with: 2021-05-16T17:35:52.7230987Z repo_name: brainR 2021-05-16T17:35:52.7231357Z repo_version: 1.6.0 2021-05-16T17:35:52.7231705Z runner_os: Linux 2021-05-16T17:35:52.7232053Z R_version: 4.1 2021-05-16T17:35:52.7232362Z env: 2021-05-16T17:35:52.7232765Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:35:52.7233188Z TIC_DEPLOY_KEY: 2021-05-16T17:35:52.7233930Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:35:52.7235601Z GITHUB_PAT: *** 2021-05-16T17:35:52.7235966Z COVERALLS_TOKEN: 2021-05-16T17:35:52.7236413Z continue-on-error: true 2021-05-16T17:35:52.7236835Z VDIFFR_RUN_TESTS: 2021-05-16T17:35:52.7237285Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:35:52.7237681Z TZ: UTC 2021-05-16T17:35:52.7238042Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:35:52.7238415Z NOT_CRAN: true 2021-05-16T17:35:52.7238770Z ##[endgroup] 2021-05-16T17:35:52.7560620Z Package: brainR 2021-05-16T17:35:52.7564933Z Version: 1.6.0 2021-05-16T17:35:52.7566016Z OS: Linux 2021-05-16T17:35:52.7648730Z ##[group]Run install.packages('remotes') 2021-05-16T17:35:52.7649359Z install.packages('remotes') 2021-05-16T17:35:52.7650095Z saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) 2021-05-16T17:35:52.7651009Z writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") 2021-05-16T17:35:52.7658163Z shell: /usr/local/bin/Rscript {0} 2021-05-16T17:35:52.7658550Z env: 2021-05-16T17:35:52.7658948Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:35:52.7659387Z TIC_DEPLOY_KEY: 2021-05-16T17:35:52.7660131Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:35:52.7661361Z GITHUB_PAT: *** 2021-05-16T17:35:52.7661728Z COVERALLS_TOKEN: 2021-05-16T17:35:52.7662162Z continue-on-error: true 2021-05-16T17:35:52.7662595Z VDIFFR_RUN_TESTS: 2021-05-16T17:35:52.7663026Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:35:52.7663450Z TZ: UTC 2021-05-16T17:35:52.7663813Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:35:52.7664188Z NOT_CRAN: true 2021-05-16T17:35:52.7664522Z ##[endgroup] 2021-05-16T17:35:52.9217801Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T17:35:52.9218963Z (as ‘lib’ is unspecified) 2021-05-16T17:36:07.7218206Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/remotes_2.3.0.tar.gz' 2021-05-16T17:36:08.1224712Z Content type 'binary/octet-stream' length 148709 bytes (145 KB) 2021-05-16T17:36:08.1345188Z ================================================== 2021-05-16T17:36:08.1346085Z downloaded 145 KB 2021-05-16T17:36:08.1346604Z 2021-05-16T17:36:08.4087559Z * installing *source* package ‘remotes’ ... 2021-05-16T17:36:08.4128033Z ** package ‘remotes’ successfully unpacked and MD5 sums checked 2021-05-16T17:36:08.4129204Z ** using staged installation 2021-05-16T17:36:08.4290314Z ** R 2021-05-16T17:36:08.4471132Z ** inst 2021-05-16T17:36:08.4482506Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:36:10.1094369Z ** help 2021-05-16T17:36:10.1943654Z *** installing help indices 2021-05-16T17:36:10.2500244Z ** building package indices 2021-05-16T17:36:10.4734962Z ** installing vignettes 2021-05-16T17:36:10.4798922Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:36:10.6491866Z ** testing if installed package can be loaded from final location 2021-05-16T17:36:10.8498831Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:36:10.8519007Z * DONE (remotes) 2021-05-16T17:36:10.8583682Z 2021-05-16T17:36:10.8584591Z The downloaded source packages are in 2021-05-16T17:36:10.8586118Z ‘/tmp/RtmpvOQtUq/downloaded_packages’ 2021-05-16T17:36:29.7388524Z ##[group]Run actions/cache@v1 2021-05-16T17:36:29.7388911Z with: 2021-05-16T17:36:29.7389317Z path: /home/runner/work/_temp/Library 2021-05-16T17:36:29.7392131Z key: Linux-e3adb7ee20b68d8bd651f6f30d4cc1690a70853cf8f0c4dcbc5c14b00f693a6a-1-e0210dab80334f2cfd89158d3eca5b6919d1328c7b5e9f2da73a8cadc8155dcc 2021-05-16T17:36:29.7395901Z restore-keys: Linux-e3adb7ee20b68d8bd651f6f30d4cc1690a70853cf8f0c4dcbc5c14b00f693a6a-1- 2021-05-16T17:36:29.7397064Z env: 2021-05-16T17:36:29.7397463Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:36:29.7397899Z TIC_DEPLOY_KEY: 2021-05-16T17:36:29.7398693Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:36:29.7400436Z GITHUB_PAT: *** 2021-05-16T17:36:29.7400800Z COVERALLS_TOKEN: 2021-05-16T17:36:29.7401248Z continue-on-error: true 2021-05-16T17:36:29.7401688Z VDIFFR_RUN_TESTS: 2021-05-16T17:36:29.7402125Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:36:29.7402585Z TZ: UTC 2021-05-16T17:36:29.7402952Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:36:29.7403327Z NOT_CRAN: true 2021-05-16T17:36:29.7403677Z ##[endgroup] 2021-05-16T17:36:29.7806530Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-05-16T17:36:29.7864106Z ##[group]Run Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-05-16T17:36:29.7864834Z Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-05-16T17:36:29.7865527Z sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") 2021-05-16T17:36:29.7866112Z sudo -s eval "$sysreqs" 2021-05-16T17:36:29.7908428Z shell: /usr/bin/bash -e {0} 2021-05-16T17:36:29.7908776Z env: 2021-05-16T17:36:29.7909198Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:36:29.7909620Z TIC_DEPLOY_KEY: 2021-05-16T17:36:29.7910375Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:36:29.7911620Z GITHUB_PAT: *** 2021-05-16T17:36:29.7911977Z COVERALLS_TOKEN: 2021-05-16T17:36:29.7912428Z continue-on-error: true 2021-05-16T17:36:29.7912861Z VDIFFR_RUN_TESTS: 2021-05-16T17:36:29.7913310Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:36:29.7913721Z TZ: UTC 2021-05-16T17:36:29.7914098Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:36:29.7914481Z NOT_CRAN: true 2021-05-16T17:36:29.7914911Z RHUB_PLATFORM: linux-x86_64-ubuntu-gcc 2021-05-16T17:36:29.7915358Z ##[endgroup] 2021-05-16T17:36:29.9845132Z Using github PAT from envvar GITHUB_PAT 2021-05-16T17:36:30.5155671Z Downloading GitHub repo r-hub/sysreqs@HEAD 2021-05-16T17:36:46.0222893Z rprojroot (NA -> 2.0.2) [CRAN] 2021-05-16T17:36:46.0234865Z crayon (NA -> 1.4.1) [CRAN] 2021-05-16T17:36:46.0235874Z R6 (NA -> 2.5.0) [CRAN] 2021-05-16T17:36:46.0236667Z desc (NA -> 1.3.0) [CRAN] 2021-05-16T17:36:46.0237466Z debugme (NA -> 1.1.0) [CRAN] 2021-05-16T17:36:46.0247236Z Installing 5 packages: rprojroot, crayon, R6, desc, debugme 2021-05-16T17:36:46.0258903Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T17:36:46.0259743Z (as ‘lib’ is unspecified) 2021-05-16T17:36:59.9303048Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rprojroot_2.0.2.tar.gz' 2021-05-16T17:37:00.6541663Z Content type 'binary/octet-stream' length 61445 bytes (60 KB) 2021-05-16T17:37:00.6542379Z ================================================== 2021-05-16T17:37:00.6542860Z downloaded 60 KB 2021-05-16T17:37:00.6543172Z 2021-05-16T17:37:00.6577772Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/crayon_1.4.1.tar.gz' 2021-05-16T17:37:01.0745642Z Content type 'binary/octet-stream' length 35834 bytes (34 KB) 2021-05-16T17:37:01.0748001Z ================================================== 2021-05-16T17:37:01.0748878Z downloaded 34 KB 2021-05-16T17:37:01.0749439Z 2021-05-16T17:37:01.0783385Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R6_2.5.0.tar.gz' 2021-05-16T17:37:01.7340473Z Content type 'binary/octet-stream' length 64110 bytes (62 KB) 2021-05-16T17:37:01.7341181Z ================================================== 2021-05-16T17:37:01.7341925Z downloaded 62 KB 2021-05-16T17:37:01.7342231Z 2021-05-16T17:37:01.7377174Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/desc_1.3.0.tar.gz' 2021-05-16T17:37:02.2440536Z Content type 'binary/octet-stream' length 292756 bytes (285 KB) 2021-05-16T17:37:02.2613685Z ================================================== 2021-05-16T17:37:02.2614445Z downloaded 285 KB 2021-05-16T17:37:02.2614752Z 2021-05-16T17:37:02.2652553Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/debugme_1.1.0.tar.gz' 2021-05-16T17:37:02.9210128Z Content type 'application/x-tar' length 997019 bytes (973 KB) 2021-05-16T17:37:02.9513371Z ================================================== 2021-05-16T17:37:02.9514226Z downloaded 973 KB 2021-05-16T17:37:02.9514693Z 2021-05-16T17:37:03.1885826Z * installing *source* package ‘rprojroot’ ... 2021-05-16T17:37:03.1907978Z ** package ‘rprojroot’ successfully unpacked and MD5 sums checked 2021-05-16T17:37:03.1909280Z ** using staged installation 2021-05-16T17:37:03.2037766Z ** R 2021-05-16T17:37:03.2080555Z ** inst 2021-05-16T17:37:03.2089342Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:37:03.6514469Z ** help 2021-05-16T17:37:03.6764641Z *** installing help indices 2021-05-16T17:37:03.7027290Z *** copying figures 2021-05-16T17:37:03.7031739Z ** building package indices 2021-05-16T17:37:03.8894943Z ** installing vignettes 2021-05-16T17:37:03.8939124Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:37:04.0588426Z ** testing if installed package can be loaded from final location 2021-05-16T17:37:04.2284834Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:37:04.2292699Z * DONE (rprojroot) 2021-05-16T17:37:04.4535612Z * installing *source* package ‘crayon’ ... 2021-05-16T17:37:04.4553168Z ** package ‘crayon’ successfully unpacked and MD5 sums checked 2021-05-16T17:37:04.4554216Z ** using staged installation 2021-05-16T17:37:04.4678595Z ** R 2021-05-16T17:37:04.4761050Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:37:05.2425387Z ** help 2021-05-16T17:37:05.2943734Z *** installing help indices 2021-05-16T17:37:05.3297793Z ** building package indices 2021-05-16T17:37:05.5407990Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:37:05.7076799Z ** testing if installed package can be loaded from final location 2021-05-16T17:37:05.8854041Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:37:05.8865313Z * DONE (crayon) 2021-05-16T17:37:06.1040920Z * installing *source* package ‘R6’ ... 2021-05-16T17:37:06.1055033Z ** package ‘R6’ successfully unpacked and MD5 sums checked 2021-05-16T17:37:06.1056001Z ** using staged installation 2021-05-16T17:37:06.1175454Z ** R 2021-05-16T17:37:06.1237030Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:37:06.5699463Z ** help 2021-05-16T17:37:06.5893304Z *** installing help indices 2021-05-16T17:37:06.6079660Z *** copying figures 2021-05-16T17:37:06.6083126Z ** building package indices 2021-05-16T17:37:06.7924536Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:37:06.9582830Z ** testing if installed package can be loaded from final location 2021-05-16T17:37:07.1267536Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:37:07.1274656Z * DONE (R6) 2021-05-16T17:37:07.4139761Z * installing *source* package ‘desc’ ... 2021-05-16T17:37:07.4187075Z ** package ‘desc’ successfully unpacked and MD5 sums checked 2021-05-16T17:37:07.4188090Z ** using staged installation 2021-05-16T17:37:07.4331162Z ** R 2021-05-16T17:37:07.4449482Z ** inst 2021-05-16T17:37:07.4463324Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:37:08.8560825Z ** help 2021-05-16T17:37:08.9782827Z *** installing help indices 2021-05-16T17:37:09.0594202Z ** building package indices 2021-05-16T17:37:09.3160092Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:37:09.4946052Z ** testing if installed package can be loaded from final location 2021-05-16T17:37:09.6984723Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:37:09.7001414Z * DONE (desc) 2021-05-16T17:37:09.9378533Z * installing *source* package ‘debugme’ ... 2021-05-16T17:37:09.9410801Z ** package ‘debugme’ successfully unpacked and MD5 sums checked 2021-05-16T17:37:09.9411950Z ** using staged installation 2021-05-16T17:37:09.9512882Z ** R 2021-05-16T17:37:09.9542665Z ** inst 2021-05-16T17:37:09.9563037Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:37:10.2494904Z ** help 2021-05-16T17:37:10.2601157Z *** installing help indices 2021-05-16T17:37:10.2804074Z ** building package indices 2021-05-16T17:37:10.4603801Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:37:10.6327569Z ** testing if installed package can be loaded from final location 2021-05-16T17:37:10.8027547Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:37:10.8033160Z * DONE (debugme) 2021-05-16T17:37:10.8102973Z 2021-05-16T17:37:10.8103688Z The downloaded source packages are in 2021-05-16T17:37:10.8104896Z ‘/tmp/RtmpFVwzGT/downloaded_packages’ 2021-05-16T17:37:10.8105425Z Running `R CMD build`... 2021-05-16T17:37:11.0297550Z * checking for file ‘/tmp/RtmpFVwzGT/remotes690f295ddba8/r-hub-sysreqs-f068afa/DESCRIPTION’ ... OK 2021-05-16T17:37:11.0298829Z * preparing ‘sysreqs’: 2021-05-16T17:37:11.0299715Z * checking DESCRIPTION meta-information ... OK 2021-05-16T17:37:11.0300835Z * checking for LF line-endings in source and make files and shell scripts 2021-05-16T17:37:11.0301709Z * checking for empty or unneeded directories 2021-05-16T17:37:11.0302569Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-16T17:37:11.0303359Z * building ‘sysreqs_1.0.0.9000.tar.gz’ 2021-05-16T17:37:11.0305552Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T17:37:11.0306572Z (as ‘lib’ is unspecified) 2021-05-16T17:37:11.2246060Z * installing *source* package ‘sysreqs’ ... 2021-05-16T17:37:11.2247556Z ** using staged installation 2021-05-16T17:37:11.2370256Z ** R 2021-05-16T17:37:11.2401657Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:37:11.5814616Z ** help 2021-05-16T17:37:11.6005754Z *** installing help indices 2021-05-16T17:37:11.6166206Z ** building package indices 2021-05-16T17:37:11.7993310Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:37:11.9798926Z ** testing if installed package can be loaded from final location 2021-05-16T17:37:12.1608805Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:37:12.1614263Z * DONE (sysreqs) 2021-05-16T17:37:28.6978873Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-05-16T17:37:28.6981153Z Hit:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease 2021-05-16T17:37:28.6982775Z Hit:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease 2021-05-16T17:37:28.7759583Z Hit:4 https://download.mono-project.com/repo/ubuntu stable-focal InRelease 2021-05-16T17:37:28.8051841Z Hit:5 http://security.ubuntu.com/ubuntu focal-security InRelease 2021-05-16T17:37:28.8473764Z Hit:6 http://ppa.launchpad.net/apt-fast/stable/ubuntu focal InRelease 2021-05-16T17:37:28.9533671Z Hit:7 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease 2021-05-16T17:37:29.0052579Z Hit:8 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease 2021-05-16T17:37:29.1636271Z Hit:9 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-05-16T17:37:30.3216602Z Reading package lists... 2021-05-16T17:37:30.3946568Z Reading package lists... 2021-05-16T17:37:30.5459667Z Building dependency tree... 2021-05-16T17:37:30.5481321Z Reading state information... 2021-05-16T17:37:30.6931678Z libglu1-mesa-dev is already the newest version (9.0.1-1build1). 2021-05-16T17:37:30.6934741Z libicu-dev is already the newest version (66.1-2ubuntu2). 2021-05-16T17:37:30.6938838Z libicu-dev set to manually installed. 2021-05-16T17:37:30.6939809Z libpng-dev is already the newest version (1.6.37-2). 2021-05-16T17:37:30.6940695Z make is already the newest version (4.2.1-1.2). 2021-05-16T17:37:30.6941344Z make set to manually installed. 2021-05-16T17:37:30.6942282Z libssl-dev is already the newest version (1.1.1f-1ubuntu2.3). 2021-05-16T17:37:30.6943399Z zlib1g-dev is already the newest version (1:1.2.11.dfsg-2ubuntu1.2). 2021-05-16T17:37:30.6944562Z imagemagick is already the newest version (8:6.9.10.23+dfsg-2.1ubuntu11.2). 2021-05-16T17:37:30.6945560Z pandoc is already the newest version (2.7.3-1). 2021-05-16T17:37:30.6946355Z The following additional packages will be installed: 2021-05-16T17:37:30.6947669Z libbibutils6 libegl-dev libghc-pandoc-citeproc-data libgles-dev libgles1 2021-05-16T17:37:30.6948932Z libgles2 libglvnd-dev libopengl-dev libopengl0 2021-05-16T17:37:30.6949607Z Suggested packages: 2021-05-16T17:37:30.6950530Z libcurl4-doc libidn11-dev libldap2-dev librtmp-dev 2021-05-16T17:37:30.7392987Z The following NEW packages will be installed: 2021-05-16T17:37:30.7396399Z libbibutils6 libcurl4-openssl-dev libegl-dev libghc-pandoc-citeproc-data 2021-05-16T17:37:30.7399962Z libgl1-mesa-dev libgles-dev libgles1 libgles2 libglvnd-dev libopengl-dev 2021-05-16T17:37:30.7406696Z libopengl0 pandoc-citeproc 2021-05-16T17:37:30.7627324Z 0 upgraded, 12 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T17:37:30.7627993Z Need to get 13.8 MB of archives. 2021-05-16T17:37:30.7628658Z After this operation, 110 MB of additional disk space will be used. 2021-05-16T17:37:30.7630109Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbibutils6 amd64 6.2-1 [365 kB] 2021-05-16T17:37:30.7815373Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcurl4-openssl-dev amd64 7.68.0-1ubuntu2.5 [321 kB] 2021-05-16T17:37:30.8031576Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [17.2 kB] 2021-05-16T17:37:30.8178335Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgles1 amd64 1.3.2-1~ubuntu0.20.04.1 [10.3 kB] 2021-05-16T17:37:30.8293764Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgles2 amd64 1.3.2-1~ubuntu0.20.04.1 [15.6 kB] 2021-05-16T17:37:30.8388203Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgles-dev amd64 1.3.2-1~ubuntu0.20.04.1 [48.0 kB] 2021-05-16T17:37:30.8491762Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopengl0 amd64 1.3.2-1~ubuntu0.20.04.1 [29.3 kB] 2021-05-16T17:37:30.8584152Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopengl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [3584 B] 2021-05-16T17:37:30.8872472Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libghc-pandoc-citeproc-data all 0.15.0.1-1build4 [51.1 kB] 2021-05-16T17:37:30.8968991Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libglvnd-dev amd64 1.3.2-1~ubuntu0.20.04.1 [11.6 kB] 2021-05-16T17:37:30.9035989Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgl1-mesa-dev amd64 20.2.6-0ubuntu0.20.04.1 [6280 B] 2021-05-16T17:37:30.9419167Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 pandoc-citeproc amd64 0.15.0.1-1build4 [12.9 MB] 2021-05-16T17:37:31.7613002Z Fetched 13.8 MB in 1s (23.1 MB/s) 2021-05-16T17:37:31.7936829Z Selecting previously unselected package libbibutils6. 2021-05-16T17:37:31.8022146Z (Reading database ... 2021-05-16T17:37:31.8025455Z (Reading database ... 5% 2021-05-16T17:37:31.8025937Z (Reading database ... 10% 2021-05-16T17:37:31.8026393Z (Reading database ... 15% 2021-05-16T17:37:31.8027305Z (Reading database ... 20% 2021-05-16T17:37:31.8027755Z (Reading database ... 25% 2021-05-16T17:37:31.8028211Z (Reading database ... 30% 2021-05-16T17:37:31.8028663Z (Reading database ... 35% 2021-05-16T17:37:31.8029118Z (Reading database ... 40% 2021-05-16T17:37:31.8029751Z (Reading database ... 45% 2021-05-16T17:37:31.8030238Z (Reading database ... 50% 2021-05-16T17:37:31.8071901Z (Reading database ... 55% 2021-05-16T17:37:31.8120087Z (Reading database ... 60% 2021-05-16T17:37:31.8161087Z (Reading database ... 65% 2021-05-16T17:37:31.8264113Z (Reading database ... 70% 2021-05-16T17:37:31.8376002Z (Reading database ... 75% 2021-05-16T17:37:31.8633040Z (Reading database ... 80% 2021-05-16T17:37:31.8740282Z (Reading database ... 85% 2021-05-16T17:37:31.9145834Z (Reading database ... 90% 2021-05-16T17:37:31.9227770Z (Reading database ... 95% 2021-05-16T17:37:31.9228354Z (Reading database ... 100% 2021-05-16T17:37:31.9229157Z (Reading database ... 285139 files and directories currently installed.) 2021-05-16T17:37:31.9368171Z Preparing to unpack .../00-libbibutils6_6.2-1_amd64.deb ... 2021-05-16T17:37:31.9390938Z Unpacking libbibutils6 (6.2-1) ... 2021-05-16T17:37:32.0095689Z Selecting previously unselected package libcurl4-openssl-dev:amd64. 2021-05-16T17:37:32.0359219Z Preparing to unpack .../01-libcurl4-openssl-dev_7.68.0-1ubuntu2.5_amd64.deb ... 2021-05-16T17:37:32.0377579Z Unpacking libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-05-16T17:37:32.0975577Z Selecting previously unselected package libegl-dev:amd64. 2021-05-16T17:37:32.1208271Z Preparing to unpack .../02-libegl-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T17:37:32.1220020Z Unpacking libegl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:37:32.1535010Z Selecting previously unselected package libgles1:amd64. 2021-05-16T17:37:32.1777677Z Preparing to unpack .../03-libgles1_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T17:37:32.1800962Z Unpacking libgles1:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:37:32.2094846Z Selecting previously unselected package libgles2:amd64. 2021-05-16T17:37:32.2346183Z Preparing to unpack .../04-libgles2_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T17:37:32.2354656Z Unpacking libgles2:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:37:32.2655641Z Selecting previously unselected package libgles-dev:amd64. 2021-05-16T17:37:32.2876821Z Preparing to unpack .../05-libgles-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T17:37:32.2887101Z Unpacking libgles-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:37:32.3214786Z Selecting previously unselected package libopengl0:amd64. 2021-05-16T17:37:32.3470568Z Preparing to unpack .../06-libopengl0_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T17:37:32.3480549Z Unpacking libopengl0:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:37:32.3735445Z Selecting previously unselected package libopengl-dev:amd64. 2021-05-16T17:37:32.4022277Z Preparing to unpack .../07-libopengl-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T17:37:32.4031076Z Unpacking libopengl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:37:32.4335549Z Selecting previously unselected package libghc-pandoc-citeproc-data. 2021-05-16T17:37:32.4585852Z Preparing to unpack .../08-libghc-pandoc-citeproc-data_0.15.0.1-1build4_all.deb ... 2021-05-16T17:37:32.4609828Z Unpacking libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-05-16T17:37:32.4975531Z Selecting previously unselected package libglvnd-dev:amd64. 2021-05-16T17:37:32.5232976Z Preparing to unpack .../09-libglvnd-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T17:37:32.5242704Z Unpacking libglvnd-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:37:32.5457473Z Selecting previously unselected package libgl1-mesa-dev:amd64. 2021-05-16T17:37:32.5766360Z Preparing to unpack .../10-libgl1-mesa-dev_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-16T17:37:32.5776886Z Unpacking libgl1-mesa-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T17:37:32.6016491Z Selecting previously unselected package pandoc-citeproc. 2021-05-16T17:37:32.6320254Z Preparing to unpack .../11-pandoc-citeproc_0.15.0.1-1build4_amd64.deb ... 2021-05-16T17:37:32.6329191Z Unpacking pandoc-citeproc (0.15.0.1-1build4) ... 2021-05-16T17:37:32.6357293Z Replaced by files in installed package pandoc (2.7.3-1) ... 2021-05-16T17:37:33.9434535Z Setting up libegl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:37:33.9466328Z Setting up libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-05-16T17:37:33.9510717Z Setting up libopengl0:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:37:33.9538086Z Setting up libbibutils6 (6.2-1) ... 2021-05-16T17:37:33.9559655Z Setting up libgles2:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:37:33.9582938Z Setting up libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-05-16T17:37:33.9605485Z Setting up libgles1:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:37:33.9645008Z Setting up libopengl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:37:33.9664663Z Setting up libgles-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:37:33.9684320Z Setting up pandoc-citeproc (0.15.0.1-1build4) ... 2021-05-16T17:37:33.9715014Z Setting up libglvnd-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T17:37:33.9733603Z Setting up libgl1-mesa-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T17:37:33.9753962Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T17:37:37.0223764Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T17:37:38.9050266Z ##[group]Run remotes::install_github("ropensci/tic") 2021-05-16T17:37:38.9050987Z remotes::install_github("ropensci/tic") 2021-05-16T17:37:38.9051603Z remotes::install_github("muschellij2/ghtravis") 2021-05-16T17:37:38.9052241Z remotes::install_github("muschellij2/aghast") 2021-05-16T17:37:38.9052803Z remotes::install_cran("covr") 2021-05-16T17:37:38.9060326Z shell: /usr/local/bin/Rscript {0} 2021-05-16T17:37:38.9060725Z env: 2021-05-16T17:37:38.9061182Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:37:38.9061633Z TIC_DEPLOY_KEY: 2021-05-16T17:37:38.9062396Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:37:38.9064118Z GITHUB_PAT: *** 2021-05-16T17:37:38.9064513Z COVERALLS_TOKEN: 2021-05-16T17:37:38.9064988Z continue-on-error: true 2021-05-16T17:37:38.9065435Z VDIFFR_RUN_TESTS: 2021-05-16T17:37:38.9065880Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:37:38.9066320Z TZ: UTC 2021-05-16T17:37:38.9066694Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:37:38.9067076Z NOT_CRAN: true 2021-05-16T17:37:38.9067429Z ##[endgroup] 2021-05-16T17:37:39.0937397Z Using github PAT from envvar GITHUB_PAT 2021-05-16T17:37:39.6540571Z Downloading GitHub repo ropensci/tic@HEAD 2021-05-16T17:37:55.4933329Z rlang (NA -> 0.4.11) [CRAN] 2021-05-16T17:37:55.4934871Z magrittr (NA -> 2.0.1 ) [CRAN] 2021-05-16T17:37:55.4935888Z glue (NA -> 1.4.2 ) [CRAN] 2021-05-16T17:37:55.4936768Z sys (NA -> 3.4 ) [CRAN] 2021-05-16T17:37:55.4937682Z askpass (NA -> 1.1 ) [CRAN] 2021-05-16T17:37:55.4938592Z openssl (NA -> 1.4.4 ) [CRAN] 2021-05-16T17:37:55.4940179Z mime (NA -> 0.10 ) [CRAN] 2021-05-16T17:37:55.4941075Z curl (NA -> 4.3.1 ) [CRAN] 2021-05-16T17:37:55.4941927Z jsonlite (NA -> 1.7.2 ) [CRAN] 2021-05-16T17:37:55.4942740Z ini (NA -> 0.3.1 ) [CRAN] 2021-05-16T17:37:55.4943525Z httr (NA -> 1.4.2 ) [CRAN] 2021-05-16T17:37:55.4944332Z gitcreds (NA -> 0.1.1 ) [CRAN] 2021-05-16T17:37:55.4945133Z cli (NA -> 2.5.0 ) [CRAN] 2021-05-16T17:37:55.4945896Z zip (NA -> 2.1.1 ) [CRAN] 2021-05-16T17:37:55.4946719Z rstudioapi (NA -> 0.13 ) [CRAN] 2021-05-16T17:37:55.4947580Z credentials (NA -> 1.3.0 ) [CRAN] 2021-05-16T17:37:55.4948412Z fastmap (NA -> 1.1.0 ) [CRAN] 2021-05-16T17:37:55.4949215Z yaml (NA -> 2.2.1 ) [CRAN] 2021-05-16T17:37:55.4949989Z withr (NA -> 2.4.2 ) [CRAN] 2021-05-16T17:37:55.4950798Z whisker (NA -> 0.4 ) [CRAN] 2021-05-16T17:37:55.4951630Z rappdirs (NA -> 0.3.3 ) [CRAN] 2021-05-16T17:37:55.4952432Z purrr (NA -> 0.3.4 ) [CRAN] 2021-05-16T17:37:55.4953256Z lifecycle (NA -> 1.0.0 ) [CRAN] 2021-05-16T17:37:55.4954064Z gh (NA -> 1.3.0 ) [CRAN] 2021-05-16T17:37:55.4954862Z gert (NA -> 1.3.0 ) [CRAN] 2021-05-16T17:37:55.4955944Z fs (NA -> 1.5.0 ) [CRAN] 2021-05-16T17:37:55.4956723Z clipr (NA -> 0.7.1 ) [CRAN] 2021-05-16T17:37:55.4957532Z cachem (NA -> 1.0.5 ) [CRAN] 2021-05-16T17:37:55.4958455Z usethis (NA -> 2.0.1 ) [CRAN] 2021-05-16T17:37:55.4959287Z memoise (NA -> 2.0.0 ) [CRAN] 2021-05-16T17:37:55.4960112Z git2r (NA -> 0.28.0) [CRAN] 2021-05-16T17:37:55.4962194Z Installing 31 packages: rlang, magrittr, glue, sys, askpass, openssl, mime, curl, jsonlite, ini, httr, gitcreds, cli, zip, rstudioapi, credentials, fastmap, yaml, withr, whisker, rappdirs, purrr, lifecycle, gh, gert, fs, clipr, cachem, usethis, memoise, git2r 2021-05-16T17:37:55.4972764Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T17:37:55.4973605Z (as ‘lib’ is unspecified) 2021-05-16T17:38:09.5552163Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rlang_0.4.11.tar.gz' 2021-05-16T17:38:10.6189019Z Content type 'binary/octet-stream' length 859995 bytes (839 KB) 2021-05-16T17:38:11.0078008Z ================================================== 2021-05-16T17:38:11.0080038Z downloaded 839 KB 2021-05-16T17:38:11.0081956Z 2021-05-16T17:38:11.0120599Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/magrittr_2.0.1.tar.gz' 2021-05-16T17:38:12.2170859Z Content type 'binary/octet-stream' length 264532 bytes (258 KB) 2021-05-16T17:38:12.5343796Z ================================================== 2021-05-16T17:38:12.5344340Z downloaded 258 KB 2021-05-16T17:38:12.5344633Z 2021-05-16T17:38:12.5382265Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/glue_1.4.2.tar.gz' 2021-05-16T17:38:13.5912128Z Content type 'binary/octet-stream' length 100043 bytes (97 KB) 2021-05-16T17:38:13.7149116Z ================================================== 2021-05-16T17:38:13.7149687Z downloaded 97 KB 2021-05-16T17:38:13.7150002Z 2021-05-16T17:38:13.7186174Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sys_3.4.tar.gz' 2021-05-16T17:38:15.7149322Z Content type 'binary/octet-stream' length 20291 bytes (19 KB) 2021-05-16T17:38:15.7833015Z ================================================== 2021-05-16T17:38:15.7834399Z downloaded 19 KB 2021-05-16T17:38:15.7835191Z 2021-05-16T17:38:15.7876080Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/askpass_1.1.tar.gz' 2021-05-16T17:38:16.7735375Z Content type 'application/x-tar' length 5688 bytes 2021-05-16T17:38:16.7740333Z ================================================== 2021-05-16T17:38:16.7741184Z downloaded 5688 bytes 2021-05-16T17:38:16.7742369Z 2021-05-16T17:38:16.7783953Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/openssl_1.4.4.tar.gz' 2021-05-16T17:38:17.8266263Z Content type 'binary/octet-stream' length 1311683 bytes (1.3 MB) 2021-05-16T17:38:18.2649958Z ================================================== 2021-05-16T17:38:18.2651098Z downloaded 1.3 MB 2021-05-16T17:38:18.2651645Z 2021-05-16T17:38:18.2688711Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/mime_0.10.tar.gz' 2021-05-16T17:38:19.3169586Z Content type 'binary/octet-stream' length 12958 bytes (12 KB) 2021-05-16T17:38:19.3235339Z ================================================== 2021-05-16T17:38:19.3235854Z downloaded 12 KB 2021-05-16T17:38:19.3236168Z 2021-05-16T17:38:19.3274878Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/curl_4.3.1.tar.gz' 2021-05-16T17:38:20.3704632Z Content type 'binary/octet-stream' length 798588 bytes (779 KB) 2021-05-16T17:38:20.7495314Z ================================================== 2021-05-16T17:38:20.7497201Z downloaded 779 KB 2021-05-16T17:38:20.7498498Z 2021-05-16T17:38:20.7534912Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/jsonlite_1.7.2.tar.gz' 2021-05-16T17:38:21.8570557Z Content type 'binary/octet-stream' length 422264 bytes (412 KB) 2021-05-16T17:38:22.1635144Z ================================================== 2021-05-16T17:38:22.1636402Z downloaded 412 KB 2021-05-16T17:38:22.1637212Z 2021-05-16T17:38:22.1679525Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ini_0.3.1.tar.gz' 2021-05-16T17:38:23.2160643Z Content type 'application/x-tar' length 3475 bytes 2021-05-16T17:38:23.2161379Z ================================================== 2021-05-16T17:38:23.2161874Z downloaded 3475 bytes 2021-05-16T17:38:23.2162193Z 2021-05-16T17:38:23.2203664Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/httr_1.4.2.tar.gz' 2021-05-16T17:38:24.6164612Z Content type 'binary/octet-stream' length 159877 bytes (156 KB) 2021-05-16T17:38:24.8693189Z ================================================== 2021-05-16T17:38:24.8694414Z downloaded 156 KB 2021-05-16T17:38:24.8695006Z 2021-05-16T17:38:24.8736256Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gitcreds_0.1.1.tar.gz' 2021-05-16T17:38:25.9648743Z Content type 'binary/octet-stream' length 62129 bytes (60 KB) 2021-05-16T17:38:26.0586481Z ================================================== 2021-05-16T17:38:26.0587442Z downloaded 60 KB 2021-05-16T17:38:26.0587890Z 2021-05-16T17:38:26.0623693Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cli_2.5.0.tar.gz' 2021-05-16T17:38:27.4739252Z Content type 'binary/octet-stream' length 158132 bytes (154 KB) 2021-05-16T17:38:27.6573328Z ================================================== 2021-05-16T17:38:27.6574563Z downloaded 154 KB 2021-05-16T17:38:27.6575120Z 2021-05-16T17:38:27.6614499Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/zip_2.1.1.tar.gz' 2021-05-16T17:38:28.8807465Z Content type 'binary/octet-stream' length 113091 bytes (110 KB) 2021-05-16T17:38:29.0359357Z ================================================== 2021-05-16T17:38:29.0359928Z downloaded 110 KB 2021-05-16T17:38:29.0360235Z 2021-05-16T17:38:29.0399895Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rstudioapi_0.13.tar.gz' 2021-05-16T17:38:30.1146010Z Content type 'binary/octet-stream' length 109870 bytes (107 KB) 2021-05-16T17:38:30.2737267Z ================================================== 2021-05-16T17:38:30.2738230Z downloaded 107 KB 2021-05-16T17:38:30.2738859Z 2021-05-16T17:38:30.2777560Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/credentials_1.3.0.tar.gz' 2021-05-16T17:38:31.3507404Z Content type 'binary/octet-stream' length 230676 bytes (225 KB) 2021-05-16T17:38:31.5715413Z ================================================== 2021-05-16T17:38:31.5716228Z downloaded 225 KB 2021-05-16T17:38:31.5716626Z 2021-05-16T17:38:31.5758180Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fastmap_1.1.0.tar.gz' 2021-05-16T17:38:32.6215190Z Content type 'binary/octet-stream' length 44517 bytes (43 KB) 2021-05-16T17:38:32.7017382Z ================================================== 2021-05-16T17:38:32.7017934Z downloaded 43 KB 2021-05-16T17:38:32.7018254Z 2021-05-16T17:38:32.7055370Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/yaml_2.2.1.tar.gz' 2021-05-16T17:38:33.9422933Z Content type 'binary/octet-stream' length 92979 bytes (90 KB) 2021-05-16T17:38:34.0322256Z ================================================== 2021-05-16T17:38:34.0322790Z downloaded 90 KB 2021-05-16T17:38:34.0323098Z 2021-05-16T17:38:34.0364062Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/withr_2.4.2.tar.gz' 2021-05-16T17:38:35.0894397Z Content type 'binary/octet-stream' length 95150 bytes (92 KB) 2021-05-16T17:38:35.2010265Z ================================================== 2021-05-16T17:38:35.2010797Z downloaded 92 KB 2021-05-16T17:38:35.2011102Z 2021-05-16T17:38:35.2118363Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/whisker_0.4.tar.gz' 2021-05-16T17:38:36.0952777Z Content type 'application/x-tar' length 28675 bytes (28 KB) 2021-05-16T17:38:36.1065629Z ================================================== 2021-05-16T17:38:36.1066130Z downloaded 28 KB 2021-05-16T17:38:36.1066435Z 2021-05-16T17:38:36.1103749Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rappdirs_0.3.3.tar.gz' 2021-05-16T17:38:37.1609594Z Content type 'binary/octet-stream' length 12326 bytes (12 KB) 2021-05-16T17:38:37.1655721Z ================================================== 2021-05-16T17:38:37.1659381Z downloaded 12 KB 2021-05-16T17:38:37.1659695Z 2021-05-16T17:38:37.1699311Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/purrr_0.3.4.tar.gz' 2021-05-16T17:38:38.1617744Z Content type 'binary/octet-stream' length 373001 bytes (364 KB) 2021-05-16T17:38:38.4516461Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gert_1.3.0.tar.gz' 2021-05-16T17:38:41.9913797Z Content type 'binary/octet-stream' length 66528 bytes (64 KB) 2021-05-16T17:38:42.0815022Z ================================================== 2021-05-16T17:38:42.0815571Z downloaded 64 KB 2021-05-16T17:38:42.0815913Z 2021-05-16T17:38:42.0852456Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fs_1.5.0.tar.gz' 2021-05-16T17:38:43.0771532Z Content type 'binary/octet-stream' length 800044 bytes (781 KB) 2021-05-16T17:38:43.4546455Z ================================================== 2021-05-16T17:38:43.4547380Z downloaded 781 KB 2021-05-16T17:38:43.4547896Z 2021-05-16T17:38:43.4586865Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/clipr_0.7.1.tar.gz' 2021-05-16T17:38:44.5721940Z Content type 'binary/octet-stream' length 20919 bytes (20 KB) 2021-05-16T17:38:44.6448536Z ================================================== 2021-05-16T17:38:44.6449061Z downloaded 20 KB 2021-05-16T17:38:44.6449373Z 2021-05-16T17:38:44.6485940Z trying URL 'https://cloud.r-project.org/src/contrib/cachem_1.0.5.tar.gz' 2021-05-16T17:38:45.4328287Z Content type 'application/x-gzip' length 24974 bytes (24 KB) 2021-05-16T17:38:45.4329034Z ================================================== 2021-05-16T17:38:45.4329482Z downloaded 24 KB 2021-05-16T17:38:45.4329783Z 2021-05-16T17:38:45.4355238Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/usethis_2.0.1.tar.gz' 2021-05-16T17:38:46.4937153Z Content type 'binary/octet-stream' length 304209 bytes (297 KB) 2021-05-16T17:38:46.7559318Z ================================================== 2021-05-16T17:38:46.7560499Z downloaded 297 KB 2021-05-16T17:38:46.7561060Z 2021-05-16T17:38:46.7599634Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/memoise_2.0.0.tar.gz' 2021-05-16T17:38:47.8260270Z Content type 'binary/octet-stream' length 17411 bytes (17 KB) 2021-05-16T17:38:47.8350135Z ================================================== 2021-05-16T17:38:47.8350617Z downloaded 17 KB 2021-05-16T17:38:47.8351038Z 2021-05-16T17:38:47.8392946Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/git2r_0.28.0.tar.gz' 2021-05-16T17:38:48.8940879Z Content type 'binary/octet-stream' length 1223574 bytes (1.2 MB) 2021-05-16T17:38:49.3150659Z ================================================== 2021-05-16T17:38:49.3152910Z downloaded 1.2 MB 2021-05-16T17:38:49.3154308Z 2021-05-16T17:38:49.7858298Z * installing *source* package ‘rlang’ ... 2021-05-16T17:38:49.7983365Z ** package ‘rlang’ successfully unpacked and MD5 sums checked 2021-05-16T17:38:49.7984587Z ** using staged installation 2021-05-16T17:38:49.8157169Z ** libs 2021-05-16T17:38:49.8221405Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c capture.c -o capture.o 2021-05-16T17:38:49.9223653Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c export.c -o export.o 2021-05-16T17:38:50.2223110Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c internal.c -o internal.o 2021-05-16T17:38:52.3149381Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c lib.c -o lib.o 2021-05-16T17:38:53.9195517Z installing to /home/runner/work/_temp/Library/00LOCK-rlang/00new/rlang/libs 2021-05-16T17:38:53.9197246Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-16T17:38:53.9208789Z ** R 2021-05-16T17:38:53.9210293Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o version.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:38:53.9211400Z ** inst 2021-05-16T17:38:53.9212381Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:38:56.3606402Z ** help 2021-05-16T17:38:56.9991089Z *** installing help indices 2021-05-16T17:38:57.2708765Z *** copying figures 2021-05-16T17:38:57.2714037Z ** building package indices 2021-05-16T17:38:57.7116566Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:38:57.8998246Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:38:57.9219555Z ** testing if installed package can be loaded from final location 2021-05-16T17:38:58.1688888Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:38:58.1723826Z * DONE (rlang) 2021-05-16T17:38:58.4160970Z * installing *source* package ‘magrittr’ ... 2021-05-16T17:38:58.4187898Z ** package ‘magrittr’ successfully unpacked and MD5 sums checked 2021-05-16T17:38:58.4188888Z ** using staged installation 2021-05-16T17:38:58.4309609Z ** libs 2021-05-16T17:38:58.4353775Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pipe.c -o pipe.o 2021-05-16T17:38:58.5531388Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T17:38:58.6039919Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o magrittr.so pipe.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:38:58.6255756Z installing to /home/runner/work/_temp/Library/00LOCK-magrittr/00new/magrittr/libs 2021-05-16T17:38:58.6266296Z ** R 2021-05-16T17:38:58.6304327Z ** inst 2021-05-16T17:38:58.6317905Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:38:58.8989171Z ** help 2021-05-16T17:38:58.9381066Z *** installing help indices 2021-05-16T17:38:58.9665174Z *** copying figures 2021-05-16T17:38:58.9668375Z ** building package indices 2021-05-16T17:38:59.1654925Z ** installing vignettes 2021-05-16T17:38:59.1681983Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:38:59.3343891Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:38:59.3518140Z ** testing if installed package can be loaded from final location 2021-05-16T17:38:59.5154264Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:38:59.5161466Z * DONE (magrittr) 2021-05-16T17:38:59.7462549Z * installing *source* package ‘glue’ ... 2021-05-16T17:38:59.7481239Z ** package ‘glue’ successfully unpacked and MD5 sums checked 2021-05-16T17:38:59.7482411Z ** using staged installation 2021-05-16T17:38:59.7623748Z ** libs 2021-05-16T17:38:59.7670786Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c glue.c -o glue.o 2021-05-16T17:38:59.8787191Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:38:59.9208846Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c trim.c -o trim.o 2021-05-16T17:38:59.9998458Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o glue.so glue.o init.o trim.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:39:00.0215758Z installing to /home/runner/work/_temp/Library/00LOCK-glue/00new/glue/libs 2021-05-16T17:39:00.0225317Z ** R 2021-05-16T17:39:00.0275101Z ** inst 2021-05-16T17:39:00.0285654Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:39:00.4693013Z ** help 2021-05-16T17:39:00.4978224Z *** installing help indices 2021-05-16T17:39:00.5262442Z *** copying figures 2021-05-16T17:39:00.5265191Z ** building package indices 2021-05-16T17:39:00.7123316Z ** installing vignettes 2021-05-16T17:39:00.7183090Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:39:00.9264931Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:39:00.9445681Z ** testing if installed package can be loaded from final location 2021-05-16T17:39:01.1530752Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:39:01.1539652Z * DONE (glue) 2021-05-16T17:39:01.3609817Z * installing *source* package ‘sys’ ... 2021-05-16T17:39:01.3621692Z ** package ‘sys’ successfully unpacked and MD5 sums checked 2021-05-16T17:39:01.3622754Z ** using staged installation 2021-05-16T17:39:01.3805841Z ** libs 2021-05-16T17:39:01.3851914Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c exec.c -o exec.o 2021-05-16T17:39:01.5629142Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:39:01.6056568Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o sys.so exec.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:39:01.6295277Z installing to /home/runner/work/_temp/Library/00LOCK-sys/00new/sys/libs 2021-05-16T17:39:01.6296295Z ** R 2021-05-16T17:39:01.6317465Z ** inst 2021-05-16T17:39:01.6325139Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:39:01.8927393Z ** help 2021-05-16T17:39:01.9117954Z *** installing help indices 2021-05-16T17:39:01.9304530Z ** building package indices 2021-05-16T17:39:02.1128003Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:39:02.2785256Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:39:02.2960228Z ** testing if installed package can be loaded from final location 2021-05-16T17:39:02.4590199Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:39:02.4606556Z * DONE (sys) 2021-05-16T17:39:02.6530061Z * installing *source* package ‘mime’ ... 2021-05-16T17:39:02.6538082Z ** package ‘mime’ successfully unpacked and MD5 sums checked 2021-05-16T17:39:02.6539121Z ** using staged installation 2021-05-16T17:39:02.6663182Z ** libs 2021-05-16T17:39:02.6711864Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:39:02.7139555Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rawmatch.c -o rawmatch.o 2021-05-16T17:39:02.7666495Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o mime.so init.o rawmatch.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:39:02.7808723Z installing to /home/runner/work/_temp/Library/00LOCK-mime/00new/mime/libs 2021-05-16T17:39:02.7822890Z ** R 2021-05-16T17:39:02.7875703Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:39:03.0887866Z ** help 2021-05-16T17:39:03.1088654Z *** installing help indices 2021-05-16T17:39:03.1236951Z ** building package indices 2021-05-16T17:39:03.3009913Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:39:03.4665353Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:39:03.4834391Z ** testing if installed package can be loaded from final location 2021-05-16T17:39:03.6517350Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:39:03.6523826Z * DONE (mime) 2021-05-16T17:39:03.9823238Z * installing *source* package ‘curl’ ... 2021-05-16T17:39:03.9898474Z ** package ‘curl’ successfully unpacked and MD5 sums checked 2021-05-16T17:39:03.9899559Z ** using staged installation 2021-05-16T17:39:03.9979450Z Found pkg-config cflags and libs! 2021-05-16T17:39:04.0797893Z Using PKG_CFLAGS=-I/usr/include/x86_64-linux-gnu 2021-05-16T17:39:04.0798945Z Using PKG_LIBS=-lcurl 2021-05-16T17:39:04.1263478Z ** libs 2021-05-16T17:39:04.1315873Z rm -f curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o 2021-05-16T17:39:04.1342123Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c callbacks.c -o callbacks.o 2021-05-16T17:39:04.2055043Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c curl.c -o curl.o 2021-05-16T17:39:04.3232019Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c download.c -o download.o 2021-05-16T17:39:04.4049362Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c escape.c -o escape.o 2021-05-16T17:39:04.4585134Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fetch.c -o fetch.o 2021-05-16T17:39:04.5546995Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c form.c -o form.o 2021-05-16T17:39:04.6221238Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c getdate.c -o getdate.o 2021-05-16T17:39:04.6743527Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c handle.c -o handle.o 2021-05-16T17:39:04.9868130Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ieproxy.c -o ieproxy.o 2021-05-16T17:39:05.0244574Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:39:05.0770796Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c interrupt.c -o interrupt.o 2021-05-16T17:39:05.1396241Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c multi.c -o multi.o 2021-05-16T17:39:05.3037124Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c nslookup.c -o nslookup.o 2021-05-16T17:39:05.3559285Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c reflist.c -o reflist.o 2021-05-16T17:39:05.4073308Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c split.c -o split.o 2021-05-16T17:39:05.4476672Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ssl.c -o ssl.o 2021-05-16T17:39:05.4908848Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typechecking.c -o typechecking.o 2021-05-16T17:39:05.5433674Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T17:39:05.6586561Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-16T17:39:05.7219313Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c winidn.c -o winidn.o 2021-05-16T17:39:05.7403187Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c writer.c -o writer.o 2021-05-16T17:39:05.7875821Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o -lcurl -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:39:05.8183362Z installing to /home/runner/work/_temp/Library/00LOCK-curl/00new/curl/libs 2021-05-16T17:39:05.8198701Z ** R 2021-05-16T17:39:05.8313148Z ** inst 2021-05-16T17:39:05.8346024Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:39:06.3099949Z ** help 2021-05-16T17:39:06.3548266Z *** installing help indices 2021-05-16T17:39:06.3868400Z ** building package indices 2021-05-16T17:39:06.5953281Z ** installing vignettes 2021-05-16T17:39:06.6071967Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:39:06.8030582Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:39:06.8243445Z ** testing if installed package can be loaded from final location 2021-05-16T17:39:07.0132955Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:39:07.0142933Z * DONE (curl) 2021-05-16T17:39:07.3242615Z * installing *source* package ‘jsonlite’ ... 2021-05-16T17:39:07.3294741Z ** package ‘jsonlite’ successfully unpacked and MD5 sums checked 2021-05-16T17:39:07.3295819Z ** using staged installation 2021-05-16T17:39:07.3424740Z ** libs 2021-05-16T17:39:07.3480772Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T17:39:07.4138143Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_array.c -o collapse_array.o 2021-05-16T17:39:07.4683463Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_object.c -o collapse_object.o 2021-05-16T17:39:07.5280758Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_pretty.c -o collapse_pretty.o 2021-05-16T17:39:07.6320306Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c escape_chars.c -o escape_chars.o 2021-05-16T17:39:07.6966660Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c integer64_to_na.c -o integer64_to_na.o 2021-05-16T17:39:07.7418968Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_datelist.c -o is_datelist.o 2021-05-16T17:39:07.7869178Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_recordlist.c -o is_recordlist.o 2021-05-16T17:39:07.8375005Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_scalarlist.c -o is_scalarlist.o 2021-05-16T17:39:07.8840017Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c modp_numtoa.c -o modp_numtoa.o 2021-05-16T17:39:08.0066056Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c null_to_na.c -o null_to_na.o 2021-05-16T17:39:08.0705378Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c num_to_char.c -o num_to_char.o 2021-05-16T17:39:08.1505986Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c parse.c -o parse.o 2021-05-16T17:39:08.2187684Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c prettify.c -o prettify.o 2021-05-16T17:39:08.2823457Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c push_parser.c -o push_parser.o 2021-05-16T17:39:08.3353703Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c r-base64.c -o r-base64.o 2021-05-16T17:39:08.3865656Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c register.c -o register.o 2021-05-16T17:39:08.4287321Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c row_collapse.c -o row_collapse.o 2021-05-16T17:39:08.4901701Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c transpose_list.c -o transpose_list.o 2021-05-16T17:39:08.5383334Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c validate.c -o validate.o 2021-05-16T17:39:08.5844253Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl.c -o yajl/yajl.o 2021-05-16T17:39:08.6417712Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o 2021-05-16T17:39:08.6705674Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_buf.c -o yajl/yajl_buf.o 2021-05-16T17:39:08.7138605Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_encode.c -o yajl/yajl_encode.o 2021-05-16T17:39:08.8056363Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_gen.c -o yajl/yajl_gen.o 2021-05-16T17:39:09.0294113Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_lex.c -o yajl/yajl_lex.o 2021-05-16T17:39:09.2762291Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_parser.c -o yajl/yajl_parser.o 2021-05-16T17:39:09.4365871Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_tree.c -o yajl/yajl_tree.o 2021-05-16T17:39:09.5676343Z ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o 2021-05-16T17:39:09.5753037Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:39:09.6055779Z installing to /home/runner/work/_temp/Library/00LOCK-jsonlite/00new/jsonlite/libs 2021-05-16T17:39:09.6063207Z ** R 2021-05-16T17:39:09.6220804Z ** inst 2021-05-16T17:39:09.6237667Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:39:10.5674170Z ** help 2021-05-16T17:39:10.5675506Z in method for ‘asJSON’ with signature ‘"blob"’: no definition for class “blob” 2021-05-16T17:39:10.5971654Z *** installing help indices 2021-05-16T17:39:10.6219877Z ** building package indices 2021-05-16T17:39:10.8094973Z ** installing vignettes 2021-05-16T17:39:10.8153777Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:39:10.9978026Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:39:11.0191862Z ** testing if installed package can be loaded from final location 2021-05-16T17:39:11.2136972Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:39:11.2151875Z * DONE (jsonlite) 2021-05-16T17:39:11.4078141Z * installing *source* package ‘ini’ ... 2021-05-16T17:39:11.4088958Z ** package ‘ini’ successfully unpacked and MD5 sums checked 2021-05-16T17:39:11.4092759Z ** using staged installation 2021-05-16T17:39:11.4196298Z ** R 2021-05-16T17:39:11.4221637Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:39:11.6487989Z ** help 2021-05-16T17:39:11.6607509Z *** installing help indices 2021-05-16T17:39:11.6826867Z ** building package indices 2021-05-16T17:39:11.8597931Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:39:12.0232532Z ** testing if installed package can be loaded from final location 2021-05-16T17:39:12.1858212Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:39:12.1863692Z * DONE (ini) 2021-05-16T17:39:12.4082652Z * installing *source* package ‘gitcreds’ ... 2021-05-16T17:39:12.4101550Z ** package ‘gitcreds’ successfully unpacked and MD5 sums checked 2021-05-16T17:39:12.4102727Z ** using staged installation 2021-05-16T17:39:12.4206319Z ** R 2021-05-16T17:39:12.4262908Z ** inst 2021-05-16T17:39:12.4273615Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:39:12.8768261Z ** help 2021-05-16T17:39:12.9013232Z *** installing help indices 2021-05-16T17:39:12.9230165Z ** building package indices 2021-05-16T17:39:13.1056989Z ** installing vignettes 2021-05-16T17:39:13.1112328Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:39:13.2749694Z ** testing if installed package can be loaded from final location 2021-05-16T17:39:13.4420085Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:39:13.4428297Z * DONE (gitcreds) 2021-05-16T17:39:13.6747342Z * installing *source* package ‘zip’ ... 2021-05-16T17:39:13.6772844Z ** package ‘zip’ successfully unpacked and MD5 sums checked 2021-05-16T17:39:13.6774125Z ** using staged installation 2021-05-16T17:39:13.6871679Z ** libs 2021-05-16T17:39:13.6922808Z gcc -g -O2 miniz.c zip.c unixutils.c tools/cmdzip.c -o tools/cmdzip 2021-05-16T17:39:16.2627880Z gcc -g -O2 miniz.c zip.c unixutils.c tools/cmdunzip.c -o tools/cmdunzip 2021-05-16T17:39:18.8036955Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:39:18.8452474Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c miniz.c -o miniz.o 2021-05-16T17:39:21.1571232Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rzip.c -o rzip.o 2021-05-16T17:39:21.2451253Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c zip.c -o zip.o 2021-05-16T17:39:21.3690397Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unixutils.c -o unixutils.o 2021-05-16T17:39:21.4276074Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o zip.so init.o miniz.o rzip.o zip.o unixutils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:39:21.4535695Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-zip/00new/zip 2021-05-16T17:39:21.4580192Z ** R 2021-05-16T17:39:21.4617727Z ** inst 2021-05-16T17:39:21.4627920Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:39:21.7669490Z ** help 2021-05-16T17:39:21.7870592Z *** installing help indices 2021-05-16T17:39:21.8098109Z ** building package indices 2021-05-16T17:39:21.9933062Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:39:22.1642961Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:39:22.1821332Z ** testing if installed package can be loaded from final location 2021-05-16T17:39:22.3492918Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:39:22.3500558Z * DONE (zip) 2021-05-16T17:39:22.6283238Z * installing *source* package ‘rstudioapi’ ... 2021-05-16T17:39:22.6321034Z ** package ‘rstudioapi’ successfully unpacked and MD5 sums checked 2021-05-16T17:39:22.6322129Z ** using staged installation 2021-05-16T17:39:22.6440623Z ** R 2021-05-16T17:39:22.6537154Z ** inst 2021-05-16T17:39:22.6553974Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:39:23.1382590Z ** help 2021-05-16T17:39:23.2978113Z *** installing help indices 2021-05-16T17:39:23.4077362Z *** copying figures 2021-05-16T17:39:23.4079928Z ** building package indices 2021-05-16T17:39:23.6824154Z ** installing vignettes 2021-05-16T17:39:23.6896906Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:39:23.8559777Z ** testing if installed package can be loaded from final location 2021-05-16T17:39:24.0247844Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:39:24.0257679Z * DONE (rstudioapi) 2021-05-16T17:39:24.2368026Z * installing *source* package ‘fastmap’ ... 2021-05-16T17:39:24.2382726Z ** package ‘fastmap’ successfully unpacked and MD5 sums checked 2021-05-16T17:39:24.2383716Z ** using staged installation 2021-05-16T17:39:24.2539494Z ** libs 2021-05-16T17:39:24.2591059Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilib/ -I/usr/local/include -DR_NO_REMAP -fpic -g -O2 -c fastmap.cpp -o fastmap.o 2021-05-16T17:39:26.0818168Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilib/ -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:39:26.1263041Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fastmap.so fastmap.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:39:26.1872254Z installing to /home/runner/work/_temp/Library/00LOCK-fastmap/00new/fastmap/libs 2021-05-16T17:39:26.1894654Z ** R 2021-05-16T17:39:26.1943842Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:39:26.5885789Z ** help 2021-05-16T17:39:26.6059525Z *** installing help indices 2021-05-16T17:39:26.6235897Z ** building package indices 2021-05-16T17:39:26.8056268Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:39:26.9735460Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:39:26.9915832Z ** testing if installed package can be loaded from final location 2021-05-16T17:39:27.1585676Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:39:27.1593322Z * DONE (fastmap) 2021-05-16T17:39:27.3904359Z * installing *source* package ‘yaml’ ... 2021-05-16T17:39:27.3928049Z ** package ‘yaml’ successfully unpacked and MD5 sums checked 2021-05-16T17:39:27.3929463Z ** using staged installation 2021-05-16T17:39:27.4016567Z ** libs 2021-05-16T17:39:27.4063680Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api.c -o api.o 2021-05-16T17:39:27.7193676Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dumper.c -o dumper.o 2021-05-16T17:39:27.8237322Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c emitter.c -o emitter.o 2021-05-16T17:39:28.6937251Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c implicit.c -o implicit.o 2021-05-16T17:39:28.8469342Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c loader.c -o loader.o 2021-05-16T17:39:28.9682787Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c parser.c -o parser.o 2021-05-16T17:39:29.3035359Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_emit.c -o r_emit.o 2021-05-16T17:39:29.5754144Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_ext.c -o r_ext.o 2021-05-16T17:39:29.6739900Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_parse.c -o r_parse.o 2021-05-16T17:39:30.0621404Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reader.c -o reader.o 2021-05-16T17:39:30.1645084Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c scanner.c -o scanner.o 2021-05-16T17:39:31.3962699Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c writer.c -o writer.o 2021-05-16T17:39:31.4535189Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o yaml.so api.o dumper.o emitter.o implicit.o loader.o parser.o r_emit.o r_ext.o r_parse.o reader.o scanner.o writer.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:39:31.4819197Z installing to /home/runner/work/_temp/Library/00LOCK-yaml/00new/yaml/libs 2021-05-16T17:39:31.4838410Z ** R 2021-05-16T17:39:31.4865638Z ** inst 2021-05-16T17:39:31.4878340Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:39:31.7199185Z ** help 2021-05-16T17:39:31.7391970Z *** installing help indices 2021-05-16T17:39:31.7622117Z ** building package indices 2021-05-16T17:39:31.9456161Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:39:32.1141850Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:39:32.1324056Z ** testing if installed package can be loaded from final location 2021-05-16T17:39:32.2950159Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:39:32.2956937Z * DONE (yaml) 2021-05-16T17:39:32.5415428Z * installing *source* package ‘withr’ ... 2021-05-16T17:39:32.5439993Z ** package ‘withr’ successfully unpacked and MD5 sums checked 2021-05-16T17:39:32.5441152Z ** using staged installation 2021-05-16T17:39:32.5585850Z ** R 2021-05-16T17:39:32.5666008Z ** inst 2021-05-16T17:39:32.5674528Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:39:33.1444653Z ** help 2021-05-16T17:39:33.2184697Z *** installing help indices 2021-05-16T17:39:33.2703739Z *** copying figures 2021-05-16T17:39:33.2706387Z ** building package indices 2021-05-16T17:39:33.4872432Z ** installing vignettes 2021-05-16T17:39:33.4936699Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:39:33.6589773Z ** testing if installed package can be loaded from final location 2021-05-16T17:39:33.8296178Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:39:33.8304973Z * DONE (withr) 2021-05-16T17:39:34.0493180Z * installing *source* package ‘whisker’ ... 2021-05-16T17:39:34.0509340Z ** package ‘whisker’ successfully unpacked and MD5 sums checked 2021-05-16T17:39:34.0510812Z ** using staged installation 2021-05-16T17:39:34.0597894Z ** R 2021-05-16T17:39:34.0637977Z ** inst 2021-05-16T17:39:34.0655385Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:39:34.4354012Z ** help 2021-05-16T17:39:34.4556342Z *** installing help indices 2021-05-16T17:39:34.4775889Z ** building package indices 2021-05-16T17:39:34.6644531Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:39:34.8301916Z ** testing if installed package can be loaded from final location 2021-05-16T17:39:34.9964354Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:39:34.9983731Z * DONE (whisker) 2021-05-16T17:39:35.2017172Z * installing *source* package ‘rappdirs’ ... 2021-05-16T17:39:35.2028106Z ** package ‘rappdirs’ successfully unpacked and MD5 sums checked 2021-05-16T17:39:35.2029185Z ** using staged installation 2021-05-16T17:39:35.2233146Z ** libs 2021-05-16T17:39:35.2279610Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:39:35.2715024Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c win-path.c -o win-path.o 2021-05-16T17:39:35.3140255Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rappdirs.so init.o win-path.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:39:35.3279941Z installing to /home/runner/work/_temp/Library/00LOCK-rappdirs/00new/rappdirs/libs 2021-05-16T17:39:35.3291999Z ** R 2021-05-16T17:39:35.3331591Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:39:35.6126287Z ** help 2021-05-16T17:39:35.6354960Z *** installing help indices 2021-05-16T17:39:35.6557093Z ** building package indices 2021-05-16T17:39:35.8416936Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:39:36.0082986Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:39:36.0254793Z ** testing if installed package can be loaded from final location 2021-05-16T17:39:36.1887121Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:39:36.1893085Z * DONE (rappdirs) 2021-05-16T17:39:36.6312597Z * installing *source* package ‘fs’ ... 2021-05-16T17:39:36.6440428Z ** package ‘fs’ successfully unpacked and MD5 sums checked 2021-05-16T17:39:36.6441523Z ** using staged installation 2021-05-16T17:39:36.6589872Z ** libs 2021-05-16T17:39:36.6649820Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c id.cc -o id.o 2021-05-16T17:39:37.1696084Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c file.cc -o file.o 2021-05-16T17:39:37.5630993Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c path.cc -o path.o 2021-05-16T17:39:37.9273173Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c fs.cc -o fs.o 2021-05-16T17:39:38.0031983Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c link.cc -o link.o 2021-05-16T17:39:38.2836867Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c utils.cc -o utils.o 2021-05-16T17:39:38.5673023Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c init.cc -o init.o 2021-05-16T17:39:38.6514952Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c dir.cc -o dir.o 2021-05-16T17:39:39.0561526Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c getmode.cc -o getmode.o 2021-05-16T17:39:39.3218814Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c error.cc -o error.o 2021-05-16T17:39:39.4154268Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c unix/getmode.cc -o unix/getmode.o 2021-05-16T17:39:39.7036662Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/setmode.c -o bsd/setmode.o 2021-05-16T17:39:39.8220261Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/strmode.c -o bsd/strmode.o 2021-05-16T17:39:39.8615691Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/reallocarray.c -o bsd/reallocarray.o 2021-05-16T17:39:39.8898716Z (cd libuv-1.38.1 \ 2021-05-16T17:39:39.8900404Z && CC="gcc" CFLAGS="-g -O2 -I/usr/local/include -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" LDFLAGS="-L/usr/local/lib" ./configure --quiet) 2021-05-16T17:39:43.8701715Z make --directory=libuv-1.38.1 \ 2021-05-16T17:39:43.8702726Z HAVE_DTRACE=0 2021-05-16T17:39:43.8799757Z make[1]: Entering directory '/tmp/RtmptoPnKd/R.INSTALL797479a9fb45/fs/src/libuv-1.38.1' 2021-05-16T17:39:43.8886216Z CC src/libuv_la-fs-poll.lo 2021-05-16T17:39:44.4738242Z CC src/libuv_la-idna.lo 2021-05-16T17:39:45.0685620Z CC src/libuv_la-inet.lo 2021-05-16T17:39:45.6869184Z CC src/libuv_la-random.lo 2021-05-16T17:39:46.1888154Z CC src/libuv_la-strscpy.lo 2021-05-16T17:39:46.6475458Z CC src/libuv_la-threadpool.lo 2021-05-16T17:39:47.2664528Z CC src/libuv_la-timer.lo 2021-05-16T17:39:47.8538020Z CC src/libuv_la-uv-data-getter-setters.lo 2021-05-16T17:39:48.3532180Z CC src/libuv_la-uv-common.lo 2021-05-16T17:39:49.3794675Z CC src/libuv_la-version.lo 2021-05-16T17:39:49.8384660Z CC src/unix/libuv_la-async.lo 2021-05-16T17:39:50.4127784Z CC src/unix/libuv_la-core.lo 2021-05-16T17:39:51.4965826Z CC src/unix/libuv_la-dl.lo 2021-05-16T17:39:51.9905936Z CC src/unix/libuv_la-fs.lo 2021-05-16T17:39:53.4172464Z CC src/unix/libuv_la-getaddrinfo.lo 2021-05-16T17:39:54.4357443Z CC src/unix/libuv_la-getnameinfo.lo 2021-05-16T17:39:54.4863824Z CC src/unix/libuv_la-loop-watcher.lo 2021-05-16T17:39:55.0636968Z CC src/unix/libuv_la-loop.lo 2021-05-16T17:39:55.6155340Z CC src/unix/libuv_la-pipe.lo 2021-05-16T17:39:56.2227085Z CC src/unix/libuv_la-poll.lo 2021-05-16T17:39:56.7649276Z CC src/unix/libuv_la-process.lo 2021-05-16T17:39:57.4965793Z CC src/unix/libuv_la-random-devurandom.lo 2021-05-16T17:39:58.0057737Z CC src/unix/libuv_la-signal.lo 2021-05-16T17:39:58.8614739Z CC src/unix/libuv_la-stream.lo 2021-05-16T17:39:59.8714678Z CC src/unix/libuv_la-tcp.lo 2021-05-16T17:40:00.5072822Z CC src/unix/libuv_la-thread.lo 2021-05-16T17:40:01.1983450Z CC src/unix/libuv_la-tty.lo 2021-05-16T17:40:01.7786531Z CC src/unix/libuv_la-udp.lo 2021-05-16T17:40:02.7618448Z CC src/unix/libuv_la-linux-core.lo 2021-05-16T17:40:03.7230653Z CC src/unix/libuv_la-linux-inotify.lo 2021-05-16T17:40:04.5107078Z CC src/unix/libuv_la-linux-syscalls.lo 2021-05-16T17:40:04.9569104Z CC src/unix/libuv_la-procfs-exepath.lo 2021-05-16T17:40:05.4491182Z CC src/unix/libuv_la-proctitle.lo 2021-05-16T17:40:05.9731361Z CC src/unix/libuv_la-random-getrandom.lo 2021-05-16T17:40:06.4591085Z CC src/unix/libuv_la-random-sysctl-linux.lo 2021-05-16T17:40:06.9620444Z CCLD libuv.la 2021-05-16T17:40:07.1584932Z ar: `u' modifier ignored since `D' is the default (see `U') 2021-05-16T17:40:07.1885497Z make[1]: Leaving directory '/tmp/RtmptoPnKd/R.INSTALL797479a9fb45/fs/src/libuv-1.38.1' 2021-05-16T17:40:07.1903460Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fs.so id.o file.o path.o fs.o link.o utils.o init.o dir.o getmode.o error.o unix/getmode.o bsd/setmode.o bsd/strmode.o bsd/reallocarray.o ./libuv-1.38.1/.libs/libuv.a -pthread -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:40:07.2736062Z installing to /home/runner/work/_temp/Library/00LOCK-fs/00new/fs/libs 2021-05-16T17:40:07.2758571Z ** R 2021-05-16T17:40:07.2855356Z ** inst 2021-05-16T17:40:07.2865568Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:40:08.2230927Z ** help 2021-05-16T17:40:08.2901145Z *** installing help indices 2021-05-16T17:40:08.3374172Z ** building package indices 2021-05-16T17:40:08.5528280Z ** installing vignettes 2021-05-16T17:40:08.5631183Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:40:08.7786829Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:40:08.7964747Z ** testing if installed package can be loaded from final location 2021-05-16T17:40:09.0174492Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:40:09.0186381Z * DONE (fs) 2021-05-16T17:40:09.2371739Z * installing *source* package ‘clipr’ ... 2021-05-16T17:40:09.2383779Z ** package ‘clipr’ successfully unpacked and MD5 sums checked 2021-05-16T17:40:09.2384809Z ** using staged installation 2021-05-16T17:40:09.2573451Z ** R 2021-05-16T17:40:09.2611424Z ** inst 2021-05-16T17:40:09.2620362Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:40:09.5627738Z ** help 2021-05-16T17:40:09.5834641Z *** installing help indices 2021-05-16T17:40:09.6036772Z ** building package indices 2021-05-16T17:40:09.7861272Z ** installing vignettes 2021-05-16T17:40:09.7915306Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:40:09.9577391Z ** testing if installed package can be loaded from final location 2021-05-16T17:40:10.1228360Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:40:10.1235327Z * DONE (clipr) 2021-05-16T17:40:10.8151073Z * installing *source* package ‘git2r’ ... 2021-05-16T17:40:10.8381075Z ** package ‘git2r’ successfully unpacked and MD5 sums checked 2021-05-16T17:40:10.8382307Z ** using staged installation 2021-05-16T17:40:11.0078885Z checking build system type... x86_64-unknown-linux-gnu 2021-05-16T17:40:11.0080372Z checking host system type... x86_64-unknown-linux-gnu 2021-05-16T17:40:11.0087168Z checking for gcc... gcc 2021-05-16T17:40:11.0655033Z checking whether the C compiler works... yes 2021-05-16T17:40:11.0655957Z checking for C compiler default output file name... a.out 2021-05-16T17:40:11.0993410Z checking for suffix of executables... 2021-05-16T17:40:11.1381798Z checking whether we are cross compiling... no 2021-05-16T17:40:11.1590315Z checking for suffix of object files... o 2021-05-16T17:40:11.1777556Z checking whether we are using the GNU C compiler... yes 2021-05-16T17:40:11.1964565Z checking whether gcc accepts -g... yes 2021-05-16T17:40:11.2293229Z checking for gcc option to accept ISO C89... none needed 2021-05-16T17:40:11.2301432Z checking for pkg-config... /usr/bin/pkg-config 2021-05-16T17:40:11.2314981Z checking pkg-config is at least version 0.9.0... yes 2021-05-16T17:40:11.2384975Z Found pkg-config cflags and libs! 2021-05-16T17:40:11.3255914Z checking whether the libgit2 version will work in git2r... yes 2021-05-16T17:40:11.4411268Z checking whether the libgit2 function git_buf_dispose is available... yes 2021-05-16T17:40:11.5569983Z checking whether the libgit2 constant GIT_OBJECT_ANY is available... yes 2021-05-16T17:40:11.6724727Z checking whether the libgit2 function git_error_last is available... yes 2021-05-16T17:40:11.7708686Z checking whether the libgit2 function git_oid_is_zero is available... no 2021-05-16T17:40:11.7710114Z ----- Results of the git2r package configure ----- 2021-05-16T17:40:11.7710497Z 2021-05-16T17:40:11.7711356Z PKG_CFLAGS: -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR 2021-05-16T17:40:11.7712264Z PKG_LIBS: -lgit2 2021-05-16T17:40:11.7712523Z 2021-05-16T17:40:11.7713139Z -------------------------------------------------- 2021-05-16T17:40:11.7895172Z configure: creating ./config.status 2021-05-16T17:40:11.8607144Z config.status: creating src/Makevars 2021-05-16T17:40:11.9130007Z ** libs 2021-05-16T17:40:11.9187506Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r.c -o git2r.o 2021-05-16T17:40:11.9813230Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_S3.c -o git2r_S3.o 2021-05-16T17:40:12.0283176Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_arg.c -o git2r_arg.o 2021-05-16T17:40:12.1731517Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_blame.c -o git2r_blame.o 2021-05-16T17:40:12.2584490Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_blob.c -o git2r_blob.o 2021-05-16T17:40:12.3716972Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_branch.c -o git2r_branch.o 2021-05-16T17:40:12.5836485Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_checkout.c -o git2r_checkout.o 2021-05-16T17:40:12.6680163Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_clone.c -o git2r_clone.o 2021-05-16T17:40:12.7510450Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_commit.c -o git2r_commit.o 2021-05-16T17:40:12.8898482Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_config.c -o git2r_config.o 2021-05-16T17:40:13.0378701Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_cred.c -o git2r_cred.o 2021-05-16T17:40:13.1223317Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_diff.c -o git2r_diff.o 2021-05-16T17:40:13.3542692Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_error.c -o git2r_error.o 2021-05-16T17:40:13.4144638Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_graph.c -o git2r_graph.o 2021-05-16T17:40:13.4930934Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_index.c -o git2r_index.o 2021-05-16T17:40:13.5724746Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_libgit2.c -o git2r_libgit2.o 2021-05-16T17:40:13.6457174Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_merge.c -o git2r_merge.o 2021-05-16T17:40:13.8074927Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_note.c -o git2r_note.o 2021-05-16T17:40:13.9292441Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_object.c -o git2r_object.o 2021-05-16T17:40:14.0064419Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_odb.c -o git2r_odb.o 2021-05-16T17:40:14.1569524Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_oid.c -o git2r_oid.o 2021-05-16T17:40:14.2170699Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_push.c -o git2r_push.o 2021-05-16T17:40:14.2934590Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reference.c -o git2r_reference.o 2021-05-16T17:40:14.3805535Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reflog.c -o git2r_reflog.o 2021-05-16T17:40:14.4589805Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_remote.c -o git2r_remote.o 2021-05-16T17:40:14.6209878Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_repository.c -o git2r_repository.o 2021-05-16T17:40:14.7662140Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reset.c -o git2r_reset.o 2021-05-16T17:40:14.8423398Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_revparse.c -o git2r_revparse.o 2021-05-16T17:40:14.9148334Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_revwalk.c -o git2r_revwalk.o 2021-05-16T17:40:15.0812795Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_signature.c -o git2r_signature.o 2021-05-16T17:40:15.1558708Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_stash.c -o git2r_stash.o 2021-05-16T17:40:15.2636452Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_status.c -o git2r_status.o 2021-05-16T17:40:15.4125402Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_tag.c -o git2r_tag.o 2021-05-16T17:40:15.5316256Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_transfer.c -o git2r_transfer.o 2021-05-16T17:40:15.5917918Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_tree.c -o git2r_tree.o 2021-05-16T17:40:15.6978169Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o git2r.so git2r.o git2r_S3.o git2r_arg.o git2r_blame.o git2r_blob.o git2r_branch.o git2r_checkout.o git2r_clone.o git2r_commit.o git2r_config.o git2r_cred.o git2r_diff.o git2r_error.o git2r_graph.o git2r_index.o git2r_libgit2.o git2r_merge.o git2r_note.o git2r_object.o git2r_odb.o git2r_oid.o git2r_push.o git2r_reference.o git2r_reflog.o git2r_remote.o git2r_repository.o git2r_reset.o git2r_revparse.o git2r_revwalk.o git2r_signature.o git2r_stash.o git2r_status.o git2r_tag.o git2r_transfer.o git2r_tree.o -lgit2 -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:40:15.7356640Z installing to /home/runner/work/_temp/Library/00LOCK-git2r/00new/git2r/libs 2021-05-16T17:40:15.7376691Z ** R 2021-05-16T17:40:15.7564171Z ** inst 2021-05-16T17:40:15.7573142Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:40:16.6331585Z ** help 2021-05-16T17:40:16.8584278Z *** installing help indices 2021-05-16T17:40:17.0317041Z ** building package indices 2021-05-16T17:40:17.3479006Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:40:17.5277056Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:40:17.5455827Z ** testing if installed package can be loaded from final location 2021-05-16T17:40:17.7332424Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:40:17.7343677Z * DONE (git2r) 2021-05-16T17:40:17.9406341Z * installing *source* package ‘askpass’ ... 2021-05-16T17:40:17.9415894Z ** package ‘askpass’ successfully unpacked and MD5 sums checked 2021-05-16T17:40:17.9416944Z ** using staged installation 2021-05-16T17:40:17.9547664Z ** libs 2021-05-16T17:40:17.9595975Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c askpass.c -o askpass.o 2021-05-16T17:40:18.0083100Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o askpass.so askpass.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:40:18.0288015Z installing to /home/runner/work/_temp/Library/00LOCK-askpass/00new/askpass/libs 2021-05-16T17:40:18.0302356Z ** R 2021-05-16T17:40:18.0330318Z ** inst 2021-05-16T17:40:18.0338609Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:40:18.2725901Z ** help 2021-05-16T17:40:18.2899141Z *** installing help indices 2021-05-16T17:40:18.3036681Z ** building package indices 2021-05-16T17:40:18.4800314Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:40:18.6497178Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:40:18.6672416Z ** testing if installed package can be loaded from final location 2021-05-16T17:40:18.8306999Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:40:18.8314725Z * DONE (askpass) 2021-05-16T17:40:19.1526983Z * installing *source* package ‘cli’ ... 2021-05-16T17:40:19.1584277Z ** package ‘cli’ successfully unpacked and MD5 sums checked 2021-05-16T17:40:19.1585405Z ** using staged installation 2021-05-16T17:40:19.1764866Z ** R 2021-05-16T17:40:19.2020541Z ** inst 2021-05-16T17:40:19.2032534Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:40:21.4967328Z ** help 2021-05-16T17:40:21.6782904Z *** installing help indices 2021-05-16T17:40:21.7927859Z *** copying figures 2021-05-16T17:40:21.7929177Z ** building package indices 2021-05-16T17:40:22.0793460Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:40:22.2859862Z ** testing if installed package can be loaded from final location 2021-05-16T17:40:22.5405172Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:40:22.5434606Z * DONE (cli) 2021-05-16T17:40:22.8462841Z * installing *source* package ‘purrr’ ... 2021-05-16T17:40:22.8512964Z ** package ‘purrr’ successfully unpacked and MD5 sums checked 2021-05-16T17:40:22.8514125Z ** using staged installation 2021-05-16T17:40:22.8656167Z ** libs 2021-05-16T17:40:22.8704790Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c backports.c -o backports.o 2021-05-16T17:40:22.9068143Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-05-16T17:40:22.9935843Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c conditions.c -o conditions.o 2021-05-16T17:40:23.0774204Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c flatten.c -o flatten.o 2021-05-16T17:40:23.1814882Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:40:23.2236613Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c map.c -o map.o 2021-05-16T17:40:23.3386455Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pluck.c -o pluck.o 2021-05-16T17:40:23.4644795Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c transpose.c -o transpose.o 2021-05-16T17:40:23.5473258Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T17:40:23.5987220Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o purrr.so backports.o coerce.o conditions.o flatten.o init.o map.o pluck.o transpose.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:40:23.6255958Z installing to /home/runner/work/_temp/Library/00LOCK-purrr/00new/purrr/libs 2021-05-16T17:40:23.6257183Z ** R 2021-05-16T17:40:23.6410151Z ** inst 2021-05-16T17:40:23.6419509Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:40:24.7744440Z ** help 2021-05-16T17:40:24.9342747Z *** installing help indices 2021-05-16T17:40:25.0261072Z *** copying figures 2021-05-16T17:40:25.0267499Z ** building package indices 2021-05-16T17:40:25.2841749Z ** installing vignettes 2021-05-16T17:40:25.2920512Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:40:25.4809237Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:40:25.4982999Z ** testing if installed package can be loaded from final location 2021-05-16T17:40:25.7037104Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:40:25.7052076Z * DONE (purrr) 2021-05-16T17:40:25.9528890Z * installing *source* package ‘lifecycle’ ... 2021-05-16T17:40:25.9554682Z ** package ‘lifecycle’ successfully unpacked and MD5 sums checked 2021-05-16T17:40:25.9555863Z ** using staged installation 2021-05-16T17:40:25.9690646Z ** R 2021-05-16T17:40:25.9735066Z ** inst 2021-05-16T17:40:25.9746110Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:40:26.3544581Z ** help 2021-05-16T17:40:26.3851247Z *** installing help indices 2021-05-16T17:40:26.4083472Z *** copying figures 2021-05-16T17:40:26.4088236Z ** building package indices 2021-05-16T17:40:26.5943017Z ** installing vignettes 2021-05-16T17:40:26.5999171Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:40:26.7822515Z ** testing if installed package can be loaded from final location 2021-05-16T17:40:26.9672833Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:40:26.9699474Z * DONE (lifecycle) 2021-05-16T17:40:27.1723560Z * installing *source* package ‘cachem’ ... 2021-05-16T17:40:27.1734755Z ** package ‘cachem’ successfully unpacked and MD5 sums checked 2021-05-16T17:40:27.1735824Z ** using staged installation 2021-05-16T17:40:27.1861711Z ** libs 2021-05-16T17:40:27.1911445Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cache.c -o cache.o 2021-05-16T17:40:27.2394536Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:40:27.2829516Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o cachem.so cache.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:40:27.3033025Z installing to /home/runner/work/_temp/Library/00LOCK-cachem/00new/cachem/libs 2021-05-16T17:40:27.3047482Z ** R 2021-05-16T17:40:27.3168906Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:40:27.8011305Z ** help 2021-05-16T17:40:27.8239311Z *** installing help indices 2021-05-16T17:40:27.8427769Z ** building package indices 2021-05-16T17:40:28.0282076Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:40:28.2144818Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:40:28.2316452Z ** testing if installed package can be loaded from final location 2021-05-16T17:40:28.4193135Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:40:28.4204266Z * DONE (cachem) 2021-05-16T17:40:28.8439952Z * installing *source* package ‘openssl’ ... 2021-05-16T17:40:28.8563372Z ** package ‘openssl’ successfully unpacked and MD5 sums checked 2021-05-16T17:40:28.8566365Z ** using staged installation 2021-05-16T17:40:28.8653096Z Found pkg-config cflags and libs! 2021-05-16T17:40:28.9461520Z Using PKG_CFLAGS= 2021-05-16T17:40:29.0873966Z Using PKG_LIBS=-l:libssl.so.1.1 -l:libcrypto.so.1.1 2021-05-16T17:40:29.1029085Z ** libs 2021-05-16T17:40:29.1085767Z rm -f aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o openssl.so bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o 2021-05-16T17:40:29.1118106Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o 2021-05-16T17:40:29.1925777Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T17:40:29.2676111Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bignum.c -o bignum.o 2021-05-16T17:40:29.3641073Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cert.c -o cert.o 2021-05-16T17:40:29.5077552Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c compatibility.c -o compatibility.o 2021-05-16T17:40:29.5698334Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffie.c -o diffie.o 2021-05-16T17:40:29.6590466Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c envelope.c -o envelope.o 2021-05-16T17:40:29.7735181Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error.c -o error.o 2021-05-16T17:40:29.8248136Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c hash.c -o hash.o 2021-05-16T17:40:29.9171114Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c info.c -o info.o 2021-05-16T17:40:29.9794866Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keygen.c -o keygen.o 2021-05-16T17:40:30.0784509Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keys.c -o keys.o 2021-05-16T17:40:30.2044702Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c onload.c -o onload.o 2021-05-16T17:40:30.2907314Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c openssh.c -o openssh.o 2021-05-16T17:40:30.4697403Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c password.c -o password.o 2021-05-16T17:40:30.5212833Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pbkdf.c -o pbkdf.o 2021-05-16T17:40:30.5623659Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pem.c -o pem.o 2021-05-16T17:40:30.6866084Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs12.c -o pkcs12.o 2021-05-16T17:40:30.8220551Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs7.c -o pkcs7.o 2021-05-16T17:40:30.9424216Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rand.c -o rand.o 2021-05-16T17:40:30.9868373Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rsa.c -o rsa.o 2021-05-16T17:40:31.0808457Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signing.c -o signing.o 2021-05-16T17:40:31.1978188Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c ssl.c -o ssl.o 2021-05-16T17:40:31.3363279Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stream.c -o stream.o 2021-05-16T17:40:31.4485263Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write.c -o write.o 2021-05-16T17:40:31.5721676Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c x25519.c -o x25519.o 2021-05-16T17:40:31.6921987Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bcrypt/bcrypt_pbkdf.c -o bcrypt/bcrypt_pbkdf.o 2021-05-16T17:40:31.7588949Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bcrypt/blowfish.c -o bcrypt/blowfish.o 2021-05-16T17:40:31.9295806Z ar rcs bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o 2021-05-16T17:40:31.9350077Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o openssl.so aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o -Lbcrypt -lstatbcrypt -l:libssl.so.1.1 -l:libcrypto.so.1.1 -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:40:31.9889283Z installing to /home/runner/work/_temp/Library/00LOCK-openssl/00new/openssl/libs 2021-05-16T17:40:31.9907025Z ** R 2021-05-16T17:40:32.0008819Z ** inst 2021-05-16T17:40:32.0055766Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:40:32.8799431Z ** help 2021-05-16T17:40:32.9317781Z *** installing help indices 2021-05-16T17:40:32.9684224Z ** building package indices 2021-05-16T17:40:33.1780340Z ** installing vignettes 2021-05-16T17:40:33.1921735Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:40:33.3731756Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:40:33.3905567Z ** testing if installed package can be loaded from final location 2021-05-16T17:40:33.5812018Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:40:33.5825398Z * DONE (openssl) 2021-05-16T17:40:33.7935006Z * installing *source* package ‘memoise’ ... 2021-05-16T17:40:33.7945732Z ** package ‘memoise’ successfully unpacked and MD5 sums checked 2021-05-16T17:40:33.7946782Z ** using staged installation 2021-05-16T17:40:33.8094834Z ** R 2021-05-16T17:40:33.8192637Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:40:34.1974934Z ** help 2021-05-16T17:40:34.2215473Z *** installing help indices 2021-05-16T17:40:34.2448948Z ** building package indices 2021-05-16T17:40:34.4373660Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:40:34.6249831Z ** testing if installed package can be loaded from final location 2021-05-16T17:40:34.8138962Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:40:34.8144713Z * DONE (memoise) 2021-05-16T17:40:35.1148907Z * installing *source* package ‘httr’ ... 2021-05-16T17:40:35.1195980Z ** package ‘httr’ successfully unpacked and MD5 sums checked 2021-05-16T17:40:35.1197125Z ** using staged installation 2021-05-16T17:40:35.1344404Z ** R 2021-05-16T17:40:35.1508631Z ** demo 2021-05-16T17:40:35.1518878Z ** inst 2021-05-16T17:40:35.1531771Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:40:37.4358036Z ** help 2021-05-16T17:40:37.5861480Z *** installing help indices 2021-05-16T17:40:37.6843967Z ** building package indices 2021-05-16T17:40:37.9530623Z ** installing vignettes 2021-05-16T17:40:37.9596327Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:40:38.1294576Z ** testing if installed package can be loaded from final location 2021-05-16T17:40:38.3433943Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:40:38.3463407Z * DONE (httr) 2021-05-16T17:40:38.5676337Z * installing *source* package ‘credentials’ ... 2021-05-16T17:40:38.5692639Z ** package ‘credentials’ successfully unpacked and MD5 sums checked 2021-05-16T17:40:38.5694305Z ** using staged installation 2021-05-16T17:40:38.5820484Z ** R 2021-05-16T17:40:38.5861625Z ** inst 2021-05-16T17:40:38.5872198Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:40:38.9949714Z ** help 2021-05-16T17:40:39.0126581Z *** installing help indices 2021-05-16T17:40:39.0322073Z ** building package indices 2021-05-16T17:40:39.2120148Z ** installing vignettes 2021-05-16T17:40:39.2172465Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:40:39.4645502Z ** testing if installed package can be loaded from final location 2021-05-16T17:40:39.6895529Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:40:39.6901364Z * DONE (credentials) 2021-05-16T17:40:39.9146721Z * installing *source* package ‘gh’ ... 2021-05-16T17:40:39.9163755Z ** package ‘gh’ successfully unpacked and MD5 sums checked 2021-05-16T17:40:39.9164906Z ** using staged installation 2021-05-16T17:40:39.9303382Z ** R 2021-05-16T17:40:39.9379981Z ** inst 2021-05-16T17:40:39.9388602Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:40:40.8999998Z ** help 2021-05-16T17:40:40.9276146Z *** installing help indices 2021-05-16T17:40:40.9562292Z ** building package indices 2021-05-16T17:40:41.1438578Z ** installing vignettes 2021-05-16T17:40:41.1493165Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:40:41.3824228Z ** testing if installed package can be loaded from final location 2021-05-16T17:40:41.6253721Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:40:41.6267751Z * DONE (gh) 2021-05-16T17:40:41.8732726Z * installing *source* package ‘gert’ ... 2021-05-16T17:40:41.8758732Z ** package ‘gert’ successfully unpacked and MD5 sums checked 2021-05-16T17:40:41.8759870Z ** using staged installation 2021-05-16T17:40:41.8855558Z Found pkg-config cflags and libs! 2021-05-16T17:40:41.9655965Z Using PKG_CFLAGS= 2021-05-16T17:40:41.9657408Z Using PKG_LIBS=-lgit2 2021-05-16T17:40:42.0016941Z Configuration OK! 2021-05-16T17:40:42.0165572Z ** libs 2021-05-16T17:40:42.0214686Z rm -f gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o 2021-05-16T17:40:42.0238636Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c branch.c -o branch.o 2021-05-16T17:40:42.2213446Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c clone.c -o clone.o 2021-05-16T17:40:42.4341282Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c commit.c -o commit.o 2021-05-16T17:40:42.6444568Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c config.c -o config.o 2021-05-16T17:40:42.7245275Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c conflicts.c -o conflicts.o 2021-05-16T17:40:42.7937600Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c files.c -o files.o 2021-05-16T17:40:42.9309650Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:40:42.9906985Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c merge.c -o merge.o 2021-05-16T17:40:43.0892379Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rebase.c -o rebase.o 2021-05-16T17:40:43.1950393Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c stash.c -o stash.o 2021-05-16T17:40:43.2761705Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c submodules.c -o submodules.o 2021-05-16T17:40:43.3818391Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c tag.c -o tag.o 2021-05-16T17:40:43.4596318Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T17:40:43.5733076Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-16T17:40:43.6442989Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o -lgit2 -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:40:43.6735982Z installing to /home/runner/work/_temp/Library/00LOCK-gert/00new/gert/libs 2021-05-16T17:40:43.6747841Z ** R 2021-05-16T17:40:43.6831577Z ** inst 2021-05-16T17:40:43.6840370Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:40:44.3753590Z ** help 2021-05-16T17:40:44.4326045Z *** installing help indices 2021-05-16T17:40:44.4741317Z ** building package indices 2021-05-16T17:40:44.6836312Z ** installing vignettes 2021-05-16T17:40:44.6929703Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:40:44.9059513Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:40:44.9233778Z ** testing if installed package can be loaded from final location 2021-05-16T17:40:45.1419557Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:40:45.1430618Z * DONE (gert) 2021-05-16T17:40:45.5220858Z * installing *source* package ‘usethis’ ... 2021-05-16T17:40:45.5297226Z ** package ‘usethis’ successfully unpacked and MD5 sums checked 2021-05-16T17:40:45.5298401Z ** using staged installation 2021-05-16T17:40:45.5531020Z ** R 2021-05-16T17:40:45.5851626Z ** inst 2021-05-16T17:40:45.5882845Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:40:48.0060713Z ** help 2021-05-16T17:40:48.1920035Z *** installing help indices 2021-05-16T17:40:48.3097833Z *** copying figures 2021-05-16T17:40:48.3104129Z ** building package indices 2021-05-16T17:40:48.5976581Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:40:48.8663518Z ** testing if installed package can be loaded from final location 2021-05-16T17:40:49.1771803Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:40:49.1800866Z * DONE (usethis) 2021-05-16T17:40:49.1907364Z 2021-05-16T17:40:49.1908143Z The downloaded source packages are in 2021-05-16T17:40:49.1909356Z ‘/tmp/Rtmp7Hky4l/downloaded_packages’ 2021-05-16T17:40:49.1909890Z Running `R CMD build`... 2021-05-16T17:40:51.2127879Z * checking for file ‘/tmp/Rtmp7Hky4l/remotes72be1913e5c/ropensci-tic-3b4dfb8/DESCRIPTION’ ... OK 2021-05-16T17:40:51.2129369Z * preparing ‘tic’: 2021-05-16T17:40:51.2130388Z * checking DESCRIPTION meta-information ... OK 2021-05-16T17:40:51.2131438Z * installing the package to process help pages 2021-05-16T17:40:51.2132690Z * checking for LF line-endings in source and make files and shell scripts 2021-05-16T17:40:51.2133681Z * checking for empty or unneeded directories 2021-05-16T17:40:51.2134887Z Removed empty directory ‘tic/.circleci’ 2021-05-16T17:40:51.2136817Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T17:40:51.2137738Z Removed empty directory ‘tic/pkgdown’ 2021-05-16T17:40:51.2139638Z (as ‘lib’ is unspecified) 2021-05-16T17:40:51.2140263Z * building ‘tic_0.10.0.tar.gz’ 2021-05-16T17:40:51.5351967Z * installing *source* package ‘tic’ ... 2021-05-16T17:40:51.5378648Z ** using staged installation 2021-05-16T17:40:51.5605377Z ** R 2021-05-16T17:40:51.5788549Z ** inst 2021-05-16T17:40:51.5820127Z ** preparing package for lazy loading 2021-05-16T17:40:51.9214823Z ** help 2021-05-16T17:40:52.0668199Z *** installing help indices 2021-05-16T17:40:52.1549896Z *** copying figures 2021-05-16T17:40:52.1553980Z ** building package indices 2021-05-16T17:40:52.4108157Z ** installing vignettes 2021-05-16T17:40:52.4152839Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:40:52.6598667Z ** testing if installed package can be loaded from final location 2021-05-16T17:40:52.9517123Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:40:52.9550139Z * DONE (tic) 2021-05-16T17:40:52.9681740Z Using github PAT from envvar GITHUB_PAT 2021-05-16T17:40:53.1674136Z Downloading GitHub repo muschellij2/ghtravis@HEAD 2021-05-16T17:40:53.9351320Z desc (1.3.0 -> 7be86f2f7...) [GitHub] 2021-05-16T17:40:53.9354327Z Installing 37 packages: utf8, vctrs, pkgconfig, pillar, tibble, rematch2, fansi, diffobj, waldo, ps, processx, praise, pkgload, evaluate, ellipsis, digest, callr, brio, xml2, xfun, markdown, highr, stringr, stringi, Rcpp, knitr, commonmark, brew, xopen, sessioninfo, prettyunits, pkgbuild, testthat, rversions, roxygen2, rcmdcheck, devtools 2021-05-16T17:40:53.9356426Z utf8 (NA -> 1.2.1 ) [CRAN] 2021-05-16T17:40:53.9357454Z vctrs (NA -> 0.3.8 ) [CRAN] 2021-05-16T17:40:53.9358454Z pkgconfig (NA -> 2.0.3 ) [CRAN] 2021-05-16T17:40:53.9359407Z pillar (NA -> 1.6.1 ) [CRAN] 2021-05-16T17:40:53.9360374Z tibble (NA -> 3.1.2 ) [CRAN] 2021-05-16T17:40:53.9361305Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T17:40:53.9362139Z (as ‘lib’ is unspecified) 2021-05-16T17:40:53.9363131Z rematch2 (NA -> 2.1.2 ) [CRAN] 2021-05-16T17:40:53.9364079Z fansi (NA -> 0.4.2 ) [CRAN] 2021-05-16T17:40:53.9365006Z diffobj (NA -> 0.3.4 ) [CRAN] 2021-05-16T17:40:53.9365910Z waldo (NA -> 0.2.5 ) [CRAN] 2021-05-16T17:40:53.9366821Z ps (NA -> 1.6.0 ) [CRAN] 2021-05-16T17:40:53.9367732Z processx (NA -> 3.5.2 ) [CRAN] 2021-05-16T17:40:53.9368680Z praise (NA -> 1.0.0 ) [CRAN] 2021-05-16T17:40:53.9369612Z pkgload (NA -> 1.2.1 ) [CRAN] 2021-05-16T17:40:53.9370548Z evaluate (NA -> 0.14 ) [CRAN] 2021-05-16T17:40:53.9371504Z ellipsis (NA -> 0.3.2 ) [CRAN] 2021-05-16T17:40:53.9372423Z digest (NA -> 0.6.27 ) [CRAN] 2021-05-16T17:40:53.9374693Z callr (NA -> 3.7.0 ) [CRAN] 2021-05-16T17:40:53.9376014Z brio (NA -> 1.1.2 ) [CRAN] 2021-05-16T17:40:53.9376854Z xml2 (NA -> 1.3.2 ) [CRAN] 2021-05-16T17:40:53.9377674Z xfun (NA -> 0.23 ) [CRAN] 2021-05-16T17:40:53.9378521Z markdown (NA -> 1.1 ) [CRAN] 2021-05-16T17:40:53.9379379Z highr (NA -> 0.9 ) [CRAN] 2021-05-16T17:40:53.9380211Z stringr (NA -> 1.4.0 ) [CRAN] 2021-05-16T17:40:53.9381076Z stringi (NA -> 1.6.1 ) [CRAN] 2021-05-16T17:40:53.9381915Z Rcpp (NA -> 1.0.6 ) [CRAN] 2021-05-16T17:40:53.9382756Z knitr (NA -> 1.33 ) [CRAN] 2021-05-16T17:40:53.9383596Z commonmark (NA -> 1.7 ) [CRAN] 2021-05-16T17:40:53.9384515Z brew (NA -> 1.0-6 ) [CRAN] 2021-05-16T17:40:53.9385361Z xopen (NA -> 1.0.0 ) [CRAN] 2021-05-16T17:40:53.9386218Z sessioninfo (NA -> 1.1.1 ) [CRAN] 2021-05-16T17:40:53.9387132Z prettyunits (NA -> 1.1.1 ) [CRAN] 2021-05-16T17:40:53.9388016Z pkgbuild (NA -> 1.2.0 ) [CRAN] 2021-05-16T17:40:53.9388890Z testthat (NA -> 3.0.2 ) [CRAN] 2021-05-16T17:40:53.9389906Z rversions (NA -> 2.0.2 ) [CRAN] 2021-05-16T17:40:53.9390796Z roxygen2 (NA -> 7.1.1 ) [CRAN] 2021-05-16T17:40:53.9391682Z rcmdcheck (NA -> 1.3.3 ) [CRAN] 2021-05-16T17:40:53.9393129Z devtools (NA -> 2.4.1 ) [CRAN] 2021-05-16T17:41:07.7277577Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/utf8_1.2.1.tar.gz' 2021-05-16T17:41:09.0007550Z Content type 'binary/octet-stream' length 237667 bytes (232 KB) 2021-05-16T17:41:09.3771020Z ================================================== 2021-05-16T17:41:09.3771985Z downloaded 232 KB 2021-05-16T17:41:09.3772515Z 2021-05-16T17:41:09.3812546Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/vctrs_0.3.8.tar.gz' 2021-05-16T17:41:10.8850045Z Content type 'binary/octet-stream' length 784938 bytes (766 KB) 2021-05-16T17:41:11.3693214Z ================================================== 2021-05-16T17:41:11.3694384Z downloaded 766 KB 2021-05-16T17:41:11.3694930Z 2021-05-16T17:41:11.3727697Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgconfig_2.0.3.tar.gz' 2021-05-16T17:41:12.4236159Z Content type 'application/x-tar' length 6108 bytes 2021-05-16T17:41:12.4239426Z ================================================== 2021-05-16T17:41:12.4240093Z downloaded 6108 bytes 2021-05-16T17:41:12.4240733Z 2021-05-16T17:41:12.4278383Z trying URL 'https://cloud.r-project.org/src/contrib/pillar_1.6.1.tar.gz' 2021-05-16T17:41:12.5640418Z Content type 'application/x-gzip' length 1111747 bytes (1.1 MB) 2021-05-16T17:41:12.5954399Z ================================================== 2021-05-16T17:41:12.5955273Z downloaded 1.1 MB 2021-05-16T17:41:12.5955779Z 2021-05-16T17:41:12.5978067Z trying URL 'https://cloud.r-project.org/src/contrib/tibble_3.1.2.tar.gz' 2021-05-16T17:41:12.6290021Z Content type 'application/x-gzip' length 686145 bytes (670 KB) 2021-05-16T17:41:12.6532278Z ================================================== 2021-05-16T17:41:12.6532779Z downloaded 670 KB 2021-05-16T17:41:12.6533051Z 2021-05-16T17:41:12.6555434Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rematch2_2.1.2.tar.gz' 2021-05-16T17:41:13.7899768Z Content type 'binary/octet-stream' length 13441 bytes (13 KB) 2021-05-16T17:41:13.7900559Z ================================================== 2021-05-16T17:41:13.7901006Z downloaded 13 KB 2021-05-16T17:41:13.7901308Z 2021-05-16T17:41:13.7941318Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fansi_0.4.2.tar.gz' 2021-05-16T17:41:14.9286326Z Content type 'binary/octet-stream' length 270970 bytes (264 KB) 2021-05-16T17:41:15.3095846Z ================================================== 2021-05-16T17:41:15.3096425Z downloaded 264 KB 2021-05-16T17:41:15.3096811Z 2021-05-16T17:41:15.3135434Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/diffobj_0.3.4.tar.gz' 2021-05-16T17:41:16.4428937Z Content type 'binary/octet-stream' length 476003 bytes (464 KB) 2021-05-16T17:41:16.7385744Z ================================================== 2021-05-16T17:41:16.7387098Z downloaded 464 KB 2021-05-16T17:41:16.7387415Z 2021-05-16T17:41:16.7426335Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/waldo_0.2.5.tar.gz' 2021-05-16T17:41:17.8924681Z Content type 'binary/octet-stream' length 26261 bytes (25 KB) 2021-05-16T17:41:17.8925490Z ================================================== 2021-05-16T17:41:17.8925943Z downloaded 25 KB 2021-05-16T17:41:17.8926248Z 2021-05-16T17:41:17.8965019Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ps_1.6.0.tar.gz' 2021-05-16T17:41:19.0264175Z Content type 'binary/octet-stream' length 120042 bytes (117 KB) 2021-05-16T17:41:19.1398793Z ================================================== 2021-05-16T17:41:19.1399881Z downloaded 117 KB 2021-05-16T17:41:19.1400413Z 2021-05-16T17:41:19.1440025Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/processx_3.5.2.tar.gz' 2021-05-16T17:41:20.2729512Z Content type 'binary/octet-stream' length 141949 bytes (138 KB) 2021-05-16T17:41:20.4005375Z ================================================== 2021-05-16T17:41:20.4006545Z downloaded 138 KB 2021-05-16T17:41:20.4007098Z 2021-05-16T17:41:20.4042853Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/praise_1.0.0.tar.gz' 2021-05-16T17:41:21.6511574Z Content type 'application/x-tar' length 6100 bytes 2021-05-16T17:41:21.6512325Z ================================================== 2021-05-16T17:41:21.6512796Z downloaded 6100 bytes 2021-05-16T17:41:21.6513112Z 2021-05-16T17:41:21.6555524Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgload_1.2.1.tar.gz' 2021-05-16T17:41:22.7121615Z Content type 'binary/octet-stream' length 60723 bytes (59 KB) 2021-05-16T17:41:22.7564006Z ================================================== 2021-05-16T17:41:22.7564915Z downloaded 59 KB 2021-05-16T17:41:22.7565373Z 2021-05-16T17:41:22.7600382Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/evaluate_0.14.tar.gz' 2021-05-16T17:41:23.7960657Z Content type 'application/x-tar' length 23661 bytes (23 KB) 2021-05-16T17:41:23.7961924Z ================================================== 2021-05-16T17:41:23.7962538Z downloaded 23 KB 2021-05-16T17:41:23.7962978Z 2021-05-16T17:41:23.7995905Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ellipsis_0.3.2.tar.gz' 2021-05-16T17:41:24.9354698Z Content type 'binary/octet-stream' length 8130 bytes 2021-05-16T17:41:24.9356119Z ================================================== 2021-05-16T17:41:24.9356845Z downloaded 8130 bytes 2021-05-16T17:41:24.9357356Z 2021-05-16T17:41:24.9475442Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/digest_0.6.27.tar.gz' 2021-05-16T17:41:26.1328916Z Content type 'binary/octet-stream' length 164442 bytes (160 KB) 2021-05-16T17:41:26.3502388Z ================================================== 2021-05-16T17:41:26.3503506Z downloaded 160 KB 2021-05-16T17:41:26.3504048Z 2021-05-16T17:41:26.3539297Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/callr_3.7.0.tar.gz' 2021-05-16T17:41:27.4811272Z Content type 'binary/octet-stream' length 74923 bytes (73 KB) 2021-05-16T17:41:27.5010707Z ================================================== 2021-05-16T17:41:27.5011302Z downloaded 73 KB 2021-05-16T17:41:27.5011618Z 2021-05-16T17:41:27.5053314Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brio_1.1.2.tar.gz' 2021-05-16T17:41:28.6568528Z Content type 'binary/octet-stream' length 12096 bytes (11 KB) 2021-05-16T17:41:28.6569647Z ================================================== 2021-05-16T17:41:28.6570117Z downloaded 11 KB 2021-05-16T17:41:28.6570410Z 2021-05-16T17:41:28.6610891Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xml2_1.3.2.tar.gz' 2021-05-16T17:41:29.9108331Z Content type 'binary/octet-stream' length 272736 bytes (266 KB) 2021-05-16T17:41:30.2685845Z ================================================== 2021-05-16T17:41:30.2686383Z downloaded 266 KB 2021-05-16T17:41:30.2686691Z 2021-05-16T17:41:30.2724028Z trying URL 'https://cloud.r-project.org/src/contrib/xfun_0.23.tar.gz' 2021-05-16T17:41:30.3023123Z Content type 'application/x-gzip' length 111696 bytes (109 KB) 2021-05-16T17:41:30.3128839Z ================================================== 2021-05-16T17:41:30.3129336Z downloaded 109 KB 2021-05-16T17:41:30.3129593Z 2021-05-16T17:41:30.3150394Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/markdown_1.1.tar.gz' 2021-05-16T17:41:31.5053305Z Content type 'application/x-tar' length 81636 bytes (79 KB) 2021-05-16T17:41:31.5981135Z ================================================== 2021-05-16T17:41:31.5983188Z downloaded 79 KB 2021-05-16T17:41:31.5985837Z 2021-05-16T17:41:31.6026596Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/highr_0.9.tar.gz' 2021-05-16T17:41:32.7374018Z Content type 'binary/octet-stream' length 15361 bytes (15 KB) 2021-05-16T17:41:32.7374779Z ================================================== 2021-05-16T17:41:32.7375244Z downloaded 15 KB 2021-05-16T17:41:32.7378542Z 2021-05-16T17:41:32.7411621Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringr_1.4.0.tar.gz' 2021-05-16T17:41:33.8836422Z Content type 'application/x-tar' length 135526 bytes (132 KB) 2021-05-16T17:41:34.1218637Z ================================================== 2021-05-16T17:41:34.1219181Z downloaded 132 KB 2021-05-16T17:41:34.1219477Z 2021-05-16T17:41:34.1259790Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringi_1.6.1.tar.gz' 2021-05-16T17:41:35.3295119Z Content type 'binary/octet-stream' length 7574951 bytes (7.2 MB) 2021-05-16T17:41:36.1730720Z ================================================== 2021-05-16T17:41:36.1731651Z downloaded 7.2 MB 2021-05-16T17:41:36.1732180Z 2021-05-16T17:41:36.1770485Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/Rcpp_1.0.6.tar.gz' 2021-05-16T17:41:37.3183811Z Content type 'binary/octet-stream' length 2954251 bytes (2.8 MB) 2021-05-16T17:41:37.9879836Z ================================================== 2021-05-16T17:41:37.9880383Z downloaded 2.8 MB 2021-05-16T17:41:37.9880657Z 2021-05-16T17:41:37.9918175Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/knitr_1.33.tar.gz' 2021-05-16T17:41:39.1358416Z Content type 'binary/octet-stream' length 890176 bytes (869 KB) 2021-05-16T17:41:39.5592814Z ================================================== 2021-05-16T17:41:39.5593617Z downloaded 869 KB 2021-05-16T17:41:39.5593978Z 2021-05-16T17:41:39.5650814Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/commonmark_1.7.tar.gz' 2021-05-16T17:41:40.5947152Z Content type 'application/x-tar' length 134376 bytes (131 KB) 2021-05-16T17:41:40.8665405Z ================================================== 2021-05-16T17:41:40.8666331Z downloaded 131 KB 2021-05-16T17:41:40.8666790Z 2021-05-16T17:41:40.8703366Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brew_1.0-6.tar.gz' 2021-05-16T17:41:42.3026515Z Content type 'application/x-tar' length 83765 bytes (81 KB) 2021-05-16T17:41:42.3977784Z ================================================== 2021-05-16T17:41:42.3978715Z downloaded 81 KB 2021-05-16T17:41:42.3979239Z 2021-05-16T17:41:42.4015966Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xopen_1.0.0.tar.gz' 2021-05-16T17:41:43.5361342Z Content type 'application/x-tar' length 11313 bytes (11 KB) 2021-05-16T17:41:43.5362618Z ================================================== 2021-05-16T17:41:43.5363261Z downloaded 11 KB 2021-05-16T17:41:43.5363721Z 2021-05-16T17:41:43.5399784Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sessioninfo_1.1.1.tar.gz' 2021-05-16T17:41:44.7848638Z Content type 'application/x-tar' length 45020 bytes (43 KB) 2021-05-16T17:41:44.7858040Z ================================================== 2021-05-16T17:41:44.7858545Z downloaded 43 KB 2021-05-16T17:41:44.7858858Z 2021-05-16T17:41:44.7899358Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/prettyunits_1.1.1.tar.gz' 2021-05-16T17:41:45.9258058Z Content type 'binary/octet-stream' length 10377 bytes (10 KB) 2021-05-16T17:41:45.9258777Z ================================================== 2021-05-16T17:41:45.9259239Z downloaded 10 KB 2021-05-16T17:41:45.9259542Z 2021-05-16T17:41:45.9295945Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgbuild_1.2.0.tar.gz' 2021-05-16T17:41:47.0584977Z Content type 'binary/octet-stream' length 30622 bytes (29 KB) 2021-05-16T17:41:47.0588477Z ================================================== 2021-05-16T17:41:47.0589949Z downloaded 29 KB 2021-05-16T17:41:47.0590258Z 2021-05-16T17:41:47.0633101Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/testthat_3.0.2.tar.gz' 2021-05-16T17:41:48.1917040Z Content type 'binary/octet-stream' length 678280 bytes (662 KB) 2021-05-16T17:41:48.5723627Z ================================================== 2021-05-16T17:41:48.5724866Z downloaded 662 KB 2021-05-16T17:41:48.5726248Z 2021-05-16T17:41:48.5763967Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rversions_2.0.2.tar.gz' 2021-05-16T17:41:49.7206214Z Content type 'binary/octet-stream' length 40913 bytes (39 KB) 2021-05-16T17:41:49.8257959Z ================================================== 2021-05-16T17:41:49.8258491Z downloaded 39 KB 2021-05-16T17:41:49.8258804Z 2021-05-16T17:41:49.8294608Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/roxygen2_7.1.1.tar.gz' 2021-05-16T17:41:51.2649170Z Content type 'binary/octet-stream' length 255098 bytes (249 KB) 2021-05-16T17:41:51.5183176Z ================================================== 2021-05-16T17:41:51.5183729Z downloaded 249 KB 2021-05-16T17:41:51.5184023Z 2021-05-16T17:41:51.5219117Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rcmdcheck_1.3.3.tar.gz' 2021-05-16T17:41:52.6784410Z Content type 'application/x-tar' length 44991 bytes (43 KB) 2021-05-16T17:41:52.6961966Z ================================================== 2021-05-16T17:41:52.6962828Z downloaded 43 KB 2021-05-16T17:41:52.6963345Z 2021-05-16T17:41:52.6999627Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/devtools_2.4.1.tar.gz' 2021-05-16T17:41:53.8416467Z Content type 'binary/octet-stream' length 370450 bytes (361 KB) 2021-05-16T17:41:54.1167482Z ================================================== 2021-05-16T17:41:54.1168536Z downloaded 361 KB 2021-05-16T17:41:54.1169070Z 2021-05-16T17:41:54.4179886Z * installing *source* package ‘utf8’ ... 2021-05-16T17:41:54.4240356Z ** package ‘utf8’ successfully unpacked and MD5 sums checked 2021-05-16T17:41:54.4241530Z ** using staged installation 2021-05-16T17:41:54.4364642Z ** libs 2021-05-16T17:41:54.4419057Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c as_utf8.c -o as_utf8.o 2021-05-16T17:41:54.5054998Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c bytes.c -o bytes.o 2021-05-16T17:41:54.6407230Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c context.c -o context.o 2021-05-16T17:41:54.6980290Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:41:54.7361755Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c render.c -o render.o 2021-05-16T17:41:54.7935792Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c render_table.c -o render_table.o 2021-05-16T17:41:54.9482908Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c string.c -o string.o 2021-05-16T17:41:55.0063264Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c text.c -o text.o 2021-05-16T17:41:55.1299892Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_encode.c -o utf8_encode.o 2021-05-16T17:41:55.2058021Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_format.c -o utf8_format.o 2021-05-16T17:41:55.2911053Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_normalize.c -o utf8_normalize.o 2021-05-16T17:41:55.3554140Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_valid.c -o utf8_valid.o 2021-05-16T17:41:55.4101999Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_width.c -o utf8_width.o 2021-05-16T17:41:55.4681271Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c util.c -o util.o 2021-05-16T17:41:55.5190900Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/array.c -o utf8lite/src/array.o 2021-05-16T17:41:55.5702420Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/char.c -o utf8lite/src/char.o 2021-05-16T17:41:55.6342656Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/encode.c -o utf8lite/src/encode.o 2021-05-16T17:41:55.6886828Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/error.c -o utf8lite/src/error.o 2021-05-16T17:41:55.7256954Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/escape.c -o utf8lite/src/escape.o 2021-05-16T17:41:55.7856710Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/graph.c -o utf8lite/src/graph.o 2021-05-16T17:41:55.8285891Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o 2021-05-16T17:41:56.0206488Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o 2021-05-16T17:41:56.3058645Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/render.c -o utf8lite/src/render.o 2021-05-16T17:41:56.4680033Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/text.c -o utf8lite/src/text.o 2021-05-16T17:41:56.5331536Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o 2021-05-16T17:41:56.5911595Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o 2021-05-16T17:41:56.6590070Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o 2021-05-16T17:41:56.7255215Z ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o 2021-05-16T17:41:56.7325675Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:41:56.7655850Z installing to /home/runner/work/_temp/Library/00LOCK-utf8/00new/utf8/libs 2021-05-16T17:41:56.7657104Z ** R 2021-05-16T17:41:56.7727525Z ** inst 2021-05-16T17:41:56.7735824Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:41:57.1956246Z ** help 2021-05-16T17:41:57.2235563Z *** installing help indices 2021-05-16T17:41:57.2468457Z ** building package indices 2021-05-16T17:41:57.4369416Z ** installing vignettes 2021-05-16T17:41:57.4420380Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:41:57.6113174Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:41:57.6290202Z ** testing if installed package can be loaded from final location 2021-05-16T17:41:57.7975471Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:41:57.7983718Z * DONE (utf8) 2021-05-16T17:41:57.9975580Z * installing *source* package ‘pkgconfig’ ... 2021-05-16T17:41:57.9983808Z ** package ‘pkgconfig’ successfully unpacked and MD5 sums checked 2021-05-16T17:41:57.9984851Z ** using staged installation 2021-05-16T17:41:58.0091463Z ** R 2021-05-16T17:41:58.0115817Z ** inst 2021-05-16T17:41:58.0122985Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:41:58.2294813Z ** help 2021-05-16T17:41:58.2496561Z *** installing help indices 2021-05-16T17:41:58.2658227Z ** building package indices 2021-05-16T17:41:58.4480252Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:41:58.6135488Z ** testing if installed package can be loaded from final location 2021-05-16T17:41:58.7762976Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:41:58.7767556Z * DONE (pkgconfig) 2021-05-16T17:41:59.0369301Z * installing *source* package ‘fansi’ ... 2021-05-16T17:41:59.0402116Z ** package ‘fansi’ successfully unpacked and MD5 sums checked 2021-05-16T17:41:59.0403296Z ** using staged installation 2021-05-16T17:41:59.0522630Z ** libs 2021-05-16T17:41:59.0596424Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c assumptions.c -o assumptions.o 2021-05-16T17:41:59.0974311Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c has.c -o has.o 2021-05-16T17:41:59.1546626Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:41:59.1980745Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c nchar.c -o nchar.o 2021-05-16T17:41:59.2642042Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read.c -o read.o 2021-05-16T17:41:59.6913887Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rnchar.c -o rnchar.o 2021-05-16T17:41:59.7275785Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c state.c -o state.o 2021-05-16T17:42:00.0689955Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c strip.c -o strip.o 2021-05-16T17:42:00.2000725Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c strsplit.c -o strsplit.o 2021-05-16T17:42:00.2442678Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c tabs.c -o tabs.o 2021-05-16T17:42:00.3607078Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c tohtml.c -o tohtml.o 2021-05-16T17:42:00.5924777Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unhandled.c -o unhandled.o 2021-05-16T17:42:00.6898628Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unique.c -o unique.o 2021-05-16T17:42:00.7419468Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-16T17:42:00.7964914Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T17:42:00.9512170Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c wrap.c -o wrap.o 2021-05-16T17:42:01.2449300Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fansi.so assumptions.o has.o init.o nchar.o read.o rnchar.o state.o strip.o strsplit.o tabs.o tohtml.o unhandled.o unique.o utf8.o utils.o wrap.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:42:01.2736375Z installing to /home/runner/work/_temp/Library/00LOCK-fansi/00new/fansi/libs 2021-05-16T17:42:01.2737631Z ** R 2021-05-16T17:42:01.2826150Z ** inst 2021-05-16T17:42:01.2835273Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:42:01.8450202Z ** help 2021-05-16T17:42:01.9069496Z *** installing help indices 2021-05-16T17:42:01.9426532Z ** building package indices 2021-05-16T17:42:02.1519118Z ** installing vignettes 2021-05-16T17:42:02.1572975Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:42:02.3277159Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:42:02.3446479Z ** testing if installed package can be loaded from final location 2021-05-16T17:42:02.5169640Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:42:02.5178235Z * DONE (fansi) 2021-05-16T17:42:02.9268932Z * installing *source* package ‘diffobj’ ... 2021-05-16T17:42:02.9364937Z ** package ‘diffobj’ successfully unpacked and MD5 sums checked 2021-05-16T17:42:02.9366307Z ** using staged installation 2021-05-16T17:42:02.9506393Z ** libs 2021-05-16T17:42:02.9562574Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diff.c -o diff.o 2021-05-16T17:42:03.1509339Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffobj.c -o diffobj.o 2021-05-16T17:42:03.2080425Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:42:03.2518596Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o diffobj.so diff.o diffobj.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:42:03.2735493Z installing to /home/runner/work/_temp/Library/00LOCK-diffobj/00new/diffobj/libs 2021-05-16T17:42:03.2742541Z ** R 2021-05-16T17:42:03.3126988Z ** inst 2021-05-16T17:42:03.3142326Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:42:09.0134793Z ** help 2021-05-16T17:42:09.2009724Z *** installing help indices 2021-05-16T17:42:09.3328604Z ** building package indices 2021-05-16T17:42:09.6014921Z ** installing vignettes 2021-05-16T17:42:09.6079251Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:42:09.8866528Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:42:09.9035021Z ** testing if installed package can be loaded from final location 2021-05-16T17:42:10.2988879Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:42:10.3062437Z * DONE (diffobj) 2021-05-16T17:42:10.5874599Z * installing *source* package ‘ps’ ... 2021-05-16T17:42:10.5912278Z ** package ‘ps’ successfully unpacked and MD5 sums checked 2021-05-16T17:42:10.5913384Z ** using staged installation 2021-05-16T17:42:10.7762399Z ** libs 2021-05-16T17:42:10.7811636Z gcc -g -O2 -Wall px.c -o px 2021-05-16T17:42:10.9020918Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:42:10.9638442Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-common.c -o api-common.o 2021-05-16T17:42:11.0252214Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c common.c -o common.o 2021-05-16T17:42:11.0872325Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c extra.c -o extra.o 2021-05-16T17:42:11.2373755Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dummy.c -o dummy.o 2021-05-16T17:42:11.2852738Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error-codes.c -o error-codes.o 2021-05-16T17:42:11.5466309Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c posix.c -o posix.o 2021-05-16T17:42:11.7442185Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-posix.c -o api-posix.o 2021-05-16T17:42:11.8414767Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c linux.c -o linux.o 2021-05-16T17:42:11.9631038Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-linux.c -o api-linux.o 2021-05-16T17:42:12.3789567Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o ps.so init.o api-common.o common.o extra.o dummy.o error-codes.o posix.o api-posix.o linux.o api-linux.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:42:12.4056147Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-ps/00new/ps 2021-05-16T17:42:12.4094193Z ** R 2021-05-16T17:42:12.4196999Z ** inst 2021-05-16T17:42:12.4206996Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:42:13.3504621Z ** help 2021-05-16T17:42:13.4820695Z *** installing help indices 2021-05-16T17:42:13.5669575Z ** building package indices 2021-05-16T17:42:13.8252934Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:42:13.9963239Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:42:14.0139774Z ** testing if installed package can be loaded from final location 2021-05-16T17:42:14.1977498Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:42:14.1989456Z * DONE (ps) 2021-05-16T17:42:14.3949027Z * installing *source* package ‘praise’ ... 2021-05-16T17:42:14.3957170Z ** package ‘praise’ successfully unpacked and MD5 sums checked 2021-05-16T17:42:14.3958185Z ** using staged installation 2021-05-16T17:42:14.4055591Z ** R 2021-05-16T17:42:14.4092343Z ** inst 2021-05-16T17:42:14.4100755Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:42:14.6254788Z ** help 2021-05-16T17:42:14.6338446Z *** installing help indices 2021-05-16T17:42:14.6545904Z ** building package indices 2021-05-16T17:42:14.8315999Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:42:14.9971268Z ** testing if installed package can be loaded from final location 2021-05-16T17:42:15.1596225Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:42:15.1601332Z * DONE (praise) 2021-05-16T17:42:15.4688715Z * installing *source* package ‘pkgload’ ... 2021-05-16T17:42:15.4738737Z ** package ‘pkgload’ successfully unpacked and MD5 sums checked 2021-05-16T17:42:15.4741876Z ** using staged installation 2021-05-16T17:42:15.4880716Z ** R 2021-05-16T17:42:15.4979227Z ** inst 2021-05-16T17:42:15.4988051Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:42:16.2756843Z ** help 2021-05-16T17:42:16.3268218Z *** installing help indices 2021-05-16T17:42:16.3689941Z ** building package indices 2021-05-16T17:42:16.5813769Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:42:17.0163196Z ** testing if installed package can be loaded from final location 2021-05-16T17:42:17.4602797Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:42:17.4615330Z * DONE (pkgload) 2021-05-16T17:42:17.6914143Z * installing *source* package ‘evaluate’ ... 2021-05-16T17:42:17.6931135Z ** package ‘evaluate’ successfully unpacked and MD5 sums checked 2021-05-16T17:42:17.6933425Z ** using staged installation 2021-05-16T17:42:17.7063497Z ** R 2021-05-16T17:42:17.7111686Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:42:18.1655979Z ** help 2021-05-16T17:42:18.1931632Z *** installing help indices 2021-05-16T17:42:18.2236270Z ** building package indices 2021-05-16T17:42:18.4147491Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:42:18.5807705Z ** testing if installed package can be loaded from final location 2021-05-16T17:42:18.7528820Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:42:18.7536975Z * DONE (evaluate) 2021-05-16T17:42:18.9548125Z * installing *source* package ‘ellipsis’ ... 2021-05-16T17:42:18.9557493Z ** package ‘ellipsis’ successfully unpacked and MD5 sums checked 2021-05-16T17:42:18.9558568Z ** using staged installation 2021-05-16T17:42:18.9694104Z ** libs 2021-05-16T17:42:18.9743136Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dots.c -o dots.o 2021-05-16T17:42:19.0438017Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:42:19.0870388Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o ellipsis.so dots.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:42:19.1078960Z installing to /home/runner/work/_temp/Library/00LOCK-ellipsis/00new/ellipsis/libs 2021-05-16T17:42:19.1092808Z ** R 2021-05-16T17:42:19.1124225Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:42:19.3610773Z ** help 2021-05-16T17:42:19.3853424Z *** installing help indices 2021-05-16T17:42:19.4040720Z ** building package indices 2021-05-16T17:42:19.5903371Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:42:19.7771181Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:42:19.7942173Z ** testing if installed package can be loaded from final location 2021-05-16T17:42:19.9753238Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:42:19.9759152Z * DONE (ellipsis) 2021-05-16T17:42:20.2294375Z * installing *source* package ‘digest’ ... 2021-05-16T17:42:20.2324026Z ** package ‘digest’ successfully unpacked and MD5 sums checked 2021-05-16T17:42:20.2325178Z ** using staged installation 2021-05-16T17:42:20.2427482Z ** libs 2021-05-16T17:42:20.2481005Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c SpookyV2.cpp -o SpookyV2.o 2021-05-16T17:42:20.4138219Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o 2021-05-16T17:42:20.7103360Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3.c -o blake3.o 2021-05-16T17:42:21.2129789Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3_dispatch.c -o blake3_dispatch.o 2021-05-16T17:42:21.4318216Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3_portable.c -o blake3_portable.o 2021-05-16T17:42:21.9455450Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c crc32.c -o crc32.o 2021-05-16T17:42:22.0171174Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest.c -o digest.o 2021-05-16T17:42:22.2198499Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest2int.c -o digest2int.o 2021-05-16T17:42:22.2741100Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:42:22.2961091Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c md5.c -o md5.o 2021-05-16T17:42:22.4298735Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pmurhash.c -o pmurhash.o 2021-05-16T17:42:22.4787308Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c raes.c -o raes.o 2021-05-16T17:42:22.5458922Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha1.c -o sha1.o 2021-05-16T17:42:22.8275017Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha2.c -o sha2.o 2021-05-16T17:42:22.9341336Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha256.c -o sha256.o 2021-05-16T17:42:23.4730326Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c spooky_serialize.cpp -o spooky_serialize.o 2021-05-16T17:42:23.5821835Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c xxhash.c -o xxhash.o 2021-05-16T17:42:23.8180832Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o digest.so SpookyV2.o aes.o blake3.o blake3_dispatch.o blake3_portable.o crc32.o digest.o digest2int.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o spooky_serialize.o xxhash.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:42:23.8573559Z installing to /home/runner/work/_temp/Library/00LOCK-digest/00new/digest/libs 2021-05-16T17:42:23.8594299Z ** R 2021-05-16T17:42:23.8651114Z ** demo 2021-05-16T17:42:23.8656609Z ** inst 2021-05-16T17:42:23.8673061Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:42:24.3595843Z ** help 2021-05-16T17:42:24.3962258Z *** installing help indices 2021-05-16T17:42:24.4214415Z ** building package indices 2021-05-16T17:42:24.6121170Z ** installing vignettes 2021-05-16T17:42:24.6177802Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:42:24.7894105Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:42:24.8074966Z ** testing if installed package can be loaded from final location 2021-05-16T17:42:24.9803524Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:42:24.9814350Z * DONE (digest) 2021-05-16T17:42:25.1919802Z * installing *source* package ‘brio’ ... 2021-05-16T17:42:25.1932515Z ** package ‘brio’ successfully unpacked and MD5 sums checked 2021-05-16T17:42:25.1933605Z ** using staged installation 2021-05-16T17:42:25.2105393Z ** libs 2021-05-16T17:42:25.2153866Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c brio.c -o brio.o 2021-05-16T17:42:25.2518084Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c file_line_endings.c -o file_line_endings.o 2021-05-16T17:42:25.2978907Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:42:25.3389824Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_file.c -o read_file.o 2021-05-16T17:42:25.3875524Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_file_raw.c -o read_file_raw.o 2021-05-16T17:42:25.4370254Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_lines.c -o read_lines.o 2021-05-16T17:42:25.5134806Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write_file.c -o write_file.o 2021-05-16T17:42:25.5581712Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write_lines.c -o write_lines.o 2021-05-16T17:42:25.6117455Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o brio.so brio.o file_line_endings.o init.o read_file.o read_file_raw.o read_lines.o write_file.o write_lines.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:42:25.6343403Z installing to /home/runner/work/_temp/Library/00LOCK-brio/00new/brio/libs 2021-05-16T17:42:25.6356656Z ** R 2021-05-16T17:42:25.6388757Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:42:25.8575572Z ** help 2021-05-16T17:42:25.8768185Z *** installing help indices 2021-05-16T17:42:25.8959539Z ** building package indices 2021-05-16T17:42:26.0812103Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:42:26.2498660Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:42:26.2669760Z ** testing if installed package can be loaded from final location 2021-05-16T17:42:26.4347799Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:42:26.4349232Z * DONE (brio) 2021-05-16T17:42:26.7071912Z * installing *source* package ‘xml2’ ... 2021-05-16T17:42:26.7109138Z ** package ‘xml2’ successfully unpacked and MD5 sums checked 2021-05-16T17:42:26.7110309Z ** using staged installation 2021-05-16T17:42:26.7192717Z Found pkg-config cflags and libs! 2021-05-16T17:42:26.8008193Z Using PKG_CFLAGS=-I/usr/include/libxml2 2021-05-16T17:42:26.8009195Z Using PKG_LIBS=-lxml2 2021-05-16T17:42:26.8495798Z ** libs 2021-05-16T17:42:26.8542983Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c connection.cpp -o connection.o 2021-05-16T17:42:27.3165425Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:42:27.3604320Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_doc.cpp -o xml2_doc.o 2021-05-16T17:42:27.8723001Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_init.cpp -o xml2_init.o 2021-05-16T17:42:28.2681675Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_namespace.cpp -o xml2_namespace.o 2021-05-16T17:42:28.9236662Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_node.cpp -o xml2_node.o 2021-05-16T17:42:30.6438618Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_output.cpp -o xml2_output.o 2021-05-16T17:42:31.1482483Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_schema.cpp -o xml2_schema.o 2021-05-16T17:42:31.6833993Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_url.cpp -o xml2_url.o 2021-05-16T17:42:32.1193524Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_xpath.cpp -o xml2_xpath.o 2021-05-16T17:42:32.5199370Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o xml2.so connection.o init.o xml2_doc.o xml2_init.o xml2_namespace.o xml2_node.o xml2_output.o xml2_schema.o xml2_url.o xml2_xpath.o -lxml2 -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:42:32.6090222Z installing to /home/runner/work/_temp/Library/00LOCK-xml2/00new/xml2/libs 2021-05-16T17:42:32.6091620Z ** R 2021-05-16T17:42:32.6164695Z ** inst 2021-05-16T17:42:32.6177545Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:42:33.4639706Z ** help 2021-05-16T17:42:33.5534934Z *** installing help indices 2021-05-16T17:42:33.6006196Z ** building package indices 2021-05-16T17:42:33.8178706Z ** installing vignettes 2021-05-16T17:42:33.8283370Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:42:34.0090983Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:42:34.0280474Z ** testing if installed package can be loaded from final location 2021-05-16T17:42:34.2198244Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:42:34.2213944Z * DONE (xml2) 2021-05-16T17:42:34.4845619Z * installing *source* package ‘xfun’ ... 2021-05-16T17:42:34.4879274Z ** package ‘xfun’ successfully unpacked and MD5 sums checked 2021-05-16T17:42:34.4880070Z ** using staged installation 2021-05-16T17:42:34.5024370Z ** libs 2021-05-16T17:42:34.5098964Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T17:42:34.6056087Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:42:34.6484429Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o xfun.so base64.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:42:34.6812829Z installing to /home/runner/work/_temp/Library/00LOCK-xfun/00new/xfun/libs 2021-05-16T17:42:34.6825990Z ** R 2021-05-16T17:42:34.6964295Z ** inst 2021-05-16T17:42:34.6976582Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:42:35.9278226Z ** help 2021-05-16T17:42:36.0658690Z *** installing help indices 2021-05-16T17:42:36.1591352Z ** building package indices 2021-05-16T17:42:36.4216977Z ** installing vignettes 2021-05-16T17:42:36.4280508Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:42:36.5995303Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:42:36.6167735Z ** testing if installed package can be loaded from final location 2021-05-16T17:42:36.8061382Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:42:36.8075843Z * DONE (xfun) 2021-05-16T17:42:39.1487876Z * installing *source* package ‘stringi’ ... 2021-05-16T17:42:39.2581046Z ** package ‘stringi’ successfully unpacked and MD5 sums checked 2021-05-16T17:42:39.2581838Z ** using staged installation 2021-05-16T17:42:39.3723946Z checking for R_HOME... /opt/R/devel/lib/R 2021-05-16T17:42:39.3725096Z checking for R... /opt/R/devel/lib/R/bin/R 2021-05-16T17:42:39.5273328Z checking for endianness... little 2021-05-16T17:42:39.6785939Z checking for R >= 3.1.0 for C++11 use... yes 2021-05-16T17:42:39.8288330Z checking for R < 3.4.0 for CXX1X flag use... no 2021-05-16T17:42:39.8292779Z checking for cat... /usr/bin/cat 2021-05-16T17:42:40.0424581Z checking for local ICUDT_DIR... icu69/data 2021-05-16T17:42:40.0425622Z checking for gcc... gcc 2021-05-16T17:42:40.1088341Z checking whether the C compiler works... yes 2021-05-16T17:42:40.1089468Z checking for C compiler default output file name... a.out 2021-05-16T17:42:40.1480615Z checking for suffix of executables... 2021-05-16T17:42:40.1905024Z checking whether we are cross compiling... no 2021-05-16T17:42:40.2124791Z checking for suffix of object files... o 2021-05-16T17:42:40.2322087Z checking whether we are using the GNU C compiler... yes 2021-05-16T17:42:40.2517216Z checking whether gcc accepts -g... yes 2021-05-16T17:42:40.2855276Z checking for gcc option to accept ISO C89... none needed 2021-05-16T17:42:40.3049792Z checking how to run the C preprocessor... gcc -E 2021-05-16T17:42:40.3259091Z checking for grep that handles long lines and -e... /usr/bin/grep 2021-05-16T17:42:40.3274537Z checking for egrep... /usr/bin/grep -E 2021-05-16T17:42:40.4259145Z checking for ANSI C header files... yes 2021-05-16T17:42:40.4527144Z checking for sys/types.h... yes 2021-05-16T17:42:40.4832883Z checking for sys/stat.h... yes 2021-05-16T17:42:40.5143333Z checking for stdlib.h... yes 2021-05-16T17:42:40.5474120Z checking for string.h... yes 2021-05-16T17:42:40.5796506Z checking for memory.h... yes 2021-05-16T17:42:40.6116396Z checking for strings.h... yes 2021-05-16T17:42:40.6441371Z checking for inttypes.h... yes 2021-05-16T17:42:40.6765327Z checking for stdint.h... yes 2021-05-16T17:42:40.7126406Z checking for unistd.h... yes 2021-05-16T17:42:40.7495420Z checking elf.h usability... yes 2021-05-16T17:42:40.7594295Z checking elf.h presence... yes 2021-05-16T17:42:40.7595370Z checking for elf.h... yes 2021-05-16T17:42:40.8006378Z checking whether we are using the GNU C++ compiler... yes 2021-05-16T17:42:40.8209320Z checking whether g++ -std=gnu++11 accepts -g... yes 2021-05-16T17:42:41.1188940Z checking whether the C++ compiler supports the long long type... yes 2021-05-16T17:42:41.1425572Z checking whether the compiler implements namespaces... yes 2021-05-16T17:42:41.2664195Z checking whether the compiler supports Standard Template Library... yes 2021-05-16T17:42:41.7545465Z checking whether std::map is available... yes 2021-05-16T17:42:41.7566616Z checking for pkg-config... /usr/bin/pkg-config 2021-05-16T17:42:41.7617558Z checking with pkg-config for the system ICU4C... 66.1 2021-05-16T17:42:41.7642521Z checking for ICU4C >= 55... yes 2021-05-16T17:42:41.7705237Z checking for additional required CPPFLAGS, LDFLAGS, and LIBS... done 2021-05-16T17:42:42.0414359Z checking whether an ICU4C-based project can be built... yes 2021-05-16T17:42:42.0976855Z checking programmatically for sufficient U_ICU_VERSION_MAJOR_NUM... yes 2021-05-16T17:42:42.3587624Z checking programmatically if U_CHARSET_IS_UTF8 is defined and set... yes 2021-05-16T17:42:42.9397003Z checking the capabilities of the ICU data library (ucnv, uloc, utrans)... yes 2021-05-16T17:42:43.5005170Z checking the capabilities of the ICU data library (ucol)... yes 2021-05-16T17:42:43.5340167Z configure: creating ./config.status 2021-05-16T17:42:43.6103074Z config.status: creating src/Makevars 2021-05-16T17:42:43.6263216Z config.status: creating src/uconfig_local.h 2021-05-16T17:42:43.6436076Z config.status: creating src/install.libs.R 2021-05-16T17:42:43.6593173Z 2021-05-16T17:42:43.6593781Z *** stringi configure summary: 2021-05-16T17:42:43.6594256Z ICU_FOUND=1 2021-05-16T17:42:43.6594703Z STRINGI_CXXSTD=CXX_STD=CXX11 2021-05-16T17:42:43.6595720Z STRINGI_CFLAGS= -fpic 2021-05-16T17:42:43.6596498Z STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H 2021-05-16T17:42:43.6597209Z STRINGI_CXXFLAGS= -fpic 2021-05-16T17:42:43.6597929Z STRINGI_LDFLAGS=-L/usr/lib/x86_64-linux-gnu 2021-05-16T17:42:43.6598683Z STRINGI_LIBS=-licui18n -licuuc -licudata 2021-05-16T17:42:43.6599029Z 2021-05-16T17:42:43.6599441Z *** Compiler settings used: 2021-05-16T17:42:43.6599831Z CC=gcc 2021-05-16T17:42:43.6600326Z LD=g++ -std=gnu++14 2021-05-16T17:42:43.6600852Z CFLAGS=-g -O2 -fpic 2021-05-16T17:42:43.6601561Z CPPFLAGS=-I/usr/local/include -UDEBUG -DNDEBUG 2021-05-16T17:42:43.6602186Z CXX=g++ -std=gnu++11 2021-05-16T17:42:43.6602746Z CXXFLAGS=-g -O2 -fpic 2021-05-16T17:42:43.6603139Z LDFLAGS= 2021-05-16T17:42:43.6603490Z LIBS= 2021-05-16T17:42:43.6603716Z 2021-05-16T17:42:43.6938669Z ** libs 2021-05-16T17:42:43.7024036Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_brkiter.cpp -o stri_brkiter.o 2021-05-16T17:42:44.3209567Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_collator.cpp -o stri_collator.o 2021-05-16T17:42:44.9131456Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_common.cpp -o stri_common.o 2021-05-16T17:42:45.5323957Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_compare.cpp -o stri_compare.o 2021-05-16T17:42:46.2190073Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_base.cpp -o stri_container_base.o 2021-05-16T17:42:46.6990036Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o 2021-05-16T17:42:47.4938117Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listint.cpp -o stri_container_listint.o 2021-05-16T17:42:48.0171167Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listraw.cpp -o stri_container_listraw.o 2021-05-16T17:42:48.5680177Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listutf8.cpp -o stri_container_listutf8.o 2021-05-16T17:42:49.0910714Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_regex.cpp -o stri_container_regex.o 2021-05-16T17:42:49.7010291Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_usearch.cpp -o stri_container_usearch.o 2021-05-16T17:42:50.3092304Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf16.cpp -o stri_container_utf16.o 2021-05-16T17:42:50.9965295Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8.cpp -o stri_container_utf8.o 2021-05-16T17:42:51.6272092Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o 2021-05-16T17:42:52.1999140Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o 2021-05-16T17:42:53.0977256Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_detection.cpp -o stri_encoding_detection.o 2021-05-16T17:42:54.5942370Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_management.cpp -o stri_encoding_management.o 2021-05-16T17:42:55.2374269Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_escape.cpp -o stri_escape.o 2021-05-16T17:42:55.8674441Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_exception.cpp -o stri_exception.o 2021-05-16T17:42:56.3653033Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ICU_settings.cpp -o stri_ICU_settings.o 2021-05-16T17:42:56.8598103Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_join.cpp -o stri_join.o 2021-05-16T17:42:57.7395422Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_length.cpp -o stri_length.o 2021-05-16T17:42:58.3758848Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_pad.cpp -o stri_pad.o 2021-05-16T17:42:58.9719463Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_prepare_arg.cpp -o stri_prepare_arg.o 2021-05-16T17:42:59.7075836Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_random.cpp -o stri_random.o 2021-05-16T17:43:00.4422397Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_reverse.cpp -o stri_reverse.o 2021-05-16T17:43:00.9890460Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_count.cpp -o stri_search_class_count.o 2021-05-16T17:43:01.5923329Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_detect.cpp -o stri_search_class_detect.o 2021-05-16T17:43:02.2019727Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_extract.cpp -o stri_search_class_extract.o 2021-05-16T17:43:03.0180957Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_locate.cpp -o stri_search_class_locate.o 2021-05-16T17:43:03.8153752Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_replace.cpp -o stri_search_class_replace.o 2021-05-16T17:43:04.7593648Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_split.cpp -o stri_search_class_split.o 2021-05-16T17:43:05.5314091Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o 2021-05-16T17:43:06.2207665Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_subset.cpp -o stri_search_class_subset.o 2021-05-16T17:43:06.9437434Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_trim.cpp -o stri_search_class_trim.o 2021-05-16T17:43:07.5669720Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_common.cpp -o stri_search_common.o 2021-05-16T17:43:08.1790850Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_count.cpp -o stri_search_coll_count.o 2021-05-16T17:43:08.7845133Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o 2021-05-16T17:43:09.4158169Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o 2021-05-16T17:43:10.2061032Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o 2021-05-16T17:43:10.9718296Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o 2021-05-16T17:43:11.8063247Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_split.cpp -o stri_search_coll_split.o 2021-05-16T17:43:12.6042407Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o 2021-05-16T17:43:13.3010295Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o 2021-05-16T17:43:14.0134932Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o 2021-05-16T17:43:14.5370145Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o 2021-05-16T17:43:15.2099298Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o 2021-05-16T17:43:15.8791318Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o 2021-05-16T17:43:16.5481624Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o 2021-05-16T17:43:17.0958251Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o 2021-05-16T17:43:17.6364382Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o 2021-05-16T17:43:18.3497737Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o 2021-05-16T17:43:19.0563656Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o 2021-05-16T17:43:19.8378316Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o 2021-05-16T17:43:20.5732490Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o 2021-05-16T17:43:21.2841055Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o 2021-05-16T17:43:21.9221889Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_in.cpp -o stri_search_in.o 2021-05-16T17:43:21.9368599Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_other_split.cpp -o stri_search_other_split.o 2021-05-16T17:43:22.7230158Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_count.cpp -o stri_search_regex_count.o 2021-05-16T17:43:23.2672193Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o 2021-05-16T17:43:23.8215429Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o 2021-05-16T17:43:24.5711681Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o 2021-05-16T17:43:25.2937699Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_match.cpp -o stri_search_regex_match.o 2021-05-16T17:43:26.1691642Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o 2021-05-16T17:43:26.8168495Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_split.cpp -o stri_search_regex_split.o 2021-05-16T17:43:27.5699271Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o 2021-05-16T17:43:28.2049993Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sort.cpp -o stri_sort.o 2021-05-16T17:43:29.6863357Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stats.cpp -o stri_stats.o 2021-05-16T17:43:30.2909438Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stringi.cpp -o stri_stringi.o 2021-05-16T17:43:30.8387556Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sub.cpp -o stri_sub.o 2021-05-16T17:43:31.6170125Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_test.cpp -o stri_test.o 2021-05-16T17:43:32.1356978Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_zone.cpp -o stri_time_zone.o 2021-05-16T17:43:32.6912785Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_calendar.cpp -o stri_time_calendar.o 2021-05-16T17:43:33.4073397Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_symbols.cpp -o stri_time_symbols.o 2021-05-16T17:43:34.0677145Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_format.cpp -o stri_time_format.o 2021-05-16T17:43:34.7796823Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_casemap.cpp -o stri_trans_casemap.o 2021-05-16T17:43:35.4276546Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_other.cpp -o stri_trans_other.o 2021-05-16T17:43:36.1048264Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_normalization.cpp -o stri_trans_normalization.o 2021-05-16T17:43:36.6964336Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o 2021-05-16T17:43:37.2554811Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ucnv.cpp -o stri_ucnv.o 2021-05-16T17:43:37.8402985Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_uloc.cpp -o stri_uloc.o 2021-05-16T17:43:38.3385975Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_utils.cpp -o stri_utils.o 2021-05-16T17:43:38.8799291Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_wrap.cpp -o stri_wrap.o 2021-05-16T17:43:40.1517536Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o stringi.so stri_brkiter.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_stats.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:43:40.3475757Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-stringi/00new/stringi 2021-05-16T17:43:40.4243819Z ** R 2021-05-16T17:43:40.4526150Z ** inst 2021-05-16T17:43:40.4534684Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:43:41.4394687Z ** help 2021-05-16T17:43:41.8436377Z *** installing help indices 2021-05-16T17:43:42.0391615Z ** building package indices 2021-05-16T17:43:42.4049041Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:43:42.5803809Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:43:42.6018047Z ** testing if installed package can be loaded from final location 2021-05-16T17:43:42.7899654Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:43:42.7913466Z * DONE (stringi) 2021-05-16T17:43:43.6977237Z * installing *source* package ‘Rcpp’ ... 2021-05-16T17:43:43.7320172Z ** package ‘Rcpp’ successfully unpacked and MD5 sums checked 2021-05-16T17:43:43.7321389Z ** using staged installation 2021-05-16T17:43:43.7425059Z ** libs 2021-05-16T17:43:43.7476107Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c api.cpp -o api.o 2021-05-16T17:43:46.6088705Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c attributes.cpp -o attributes.o 2021-05-16T17:44:01.2616545Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c barrier.cpp -o barrier.o 2021-05-16T17:44:01.4512989Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c date.cpp -o date.o 2021-05-16T17:44:04.5891731Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c module.cpp -o module.o 2021-05-16T17:44:10.6069124Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c rcpp_init.cpp -o rcpp_init.o 2021-05-16T17:44:13.3707150Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o Rcpp.so api.o attributes.o barrier.o date.o module.o rcpp_init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:44:13.5320962Z installing to /home/runner/work/_temp/Library/00LOCK-Rcpp/00new/Rcpp/libs 2021-05-16T17:44:13.5433519Z ** R 2021-05-16T17:44:13.5565918Z ** inst 2021-05-16T17:44:13.5946868Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:44:15.1356100Z ** help 2021-05-16T17:44:15.2273159Z *** installing help indices 2021-05-16T17:44:15.2862911Z ** building package indices 2021-05-16T17:44:15.5174833Z ** installing vignettes 2021-05-16T17:44:15.5205538Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:44:15.7762714Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:44:15.7992462Z ** testing if installed package can be loaded from final location 2021-05-16T17:44:16.0793574Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:44:16.0874794Z * DONE (Rcpp) 2021-05-16T17:44:16.3631073Z * installing *source* package ‘commonmark’ ... 2021-05-16T17:44:16.3667540Z ** package ‘commonmark’ successfully unpacked and MD5 sums checked 2021-05-16T17:44:16.3668749Z ** using staged installation 2021-05-16T17:44:16.3777508Z ** libs 2021-05-16T17:44:16.3830716Z rm -f cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o extensions.o init.o wrapper.o commonmark.so cmark/libstatcmark.a 2021-05-16T17:44:16.3864779Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions.c -o extensions.o 2021-05-16T17:44:16.4309827Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:44:16.4680557Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c wrapper.c -o wrapper.o 2021-05-16T17:44:16.5279008Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/cmark.c -o cmark/cmark.o 2021-05-16T17:44:16.5725372Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/node.c -o cmark/node.o 2021-05-16T17:44:16.8339420Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/iterator.c -o cmark/iterator.o 2021-05-16T17:44:16.9164800Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/blocks.c -o cmark/blocks.o 2021-05-16T17:44:17.3301055Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/inlines.c -o cmark/inlines.o 2021-05-16T17:44:18.0074439Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/scanners.c -o cmark/scanners.o 2021-05-16T17:44:19.6220804Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/utf8.c -o cmark/utf8.o 2021-05-16T17:44:22.5296657Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/buffer.c -o cmark/buffer.o 2021-05-16T17:44:22.6477591Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/references.c -o cmark/references.o 2021-05-16T17:44:22.6917775Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/render.c -o cmark/render.o 2021-05-16T17:44:22.7840665Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/man.c -o cmark/man.o 2021-05-16T17:44:22.8632036Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/xml.c -o cmark/xml.o 2021-05-16T17:44:22.9403675Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/html.c -o cmark/html.o 2021-05-16T17:44:23.1176945Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/commonmark.c -o cmark/commonmark.o 2021-05-16T17:44:23.3020701Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/latex.c -o cmark/latex.o 2021-05-16T17:44:23.4199004Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_href_e.c -o cmark/houdini_href_e.o 2021-05-16T17:44:23.4612982Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_html_e.c -o cmark/houdini_html_e.o 2021-05-16T17:44:23.5018500Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_html_u.c -o cmark/houdini_html_u.o 2021-05-16T17:44:23.5994318Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/cmark_ctype.c -o cmark/cmark_ctype.o 2021-05-16T17:44:23.6272908Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/arena.c -o cmark/arena.o 2021-05-16T17:44:23.6837251Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/linked_list.c -o cmark/linked_list.o 2021-05-16T17:44:23.7225918Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/plugin.c -o cmark/plugin.o 2021-05-16T17:44:23.7583602Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/registry.c -o cmark/registry.o 2021-05-16T17:44:23.8034844Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/syntax_extension.c -o cmark/syntax_extension.o 2021-05-16T17:44:23.8650224Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/plaintext.c -o cmark/plaintext.o 2021-05-16T17:44:23.9560490Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/footnotes.c -o cmark/footnotes.o 2021-05-16T17:44:23.9974616Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/map.c -o cmark/map.o 2021-05-16T17:44:24.0665435Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/autolink.c -o extensions/autolink.o 2021-05-16T17:44:24.2268580Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/core-extensions.c -o extensions/core-extensions.o 2021-05-16T17:44:24.2573298Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/ext_scanners.c -o extensions/ext_scanners.o 2021-05-16T17:44:24.3858063Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/strikethrough.c -o extensions/strikethrough.o 2021-05-16T17:44:24.4604139Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/table.c -o extensions/table.o 2021-05-16T17:44:24.7137249Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/tagfilter.c -o extensions/tagfilter.o 2021-05-16T17:44:24.7637443Z ar rcs cmark/libstatcmark.a cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o 2021-05-16T17:44:24.7758691Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o commonmark.so extensions.o init.o wrapper.o -Lcmark -lstatcmark -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:44:24.8166456Z installing to /home/runner/work/_temp/Library/00LOCK-commonmark/00new/commonmark/libs 2021-05-16T17:44:24.8231064Z ** R 2021-05-16T17:44:24.8256513Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:44:25.0417759Z ** help 2021-05-16T17:44:25.0536511Z *** installing help indices 2021-05-16T17:44:25.0691645Z ** building package indices 2021-05-16T17:44:25.2487154Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:44:25.4186453Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:44:25.4376248Z ** testing if installed package can be loaded from final location 2021-05-16T17:44:25.6041368Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:44:25.6047308Z * DONE (commonmark) 2021-05-16T17:44:25.8380460Z * installing *source* package ‘brew’ ... 2021-05-16T17:44:25.8383308Z ** using staged installation 2021-05-16T17:44:25.8461182Z ** R 2021-05-16T17:44:25.8488347Z ** inst 2021-05-16T17:44:25.8514909Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:44:26.1732673Z ** help 2021-05-16T17:44:26.1874319Z *** installing help indices 2021-05-16T17:44:26.2035397Z ** building package indices 2021-05-16T17:44:26.3825745Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:44:26.5482386Z ** testing if installed package can be loaded from final location 2021-05-16T17:44:26.7143640Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:44:26.7152040Z * DONE (brew) 2021-05-16T17:44:26.9260485Z * installing *source* package ‘sessioninfo’ ... 2021-05-16T17:44:26.9278553Z ** package ‘sessioninfo’ successfully unpacked and MD5 sums checked 2021-05-16T17:44:26.9281729Z ** using staged installation 2021-05-16T17:44:26.9445219Z ** R 2021-05-16T17:44:26.9484794Z ** inst 2021-05-16T17:44:26.9492584Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:44:27.3534782Z ** help 2021-05-16T17:44:27.3674654Z *** installing help indices 2021-05-16T17:44:27.3847465Z ** building package indices 2021-05-16T17:44:27.5674040Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:44:27.7816432Z ** testing if installed package can be loaded from final location 2021-05-16T17:44:27.9954522Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:44:27.9960181Z * DONE (sessioninfo) 2021-05-16T17:44:28.1981215Z * installing *source* package ‘prettyunits’ ... 2021-05-16T17:44:28.1995710Z ** package ‘prettyunits’ successfully unpacked and MD5 sums checked 2021-05-16T17:44:28.1998891Z ** using staged installation 2021-05-16T17:44:28.2110342Z ** R 2021-05-16T17:44:28.2150168Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:44:28.5054787Z ** help 2021-05-16T17:44:28.5311651Z *** installing help indices 2021-05-16T17:44:28.5503154Z ** building package indices 2021-05-16T17:44:28.7362863Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:44:28.9016378Z ** testing if installed package can be loaded from final location 2021-05-16T17:44:29.0662756Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:44:29.0668413Z * DONE (prettyunits) 2021-05-16T17:44:29.5681586Z * installing *source* package ‘vctrs’ ... 2021-05-16T17:44:29.5819472Z ** package ‘vctrs’ successfully unpacked and MD5 sums checked 2021-05-16T17:44:29.5820546Z ** using staged installation 2021-05-16T17:44:29.5986182Z ** libs 2021-05-16T17:44:29.6055918Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c altrep-rle.c -o altrep-rle.o 2021-05-16T17:44:29.7127917Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c arg-counter.c -o arg-counter.o 2021-05-16T17:44:29.7948034Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c arg.c -o arg.o 2021-05-16T17:44:29.8748278Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c bind.c -o bind.o 2021-05-16T17:44:30.1000637Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c c-unchop.c -o c-unchop.o 2021-05-16T17:44:30.2078767Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c c.c -o c.o 2021-05-16T17:44:30.3371526Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c callables.c -o callables.o 2021-05-16T17:44:30.3947627Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast-bare.c -o cast-bare.o 2021-05-16T17:44:30.4936956Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast-dispatch.c -o cast-dispatch.o 2021-05-16T17:44:30.5647769Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast.c -o cast.o 2021-05-16T17:44:30.6886956Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c compare.c -o compare.o 2021-05-16T17:44:30.8772175Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c complete.c -o complete.o 2021-05-16T17:44:30.9888027Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c conditions.c -o conditions.o 2021-05-16T17:44:31.0694628Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dictionary.c -o dictionary.o 2021-05-16T17:44:31.2996340Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dim.c -o dim.o 2021-05-16T17:44:31.3565531Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c equal.c -o equal.o 2021-05-16T17:44:31.7159582Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fields.c -o fields.o 2021-05-16T17:44:31.7994574Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fill.c -o fill.o 2021-05-16T17:44:31.9139766Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c group.c -o group.o 2021-05-16T17:44:32.0249300Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c growable.c -o growable.o 2021-05-16T17:44:32.0770756Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hash.c -o hash.o 2021-05-16T17:44:32.2918364Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:44:32.3480957Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c names.c -o names.o 2021-05-16T17:44:32.6418703Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-groups.c -o order-groups.o 2021-05-16T17:44:32.7093203Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-radix.c -o order-radix.o 2021-05-16T17:44:33.3735572Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-sortedness.c -o order-sortedness.o 2021-05-16T17:44:33.5153710Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-transform.c -o order-transform.o 2021-05-16T17:44:33.5813012Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-truelength.c -o order-truelength.o 2021-05-16T17:44:33.6487205Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c poly-op.c -o poly-op.o 2021-05-16T17:44:33.7957396Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c proxy-restore.c -o proxy-restore.o 2021-05-16T17:44:33.8962452Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c proxy.c -o proxy.o 2021-05-16T17:44:34.0130563Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ptype2-dispatch.c -o ptype2-dispatch.o 2021-05-16T17:44:34.1141837Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rep.c -o rep.o 2021-05-16T17:44:34.2371344Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c runs.c -o runs.o 2021-05-16T17:44:34.4646291Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c shape.c -o shape.o 2021-05-16T17:44:34.5552883Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size-common.c -o size-common.o 2021-05-16T17:44:34.6300109Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size.c -o size.o 2021-05-16T17:44:34.7328916Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-array.c -o slice-array.o 2021-05-16T17:44:35.1571790Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-assign-array.c -o slice-assign-array.o 2021-05-16T17:44:35.4863510Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-assign.c -o slice-assign.o 2021-05-16T17:44:35.7131246Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-chop.c -o slice-chop.o 2021-05-16T17:44:35.8686800Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice.c -o slice.o 2021-05-16T17:44:36.1249197Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c split.c -o split.o 2021-05-16T17:44:36.1762668Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c subscript-loc.c -o subscript-loc.o 2021-05-16T17:44:36.3581808Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c subscript.c -o subscript.o 2021-05-16T17:44:36.4938362Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c translate.c -o translate.o 2021-05-16T17:44:36.5934304Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-data-frame.c -o type-data-frame.o 2021-05-16T17:44:36.9189523Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-date-time.c -o type-date-time.o 2021-05-16T17:44:37.0628143Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-factor.c -o type-factor.o 2021-05-16T17:44:37.1855168Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-info.c -o type-info.o 2021-05-16T17:44:37.2812148Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-tibble.c -o type-tibble.o 2021-05-16T17:44:37.3490189Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type.c -o type.o 2021-05-16T17:44:37.4634607Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type2.c -o type2.o 2021-05-16T17:44:37.5838751Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typeof2-s3.c -o typeof2-s3.o 2021-05-16T17:44:37.6989288Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typeof2.c -o typeof2.o 2021-05-16T17:44:37.7924393Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c unspecified.c -o unspecified.o 2021-05-16T17:44:37.8603268Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils-dispatch.c -o utils-dispatch.o 2021-05-16T17:44:37.9267327Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils-rlang.c -o utils-rlang.o 2021-05-16T17:44:37.9764242Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T17:44:38.5649416Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-16T17:44:38.6027844Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o vctrs.so altrep-rle.o arg-counter.o arg.o bind.o c-unchop.o c.o callables.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o equal.o fields.o fill.o group.o growable.o hash.o init.o names.o order-groups.o order-radix.o order-sortedness.o order-transform.o order-truelength.o poly-op.o proxy-restore.o proxy.o ptype2-dispatch.o rep.o runs.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-tibble.o type.o type2.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils-rlang.o utils.o version.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:44:38.6575833Z installing to /home/runner/work/_temp/Library/00LOCK-vctrs/00new/vctrs/libs 2021-05-16T17:44:38.6608238Z ** R 2021-05-16T17:44:38.6937679Z ** inst 2021-05-16T17:44:38.6957181Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:44:41.1164584Z ** help 2021-05-16T17:44:41.3571206Z *** installing help indices 2021-05-16T17:44:41.5204760Z *** copying figures 2021-05-16T17:44:41.5214106Z ** building package indices 2021-05-16T17:44:41.8238522Z ** installing vignettes 2021-05-16T17:44:41.8418112Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:44:42.0600174Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:44:42.0791499Z ** testing if installed package can be loaded from final location 2021-05-16T17:44:42.3477507Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:44:42.3509895Z * DONE (vctrs) 2021-05-16T17:44:42.6249289Z * installing *source* package ‘processx’ ... 2021-05-16T17:44:42.6284602Z ** package ‘processx’ successfully unpacked and MD5 sums checked 2021-05-16T17:44:42.6285665Z ** using staged installation 2021-05-16T17:44:42.6448506Z ** libs 2021-05-16T17:44:42.6499525Z gcc -g -O2 -L/usr/local/lib -Wall tools/px.c -o tools/px 2021-05-16T17:44:42.7806379Z gcc -g -O2 -L/usr/local/lib supervisor/supervisor.c \ 2021-05-16T17:44:42.7807917Z supervisor/utils.c -o supervisor/supervisor 2021-05-16T17:44:42.9468249Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T17:44:43.0274923Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c client.c -o client.o 2021-05-16T17:44:43.1155897Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c errors.c -o errors.o 2021-05-16T17:44:43.1713704Z gcc -shared -L"/opt/R/devel/lib/R/lib" -L/usr/local/lib -o client.so base64.o client.o errors.o \ 2021-05-16T17:44:43.1715123Z -L"/opt/R/devel/lib/R/lib" -lR 2021-05-16T17:44:43.1927987Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:44:43.2587799Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c poll.c -o poll.o 2021-05-16T17:44:43.3532761Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c processx-connection.c -o processx-connection.o 2021-05-16T17:44:43.6717959Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c processx-vector.c -o processx-vector.o 2021-05-16T17:44:43.7567628Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c create-time.c -o create-time.o 2021-05-16T17:44:43.8620004Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/childlist.c -o unix/childlist.o 2021-05-16T17:44:43.9515234Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/connection.c -o unix/connection.o 2021-05-16T17:44:44.0231098Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/processx.c -o unix/processx.o 2021-05-16T17:44:44.3232900Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/sigchld.c -o unix/sigchld.o 2021-05-16T17:44:44.4157109Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/utils.c -o unix/utils.o 2021-05-16T17:44:44.5135573Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/named_pipe.c -o unix/named_pipe.o 2021-05-16T17:44:44.5658560Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cleancall.c -o cleancall.o 2021-05-16T17:44:44.6347806Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o processx.so init.o poll.o errors.o processx-connection.o processx-vector.o create-time.o base64.o unix/childlist.o unix/connection.o unix/processx.o unix/sigchld.o unix/utils.o unix/named_pipe.o cleancall.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:44:44.6616449Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-processx/00new/processx 2021-05-16T17:44:44.6655208Z ** R 2021-05-16T17:44:44.6785958Z ** inst 2021-05-16T17:44:44.6793283Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:44:46.1470502Z ** help 2021-05-16T17:44:46.2181533Z *** installing help indices 2021-05-16T17:44:46.2569241Z ** building package indices 2021-05-16T17:44:46.4697599Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:44:46.6529333Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:44:46.6784369Z ** testing if installed package can be loaded from final location 2021-05-16T17:44:46.8826672Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:44:46.8844291Z * DONE (processx) 2021-05-16T17:44:47.1303225Z * installing *source* package ‘markdown’ ... 2021-05-16T17:44:47.1327227Z ** package ‘markdown’ successfully unpacked and MD5 sums checked 2021-05-16T17:44:47.1328410Z ** using staged installation 2021-05-16T17:44:47.1469978Z ** libs 2021-05-16T17:44:47.1518797Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rbase64.c -o Rbase64.o 2021-05-16T17:44:47.2141091Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rinit.c -o Rinit.o 2021-05-16T17:44:47.2612248Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rmarkdown.c -o Rmarkdown.o 2021-05-16T17:44:47.4213328Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c autolink.c -o autolink.o 2021-05-16T17:44:47.5206434Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c buffer.c -o buffer.o 2021-05-16T17:44:47.5915906Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_href_e.c -o houdini_href_e.o 2021-05-16T17:44:47.6295149Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_html_e.c -o houdini_html_e.o 2021-05-16T17:44:47.6665005Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html.c -o html.o 2021-05-16T17:44:47.8672525Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html_smartypants.c -o html_smartypants.o 2021-05-16T17:44:47.9963582Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c markdown.c -o markdown.o 2021-05-16T17:44:49.0064164Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stack.c -o stack.o 2021-05-16T17:44:49.0520820Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o markdown.so Rbase64.o Rinit.o Rmarkdown.o autolink.o buffer.o houdini_href_e.o houdini_html_e.o html.o html_smartypants.o markdown.o stack.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:44:49.0775667Z installing to /home/runner/work/_temp/Library/00LOCK-markdown/00new/markdown/libs 2021-05-16T17:44:49.0790633Z ** R 2021-05-16T17:44:49.0843244Z ** inst 2021-05-16T17:44:49.0860622Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:44:49.4848118Z ** help 2021-05-16T17:44:49.5206530Z *** installing help indices 2021-05-16T17:44:49.5461398Z ** building package indices 2021-05-16T17:44:49.7372576Z ** installing vignettes 2021-05-16T17:44:49.7433097Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:44:49.9127569Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:44:49.9308096Z ** testing if installed package can be loaded from final location 2021-05-16T17:44:51.0177160Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:44:51.0178413Z * DONE (markdown) 2021-05-16T17:44:51.0179647Z * installing *source* package ‘highr’ ... 2021-05-16T17:44:51.0180548Z ** package ‘highr’ successfully unpacked and MD5 sums checked 2021-05-16T17:44:51.0181159Z ** using staged installation 2021-05-16T17:44:51.0181547Z ** R 2021-05-16T17:44:51.0181843Z ** inst 2021-05-16T17:44:51.0182543Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:44:51.0183026Z ** help 2021-05-16T17:44:51.0183445Z *** installing help indices 2021-05-16T17:44:51.0183921Z ** building package indices 2021-05-16T17:44:51.0184403Z ** installing vignettes 2021-05-16T17:44:51.0185091Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:44:51.0185877Z ** testing if installed package can be loaded from final location 2021-05-16T17:44:51.1853149Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:44:51.1860147Z * DONE (highr) 2021-05-16T17:44:51.4554314Z * installing *source* package ‘stringr’ ... 2021-05-16T17:44:51.4586102Z ** package ‘stringr’ successfully unpacked and MD5 sums checked 2021-05-16T17:44:51.4587243Z ** using staged installation 2021-05-16T17:44:51.4744410Z ** R 2021-05-16T17:44:51.4817955Z ** data 2021-05-16T17:44:51.4821645Z *** moving datasets to lazyload DB 2021-05-16T17:44:51.4985754Z ** inst 2021-05-16T17:44:51.4998932Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:44:51.9720192Z ** help 2021-05-16T17:44:52.0450953Z *** installing help indices 2021-05-16T17:44:52.0972317Z *** copying figures 2021-05-16T17:44:52.0974103Z ** building package indices 2021-05-16T17:44:52.3195505Z ** installing vignettes 2021-05-16T17:44:52.3253600Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:44:52.5036727Z ** testing if installed package can be loaded from final location 2021-05-16T17:44:52.6848232Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:44:52.6858091Z * DONE (stringr) 2021-05-16T17:44:52.8905760Z * installing *source* package ‘rversions’ ... 2021-05-16T17:44:52.8916418Z ** package ‘rversions’ successfully unpacked and MD5 sums checked 2021-05-16T17:44:52.8917489Z ** using staged installation 2021-05-16T17:44:52.9052253Z ** R 2021-05-16T17:44:52.9086604Z ** inst 2021-05-16T17:44:52.9094196Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:44:53.2139498Z ** help 2021-05-16T17:44:53.2322543Z *** installing help indices 2021-05-16T17:44:53.2518696Z *** copying figures 2021-05-16T17:44:53.2521733Z ** building package indices 2021-05-16T17:44:53.4388495Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:44:53.6293640Z ** testing if installed package can be loaded from final location 2021-05-16T17:44:53.8180677Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:44:53.8186292Z * DONE (rversions) 2021-05-16T17:44:54.2105680Z * installing *source* package ‘pillar’ ... 2021-05-16T17:44:54.2204471Z ** package ‘pillar’ successfully unpacked and MD5 sums checked 2021-05-16T17:44:54.2206925Z ** using staged installation 2021-05-16T17:44:54.2381732Z ** R 2021-05-16T17:44:54.2552038Z ** inst 2021-05-16T17:44:54.2585204Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:44:55.8333133Z ** help 2021-05-16T17:44:55.9133719Z *** installing help indices 2021-05-16T17:44:55.9711266Z *** copying figures 2021-05-16T17:44:55.9716290Z ** building package indices 2021-05-16T17:44:56.1938208Z ** installing vignettes 2021-05-16T17:44:56.2017832Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:44:56.4700441Z ** testing if installed package can be loaded from final location 2021-05-16T17:44:56.7684932Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:44:56.7707207Z * DONE (pillar) 2021-05-16T17:44:57.0204693Z * installing *source* package ‘callr’ ... 2021-05-16T17:44:57.0232277Z ** package ‘callr’ successfully unpacked and MD5 sums checked 2021-05-16T17:44:57.0233452Z ** using staged installation 2021-05-16T17:44:57.0363915Z ** R 2021-05-16T17:44:57.0490086Z ** inst 2021-05-16T17:44:57.0497156Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:44:59.8958478Z ** help 2021-05-16T17:45:00.0115762Z *** installing help indices 2021-05-16T17:45:00.0796129Z ** building package indices 2021-05-16T17:45:00.3182201Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:45:00.5084554Z ** testing if installed package can be loaded from final location 2021-05-16T17:45:00.7560634Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:45:00.7593497Z * DONE (callr) 2021-05-16T17:45:01.2005534Z * installing *source* package ‘knitr’ ... 2021-05-16T17:45:01.2112672Z ** package ‘knitr’ successfully unpacked and MD5 sums checked 2021-05-16T17:45:01.2113859Z ** using staged installation 2021-05-16T17:45:01.2441035Z ** R 2021-05-16T17:45:01.2816865Z ** demo 2021-05-16T17:45:01.2817214Z ** inst 2021-05-16T17:45:01.2907724Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:45:05.0614739Z ** help 2021-05-16T17:45:05.2414183Z *** installing help indices 2021-05-16T17:45:05.3547530Z ** building package indices 2021-05-16T17:45:05.6374887Z ** installing vignettes 2021-05-16T17:45:05.6463029Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:45:05.8347305Z ** testing if installed package can be loaded from final location 2021-05-16T17:45:06.1084759Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:45:06.1136594Z * DONE (knitr) 2021-05-16T17:45:06.3176280Z * installing *source* package ‘xopen’ ... 2021-05-16T17:45:06.3184327Z ** package ‘xopen’ successfully unpacked and MD5 sums checked 2021-05-16T17:45:06.3185376Z ** using staged installation 2021-05-16T17:45:06.3326301Z ** R 2021-05-16T17:45:06.3349934Z ** inst 2021-05-16T17:45:06.3357270Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:45:06.5694836Z ** help 2021-05-16T17:45:06.5806389Z *** installing help indices 2021-05-16T17:45:06.6020763Z ** building package indices 2021-05-16T17:45:06.7844548Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:45:06.9526475Z ** testing if installed package can be loaded from final location 2021-05-16T17:45:07.1195409Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:45:07.1201141Z * DONE (xopen) 2021-05-16T17:45:07.5161763Z * installing *source* package ‘tibble’ ... 2021-05-16T17:45:07.5255052Z ** package ‘tibble’ successfully unpacked and MD5 sums checked 2021-05-16T17:45:07.5256281Z ** using staged installation 2021-05-16T17:45:07.5451275Z ** libs 2021-05-16T17:45:07.5500206Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c attributes.c -o attributes.o 2021-05-16T17:45:07.5950951Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-05-16T17:45:07.6556794Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:45:07.6916716Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c matrixToDataFrame.c -o matrixToDataFrame.o 2021-05-16T17:45:07.7833239Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:45:07.8055668Z installing to /home/runner/work/_temp/Library/00LOCK-tibble/00new/tibble/libs 2021-05-16T17:45:07.8063170Z ** R 2021-05-16T17:45:07.8218565Z ** inst 2021-05-16T17:45:07.8247920Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:45:09.4676073Z ** help 2021-05-16T17:45:09.5385949Z *** installing help indices 2021-05-16T17:45:09.5850044Z *** copying figures 2021-05-16T17:45:09.5855019Z ** building package indices 2021-05-16T17:45:09.8016967Z ** installing vignettes 2021-05-16T17:45:09.8088505Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:45:10.1366991Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:45:10.1540870Z ** testing if installed package can be loaded from final location 2021-05-16T17:45:10.5039312Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:45:10.5059940Z * DONE (tibble) 2021-05-16T17:45:10.7459548Z * installing *source* package ‘pkgbuild’ ... 2021-05-16T17:45:10.7480341Z ** package ‘pkgbuild’ successfully unpacked and MD5 sums checked 2021-05-16T17:45:10.7481328Z ** using staged installation 2021-05-16T17:45:10.7621307Z ** R 2021-05-16T17:45:10.7697641Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:45:11.8583716Z ** help 2021-05-16T17:45:11.8929189Z *** installing help indices 2021-05-16T17:45:11.9265076Z ** building package indices 2021-05-16T17:45:12.1268529Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:45:12.3727021Z ** testing if installed package can be loaded from final location 2021-05-16T17:45:12.6292681Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:45:12.6306160Z * DONE (pkgbuild) 2021-05-16T17:45:12.9954519Z * installing *source* package ‘roxygen2’ ... 2021-05-16T17:45:13.0023482Z ** package ‘roxygen2’ successfully unpacked and MD5 sums checked 2021-05-16T17:45:13.0024536Z ** using staged installation 2021-05-16T17:45:13.0203340Z ** libs 2021-05-16T17:45:13.0256382Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-16T17:45:17.3179365Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c escapeExamples.cpp -o escapeExamples.o 2021-05-16T17:45:20.1269955Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c isComplete.cpp -o isComplete.o 2021-05-16T17:45:22.9471724Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c leadingSpaces.cpp -o leadingSpaces.o 2021-05-16T17:45:25.7925807Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c parser2.cpp -o parser2.o 2021-05-16T17:45:30.2731116Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c wrapUsage.cpp -o wrapUsage.o 2021-05-16T17:45:33.2344796Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o roxygen2.so RcppExports.o escapeExamples.o isComplete.o leadingSpaces.o parser2.o wrapUsage.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:45:33.3263702Z installing to /home/runner/work/_temp/Library/00LOCK-roxygen2/00new/roxygen2/libs 2021-05-16T17:45:33.3271509Z ** R 2021-05-16T17:45:33.3557005Z ** inst 2021-05-16T17:45:33.3574037Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:45:36.9447356Z ** help 2021-05-16T17:45:37.0130556Z *** installing help indices 2021-05-16T17:45:37.0621348Z *** copying figures 2021-05-16T17:45:37.0623382Z ** building package indices 2021-05-16T17:45:37.2788384Z ** installing vignettes 2021-05-16T17:45:37.2885955Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:45:37.6156967Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:45:37.6348144Z ** testing if installed package can be loaded from final location 2021-05-16T17:45:38.0239428Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:45:38.0275240Z * DONE (roxygen2) 2021-05-16T17:45:38.2360882Z * installing *source* package ‘rematch2’ ... 2021-05-16T17:45:38.2371244Z ** package ‘rematch2’ successfully unpacked and MD5 sums checked 2021-05-16T17:45:38.2372326Z ** using staged installation 2021-05-16T17:45:38.2500073Z ** R 2021-05-16T17:45:38.2540348Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:45:38.7031120Z ** help 2021-05-16T17:45:38.7318145Z *** installing help indices 2021-05-16T17:45:38.7521334Z ** building package indices 2021-05-16T17:45:38.9390226Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:45:39.2619787Z ** testing if installed package can be loaded from final location 2021-05-16T17:45:39.5851910Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:45:39.5854574Z * DONE (rematch2) 2021-05-16T17:45:39.8289583Z * installing *source* package ‘rcmdcheck’ ... 2021-05-16T17:45:39.8315061Z ** package ‘rcmdcheck’ successfully unpacked and MD5 sums checked 2021-05-16T17:45:39.8318296Z ** using staged installation 2021-05-16T17:45:39.8446113Z ** R 2021-05-16T17:45:39.8517490Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:45:40.9441228Z ** help 2021-05-16T17:45:40.9787278Z *** installing help indices 2021-05-16T17:45:41.0062714Z ** building package indices 2021-05-16T17:45:41.2034048Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:45:41.4678388Z ** testing if installed package can be loaded from final location 2021-05-16T17:45:41.7438223Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:45:41.7452774Z * DONE (rcmdcheck) 2021-05-16T17:45:41.9754364Z * installing *source* package ‘waldo’ ... 2021-05-16T17:45:41.9772988Z ** package ‘waldo’ successfully unpacked and MD5 sums checked 2021-05-16T17:45:41.9774322Z ** using staged installation 2021-05-16T17:45:41.9907726Z ** R 2021-05-16T17:45:41.9960813Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:45:42.6335582Z ** help 2021-05-16T17:45:42.6472986Z *** installing help indices 2021-05-16T17:45:42.6643517Z *** copying figures 2021-05-16T17:45:42.6645865Z ** building package indices 2021-05-16T17:45:42.8458035Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:45:43.0755094Z ** testing if installed package can be loaded from final location 2021-05-16T17:45:43.3045454Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:45:43.3054707Z * DONE (waldo) 2021-05-16T17:45:43.7766660Z * installing *source* package ‘testthat’ ... 2021-05-16T17:45:43.7884182Z ** package ‘testthat’ successfully unpacked and MD5 sums checked 2021-05-16T17:45:43.7886664Z ** using staged installation 2021-05-16T17:45:43.8093773Z ** libs 2021-05-16T17:45:43.8142369Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:45:43.8584080Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o 2021-05-16T17:45:43.9060608Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-catch.cpp -o test-catch.o 2021-05-16T17:45:44.6280353Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-example.cpp -o test-example.o 2021-05-16T17:45:45.1919875Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-runner.cpp -o test-runner.o 2021-05-16T17:46:00.8125964Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o testthat.so init.o reassign.o test-catch.o test-example.o test-runner.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:46:00.9696674Z installing to /home/runner/work/_temp/Library/00LOCK-testthat/00new/testthat/libs 2021-05-16T17:46:00.9799405Z ** R 2021-05-16T17:46:01.0136478Z ** inst 2021-05-16T17:46:01.0169152Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:46:09.9723302Z ** help 2021-05-16T17:46:10.1758660Z *** installing help indices 2021-05-16T17:46:10.3329468Z *** copying figures 2021-05-16T17:46:10.3334076Z ** building package indices 2021-05-16T17:46:10.6374816Z ** installing vignettes 2021-05-16T17:46:10.6489409Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:46:10.8473571Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:46:11.5397665Z ** testing if installed package can be loaded from final location 2021-05-16T17:46:11.5406103Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:46:11.5407014Z * DONE (testthat) 2021-05-16T17:46:11.6396102Z * installing *source* package ‘devtools’ ... 2021-05-16T17:46:11.6450065Z ** package ‘devtools’ successfully unpacked and MD5 sums checked 2021-05-16T17:46:11.6451339Z ** using staged installation 2021-05-16T17:46:11.6719483Z ** R 2021-05-16T17:46:11.6843673Z ** inst 2021-05-16T17:46:11.6852750Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:46:13.2875399Z ** help 2021-05-16T17:46:13.3936290Z *** installing help indices 2021-05-16T17:46:13.4629740Z *** copying figures 2021-05-16T17:46:13.4632202Z ** building package indices 2021-05-16T17:46:13.7054927Z ** installing vignettes 2021-05-16T17:46:13.7120213Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:46:14.3368763Z ** testing if installed package can be loaded from final location 2021-05-16T17:46:14.9856784Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:46:14.9877264Z * DONE (devtools) 2021-05-16T17:46:14.9991922Z 2021-05-16T17:46:14.9993053Z The downloaded source packages are in 2021-05-16T17:46:14.9994462Z ‘/tmp/Rtmp7Hky4l/downloaded_packages’ 2021-05-16T17:46:15.0953591Z Downloading GitHub repo muschellij2/desc@HEAD 2021-05-16T17:46:15.8340465Z 2021-05-16T17:46:16.1070702Z 2021-05-16T17:46:16.1072941Z checking for file ‘/tmp/Rtmp7Hky4l/remotes72be3e9c22b5/muschellij2-desc-7be86f2/DESCRIPTION’ ... 2021-05-16T17:46:16.1123282Z 2021-05-16T17:46:16.1124627Z ✔ checking for file ‘/tmp/Rtmp7Hky4l/remotes72be3e9c22b5/muschellij2-desc-7be86f2/DESCRIPTION’ 2021-05-16T17:46:16.1209460Z 2021-05-16T17:46:16.1209835Z 2021-05-16T17:46:16.1210548Z ─ preparing ‘desc’: 2021-05-16T17:46:16.1210830Z 2021-05-16T17:46:16.1211105Z 2021-05-16T17:46:16.1311594Z checking DESCRIPTION meta-information ... 2021-05-16T17:46:16.1329195Z 2021-05-16T17:46:16.1330541Z ✔ checking DESCRIPTION meta-information 2021-05-16T17:46:16.1957382Z 2021-05-16T17:46:16.1980474Z 2021-05-16T17:46:16.1982256Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-16T17:46:16.1989092Z 2021-05-16T17:46:16.2114090Z 2021-05-16T17:46:16.2115546Z ─ checking for empty or unneeded directories 2021-05-16T17:46:16.2121177Z 2021-05-16T17:46:16.2122878Z 2021-05-16T17:46:16.2124244Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-16T17:46:16.2141831Z ─ building ‘desc_1.2.0.9000.tar.gz’ 2021-05-16T17:46:16.3107932Z 2021-05-16T17:46:16.3109898Z 2021-05-16T17:46:16.3110847Z 2021-05-16T17:46:16.3215530Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T17:46:16.3216586Z (as ‘lib’ is unspecified) 2021-05-16T17:46:16.6041774Z * installing *source* package ‘desc’ ... 2021-05-16T17:46:16.6070744Z ** using staged installation 2021-05-16T17:46:16.6226363Z ** R 2021-05-16T17:46:16.6348724Z ** inst 2021-05-16T17:46:16.6363365Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:46:18.0543340Z ** help 2021-05-16T17:46:18.1766476Z *** installing help indices 2021-05-16T17:46:18.2594220Z ** building package indices 2021-05-16T17:46:18.5131272Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:46:18.6881141Z ** testing if installed package can be loaded from final location 2021-05-16T17:46:18.8914978Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:46:18.8931671Z * DONE (desc) 2021-05-16T17:46:19.0796862Z 2021-05-16T17:46:19.0797880Z 2021-05-16T17:46:19.0833648Z checking for file ‘/tmp/Rtmp7Hky4l/remotes72be2d88da4c/muschellij2-ghtravis-0b26809/DESCRIPTION’ ... 2021-05-16T17:46:19.0834467Z 2021-05-16T17:46:19.0835847Z ✔ checking for file ‘/tmp/Rtmp7Hky4l/remotes72be2d88da4c/muschellij2-ghtravis-0b26809/DESCRIPTION’ 2021-05-16T17:46:19.0929496Z 2021-05-16T17:46:19.0929905Z 2021-05-16T17:46:19.0930733Z ─ preparing ‘ghtravis’: 2021-05-16T17:46:19.0931033Z 2021-05-16T17:46:19.0931307Z 2021-05-16T17:46:19.1012597Z checking DESCRIPTION meta-information ... 2021-05-16T17:46:19.1032252Z 2021-05-16T17:46:19.1034202Z ✔ checking DESCRIPTION meta-information 2021-05-16T17:46:19.1385286Z 2021-05-16T17:46:19.1407361Z 2021-05-16T17:46:19.1410090Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-16T17:46:19.1418904Z 2021-05-16T17:46:19.1439483Z 2021-05-16T17:46:19.1441696Z ─ checking for empty or unneeded directories 2021-05-16T17:46:19.1444708Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-16T17:46:19.1525407Z 2021-05-16T17:46:19.1544668Z 2021-05-16T17:46:19.1546558Z ─ building ‘ghtravis_0.15.1.tar.gz’ 2021-05-16T17:46:19.1747141Z 2021-05-16T17:46:19.1749160Z 2021-05-16T17:46:19.1750431Z 2021-05-16T17:46:19.2045646Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T17:46:19.2047390Z (as ‘lib’ is unspecified) 2021-05-16T17:46:19.4295276Z * installing *source* package ‘ghtravis’ ... 2021-05-16T17:46:19.4296527Z ** using staged installation 2021-05-16T17:46:19.4436228Z ** R 2021-05-16T17:46:19.4516759Z ** inst 2021-05-16T17:46:19.4524813Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:46:20.5854809Z ** help 2021-05-16T17:46:20.6371139Z *** installing help indices 2021-05-16T17:46:20.6776714Z ** building package indices 2021-05-16T17:46:20.8935470Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:46:21.5200394Z ** testing if installed package can be loaded from final location 2021-05-16T17:46:22.1519283Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:46:22.1529944Z * DONE (ghtravis) 2021-05-16T17:46:22.1616111Z Using github PAT from envvar GITHUB_PAT 2021-05-16T17:46:22.3136421Z Downloading GitHub repo muschellij2/aghast@HEAD 2021-05-16T17:46:23.1451473Z 2021-05-16T17:46:23.1453225Z tidyselect (NA -> 1.1.1) [CRAN] 2021-05-16T17:46:23.1454320Z Installing 5 packages: tidyselect, generics, cpp11, dplyr, tidyr 2021-05-16T17:46:23.1455475Z generics (NA -> 0.1.0) [CRAN] 2021-05-16T17:46:23.1456199Z cpp11 (NA -> 0.2.7) [CRAN] 2021-05-16T17:46:23.1456879Z dplyr (NA -> 1.0.6) [CRAN] 2021-05-16T17:46:23.1457571Z tidyr (NA -> 1.1.3) [CRAN] 2021-05-16T17:46:23.1462615Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T17:46:23.1463466Z (as ‘lib’ is unspecified) 2021-05-16T17:46:36.6696949Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyselect_1.1.1.tar.gz' 2021-05-16T17:46:37.7967836Z Content type 'binary/octet-stream' length 92124 bytes (89 KB) 2021-05-16T17:46:37.9473538Z ================================================== 2021-05-16T17:46:37.9474138Z downloaded 89 KB 2021-05-16T17:46:37.9474450Z 2021-05-16T17:46:37.9575849Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/generics_0.1.0.tar.gz' 2021-05-16T17:46:39.1542940Z Content type 'binary/octet-stream' length 118869 bytes (116 KB) 2021-05-16T17:46:39.3621204Z ================================================== 2021-05-16T17:46:39.3624502Z downloaded 116 KB 2021-05-16T17:46:39.3625303Z 2021-05-16T17:46:39.3664080Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cpp11_0.2.7.tar.gz' 2021-05-16T17:46:40.5476173Z Content type 'binary/octet-stream' length 200157 bytes (195 KB) 2021-05-16T17:46:40.8827738Z ================================================== 2021-05-16T17:46:40.8828294Z downloaded 195 KB 2021-05-16T17:46:40.8828586Z 2021-05-16T17:46:40.8868913Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/dplyr_1.0.6.tar.gz' 2021-05-16T17:46:42.0983481Z Content type 'binary/octet-stream' length 954544 bytes (932 KB) 2021-05-16T17:46:42.5296826Z ================================================== 2021-05-16T17:46:42.5298863Z downloaded 932 KB 2021-05-16T17:46:42.5299971Z 2021-05-16T17:46:42.5333476Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyr_1.1.3.tar.gz' 2021-05-16T17:46:43.6617443Z Content type 'binary/octet-stream' length 706784 bytes (690 KB) 2021-05-16T17:46:44.2098965Z ================================================== 2021-05-16T17:46:44.2100151Z downloaded 690 KB 2021-05-16T17:46:44.2100968Z 2021-05-16T17:46:44.4634528Z * installing *source* package ‘tidyselect’ ... 2021-05-16T17:46:44.4663049Z ** package ‘tidyselect’ successfully unpacked and MD5 sums checked 2021-05-16T17:46:44.4664236Z ** using staged installation 2021-05-16T17:46:44.4813705Z ** R 2021-05-16T17:46:44.4895331Z ** inst 2021-05-16T17:46:44.4906648Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:46:45.3874575Z ** help 2021-05-16T17:46:45.4413492Z *** installing help indices 2021-05-16T17:46:45.4804999Z ** building package indices 2021-05-16T17:46:45.6811562Z ** installing vignettes 2021-05-16T17:46:45.6866611Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:46:45.9227222Z ** testing if installed package can be loaded from final location 2021-05-16T17:46:46.1708196Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:46:46.1719900Z * DONE (tidyselect) 2021-05-16T17:46:46.4311709Z * installing *source* package ‘generics’ ... 2021-05-16T17:46:46.4341032Z ** package ‘generics’ successfully unpacked and MD5 sums checked 2021-05-16T17:46:46.4342228Z ** using staged installation 2021-05-16T17:46:46.4465717Z ** R 2021-05-16T17:46:46.4516819Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:46:46.7352188Z ** help 2021-05-16T17:46:46.8463123Z *** installing help indices 2021-05-16T17:46:46.8881419Z ** building package indices 2021-05-16T17:46:47.1092734Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:46:47.2792815Z ** testing if installed package can be loaded from final location 2021-05-16T17:46:47.4478981Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:46:47.4494428Z * DONE (generics) 2021-05-16T17:46:47.7065275Z * installing *source* package ‘cpp11’ ... 2021-05-16T17:46:47.7103557Z ** package ‘cpp11’ successfully unpacked and MD5 sums checked 2021-05-16T17:46:47.7106470Z ** using staged installation 2021-05-16T17:46:47.7256457Z ** R 2021-05-16T17:46:47.7298130Z ** inst 2021-05-16T17:46:47.7327673Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:46:48.0979139Z ** help 2021-05-16T17:46:48.1179065Z *** installing help indices 2021-05-16T17:46:48.1354708Z ** building package indices 2021-05-16T17:46:48.3136603Z ** installing vignettes 2021-05-16T17:46:48.3187705Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:46:48.4839406Z ** testing if installed package can be loaded from final location 2021-05-16T17:46:48.6498689Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:46:48.6508407Z * DONE (cpp11) 2021-05-16T17:46:49.1202417Z * installing *source* package ‘dplyr’ ... 2021-05-16T17:46:49.1329503Z ** package ‘dplyr’ successfully unpacked and MD5 sums checked 2021-05-16T17:46:49.1332654Z ** using staged installation 2021-05-16T17:46:49.1544360Z ** libs 2021-05-16T17:46:49.1595912Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c chop.cpp -o chop.o 2021-05-16T17:46:49.2891945Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c filter.cpp -o filter.o 2021-05-16T17:46:49.4460797Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c funs.cpp -o funs.o 2021-05-16T17:46:49.5659450Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c group_by.cpp -o group_by.o 2021-05-16T17:46:50.0702498Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c group_data.cpp -o group_data.o 2021-05-16T17:46:50.1684443Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c imports.cpp -o imports.o 2021-05-16T17:46:50.2708929Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.cpp -o init.o 2021-05-16T17:46:50.3758115Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mask.cpp -o mask.o 2021-05-16T17:46:50.4983226Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mutate.cpp -o mutate.o 2021-05-16T17:46:50.6149379Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c slice.cpp -o slice.o 2021-05-16T17:46:50.7039256Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c summarise.cpp -o summarise.o 2021-05-16T17:46:50.8586890Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o dplyr.so chop.o filter.o funs.o group_by.o group_data.o imports.o init.o mask.o mutate.o slice.o summarise.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:46:50.9203617Z installing to /home/runner/work/_temp/Library/00LOCK-dplyr/00new/dplyr/libs 2021-05-16T17:46:50.9221302Z ** R 2021-05-16T17:46:50.9647025Z ** data 2021-05-16T17:46:50.9651737Z *** moving datasets to lazyload DB 2021-05-16T17:46:51.0567243Z ** inst 2021-05-16T17:46:51.0594192Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:46:55.2784754Z ** help 2021-05-16T17:46:55.7342654Z *** installing help indices 2021-05-16T17:46:55.9450693Z *** copying figures 2021-05-16T17:46:55.9456280Z ** building package indices 2021-05-16T17:46:56.2747105Z ** installing vignettes 2021-05-16T17:46:56.2873342Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:46:56.7203334Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:46:56.7378061Z ** testing if installed package can be loaded from final location 2021-05-16T17:46:57.2528334Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:46:57.2573399Z * DONE (dplyr) 2021-05-16T17:46:57.6045327Z * installing *source* package ‘tidyr’ ... 2021-05-16T17:46:57.6117401Z ** package ‘tidyr’ successfully unpacked and MD5 sums checked 2021-05-16T17:46:57.6118528Z ** using staged installation 2021-05-16T17:46:57.6293118Z ** libs 2021-05-16T17:46:57.6353319Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c cpp11.cpp -o cpp11.o 2021-05-16T17:46:58.5360480Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c fill.cpp -o fill.o 2021-05-16T17:46:58.8460836Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c melt.cpp -o melt.o 2021-05-16T17:47:00.4087125Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c simplifyPieces.cpp -o simplifyPieces.o 2021-05-16T17:47:01.6107772Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tidyr.so cpp11.o fill.o melt.o simplifyPieces.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:47:01.6855782Z installing to /home/runner/work/_temp/Library/00LOCK-tidyr/00new/tidyr/libs 2021-05-16T17:47:01.6879042Z ** R 2021-05-16T17:47:01.7029691Z ** data 2021-05-16T17:47:01.7040757Z *** moving datasets to lazyload DB 2021-05-16T17:47:01.8840207Z ** inst 2021-05-16T17:47:01.8861011Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:47:03.3829451Z ** help 2021-05-16T17:47:03.4949937Z *** installing help indices 2021-05-16T17:47:03.5657457Z *** copying figures 2021-05-16T17:47:03.5664037Z ** building package indices 2021-05-16T17:47:03.8064646Z ** installing vignettes 2021-05-16T17:47:03.8172709Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:47:04.2651069Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:47:04.2830255Z ** testing if installed package can be loaded from final location 2021-05-16T17:47:04.7477929Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:47:04.7495956Z * DONE (tidyr) 2021-05-16T17:47:04.7654531Z 2021-05-16T17:47:04.7655399Z The downloaded source packages are in 2021-05-16T17:47:04.7656627Z ‘/tmp/Rtmp7Hky4l/downloaded_packages’ 2021-05-16T17:47:04.9379838Z 2021-05-16T17:47:04.9392091Z checking for file ‘/tmp/Rtmp7Hky4l/remotes72be78b4e7c7/muschellij2-aghast-0c3b853/DESCRIPTION’ ... 2021-05-16T17:47:04.9410680Z 2021-05-16T17:47:04.9412433Z ✔ checking for file ‘/tmp/Rtmp7Hky4l/remotes72be78b4e7c7/muschellij2-aghast-0c3b853/DESCRIPTION’ 2021-05-16T17:47:04.9492233Z 2021-05-16T17:47:04.9492858Z 2021-05-16T17:47:04.9493753Z ─ preparing ‘aghast’: 2021-05-16T17:47:04.9494502Z 2021-05-16T17:47:04.9494959Z 2021-05-16T17:47:04.9568930Z checking DESCRIPTION meta-information ... 2021-05-16T17:47:04.9589836Z 2021-05-16T17:47:04.9591742Z ✔ checking DESCRIPTION meta-information 2021-05-16T17:47:04.9824945Z 2021-05-16T17:47:04.9847216Z 2021-05-16T17:47:04.9849559Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-16T17:47:04.9857121Z 2021-05-16T17:47:04.9877045Z 2021-05-16T17:47:04.9879134Z ─ checking for empty or unneeded directories 2021-05-16T17:47:04.9882255Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-16T17:47:04.9901986Z 2021-05-16T17:47:04.9921103Z 2021-05-16T17:47:04.9922823Z ─ building ‘aghast_0.2.1.tar.gz’ 2021-05-16T17:47:05.0007848Z 2021-05-16T17:47:05.0009770Z 2021-05-16T17:47:05.0011033Z 2021-05-16T17:47:05.0078690Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T17:47:05.0079648Z (as ‘lib’ is unspecified) 2021-05-16T17:47:05.2036285Z * installing *source* package ‘aghast’ ... 2021-05-16T17:47:05.2037762Z ** using staged installation 2021-05-16T17:47:05.2191008Z ** R 2021-05-16T17:47:05.2244059Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:47:05.6334650Z ** help 2021-05-16T17:47:05.6616838Z *** installing help indices 2021-05-16T17:47:05.6828968Z ** building package indices 2021-05-16T17:47:05.8728345Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:47:06.0418767Z ** testing if installed package can be loaded from final location 2021-05-16T17:47:06.2142229Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:47:06.2149256Z * DONE (aghast) 2021-05-16T17:47:06.2231217Z Installing 1 packages: covr 2021-05-16T17:47:06.2237321Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T17:47:06.2238217Z (as ‘lib’ is unspecified) 2021-05-16T17:47:19.5827839Z also installing the dependencies ‘lazyeval’, ‘rex’ 2021-05-16T17:47:19.5828350Z 2021-05-16T17:47:19.5831808Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lazyeval_0.2.2.tar.gz' 2021-05-16T17:47:20.8284913Z Content type 'application/x-tar' length 83462 bytes (81 KB) 2021-05-16T17:47:21.0081443Z ================================================== 2021-05-16T17:47:21.0083775Z downloaded 81 KB 2021-05-16T17:47:21.0084955Z 2021-05-16T17:47:21.0121900Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rex_1.2.0.tar.gz' 2021-05-16T17:47:22.1526518Z Content type 'binary/octet-stream' length 91701 bytes (89 KB) 2021-05-16T17:47:22.2868345Z ================================================== 2021-05-16T17:47:22.2869171Z downloaded 89 KB 2021-05-16T17:47:22.2869616Z 2021-05-16T17:47:22.2908761Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/covr_3.5.1.tar.gz' 2021-05-16T17:47:23.5335171Z Content type 'binary/octet-stream' length 147467 bytes (144 KB) 2021-05-16T17:47:23.6640375Z ================================================== 2021-05-16T17:47:23.6640878Z downloaded 144 KB 2021-05-16T17:47:23.6641191Z 2021-05-16T17:47:23.9129551Z * installing *source* package ‘lazyeval’ ... 2021-05-16T17:47:24.5610231Z ** package ‘lazyeval’ successfully unpacked and MD5 sums checked 2021-05-16T17:47:24.5610716Z 2021-05-16T17:47:24.5614113Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c expr.c -o expr.o 2021-05-16T17:47:24.5615922Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:47:24.5617239Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c interp.c -o interp.o 2021-05-16T17:47:24.5618539Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c lazy.c -o lazy.o 2021-05-16T17:47:24.5619796Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c name.c -o name.o 2021-05-16T17:47:24.5621052Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T17:47:24.5622551Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o lazyeval.so expr.o init.o interp.o lazy.o name.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:47:24.5624321Z ** using staged installation 2021-05-16T17:47:24.5624720Z ** libs 2021-05-16T17:47:24.5625616Z installing to /home/runner/work/_temp/Library/00LOCK-lazyeval/00new/lazyeval/libs 2021-05-16T17:47:24.5626170Z ** R 2021-05-16T17:47:24.5626480Z ** inst 2021-05-16T17:47:24.5627325Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:47:24.7692821Z ** help 2021-05-16T17:47:24.8223850Z *** installing help indices 2021-05-16T17:47:24.8649640Z ** building package indices 2021-05-16T17:47:25.0814591Z ** installing vignettes 2021-05-16T17:47:25.0872238Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:47:25.2564789Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:47:25.2736984Z ** testing if installed package can be loaded from final location 2021-05-16T17:47:25.4450202Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:47:25.4458375Z * DONE (lazyeval) 2021-05-16T17:47:25.6856039Z * installing *source* package ‘rex’ ... 2021-05-16T17:47:25.6879528Z ** package ‘rex’ successfully unpacked and MD5 sums checked 2021-05-16T17:47:25.6880692Z ** using staged installation 2021-05-16T17:47:25.7011227Z ** R 2021-05-16T17:47:25.7063298Z ** inst 2021-05-16T17:47:25.7074306Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:47:26.1774791Z ** help 2021-05-16T17:47:26.2232036Z *** installing help indices 2021-05-16T17:47:26.2588223Z ** building package indices 2021-05-16T17:47:26.4603709Z ** installing vignettes 2021-05-16T17:47:26.4692479Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:47:26.6352587Z ** testing if installed package can be loaded from final location 2021-05-16T17:47:26.8048184Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:47:26.8056506Z * DONE (rex) 2021-05-16T17:47:27.1381316Z * installing *source* package ‘covr’ ... 2021-05-16T17:47:27.1436354Z ** package ‘covr’ successfully unpacked and MD5 sums checked 2021-05-16T17:47:27.1438311Z ** using staged installation 2021-05-16T17:47:27.1639187Z ** libs 2021-05-16T17:47:27.1682845Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o 2021-05-16T17:47:27.2213038Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o covr.so reassign.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:47:27.2353556Z installing to /home/runner/work/_temp/Library/00LOCK-covr/00new/covr/libs 2021-05-16T17:47:27.2366268Z ** R 2021-05-16T17:47:27.2497115Z ** inst 2021-05-16T17:47:27.2518100Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:47:28.4267623Z ** help 2021-05-16T17:47:28.4854064Z *** installing help indices 2021-05-16T17:47:28.5308054Z *** copying figures 2021-05-16T17:47:28.5309642Z ** building package indices 2021-05-16T17:47:28.7454965Z ** installing vignettes 2021-05-16T17:47:28.7512836Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:47:28.9384754Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:47:28.9555989Z ** testing if installed package can be loaded from final location 2021-05-16T17:47:29.1655782Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:47:29.1656917Z * DONE (covr) 2021-05-16T17:47:29.1729104Z 2021-05-16T17:47:29.1730115Z The downloaded source packages are in 2021-05-16T17:47:29.1731391Z ‘/tmp/Rtmp7Hky4l/downloaded_packages’ 2021-05-16T17:47:29.1859845Z ##[group]Run Rscript -e "tic::before_install()" 2021-05-16T17:47:29.1860426Z Rscript -e "tic::before_install()" 2021-05-16T17:47:29.1903737Z shell: /usr/bin/bash -e {0} 2021-05-16T17:47:29.1904104Z env: 2021-05-16T17:47:29.1904691Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:47:29.1905119Z TIC_DEPLOY_KEY: 2021-05-16T17:47:29.1905866Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:47:29.1907580Z GITHUB_PAT: *** 2021-05-16T17:47:29.1907959Z COVERALLS_TOKEN: 2021-05-16T17:47:29.1908393Z continue-on-error: true 2021-05-16T17:47:29.1908831Z VDIFFR_RUN_TESTS: 2021-05-16T17:47:29.1909288Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:47:29.1909696Z TZ: UTC 2021-05-16T17:47:29.1910057Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:47:29.1910427Z NOT_CRAN: true 2021-05-16T17:47:29.1910769Z ##[endgroup] 2021-05-16T17:47:29.4465531Z ✔ Loading tic stage configuration from tic.R 2021-05-16T17:47:29.5685634Z Running before_install: step_install_remote_binaries() 2021-05-16T17:47:30.0512838Z Installing oro.nifti binaries 2021-05-16T17:47:30.0522601Z [1] "neuroconductor/oro.nifti" 2021-05-16T17:47:30.3243326Z OK (HTTP 200).OK (HTTP 200).No Binaries Found, exiting 2021-05-16T17:47:30.3365085Z ##[group]Run remotes::install_deps(dependencies = TRUE) 2021-05-16T17:47:30.3365779Z remotes::install_deps(dependencies = TRUE) 2021-05-16T17:47:30.3366416Z remotes::install_cran("rcmdcheck") 2021-05-16T17:47:30.3366940Z remotes::install_cran("markdown") 2021-05-16T17:47:30.3373618Z shell: /usr/local/bin/Rscript {0} 2021-05-16T17:47:30.3374239Z env: 2021-05-16T17:47:30.3374660Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:47:30.3375094Z TIC_DEPLOY_KEY: 2021-05-16T17:47:30.3375846Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:47:30.3377344Z GITHUB_PAT: *** 2021-05-16T17:47:30.3377727Z COVERALLS_TOKEN: 2021-05-16T17:47:30.3378162Z continue-on-error: true 2021-05-16T17:47:30.3378598Z VDIFFR_RUN_TESTS: 2021-05-16T17:47:30.3379055Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:47:30.3379825Z TZ: UTC 2021-05-16T17:47:30.3380193Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:47:30.3380608Z NOT_CRAN: true 2021-05-16T17:47:30.3380950Z ##[endgroup] 2021-05-16T17:47:50.5688196Z Downloading GitHub repo neuroconductor/oro.nifti@bd06b05d2a090c743e51d745a826e8b77af278f0 2021-05-16T17:47:50.5690039Z oro.nifti (NA -> bd06b05d2...) [GitHub] 2021-05-16T17:47:50.5690933Z later (NA -> 1.2.0 ) [CRAN] 2021-05-16T17:47:50.5691632Z promises (NA -> 1.2.0.1 ) [CRAN] 2021-05-16T17:47:50.5692392Z jquerylib (NA -> 0.1.4 ) [CRAN] 2021-05-16T17:47:50.5693081Z sass (NA -> 0.4.0 ) [CRAN] 2021-05-16T17:47:50.5693728Z bslib (NA -> 0.2.5 ) [CRAN] 2021-05-16T17:47:50.5694723Z sourcetools (NA -> 0.1.7 ) [CRAN] 2021-05-16T17:47:50.5695459Z xtable (NA -> 1.8-4 ) [CRAN] 2021-05-16T17:47:50.5696139Z httpuv (NA -> 1.6.1 ) [CRAN] 2021-05-16T17:47:50.5696810Z webshot (NA -> 0.5.2 ) [CRAN] 2021-05-16T17:47:50.5697512Z base64enc (NA -> 0.1-3 ) [CRAN] 2021-05-16T17:47:50.5698231Z htmlwidgets (NA -> 1.5.3 ) [CRAN] 2021-05-16T17:47:50.5698949Z htmltools (NA -> 0.5.1.1 ) [CRAN] 2021-05-16T17:47:50.5699636Z miniUI (NA -> 0.1.1.1 ) [CRAN] 2021-05-16T17:47:50.5700297Z shiny (NA -> 1.6.0 ) [CRAN] 2021-05-16T17:47:50.5700964Z RNifti (NA -> 1.3.1 ) [CRAN] 2021-05-16T17:47:50.5701622Z abind (NA -> 1.4-5 ) [CRAN] 2021-05-16T17:47:50.5702301Z bitops (NA -> 1.0-7 ) [CRAN] 2021-05-16T17:47:50.5703339Z manipulat... (NA -> 0.10.1 ) [CRAN] 2021-05-16T17:47:50.5704074Z crosstalk (NA -> 1.1.1 ) [CRAN] 2021-05-16T17:47:50.5704755Z servr (NA -> 0.22 ) [CRAN] 2021-05-16T17:47:50.5705438Z misc3d (NA -> 0.9-0 ) [CRAN] 2021-05-16T17:47:50.5706095Z rgl (NA -> 0.106.8 ) [CRAN] 2021-05-16T17:47:51.8009921Z RNifti (NA -> 929106d1b...) [GitHub] 2021-05-16T17:47:51.8011408Z base64enc (NA -> 0.1-3 ) [CRAN] 2021-05-16T17:47:51.8012417Z tinytex (NA -> 0.31 ) [CRAN] 2021-05-16T17:47:51.8013475Z htmltools (NA -> 0.5.1.1 ) [CRAN] 2021-05-16T17:47:51.8014603Z rmarkdown (NA -> 2.8 ) [CRAN] 2021-05-16T17:47:51.8015548Z rticles (NA -> 0.19 ) [CRAN] 2021-05-16T17:47:51.8016451Z abind (NA -> 1.4-5 ) [CRAN] 2021-05-16T17:47:51.8017389Z bitops (NA -> 1.0-7 ) [CRAN] 2021-05-16T17:47:51.9752212Z Downloading GitHub repo neuroconductor/RNifti@929106d1b17d6c09c8b001b5e39d448ed9ef635f 2021-05-16T17:47:53.2284608Z 2021-05-16T17:47:53.4175325Z 2021-05-16T17:47:53.4181803Z checking for file ‘/tmp/RtmpC0reNy/remotesd5451909af0c/neuroconductor-RNifti-929106d/DESCRIPTION’ ... 2021-05-16T17:47:53.4413077Z 2021-05-16T17:47:53.4416074Z ✔ checking for file ‘/tmp/RtmpC0reNy/remotesd5451909af0c/neuroconductor-RNifti-929106d/DESCRIPTION’ 2021-05-16T17:47:53.4435212Z 2021-05-16T17:47:53.4467304Z 2021-05-16T17:47:53.4469225Z ─ preparing ‘RNifti’: 2021-05-16T17:47:53.4478521Z checking DESCRIPTION meta-information ... 2021-05-16T17:47:53.4506384Z 2021-05-16T17:47:53.4508563Z ✔ checking DESCRIPTION meta-information 2021-05-16T17:47:53.4538491Z ─ cleaning src 2021-05-16T17:47:53.4546892Z 2021-05-16T17:47:53.4574441Z 2021-05-16T17:47:53.4576192Z ─ running ‘cleanup’ 2021-05-16T17:47:53.4986851Z 2021-05-16T17:47:53.5028618Z 2021-05-16T17:47:53.5030516Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-16T17:47:53.5375239Z 2021-05-16T17:47:53.5378827Z 2021-05-16T17:47:53.5382098Z ─ checking for empty or unneeded directories 2021-05-16T17:47:53.5399023Z 2021-05-16T17:47:53.5421007Z 2021-05-16T17:47:53.5422849Z ─ building ‘RNifti_1.3.1.tar.gz’ 2021-05-16T17:47:53.8327682Z 2021-05-16T17:47:53.8331733Z 2021-05-16T17:47:53.8334743Z 2021-05-16T17:47:53.8468509Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T17:47:53.8469308Z (as ‘lib’ is unspecified) 2021-05-16T17:47:54.1666285Z * installing *source* package ‘RNifti’ ... 2021-05-16T17:47:54.1668716Z ** using staged installation 2021-05-16T17:47:54.1828677Z ** libs 2021-05-16T17:47:54.1879649Z 2021-05-16T17:47:54.1881853Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c main.cpp -o main.o 2021-05-16T17:48:11.4419546Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zzz.c -o zzz.o 2021-05-16T17:48:11.5255375Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/adler32.c -o zlib/adler32.o 2021-05-16T17:48:11.6093129Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/compress.c -o zlib/compress.o 2021-05-16T17:48:11.6453123Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/crc32.c -o zlib/crc32.o 2021-05-16T17:48:11.7493366Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/deflate.c -o zlib/deflate.o 2021-05-16T17:48:12.1956795Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzclose.c -o zlib/gzclose.o 2021-05-16T17:48:12.2347930Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzlib.c -o zlib/gzlib.o 2021-05-16T17:48:12.3499524Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzread.c -o zlib/gzread.o 2021-05-16T17:48:12.4958105Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzwrite.c -o zlib/gzwrite.o 2021-05-16T17:48:12.6203448Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/infback.c -o zlib/infback.o 2021-05-16T17:48:12.8459867Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inffast.c -o zlib/inffast.o 2021-05-16T17:48:12.9521326Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inflate.c -o zlib/inflate.o 2021-05-16T17:48:13.4327202Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inftrees.c -o zlib/inftrees.o 2021-05-16T17:48:13.5236161Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/trees.c -o zlib/trees.o 2021-05-16T17:48:13.8155924Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/uncompr.c -o zlib/uncompr.o 2021-05-16T17:48:13.8500430Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/zutil.c -o zlib/zutil.o 2021-05-16T17:48:13.8926339Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c znzlib/znzlib.c -o znzlib/znzlib.o 2021-05-16T17:48:13.9656589Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c niftilib/nifti1_io.c -o niftilib/nifti1_io.o 2021-05-16T17:48:15.0295300Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c niftilib/nifti2_io.c -o niftilib/nifti2_io.o 2021-05-16T17:48:17.2358669Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o RNifti.so main.o zzz.o zlib/adler32.o zlib/compress.o zlib/crc32.o zlib/deflate.o zlib/gzclose.o zlib/gzlib.o zlib/gzread.o zlib/gzwrite.o zlib/infback.o zlib/inffast.o zlib/inflate.o zlib/inftrees.o zlib/trees.o zlib/uncompr.o zlib/zutil.o znzlib/znzlib.o niftilib/nifti1_io.o niftilib/nifti2_io.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:48:17.4132624Z installing to /home/runner/work/_temp/Library/00LOCK-RNifti/00new/RNifti/libs 2021-05-16T17:48:17.4255735Z ** R 2021-05-16T17:48:17.4331526Z ** inst 2021-05-16T17:48:17.4360138Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:48:18.1333997Z ** help 2021-05-16T17:48:18.1835167Z *** installing help indices 2021-05-16T17:48:18.2168032Z ** building package indices 2021-05-16T17:48:18.4196463Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:48:18.6728491Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:48:18.6956910Z ** testing if installed package can be loaded from final location 2021-05-16T17:48:18.9493374Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:48:18.9505677Z * DONE (RNifti) 2021-05-16T17:48:18.9662678Z Installing 7 packages: base64enc, tinytex, htmltools, rmarkdown, rticles, abind, bitops 2021-05-16T17:48:18.9670159Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T17:48:18.9671395Z (as ‘lib’ is unspecified) 2021-05-16T17:48:33.3458967Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/base64enc_0.1-3.tar.gz' 2021-05-16T17:48:34.3176769Z Content type 'application/x-tar' length 7843 bytes 2021-05-16T17:48:34.3178007Z ================================================== 2021-05-16T17:48:34.3178667Z downloaded 7843 bytes 2021-05-16T17:48:34.3179142Z 2021-05-16T17:48:34.3218078Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tinytex_0.31.tar.gz' 2021-05-16T17:48:35.2588457Z Content type 'binary/octet-stream' length 29350 bytes (28 KB) 2021-05-16T17:48:35.3401372Z ================================================== 2021-05-16T17:48:35.3402313Z downloaded 28 KB 2021-05-16T17:48:35.3402836Z 2021-05-16T17:48:35.3445047Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/htmltools_0.5.1.1.tar.gz' 2021-05-16T17:48:36.4690488Z Content type 'binary/octet-stream' length 72110 bytes (70 KB) 2021-05-16T17:48:36.4787956Z ================================================== 2021-05-16T17:48:36.4788465Z downloaded 70 KB 2021-05-16T17:48:36.4788732Z 2021-05-16T17:48:36.4830930Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rmarkdown_2.8.tar.gz' 2021-05-16T17:48:37.5404055Z Content type 'binary/octet-stream' length 3236609 bytes (3.1 MB) 2021-05-16T17:48:38.0837963Z ================================================== 2021-05-16T17:48:38.0838714Z downloaded 3.1 MB 2021-05-16T17:48:38.0839137Z 2021-05-16T17:48:38.0881873Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rticles_0.19.tar.gz' 2021-05-16T17:48:39.0638368Z Content type 'binary/octet-stream' length 1634953 bytes (1.6 MB) 2021-05-16T17:48:39.5770662Z ================================================== 2021-05-16T17:48:39.5771178Z downloaded 1.6 MB 2021-05-16T17:48:39.5771631Z 2021-05-16T17:48:39.5813293Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/abind_1.4-5.tar.gz' 2021-05-16T17:48:40.5193349Z Content type 'application/x-tar' length 21895 bytes (21 KB) 2021-05-16T17:48:40.5925718Z ================================================== 2021-05-16T17:48:40.5926294Z downloaded 21 KB 2021-05-16T17:48:40.5926605Z 2021-05-16T17:48:40.5975923Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bitops_1.0-7.tar.gz' 2021-05-16T17:48:41.6589657Z Content type 'binary/octet-stream' length 10887 bytes (10 KB) 2021-05-16T17:48:41.6631585Z ================================================== 2021-05-16T17:48:41.6632125Z downloaded 10 KB 2021-05-16T17:48:41.6632417Z 2021-05-16T17:48:41.8555478Z * installing *source* package ‘base64enc’ ... 2021-05-16T17:48:41.8562811Z ** package ‘base64enc’ successfully unpacked and MD5 sums checked 2021-05-16T17:48:41.8563852Z ** using staged installation 2021-05-16T17:48:41.8662216Z ** libs 2021-05-16T17:48:41.8712462Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T17:48:41.9759174Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c uriencode.c -o uriencode.o 2021-05-16T17:48:42.0475496Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-16T17:48:42.1172616Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o base64enc.so base64.o uriencode.o utf8.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:48:42.1381630Z installing to /home/runner/work/_temp/Library/00LOCK-base64enc/00new/base64enc/libs 2021-05-16T17:48:42.1397376Z ** R 2021-05-16T17:48:42.1425721Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:48:42.3813642Z ** help 2021-05-16T17:48:42.4037431Z *** installing help indices 2021-05-16T17:48:42.4193549Z ** building package indices 2021-05-16T17:48:42.5997898Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:48:42.7669996Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:48:42.7842561Z ** testing if installed package can be loaded from final location 2021-05-16T17:48:42.9479527Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:48:42.9485427Z * DONE (base64enc) 2021-05-16T17:48:43.1552038Z * installing *source* package ‘tinytex’ ... 2021-05-16T17:48:43.1563257Z ** package ‘tinytex’ successfully unpacked and MD5 sums checked 2021-05-16T17:48:43.1564287Z ** using staged installation 2021-05-16T17:48:43.1758172Z ** R 2021-05-16T17:48:43.1826221Z ** inst 2021-05-16T17:48:43.1832823Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:48:43.8217910Z ** help 2021-05-16T17:48:43.8533604Z *** installing help indices 2021-05-16T17:48:43.8792983Z ** building package indices 2021-05-16T17:48:44.0727472Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:48:44.2511322Z ** testing if installed package can be loaded from final location 2021-05-16T17:48:44.4404757Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:48:44.4415441Z * DONE (tinytex) 2021-05-16T17:48:44.6445830Z * installing *source* package ‘abind’ ... 2021-05-16T17:48:44.6457072Z ** package ‘abind’ successfully unpacked and MD5 sums checked 2021-05-16T17:48:44.6458130Z ** using staged installation 2021-05-16T17:48:44.6560212Z ** R 2021-05-16T17:48:44.6607351Z ** inst 2021-05-16T17:48:44.6614394Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:48:46.0845989Z ** help 2021-05-16T17:48:46.0847744Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bit-ops.c -o bit-ops.o 2021-05-16T17:48:46.0855306Z *** installing help indices 2021-05-16T17:48:46.0856056Z ** building package indices 2021-05-16T17:48:46.0857004Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:48:46.0858076Z ** testing if installed package can be loaded from final location 2021-05-16T17:48:46.0859241Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:48:46.0860078Z * DONE (abind) 2021-05-16T17:48:46.0861182Z * installing *source* package ‘bitops’ ... 2021-05-16T17:48:46.0862368Z ** package ‘bitops’ successfully unpacked and MD5 sums checked 2021-05-16T17:48:46.0863236Z ** using staged installation 2021-05-16T17:48:46.0863807Z ** libs 2021-05-16T17:48:46.1387961Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cksum.c -o cksum.o 2021-05-16T17:48:46.1937357Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:48:46.2368904Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o bitops.so bit-ops.o cksum.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:48:46.2535840Z installing to /home/runner/work/_temp/Library/00LOCK-bitops/00new/bitops/libs 2021-05-16T17:48:46.2541991Z ** R 2021-05-16T17:48:46.2566087Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:48:46.4683425Z ** help 2021-05-16T17:48:46.4929635Z *** installing help indices 2021-05-16T17:48:46.5099598Z ** building package indices 2021-05-16T17:48:46.6916991Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:48:46.8590466Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:48:46.8764506Z ** testing if installed package can be loaded from final location 2021-05-16T17:48:47.0387367Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:48:47.0391888Z * DONE (bitops) 2021-05-16T17:48:47.2746903Z * installing *source* package ‘htmltools’ ... 2021-05-16T17:48:47.2767719Z ** package ‘htmltools’ successfully unpacked and MD5 sums checked 2021-05-16T17:48:47.2768904Z ** using staged installation 2021-05-16T17:48:47.2907513Z ** libs 2021-05-16T17:48:47.2953563Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:48:47.3389301Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c template.c -o template.o 2021-05-16T17:48:47.4402446Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o htmltools.so init.o template.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:48:47.4613436Z installing to /home/runner/work/_temp/Library/00LOCK-htmltools/00new/htmltools/libs 2021-05-16T17:48:47.4625799Z ** R 2021-05-16T17:48:47.4750464Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:48:48.7703510Z ** help 2021-05-16T17:48:48.8471292Z *** installing help indices 2021-05-16T17:48:48.9004434Z ** building package indices 2021-05-16T17:48:49.1309602Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:48:49.3217471Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:48:49.3391205Z ** testing if installed package can be loaded from final location 2021-05-16T17:48:49.5526573Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:48:49.5540925Z * DONE (htmltools) 2021-05-16T17:48:50.2915212Z * installing *source* package ‘rmarkdown’ ... 2021-05-16T17:48:50.3187229Z ** package ‘rmarkdown’ successfully unpacked and MD5 sums checked 2021-05-16T17:48:50.3188438Z ** using staged installation 2021-05-16T17:48:50.3448284Z ** R 2021-05-16T17:48:50.3804615Z ** inst 2021-05-16T17:48:50.4016244Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:48:53.3528482Z ** help 2021-05-16T17:48:53.5361098Z *** installing help indices 2021-05-16T17:48:53.6739937Z *** copying figures 2021-05-16T17:48:53.6742960Z ** building package indices 2021-05-16T17:48:53.9471568Z ** installing vignettes 2021-05-16T17:48:53.9549336Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:48:54.1857491Z ** testing if installed package can be loaded from final location 2021-05-16T17:48:54.4735450Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:48:54.4769076Z * DONE (rmarkdown) 2021-05-16T17:48:55.0163971Z * installing *source* package ‘rticles’ ... 2021-05-16T17:48:55.0323895Z ** package ‘rticles’ successfully unpacked and MD5 sums checked 2021-05-16T17:48:55.0325121Z ** using staged installation 2021-05-16T17:48:55.0528894Z ** R 2021-05-16T17:48:55.0587824Z ** inst 2021-05-16T17:48:55.0805739Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:48:55.5019936Z ** help 2021-05-16T17:48:55.5387896Z *** installing help indices 2021-05-16T17:48:55.5703696Z ** building package indices 2021-05-16T17:48:55.7669296Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:48:56.0010309Z ** testing if installed package can be loaded from final location 2021-05-16T17:48:56.2328205Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:48:56.2367456Z * DONE (rticles) 2021-05-16T17:48:56.2500078Z 2021-05-16T17:48:56.2500825Z The downloaded source packages are in 2021-05-16T17:48:56.2502094Z ‘/tmp/RtmpC0reNy/downloaded_packages’ 2021-05-16T17:48:56.3188898Z Skipping install of 'RNifti' from a github remote, the SHA1 (929106d1) has not changed since last install. 2021-05-16T17:48:56.3189856Z Use `force = TRUE` to force installation 2021-05-16T17:48:56.4975452Z 2021-05-16T17:48:56.4989546Z checking for file ‘/tmp/RtmpC0reNy/remotesd545240ebae2/neuroconductor-oro.nifti-bd06b05/DESCRIPTION’ ... 2021-05-16T17:48:56.5022012Z 2021-05-16T17:48:56.5025004Z ✔ checking for file ‘/tmp/RtmpC0reNy/remotesd545240ebae2/neuroconductor-oro.nifti-bd06b05/DESCRIPTION’ 2021-05-16T17:48:56.5254563Z 2021-05-16T17:48:56.5275195Z 2021-05-16T17:48:56.5277253Z ─ preparing ‘oro.nifti’: 2021-05-16T17:48:56.5286194Z 2021-05-16T17:48:56.5288050Z 2021-05-16T17:48:56.5391765Z checking DESCRIPTION meta-information ... 2021-05-16T17:48:56.5415127Z 2021-05-16T17:48:57.0884427Z ✔ checking DESCRIPTION meta-information 2021-05-16T17:48:57.0892488Z 2021-05-16T17:48:57.0893068Z 2021-05-16T17:48:57.0894904Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-16T17:48:57.0895608Z 2021-05-16T17:48:57.0896063Z 2021-05-16T17:48:57.0897005Z ─ checking for empty or unneeded directories 2021-05-16T17:48:57.0898448Z Removed empty directory ‘oro.nifti/vignettes’ 2021-05-16T17:48:57.0899047Z 2021-05-16T17:48:57.0899508Z 2021-05-16T17:48:57.0900585Z Omitted ‘LazyData’ and ‘LazyDataCompression’ from DESCRIPTION 2021-05-16T17:48:57.0901275Z 2021-05-16T17:48:57.0901727Z 2021-05-16T17:48:57.0902533Z ─ building ‘oro.nifti_0.10.3.tar.gz’ 2021-05-16T17:48:57.1624860Z 2021-05-16T17:48:57.1628134Z 2021-05-16T17:48:57.1629618Z 2021-05-16T17:48:57.2180672Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T17:48:57.2182131Z (as ‘lib’ is unspecified) 2021-05-16T17:48:57.7260957Z * installing *source* package ‘oro.nifti’ ... 2021-05-16T17:48:57.7262759Z ** using staged installation 2021-05-16T17:48:57.7449110Z ** R 2021-05-16T17:48:57.7876043Z ** demo 2021-05-16T17:48:57.7881814Z ** inst 2021-05-16T17:48:57.7951759Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:49:04.0588538Z 2021-05-16T17:49:04.0590575Z Creating a new generic function for ‘origin’ in package ‘oro.nifti’ 2021-05-16T17:49:04.0592199Z ** help 2021-05-16T17:49:04.4128596Z *** installing help indices 2021-05-16T17:49:04.6614454Z ** building package indices 2021-05-16T17:49:05.0536256Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:49:05.5952488Z ** testing if installed package can be loaded from final location 2021-05-16T17:49:06.2485304Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:49:06.2565937Z * DONE (oro.nifti) 2021-05-16T17:49:06.2758109Z Installing 22 packages: later, promises, jquerylib, sass, bslib, sourcetools, xtable, httpuv, webshot, base64enc, htmlwidgets, htmltools, miniUI, shiny, RNifti, abind, bitops, manipulateWidget, crosstalk, servr, misc3d, rgl 2021-05-16T17:49:06.2763897Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T17:49:06.2764899Z (as ‘lib’ is unspecified) 2021-05-16T17:49:20.9659135Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/later_1.2.0.tar.gz' 2021-05-16T17:49:22.0278709Z Content type 'binary/octet-stream' length 62650 bytes (61 KB) 2021-05-16T17:49:22.1877290Z ================================================== 2021-05-16T17:49:22.1878411Z downloaded 61 KB 2021-05-16T17:49:22.1878941Z 2021-05-16T17:49:22.1921535Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/promises_1.2.0.1.tar.gz' 2021-05-16T17:49:23.2790068Z Content type 'binary/octet-stream' length 3137334 bytes (3.0 MB) 2021-05-16T17:49:23.8748149Z ================================================== 2021-05-16T17:49:23.8775890Z downloaded 3.0 MB 2021-05-16T17:49:23.8776723Z 2021-05-16T17:49:23.8798156Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/jquerylib_0.1.4.tar.gz' 2021-05-16T17:49:25.1233324Z Content type 'binary/octet-stream' length 520197 bytes (508 KB) 2021-05-16T17:49:25.4451984Z ================================================== 2021-05-16T17:49:25.4452973Z downloaded 508 KB 2021-05-16T17:49:25.4453431Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/webshot_0.5.2.tar.gz' 2021-05-16T17:49:35.2596178Z Content type 'binary/octet-stream' length 159097 bytes (155 KB) 2021-05-16T17:49:35.4306481Z ================================================== 2021-05-16T17:49:35.4307535Z downloaded 155 KB 2021-05-16T17:49:35.4308193Z 2021-05-16T17:49:35.4348018Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/base64enc_0.1-3.tar.gz' 2021-05-16T17:49:36.0690133Z Content type 'application/x-tar' length 7843 bytes 2021-05-16T17:49:36.0691645Z ================================================== 2021-05-16T17:49:36.0692285Z downloaded 7843 bytes 2021-05-16T17:49:36.0693247Z 2021-05-16T17:49:36.0730554Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/htmlwidgets_1.5.3.tar.gz' 2021-05-16T17:49:37.1992911Z Content type 'binary/octet-stream' length 323578 bytes (315 KB) 2021-05-16T17:49:37.5425476Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/shiny_1.6.0.tar.gz' 2021-05-16T17:49:40.8188881Z Content type 'binary/octet-stream' length 4164395 bytes (4.0 MB) 2021-05-16T17:49:41.3602087Z ================================================== 2021-05-16T17:49:41.3602625Z downloaded 4.0 MB 2021-05-16T17:49:41.3602924Z 2021-05-16T17:49:41.3646388Z trying URL 'https://cloud.r-project.org/src/contrib/RNifti_1.3.1.tar.gz' 2021-05-16T17:49:42.0405242Z Content type 'application/x-gzip' length 1076925 bytes (1.0 MB) 2021-05-16T17:49:42.4535557Z ================================================== 2021-05-16T17:49:42.4537428Z downloaded 1.0 MB 2021-05-16T17:49:42.4538723Z 2021-05-16T17:49:42.4566708Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/abind_1.4-5.tar.gz' 2021-05-16T17:49:43.0958317Z Content type 'application/x-tar' length 21895 bytes (21 KB) 2021-05-16T17:49:43.0997948Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/crosstalk_1.1.1.tar.gz' 2021-05-16T17:49:48.2990006Z Content type 'binary/octet-stream' length 676876 bytes (661 KB) 2021-05-16T17:49:48.6135122Z ================================================== 2021-05-16T17:49:48.6136993Z downloaded 661 KB 2021-05-16T17:49:48.6138231Z 2021-05-16T17:49:48.6178371Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/servr_0.22.tar.gz' 2021-05-16T17:49:50.4255858Z Content type 'binary/octet-stream' length 20338 bytes (19 KB) 2021-05-16T17:49:50.4975153Z ================================================== 2021-05-16T17:49:50.4976027Z downloaded 19 KB 2021-05-16T17:49:50.4976474Z 2021-05-16T17:49:50.5016705Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/misc3d_0.9-0.tar.gz' 2021-05-16T17:49:51.4034141Z Content type 'binary/octet-stream' length 67105 bytes (65 KB) 2021-05-16T17:49:51.5596651Z 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-I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-16T17:49:57.9370774Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c callback_registry.cpp -o callback_registry.o 2021-05-16T17:50:02.6498174Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c debug.cpp -o debug.o 2021-05-16T17:50:02.9789519Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:50:03.0227433Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c later.cpp -o later.o 2021-05-16T17:50:07.5793794Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c later_posix.cpp -o later_posix.o 2021-05-16T17:50:10.5832314Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c later_win32.cpp -o later_win32.o 2021-05-16T17:50:10.5981006Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c timer_posix.cpp -o timer_posix.o 2021-05-16T17:50:10.9838656Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c timestamp_unix.cpp -o timestamp_unix.o 2021-05-16T17:50:11.2660485Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c timestamp_win32.cpp -o timestamp_win32.o 2021-05-16T17:50:11.2803027Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c tinycthread.c -o tinycthread.o 2021-05-16T17:50:11.3600531Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o later.so RcppExports.o callback_registry.o debug.o init.o later.o later_posix.o later_win32.o timer_posix.o timestamp_unix.o timestamp_win32.o tinycthread.o -pthread -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:50:11.4657174Z installing to /home/runner/work/_temp/Library/00LOCK-later/00new/later/libs 2021-05-16T17:50:11.4710113Z ** R 2021-05-16T17:50:11.4744063Z ** inst 2021-05-16T17:50:11.4754887Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:50:11.8186554Z ** help 2021-05-16T17:50:11.8382634Z *** installing help indices 2021-05-16T17:50:11.8586609Z ** building package indices 2021-05-16T17:50:12.0412301Z ** installing vignettes 2021-05-16T17:50:12.0511862Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:50:12.3193949Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:50:12.3389665Z ** testing if installed package can be loaded from final location 2021-05-16T17:50:12.6015207Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:50:12.6016342Z * DONE (later) 2021-05-16T17:50:12.8310838Z * installing *source* package ‘sourcetools’ ... 2021-05-16T17:50:12.8331628Z ** package ‘sourcetools’ successfully unpacked and MD5 sums checked 2021-05-16T17:50:12.8334851Z ** using staged installation 2021-05-16T17:50:12.8432964Z ** libs 2021-05-16T17:50:12.8483161Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fpic -g -O2 -c Reader.cpp -o Reader.o 2021-05-16T17:50:13.6655835Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fpic -g -O2 -c Tokenizer.cpp -o Tokenizer.o 2021-05-16T17:50:15.1847547Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fpic -g -O2 -c sourcetools-init.c -o sourcetools-init.o 2021-05-16T17:50:15.2289702Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o sourcetools.so Reader.o Tokenizer.o sourcetools-init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:50:15.2887528Z installing to /home/runner/work/_temp/Library/00LOCK-sourcetools/00new/sourcetools/libs 2021-05-16T17:50:15.2907306Z ** R 2021-05-16T17:50:15.2930231Z ** inst 2021-05-16T17:50:15.2959830Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:50:15.4995804Z ** help 2021-05-16T17:50:15.5103255Z *** installing help indices 2021-05-16T17:50:15.5250357Z ** building package indices 2021-05-16T17:50:15.7039659Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:50:15.8747009Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:50:15.8926703Z ** testing if installed package can be loaded from final location 2021-05-16T17:50:16.0568803Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:50:16.0578076Z * DONE (sourcetools) 2021-05-16T17:50:16.3059415Z * installing *source* package ‘xtable’ ... 2021-05-16T17:50:16.3089400Z ** package ‘xtable’ successfully unpacked and MD5 sums checked 2021-05-16T17:50:16.3090600Z ** using staged installation 2021-05-16T17:50:16.3241449Z ** R 2021-05-16T17:50:16.3328103Z ** data 2021-05-16T17:50:16.3330683Z ** inst 2021-05-16T17:50:16.3349951Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:50:17.1814854Z ** help 2021-05-16T17:50:17.2639871Z *** installing help indices 2021-05-16T17:50:17.3116195Z ** building package indices 2021-05-16T17:50:17.5334633Z ** installing vignettes 2021-05-16T17:50:17.5373121Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:50:17.7049967Z ** testing if installed package can be loaded from final location 2021-05-16T17:50:17.8883179Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:50:17.8896706Z * DONE (xtable) 2021-05-16T17:50:18.1231081Z * installing *source* package ‘webshot’ ... 2021-05-16T17:50:18.1252726Z ** package ‘webshot’ successfully unpacked and MD5 sums checked 2021-05-16T17:50:18.1253764Z ** using staged installation 2021-05-16T17:50:18.1382655Z ** R 2021-05-16T17:50:18.1434793Z ** inst 2021-05-16T17:50:18.1454052Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:50:18.5614552Z ** help 2021-05-16T17:50:18.5830395Z *** installing help indices 2021-05-16T17:50:18.6093233Z ** building package indices 2021-05-16T17:50:18.7958124Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:50:18.9646512Z ** testing if installed package can be loaded from final location 2021-05-16T17:50:19.1369295Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:50:19.1379202Z * DONE (webshot) 2021-05-16T17:50:19.3301581Z * installing *source* package ‘base64enc’ ... 2021-05-16T17:50:19.3309274Z ** package ‘base64enc’ successfully unpacked and MD5 sums checked 2021-05-16T17:50:19.3338831Z ** using staged installation 2021-05-16T17:50:19.3436320Z ** libs 2021-05-16T17:50:19.3482579Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T17:50:19.4523615Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c uriencode.c -o uriencode.o 2021-05-16T17:50:19.5244361Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-16T17:50:19.5935775Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o base64enc.so base64.o uriencode.o utf8.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:50:19.6143282Z installing to /home/runner/work/_temp/Library/00LOCK-base64enc/00new/base64enc/libs 2021-05-16T17:50:19.6158954Z ** R 2021-05-16T17:50:19.6186560Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:50:19.8579995Z ** help 2021-05-16T17:50:19.8803201Z *** installing help indices 2021-05-16T17:50:19.8962324Z ** building package indices 2021-05-16T17:50:20.0765987Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:50:20.2455466Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:50:20.2628731Z ** testing if installed package can be loaded from final location 2021-05-16T17:50:20.4251919Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:50:20.4258172Z * DONE (base64enc) 2021-05-16T17:50:20.7509879Z * installing *source* package ‘RNifti’ ... 2021-05-16T17:50:20.7582323Z ** package ‘RNifti’ successfully unpacked and MD5 sums checked 2021-05-16T17:50:20.7612162Z ** using staged installation 2021-05-16T17:50:20.7753061Z ** libs 2021-05-16T17:50:20.7805394Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c main.cpp -o main.o 2021-05-16T17:50:38.0161613Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zzz.c -o zzz.o 2021-05-16T17:50:38.1011780Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/adler32.c -o zlib/adler32.o 2021-05-16T17:50:38.1848126Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/compress.c -o zlib/compress.o 2021-05-16T17:50:38.2208173Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/crc32.c -o zlib/crc32.o 2021-05-16T17:50:38.3257488Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/deflate.c -o zlib/deflate.o 2021-05-16T17:50:38.7720190Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzclose.c -o zlib/gzclose.o 2021-05-16T17:50:38.8115659Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzlib.c -o zlib/gzlib.o 2021-05-16T17:50:38.9262128Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzread.c -o zlib/gzread.o 2021-05-16T17:50:39.0717112Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzwrite.c -o zlib/gzwrite.o 2021-05-16T17:50:39.1973683Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/infback.c -o zlib/infback.o 2021-05-16T17:50:39.4243482Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inffast.c -o zlib/inffast.o 2021-05-16T17:50:39.5307130Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inflate.c -o zlib/inflate.o 2021-05-16T17:50:40.0119554Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inftrees.c -o zlib/inftrees.o 2021-05-16T17:50:40.1030359Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/trees.c -o zlib/trees.o 2021-05-16T17:50:40.3956016Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/uncompr.c -o zlib/uncompr.o 2021-05-16T17:50:40.4299920Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/zutil.c -o zlib/zutil.o 2021-05-16T17:50:40.4724007Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c znzlib/znzlib.c -o znzlib/znzlib.o 2021-05-16T17:50:40.5471937Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c niftilib/nifti1_io.c -o niftilib/nifti1_io.o 2021-05-16T17:50:41.6158211Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c niftilib/nifti2_io.c -o niftilib/nifti2_io.o 2021-05-16T17:50:43.8447456Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o RNifti.so main.o zzz.o zlib/adler32.o zlib/compress.o zlib/crc32.o zlib/deflate.o zlib/gzclose.o zlib/gzlib.o zlib/gzread.o zlib/gzwrite.o zlib/infback.o zlib/inffast.o zlib/inflate.o zlib/inftrees.o zlib/trees.o zlib/uncompr.o zlib/zutil.o znzlib/znzlib.o niftilib/nifti1_io.o niftilib/nifti2_io.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:50:44.0230789Z installing to /home/runner/work/_temp/Library/00LOCK-RNifti/00new/RNifti/libs 2021-05-16T17:50:44.0353395Z ** R 2021-05-16T17:50:44.0425833Z ** inst 2021-05-16T17:50:44.0454721Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:50:44.7818965Z ** help 2021-05-16T17:50:44.8323612Z *** installing help indices 2021-05-16T17:50:44.8658773Z ** building package indices 2021-05-16T17:50:45.0703513Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:50:45.3294589Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:50:45.3523915Z ** testing if installed package can be loaded from final location 2021-05-16T17:50:45.6149891Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:50:45.6162073Z * DONE (RNifti) 2021-05-16T17:50:45.8314420Z * installing *source* package ‘abind’ ... 2021-05-16T17:50:45.8325538Z ** package ‘abind’ successfully unpacked and MD5 sums checked 2021-05-16T17:50:45.8353588Z ** using staged installation 2021-05-16T17:50:45.8454487Z ** R 2021-05-16T17:50:45.8502067Z ** inst 2021-05-16T17:50:45.8509880Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:50:46.3740062Z ** help 2021-05-16T17:50:47.1232082Z *** installing help indices 2021-05-16T17:50:47.1233282Z ** building package indices 2021-05-16T17:50:47.1234291Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:50:47.1235373Z ** testing if installed package can be loaded from final location 2021-05-16T17:50:47.1236557Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:50:47.1237432Z * DONE (abind) 2021-05-16T17:50:47.1465141Z * installing *source* package ‘bitops’ ... 2021-05-16T17:50:47.1474126Z ** package ‘bitops’ successfully unpacked and MD5 sums checked 2021-05-16T17:50:47.1501089Z ** using staged installation 2021-05-16T17:50:47.1589872Z ** libs 2021-05-16T17:50:47.1635596Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bit-ops.c -o bit-ops.o 2021-05-16T17:50:47.3371092Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cksum.c -o cksum.o 2021-05-16T17:50:47.3924275Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:50:47.4353101Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o bitops.so bit-ops.o cksum.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:50:47.4502905Z installing to /home/runner/work/_temp/Library/00LOCK-bitops/00new/bitops/libs 2021-05-16T17:50:47.4519127Z ** R 2021-05-16T17:50:47.4543180Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:50:47.6649726Z ** help 2021-05-16T17:50:47.6894970Z *** installing help indices 2021-05-16T17:50:47.7065605Z ** building package indices 2021-05-16T17:50:47.8902823Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:50:48.0592141Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:50:48.0761773Z ** testing if installed package can be loaded from final location 2021-05-16T17:50:48.2415379Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:50:48.2420677Z * DONE (bitops) 2021-05-16T17:50:48.4560660Z * installing *source* package ‘misc3d’ ... 2021-05-16T17:50:48.4576224Z ** package ‘misc3d’ successfully unpacked and MD5 sums checked 2021-05-16T17:50:48.4577405Z ** using staged installation 2021-05-16T17:50:48.4729783Z ** R 2021-05-16T17:50:48.4849754Z ** data 2021-05-16T17:50:48.4852526Z ** demo 2021-05-16T17:50:48.4858594Z ** inst 2021-05-16T17:50:48.4865801Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:50:50.7214182Z ** help 2021-05-16T17:50:50.7219244Z ##[warning]Warning: no DISPLAY variable so Tk is not available 2021-05-16T17:50:50.7670983Z *** installing help indices 2021-05-16T17:50:50.8036063Z ** building package indices 2021-05-16T17:50:51.0119817Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:50:51.1926657Z ##[warning]Warning: no DISPLAY variable so Tk is not available 2021-05-16T17:50:51.1954921Z ** testing if installed package can be loaded from final location 2021-05-16T17:50:51.4015514Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:50:51.4017414Z ##[warning]Warning: no DISPLAY variable so Tk is not available 2021-05-16T17:50:51.4018925Z * DONE (misc3d) 2021-05-16T17:50:51.7889092Z * installing *source* package ‘promises’ ... 2021-05-16T17:50:51.8000469Z ** package ‘promises’ successfully unpacked and MD5 sums checked 2021-05-16T17:50:51.8001280Z ** using staged installation 2021-05-16T17:50:51.8142265Z ** libs 2021-05-16T17:50:51.8193707Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/later/include' -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-16T17:50:55.6566952Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/later/include' -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c promise_task.cpp -o promise_task.o 2021-05-16T17:50:59.1233760Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o promises.so RcppExports.o promise_task.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:50:59.1935447Z installing to /home/runner/work/_temp/Library/00LOCK-promises/00new/promises/libs 2021-05-16T17:50:59.1961454Z ** R 2021-05-16T17:50:59.2035194Z ** inst 2021-05-16T17:50:59.2074006Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:51:01.0152337Z ** help 2021-05-16T17:51:01.0611602Z *** installing help indices 2021-05-16T17:51:01.0919900Z *** copying figures 2021-05-16T17:51:01.0923686Z ** building package indices 2021-05-16T17:51:01.2934935Z ** installing vignettes 2021-05-16T17:51:01.3022274Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:51:01.5790412Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:51:01.5971830Z ** testing if installed package can be loaded from final location 2021-05-16T17:51:01.8981462Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:51:01.9004082Z * DONE (promises) 2021-05-16T17:51:02.1397010Z * installing *source* package ‘htmltools’ ... 2021-05-16T17:51:02.1418585Z ** package ‘htmltools’ successfully unpacked and MD5 sums checked 2021-05-16T17:51:02.1448834Z ** using staged installation 2021-05-16T17:51:02.1593017Z ** libs 2021-05-16T17:51:02.1637287Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:51:02.2069884Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c template.c -o template.o 2021-05-16T17:51:02.3098186Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o htmltools.so init.o template.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:51:02.3335690Z installing to /home/runner/work/_temp/Library/00LOCK-htmltools/00new/htmltools/libs 2021-05-16T17:51:02.3336957Z ** R 2021-05-16T17:51:02.3439068Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:51:03.6560156Z ** help 2021-05-16T17:51:03.7330937Z *** installing help indices 2021-05-16T17:51:03.7869931Z ** building package indices 2021-05-16T17:51:04.0178609Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:51:04.2119397Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:51:04.2289865Z ** testing if installed package can be loaded from final location 2021-05-16T17:51:04.4424469Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:51:04.4439227Z * DONE (htmltools) 2021-05-16T17:51:04.7074172Z * installing *source* package ‘jquerylib’ ... 2021-05-16T17:51:04.7116925Z ** package ‘jquerylib’ successfully unpacked and MD5 sums checked 2021-05-16T17:51:04.7118117Z ** using staged installation 2021-05-16T17:51:04.7269983Z ** R 2021-05-16T17:51:04.7288627Z ** inst 2021-05-16T17:51:04.7319180Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:51:04.9584535Z ** help 2021-05-16T17:51:04.9670640Z *** installing help indices 2021-05-16T17:51:04.9807019Z ** building package indices 2021-05-16T17:51:05.1590296Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:51:05.3518005Z ** testing if installed package can be loaded from final location 2021-05-16T17:51:05.5429206Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:51:05.5435238Z * DONE (jquerylib) 2021-05-16T17:51:06.0893250Z * installing *source* package ‘sass’ ... 2021-05-16T17:51:06.1065182Z ** package ‘sass’ successfully unpacked and MD5 sums checked 2021-05-16T17:51:06.1067713Z ** using staged installation 2021-05-16T17:51:06.1227652Z ** libs 2021-05-16T17:51:06.1270585Z /opt/R/devel/lib/R/share/make/shlib.mk:18: warning: overriding recipe for target 'shlib-clean' 2021-05-16T17:51:06.1271909Z Makevars:12: warning: ignoring old recipe for target 'shlib-clean' 2021-05-16T17:51:06.1280167Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libsass/include -I/usr/local/include -fpic -g -O2 -c compile.c -o compile.o 2021-05-16T17:51:06.2079861Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libsass/include -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T17:51:06.2435539Z MAKEFLAGS= CC="gcc" CFLAGS="-g -O2 " CXX="g++ -std=gnu++14" AR="ar" LDFLAGS="-L/usr/local/lib" make -C libsass 2021-05-16T17:51:06.2461172Z make[1]: Entering directory '/tmp/RtmpLZV6mt/R.INSTALLdc8c6179757/sass/src/libsass' 2021-05-16T17:51:06.2510852Z gcc -g -O2 -O2 -I ./include -fPIC -c -o src/cencode.o src/cencode.c 2021-05-16T17:51:06.2865340Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast.o src/ast.cpp 2021-05-16T17:51:09.4631045Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_values.o src/ast_values.cpp 2021-05-16T17:51:12.4367055Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_supports.o src/ast_supports.cpp 2021-05-16T17:51:13.5626547Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_cmp.o src/ast_sel_cmp.cpp 2021-05-16T17:51:14.7886754Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_unify.o src/ast_sel_unify.cpp 2021-05-16T17:51:16.3856223Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_super.o src/ast_sel_super.cpp 2021-05-16T17:51:17.8864526Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_weave.o src/ast_sel_weave.cpp 2021-05-16T17:51:20.6226718Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_selectors.o src/ast_selectors.cpp 2021-05-16T17:51:23.9501046Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/context.o src/context.cpp 2021-05-16T17:51:27.8513160Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/constants.o src/constants.cpp 2021-05-16T17:51:28.1640081Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_utils.o src/fn_utils.cpp 2021-05-16T17:51:29.7252376Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_miscs.o src/fn_miscs.cpp 2021-05-16T17:51:31.7790599Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_maps.o src/fn_maps.cpp 2021-05-16T17:51:33.4268236Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_lists.o src/fn_lists.cpp 2021-05-16T17:51:35.8691482Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_colors.o src/fn_colors.cpp 2021-05-16T17:51:38.6367468Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_numbers.o src/fn_numbers.cpp 2021-05-16T17:51:40.0725933Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_strings.o src/fn_strings.cpp 2021-05-16T17:51:41.6833089Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_selectors.o src/fn_selectors.cpp 2021-05-16T17:51:43.5079876Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/color_maps.o src/color_maps.cpp 2021-05-16T17:51:45.4757276Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/environment.o src/environment.cpp 2021-05-16T17:51:46.6049316Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_fwd_decl.o src/ast_fwd_decl.cpp 2021-05-16T17:51:47.4912347Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/bind.o src/bind.cpp 2021-05-16T17:51:49.7290752Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/file.o src/file.cpp 2021-05-16T17:51:51.4888518Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/util.o src/util.cpp 2021-05-16T17:51:52.8215174Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/util_string.o src/util_string.cpp 2021-05-16T17:51:53.2360110Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/json.o src/json.cpp 2021-05-16T17:51:53.7465877Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/units.o src/units.cpp 2021-05-16T17:51:54.7823905Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/values.o src/values.cpp 2021-05-16T17:51:55.9633384Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/plugins.o src/plugins.cpp 2021-05-16T17:51:56.5261154Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/source.o src/source.cpp 2021-05-16T17:51:57.6414754Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/position.o src/position.cpp 2021-05-16T17:51:57.6427884Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/lexer.o src/lexer.cpp 2021-05-16T17:51:57.7394005Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/parser.o src/parser.cpp 2021-05-16T17:52:06.8617469Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/parser_selectors.o src/parser_selectors.cpp 2021-05-16T17:52:08.6618282Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/prelexer.o src/prelexer.cpp 2021-05-16T17:52:10.0578039Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/eval.o src/eval.cpp 2021-05-16T17:52:14.4540091Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/eval_selectors.o src/eval_selectors.cpp 2021-05-16T17:52:15.5151260Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/expand.o src/expand.cpp 2021-05-16T17:52:19.1127130Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/listize.o src/listize.cpp 2021-05-16T17:52:20.2450830Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/cssize.o src/cssize.cpp 2021-05-16T17:52:22.6176367Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/extender.o src/extender.cpp 2021-05-16T17:52:26.9592055Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/extension.o src/extension.cpp 2021-05-16T17:52:27.9323617Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/stylesheet.o src/stylesheet.cpp 2021-05-16T17:52:28.4715591Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/output.o src/output.cpp 2021-05-16T17:52:29.9520683Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/inspect.o src/inspect.cpp 2021-05-16T17:52:33.0015082Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/emitter.o src/emitter.cpp 2021-05-16T17:52:33.5786611Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/check_nesting.o src/check_nesting.cpp 2021-05-16T17:52:35.2863181Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/remove_placeholders.o src/remove_placeholders.cpp 2021-05-16T17:52:36.5128781Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass.o src/sass.cpp 2021-05-16T17:52:37.6831867Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_values.o src/sass_values.cpp 2021-05-16T17:52:38.7532570Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_context.o src/sass_context.cpp 2021-05-16T17:52:40.1155679Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_functions.o src/sass_functions.cpp 2021-05-16T17:52:41.6544703Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass2scss.o src/sass2scss.cpp 2021-05-16T17:52:42.0061846Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/backtrace.o src/backtrace.cpp 2021-05-16T17:52:42.4218859Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/operators.o src/operators.cpp 2021-05-16T17:52:43.9047797Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast2c.o src/ast2c.cpp 2021-05-16T17:52:44.9185098Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/c2ast.o src/c2ast.cpp 2021-05-16T17:52:46.1600724Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/to_value.o src/to_value.cpp 2021-05-16T17:52:47.7051697Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/source_map.o src/source_map.cpp 2021-05-16T17:52:48.8649033Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/error_handling.o src/error_handling.cpp 2021-05-16T17:52:51.0656669Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/memory/allocator.o src/memory/allocator.cpp 2021-05-16T17:52:51.3854414Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/memory/shared_ptr.o src/memory/shared_ptr.cpp 2021-05-16T17:52:51.6994034Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/utf8_string.o src/utf8_string.cpp 2021-05-16T17:52:52.1173109Z g++ -std=gnu++14 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/base64vlq.o src/base64vlq.cpp 2021-05-16T17:52:52.4503028Z mkdir lib 2021-05-16T17:52:52.4519629Z ar rcvs lib/libsass.a src/cencode.o src/ast.o src/ast_values.o src/ast_supports.o src/ast_sel_cmp.o src/ast_sel_unify.o src/ast_sel_super.o src/ast_sel_weave.o src/ast_selectors.o src/context.o src/constants.o src/fn_utils.o src/fn_miscs.o src/fn_maps.o src/fn_lists.o src/fn_colors.o src/fn_numbers.o src/fn_strings.o src/fn_selectors.o src/color_maps.o src/environment.o src/ast_fwd_decl.o src/bind.o src/file.o src/util.o src/util_string.o src/json.o src/units.o src/values.o src/plugins.o src/source.o src/position.o src/lexer.o src/parser.o src/parser_selectors.o src/prelexer.o src/eval.o src/eval_selectors.o src/expand.o src/listize.o src/cssize.o src/extender.o src/extension.o src/stylesheet.o src/output.o src/inspect.o src/emitter.o src/check_nesting.o src/remove_placeholders.o src/sass.o src/sass_values.o src/sass_context.o src/sass_functions.o src/sass2scss.o src/backtrace.o src/operators.o src/ast2c.o src/c2ast.o src/to_value.o src/source_map.o src/error_handling.o src/memory/allocator.o src/memory/shared_ptr.o src/utf8_string.o src/base64vlq.o 2021-05-16T17:52:52.4872010Z a - src/cencode.o 2021-05-16T17:52:52.4873339Z a - src/ast.o 2021-05-16T17:52:52.4875142Z a - src/ast_values.o 2021-05-16T17:52:52.4876072Z a - src/ast_supports.o 2021-05-16T17:52:52.4876856Z a - src/ast_sel_cmp.o 2021-05-16T17:52:52.4879027Z a - src/ast_sel_unify.o 2021-05-16T17:52:52.4879992Z a - src/ast_sel_super.o 2021-05-16T17:52:52.4881758Z a - src/ast_sel_weave.o 2021-05-16T17:52:52.4882655Z a - src/ast_selectors.o 2021-05-16T17:52:52.4884746Z a - src/context.o 2021-05-16T17:52:52.4885363Z a - src/constants.o 2021-05-16T17:52:52.4886046Z a - src/fn_utils.o 2021-05-16T17:52:52.4886636Z a - src/fn_miscs.o 2021-05-16T17:52:52.4887193Z a - src/fn_maps.o 2021-05-16T17:52:52.4887762Z a - src/fn_lists.o 2021-05-16T17:52:52.4888528Z a - src/fn_colors.o 2021-05-16T17:52:52.4889222Z a - src/fn_numbers.o 2021-05-16T17:52:52.4889840Z a - src/fn_strings.o 2021-05-16T17:52:52.4890455Z a - src/fn_selectors.o 2021-05-16T17:52:52.4891084Z a - src/color_maps.o 2021-05-16T17:52:52.4891712Z a - src/environment.o 2021-05-16T17:52:52.4892356Z a - src/ast_fwd_decl.o 2021-05-16T17:52:52.4892975Z a - src/bind.o 2021-05-16T17:52:52.4893526Z a - src/file.o 2021-05-16T17:52:52.4895979Z a - src/util.o 2021-05-16T17:52:52.4896580Z a - src/util_string.o 2021-05-16T17:52:52.4897530Z a - src/json.o 2021-05-16T17:52:52.4898164Z a - src/units.o 2021-05-16T17:52:52.4898653Z a - src/values.o 2021-05-16T17:52:52.4899164Z a - src/plugins.o 2021-05-16T17:52:52.4899673Z a - src/source.o 2021-05-16T17:52:52.4900172Z a - src/position.o 2021-05-16T17:52:52.4900687Z a - src/lexer.o 2021-05-16T17:52:52.4901176Z a - src/parser.o 2021-05-16T17:52:52.4901748Z a - src/parser_selectors.o 2021-05-16T17:52:52.4902308Z a - src/prelexer.o 2021-05-16T17:52:52.4902825Z a - src/eval.o 2021-05-16T17:52:52.4903356Z a - src/eval_selectors.o 2021-05-16T17:52:52.4903896Z a - src/expand.o 2021-05-16T17:52:52.4904390Z a - src/listize.o 2021-05-16T17:52:52.4904895Z a - src/cssize.o 2021-05-16T17:52:52.4905401Z a - src/extender.o 2021-05-16T17:52:52.4905939Z a - src/extension.o 2021-05-16T17:52:52.4906492Z a - src/stylesheet.o 2021-05-16T17:52:52.4907009Z a - src/output.o 2021-05-16T17:52:52.4907518Z a - src/inspect.o 2021-05-16T17:52:52.4908022Z a - src/emitter.o 2021-05-16T17:52:52.4908564Z a - src/check_nesting.o 2021-05-16T17:52:52.4909173Z a - src/remove_placeholders.o 2021-05-16T17:52:52.4909734Z a - src/sass.o 2021-05-16T17:52:52.4910238Z a - src/sass_values.o 2021-05-16T17:52:52.4910780Z a - src/sass_context.o 2021-05-16T17:52:52.4911329Z a - src/sass_functions.o 2021-05-16T17:52:52.4911885Z a - src/sass2scss.o 2021-05-16T17:52:52.4912405Z a - src/backtrace.o 2021-05-16T17:52:52.4913581Z a - src/operators.o 2021-05-16T17:52:52.4914126Z a - src/ast2c.o 2021-05-16T17:52:52.4914605Z a - src/c2ast.o 2021-05-16T17:52:52.4915096Z a - src/to_value.o 2021-05-16T17:52:52.4915607Z a - src/source_map.o 2021-05-16T17:52:52.4916163Z a - src/error_handling.o 2021-05-16T17:52:52.4916741Z a - src/memory/allocator.o 2021-05-16T17:52:52.4917343Z a - src/memory/shared_ptr.o 2021-05-16T17:52:52.4917888Z a - src/utf8_string.o 2021-05-16T17:52:52.4918424Z a - src/base64vlq.o 2021-05-16T17:52:52.4919361Z make[1]: Leaving directory '/tmp/RtmpLZV6mt/R.INSTALLdc8c6179757/sass/src/libsass' 2021-05-16T17:52:52.4920941Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o sass.so compile.o init.o ./libsass/lib/libsass.a -lstdc++ -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:52:52.6876751Z installing to /home/runner/work/_temp/Library/00LOCK-sass/00new/sass/libs 2021-05-16T17:52:52.6925482Z ** R 2021-05-16T17:52:52.7032268Z ** inst 2021-05-16T17:52:52.7079792Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:52:53.8882861Z ** help 2021-05-16T17:52:53.9548870Z *** installing help indices 2021-05-16T17:52:53.9964897Z *** copying figures 2021-05-16T17:52:53.9966996Z ** building package indices 2021-05-16T17:52:54.2134833Z ** installing vignettes 2021-05-16T17:52:54.2164989Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:52:54.4224357Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:52:54.4437816Z ** testing if installed package can be loaded from final location 2021-05-16T17:52:54.6635091Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:52:54.6653736Z * DONE (sass) 2021-05-16T17:52:55.3876062Z * installing *source* package ‘httpuv’ ... 2021-05-16T17:52:55.4126091Z ** package ‘httpuv’ successfully unpacked and MD5 sums checked 2021-05-16T17:52:55.4127173Z ** using staged installation 2021-05-16T17:52:55.4279705Z ** libs 2021-05-16T17:52:55.4358312Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c RcppExports-legacy.cpp -o RcppExports-legacy.o 2021-05-16T17:52:59.1334513Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-16T17:53:04.0931339Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c callback.cpp -o callback.o 2021-05-16T17:53:04.4005110Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c callbackqueue.cpp -o callbackqueue.o 2021-05-16T17:53:04.8581221Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c filedatasource-unix.cpp -o filedatasource-unix.o 2021-05-16T17:53:07.9903274Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c filedatasource-win.cpp -o filedatasource-win.o 2021-05-16T17:53:08.0053689Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c fs.cpp -o fs.o 2021-05-16T17:53:10.8749213Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c http.cpp -o http.o 2021-05-16T17:53:14.6874222Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c httprequest.cpp -o httprequest.o 2021-05-16T17:53:21.8477709Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c httpresponse.cpp -o httpresponse.o 2021-05-16T17:53:25.5407641Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c httpuv.cpp -o httpuv.o 2021-05-16T17:53:31.1427544Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c md5.c -o md5.o 2021-05-16T17:53:31.2626860Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c mime.cpp -o mime.o 2021-05-16T17:53:34.0355203Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c set_invalid_parameter.c -o set_invalid_parameter.o 2021-05-16T17:53:34.0494931Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c socket.cpp -o socket.o 2021-05-16T17:53:37.3519431Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c staticpath.cpp -o staticpath.o 2021-05-16T17:53:44.0208301Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c thread.cpp -o thread.o 2021-05-16T17:53:44.0989993Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c timegm.cpp -o timegm.o 2021-05-16T17:53:44.1354227Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c utils.cpp -o utils.o 2021-05-16T17:53:47.6043961Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c uvutil.cpp -o uvutil.o 2021-05-16T17:53:50.5738581Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c webapplication.cpp -o webapplication.o 2021-05-16T17:53:58.5184784Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c websockets-base.cpp -o websockets-base.o 2021-05-16T17:53:58.7744959Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c websockets-hixie76.cpp -o websockets-hixie76.o 2021-05-16T17:54:01.7111041Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c websockets-hybi03.cpp -o websockets-hybi03.o 2021-05-16T17:54:05.0504956Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c websockets-ietf.cpp -o websockets-ietf.o 2021-05-16T17:54:08.2176546Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c websockets.cpp -o websockets.o 2021-05-16T17:54:11.6307016Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c winutils.cpp -o winutils.o 2021-05-16T17:54:11.6456944Z cp -p -f libuv/m4/lt_obsolete.m4 libuv/m4/lt~obsolete.m4 2021-05-16T17:54:11.6485593Z (cd libuv \ 2021-05-16T17:54:11.6486315Z && touch aclocal.m4 \ 2021-05-16T17:54:11.6487394Z && touch -r aclocal.m4 configure Makefile.in \ 2021-05-16T17:54:11.6488130Z && chmod +x configure \ 2021-05-16T17:54:11.6489481Z && CC="gcc" CFLAGS="-g -O2 -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" LDFLAGS="-L/usr/local/lib" ./configure "--quiet") 2021-05-16T17:54:15.3838067Z make --directory=libuv \ 2021-05-16T17:54:15.3839114Z HAVE_DTRACE=0 2021-05-16T17:54:15.3938552Z make[1]: Entering directory '/tmp/RtmpJGqowR/R.INSTALLdddc41c16fd7/httpuv/src/libuv' 2021-05-16T17:54:15.4030022Z CC src/libuv_la-fs-poll.lo 2021-05-16T17:54:15.9895279Z CC src/libuv_la-idna.lo 2021-05-16T17:54:16.5850979Z CC src/libuv_la-inet.lo 2021-05-16T17:54:17.2030578Z CC src/libuv_la-random.lo 2021-05-16T17:54:17.7033379Z CC src/libuv_la-strscpy.lo 2021-05-16T17:54:18.1678386Z CC src/libuv_la-threadpool.lo 2021-05-16T17:54:18.7938406Z CC src/libuv_la-timer.lo 2021-05-16T17:54:19.3836480Z CC src/libuv_la-uv-data-getter-setters.lo 2021-05-16T17:54:19.8859434Z CC src/libuv_la-uv-common.lo 2021-05-16T17:54:20.9018016Z CC src/libuv_la-version.lo 2021-05-16T17:54:21.3622998Z CC src/unix/libuv_la-async.lo 2021-05-16T17:54:21.9377370Z CC src/unix/libuv_la-core.lo 2021-05-16T17:54:23.0166790Z CC src/unix/libuv_la-dl.lo 2021-05-16T17:54:23.5096885Z CC src/unix/libuv_la-fs.lo 2021-05-16T17:54:24.9308165Z CC src/unix/libuv_la-getaddrinfo.lo 2021-05-16T17:54:25.5027210Z CC src/unix/libuv_la-getnameinfo.lo 2021-05-16T17:54:26.0083513Z CC src/unix/libuv_la-loop-watcher.lo 2021-05-16T17:54:26.5850228Z CC src/unix/libuv_la-loop.lo 2021-05-16T17:54:27.1449936Z CC src/unix/libuv_la-pipe.lo 2021-05-16T17:54:27.7547002Z CC src/unix/libuv_la-poll.lo 2021-05-16T17:54:28.2917315Z CC src/unix/libuv_la-process.lo 2021-05-16T17:54:29.0295639Z CC src/unix/libuv_la-random-devurandom.lo 2021-05-16T17:54:29.5352213Z CC src/unix/libuv_la-signal.lo 2021-05-16T17:54:30.3969541Z CC src/unix/libuv_la-stream.lo 2021-05-16T17:54:31.4066095Z CC src/unix/libuv_la-tcp.lo 2021-05-16T17:54:32.0401694Z CC src/unix/libuv_la-thread.lo 2021-05-16T17:54:32.7326338Z CC src/unix/libuv_la-tty.lo 2021-05-16T17:54:33.3157252Z CC src/unix/libuv_la-udp.lo 2021-05-16T17:54:34.3130819Z CC src/unix/libuv_la-linux-core.lo 2021-05-16T17:54:35.2553456Z CC src/unix/libuv_la-linux-inotify.lo 2021-05-16T17:54:36.0404270Z CC src/unix/libuv_la-linux-syscalls.lo 2021-05-16T17:54:36.4846459Z CC src/unix/libuv_la-procfs-exepath.lo 2021-05-16T17:54:36.9730209Z CC src/unix/libuv_la-proctitle.lo 2021-05-16T17:54:37.4928971Z CC src/unix/libuv_la-random-getrandom.lo 2021-05-16T17:54:37.9743524Z CC src/unix/libuv_la-random-sysctl-linux.lo 2021-05-16T17:54:38.4721497Z CC src/unix/libuv_la-sysinfo-loadavg.lo 2021-05-16T17:54:38.9472668Z CCLD libuv.la 2021-05-16T17:54:39.1446865Z ar: `u' modifier ignored since `D' is the default (see `U') 2021-05-16T17:54:39.1746275Z make[1]: Leaving directory '/tmp/RtmpJGqowR/R.INSTALLdddc41c16fd7/httpuv/src/libuv' 2021-05-16T17:54:39.1750199Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c http-parser/http_parser.c -o http-parser/http_parser.o 2021-05-16T17:54:39.7417544Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c sha1/sha1.c -o sha1/sha1.o 2021-05-16T17:54:39.9233017Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilibuv/include -pthread -I'/home/runner/work/_temp/Library/Rcpp/include' -I'/home/runner/work/_temp/Library/later/include' -I/usr/local/include -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -c base64/base64.cpp -o base64/base64.o 2021-05-16T17:54:40.1219257Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o httpuv.so RcppExports-legacy.o RcppExports.o callback.o callbackqueue.o filedatasource-unix.o filedatasource-win.o fs.o http.o httprequest.o httpresponse.o httpuv.o md5.o mime.o set_invalid_parameter.o socket.o staticpath.o thread.o timegm.o utils.o uvutil.o webapplication.o websockets-base.o websockets-hixie76.o websockets-hybi03.o websockets-ietf.o websockets.o winutils.o ./libuv/.libs/libuv.a ./http-parser/http_parser.o ./sha1/sha1.o ./base64/base64.o -pthread -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:54:40.4266227Z installing to /home/runner/work/_temp/Library/00LOCK-httpuv/00new/httpuv/libs 2021-05-16T17:54:40.4465489Z ** R 2021-05-16T17:54:40.4538879Z ** demo 2021-05-16T17:54:40.4547086Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:54:42.6751724Z ** help 2021-05-16T17:54:42.7403785Z *** installing help indices 2021-05-16T17:54:42.7836316Z ** building package indices 2021-05-16T17:54:43.0061605Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:54:43.2872948Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:54:43.3138226Z ** testing if installed package can be loaded from final location 2021-05-16T17:54:43.6271149Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:54:43.6294629Z * DONE (httpuv) 2021-05-16T17:54:43.8932225Z * installing *source* package ‘htmlwidgets’ ... 2021-05-16T17:54:43.8957797Z ** package ‘htmlwidgets’ successfully unpacked and MD5 sums checked 2021-05-16T17:54:43.8959000Z ** using staged installation 2021-05-16T17:54:43.9096482Z ** R 2021-05-16T17:54:43.9166964Z ** inst 2021-05-16T17:54:43.9182940Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:54:44.4994111Z Failed with error: ‘there is no package called ‘shiny’’ 2021-05-16T17:54:44.4995120Z ** help 2021-05-16T17:54:44.5361747Z *** installing help indices 2021-05-16T17:54:44.5632738Z ** building package indices 2021-05-16T17:54:44.7558134Z ** installing vignettes 2021-05-16T17:54:44.7614435Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:54:44.9549957Z ** testing if installed package can be loaded from final location 2021-05-16T17:54:45.1543897Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:54:45.1553361Z * DONE (htmlwidgets) 2021-05-16T17:54:45.4835031Z * installing *source* package ‘crosstalk’ ... 2021-05-16T17:54:45.4910645Z ** package ‘crosstalk’ successfully unpacked and MD5 sums checked 2021-05-16T17:54:45.4911836Z ** using staged installation 2021-05-16T17:54:45.5055596Z ** R 2021-05-16T17:54:45.5105324Z ** inst 2021-05-16T17:54:45.5168179Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:54:46.5579765Z ** help 2021-05-16T17:54:46.5917778Z *** installing help indices 2021-05-16T17:54:46.6229305Z ** building package indices 2021-05-16T17:54:46.8160666Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:54:47.0110313Z ** testing if installed package can be loaded from final location 2021-05-16T17:54:47.2225573Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:54:47.2244322Z * DONE (crosstalk) 2021-05-16T17:54:47.9589110Z * installing *source* package ‘bslib’ ... 2021-05-16T17:54:47.9852568Z ** package ‘bslib’ successfully unpacked and MD5 sums checked 2021-05-16T17:54:47.9854402Z ** using staged installation 2021-05-16T17:54:48.0021605Z ** R 2021-05-16T17:54:48.0638171Z ** inst 2021-05-16T17:54:48.0946021Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:54:48.9420781Z ** help 2021-05-16T17:54:48.9951705Z *** installing help indices 2021-05-16T17:54:49.0339733Z *** copying figures 2021-05-16T17:54:49.0342799Z ** building package indices 2021-05-16T17:54:49.2418430Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:54:49.4795550Z ** testing if installed package can be loaded from final location 2021-05-16T17:54:49.7322745Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:54:49.7383628Z * DONE (bslib) 2021-05-16T17:54:49.9579839Z * installing *source* package ‘servr’ ... 2021-05-16T17:54:49.9592851Z ** package ‘servr’ successfully unpacked and MD5 sums checked 2021-05-16T17:54:49.9595012Z ** using staged installation 2021-05-16T17:54:49.9796033Z ** R 2021-05-16T17:54:49.9848697Z ** inst 2021-05-16T17:54:49.9866387Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:54:50.5820542Z ** help 2021-05-16T17:54:50.6101983Z *** installing help indices 2021-05-16T17:54:50.6345358Z ** building package indices 2021-05-16T17:54:50.8283883Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:54:51.1233941Z ** testing if installed package can be loaded from final location 2021-05-16T17:54:51.4248396Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:54:51.4259100Z * DONE (servr) 2021-05-16T17:54:52.3409743Z * installing *source* package ‘shiny’ ... 2021-05-16T17:54:52.3770248Z ** package ‘shiny’ successfully unpacked and MD5 sums checked 2021-05-16T17:54:52.3770916Z ** using staged installation 2021-05-16T17:54:52.4094476Z ** R 2021-05-16T17:54:52.4845904Z ** inst 2021-05-16T17:54:52.5082226Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:55:07.7134941Z ** help 2021-05-16T17:55:08.3400014Z *** installing help indices 2021-05-16T17:55:08.6238831Z *** copying figures 2021-05-16T17:55:08.6245177Z ** building package indices 2021-05-16T17:55:09.1633893Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:55:09.5184200Z ** testing if installed package can be loaded from final location 2021-05-16T17:55:10.2848717Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:55:10.3008656Z * DONE (shiny) 2021-05-16T17:55:10.5126424Z * installing *source* package ‘miniUI’ ... 2021-05-16T17:55:10.5136295Z ** package ‘miniUI’ successfully unpacked and MD5 sums checked 2021-05-16T17:55:10.5137393Z ** using staged installation 2021-05-16T17:55:10.5266078Z ** R 2021-05-16T17:55:10.5295437Z ** inst 2021-05-16T17:55:10.5303211Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:55:10.9815870Z ** help 2021-05-16T17:55:11.0066479Z *** installing help indices 2021-05-16T17:55:11.0246750Z ** building package indices 2021-05-16T17:55:11.2078360Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:55:11.5601613Z ** testing if installed package can be loaded from final location 2021-05-16T17:55:11.9066074Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:55:11.9071791Z * DONE (miniUI) 2021-05-16T17:55:12.3097500Z * installing *source* package ‘manipulateWidget’ ... 2021-05-16T17:55:12.3217574Z ** package ‘manipulateWidget’ successfully unpacked and MD5 sums checked 2021-05-16T17:55:12.3218826Z ** using staged installation 2021-05-16T17:55:12.3394648Z ** R 2021-05-16T17:55:12.3500792Z ** inst 2021-05-16T17:55:12.3548976Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:55:13.7814686Z ** help 2021-05-16T17:55:13.8482257Z *** installing help indices 2021-05-16T17:55:13.8950674Z ** building package indices 2021-05-16T17:55:14.1098010Z ** installing vignettes 2021-05-16T17:55:14.1157095Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:55:14.4946858Z ** testing if installed package can be loaded from final location 2021-05-16T17:55:14.8991952Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:55:14.9022068Z * DONE (manipulateWidget) 2021-05-16T17:55:15.6666787Z * installing *source* package ‘rgl’ ... 2021-05-16T17:55:15.6952836Z ** package ‘rgl’ successfully unpacked and MD5 sums checked 2021-05-16T17:55:15.6953824Z ** using staged installation 2021-05-16T17:55:15.8539737Z checking for gcc... gcc 2021-05-16T17:55:15.9106175Z checking whether the C compiler works... yes 2021-05-16T17:55:15.9107485Z checking for C compiler default output file name... a.out 2021-05-16T17:55:15.9461367Z checking for suffix of executables... 2021-05-16T17:55:15.9894144Z checking whether we are cross compiling... no 2021-05-16T17:55:16.0115863Z checking for suffix of object files... o 2021-05-16T17:55:16.0320746Z checking whether we are using the GNU C compiler... yes 2021-05-16T17:55:16.0517259Z checking whether gcc accepts -g... yes 2021-05-16T17:55:16.0844957Z checking for gcc option to accept ISO C89... none needed 2021-05-16T17:55:16.1039713Z checking how to run the C preprocessor... gcc -E 2021-05-16T17:55:16.1239726Z checking for gcc... (cached) gcc 2021-05-16T17:55:16.1429162Z checking whether we are using the GNU C compiler... (cached) yes 2021-05-16T17:55:16.1431553Z checking whether gcc accepts -g... (cached) yes 2021-05-16T17:55:16.1433662Z checking for gcc option to accept ISO C89... (cached) none needed 2021-05-16T17:55:16.1461271Z checking for libpng-config... yes 2021-05-16T17:55:16.1462262Z configure: using libpng-config 2021-05-16T17:55:16.1587741Z configure: using libpng dynamic linkage 2021-05-16T17:55:16.2289187Z checking for X... libraries , headers 2021-05-16T17:55:16.2710235Z checking for XAllocClassHint... yes 2021-05-16T17:55:16.3274385Z checking GL/gl.h usability... yes 2021-05-16T17:55:16.3537002Z checking GL/gl.h presence... yes 2021-05-16T17:55:16.3537875Z checking for GL/gl.h... yes 2021-05-16T17:55:16.4134406Z checking GL/glu.h usability... yes 2021-05-16T17:55:16.4395852Z checking GL/glu.h presence... yes 2021-05-16T17:55:16.4396821Z checking for GL/glu.h... yes 2021-05-16T17:55:16.4939111Z checking for glEnd in -lGL... yes 2021-05-16T17:55:16.5455530Z checking for glEnd... yes 2021-05-16T17:55:16.6187463Z checking for gluErrorString in -lGLU... yes 2021-05-16T17:55:16.6959073Z checking for gluErrorString... yes 2021-05-16T17:55:16.6968780Z checking for pkg-config... yes 2021-05-16T17:55:16.7046397Z configure: using Freetype and FTGL 2021-05-16T17:55:16.7242706Z configure: creating ./config.status 2021-05-16T17:55:16.7968105Z config.status: creating R/noOpenGL.R 2021-05-16T17:55:16.8137625Z config.status: creating src/useNULL/Makevars 2021-05-16T17:55:16.8316041Z config.status: creating src/Makevars 2021-05-16T17:55:16.8907743Z ** libs 2021-05-16T17:55:16.8974778Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c ABCLineSet.cpp -o ABCLineSet.o 2021-05-16T17:55:17.3999477Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c BBoxDeco.cpp -o BBoxDeco.o 2021-05-16T17:55:18.0479792Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Background.cpp -o Background.o 2021-05-16T17:55:18.5251885Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c ClipPlane.cpp -o ClipPlane.o 2021-05-16T17:55:18.9825473Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Color.cpp -o Color.o 2021-05-16T17:55:19.1543609Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Disposable.cpp -o Disposable.o 2021-05-16T17:55:19.3841707Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Light.cpp -o Light.o 2021-05-16T17:55:19.5481116Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c LineSet.cpp -o LineSet.o 2021-05-16T17:55:19.9077044Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c LineStripSet.cpp -o LineStripSet.o 2021-05-16T17:55:20.2701119Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Material.cpp -o Material.o 2021-05-16T17:55:20.4497597Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c NULLgui.cpp -o NULLgui.o 2021-05-16T17:55:20.8179499Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c PlaneSet.cpp -o PlaneSet.o 2021-05-16T17:55:21.3996595Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c PointSet.cpp -o PointSet.o 2021-05-16T17:55:21.7577174Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c PrimitiveSet.cpp -o PrimitiveSet.o 2021-05-16T17:55:22.2480882Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c RenderContext.cpp -o RenderContext.o 2021-05-16T17:55:22.5372741Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Shape.cpp -o Shape.o 2021-05-16T17:55:22.9563314Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c SphereMesh.cpp -o SphereMesh.o 2021-05-16T17:55:23.3664725Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c SphereSet.cpp -o SphereSet.o 2021-05-16T17:55:23.8395862Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c SpriteSet.cpp -o SpriteSet.o 2021-05-16T17:55:24.4448331Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c String.cpp -o String.o 2021-05-16T17:55:24.5219799Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Surface.cpp -o Surface.o 2021-05-16T17:55:25.0247944Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c TextSet.cpp -o TextSet.o 2021-05-16T17:55:25.5183499Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Texture.cpp -o Texture.o 2021-05-16T17:55:25.7092668Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c Viewpoint.cpp -o Viewpoint.o 2021-05-16T17:55:26.1738233Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c api.cpp -o api.o 2021-05-16T17:55:27.1361449Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c assert.cpp -o assert.o 2021-05-16T17:55:27.2120338Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c callbacks.cpp -o callbacks.o 2021-05-16T17:55:27.6841043Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c device.cpp -o device.o 2021-05-16T17:55:28.1358852Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c devicemanager.cpp -o devicemanager.o 2021-05-16T17:55:28.7254756Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c fps.cpp -o fps.o 2021-05-16T17:55:29.1052013Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c ftgl.cpp -o ftgl.o 2021-05-16T17:55:30.3532445Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c geom.cpp -o geom.o 2021-05-16T17:55:30.4967172Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c gl2ps.c -o gl2ps.o 2021-05-16T17:55:32.0773043Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c glErrors.cpp -o glErrors.o 2021-05-16T17:55:32.2146405Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c glgui.cpp -o glgui.o 2021-05-16T17:55:32.6902193Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c gui.cpp -o gui.o 2021-05-16T17:55:33.0650398Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c init.cpp -o init.o 2021-05-16T17:55:33.5073958Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c par3d.cpp -o par3d.o 2021-05-16T17:55:34.1368732Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c pixmap.cpp -o pixmap.o 2021-05-16T17:55:34.3948091Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c platform.cpp -o platform.o 2021-05-16T17:55:34.4601133Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c pretty.c -o pretty.o 2021-05-16T17:55:34.5231936Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c render.cpp -o render.o 2021-05-16T17:55:34.7004780Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c rglmath.cpp -o rglmath.o 2021-05-16T17:55:34.9039199Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c rglview.cpp -o rglview.o 2021-05-16T17:55:35.5273161Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c scene.cpp -o scene.o 2021-05-16T17:55:36.2083453Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c select.cpp -o select.o 2021-05-16T17:55:36.5657921Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c subscene.cpp -o subscene.o 2021-05-16T17:55:38.1060948Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c win32gui.cpp -o win32gui.o 2021-05-16T17:55:38.1216646Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c win32lib.cpp -o win32lib.o 2021-05-16T17:55:38.1359711Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c x11gui.cpp -o x11gui.o 2021-05-16T17:55:38.9234750Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DHAVE_FREETYPE -Iext/ftgl -I/usr/include/freetype2 -I/usr/include/libpng16 -Iext -I/usr/local/include -fpic -g -O2 -c x11lib.cpp -o x11lib.o 2021-05-16T17:55:39.3326288Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rgl.so ABCLineSet.o BBoxDeco.o Background.o ClipPlane.o Color.o Disposable.o Light.o LineSet.o LineStripSet.o Material.o NULLgui.o PlaneSet.o PointSet.o PrimitiveSet.o RenderContext.o Shape.o SphereMesh.o SphereSet.o SpriteSet.o String.o Surface.o TextSet.o Texture.o Viewpoint.o api.o assert.o callbacks.o device.o devicemanager.o fps.o ftgl.o geom.o gl2ps.o glErrors.o glgui.o gui.o init.o par3d.o pixmap.o platform.o pretty.o render.o rglmath.o rglview.o scene.o select.o subscene.o win32gui.o win32lib.o x11gui.o x11lib.o -lGLU -lGL -lpng16 -lX11 -lfreetype -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:55:39.4749624Z cp -Rp OpenGL useNULL && \ 2021-05-16T17:55:39.4750903Z cp -p *.c *.h *.cpp useNULL/ && \ 2021-05-16T17:55:39.4751543Z cd useNULL && \ 2021-05-16T17:55:39.4752479Z /opt/R/devel/lib/R/bin/R CMD SHLIB -o useNULL.so *.cpp *.c && \ 2021-05-16T17:55:39.4753136Z cd .. && \ 2021-05-16T17:55:39.4753865Z mkdir -p ../inst/useNULL && \ 2021-05-16T17:55:39.4754619Z mv useNULL/useNULL.so ../inst/useNULL/rgl.so && \ 2021-05-16T17:55:39.4755504Z rm useNULL/*.cpp useNULL/*.c useNULL/*.h useNULL/OpenGL/* 2021-05-16T17:55:39.5458914Z make[1]: Entering directory '/tmp/RtmpXpbWzg/R.INSTALL11f06393389ec/rgl/src/useNULL' 2021-05-16T17:55:39.5461046Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c ABCLineSet.cpp -o ABCLineSet.o 2021-05-16T17:55:39.9846300Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c BBoxDeco.cpp -o BBoxDeco.o 2021-05-16T17:55:40.4463491Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Background.cpp -o Background.o 2021-05-16T17:55:40.8447853Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c ClipPlane.cpp -o ClipPlane.o 2021-05-16T17:55:41.2357527Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Color.cpp -o Color.o 2021-05-16T17:55:41.3532164Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Disposable.cpp -o Disposable.o 2021-05-16T17:55:41.5831346Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Light.cpp -o Light.o 2021-05-16T17:55:41.6906556Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c LineSet.cpp -o LineSet.o 2021-05-16T17:55:41.9965942Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c LineStripSet.cpp -o LineStripSet.o 2021-05-16T17:55:42.3009829Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Material.cpp -o Material.o 2021-05-16T17:55:42.3994194Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c NULLgui.cpp -o NULLgui.o 2021-05-16T17:55:42.7092072Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c PlaneSet.cpp -o PlaneSet.o 2021-05-16T17:55:43.2336228Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c PointSet.cpp -o PointSet.o 2021-05-16T17:55:43.5383201Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c PrimitiveSet.cpp -o PrimitiveSet.o 2021-05-16T17:55:43.9485231Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c RenderContext.cpp -o RenderContext.o 2021-05-16T17:55:44.1862873Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Shape.cpp -o Shape.o 2021-05-16T17:55:44.5453372Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c SphereMesh.cpp -o SphereMesh.o 2021-05-16T17:55:44.8815097Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c SphereSet.cpp -o SphereSet.o 2021-05-16T17:55:45.2973157Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c SpriteSet.cpp -o SpriteSet.o 2021-05-16T17:55:45.8085208Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c String.cpp -o String.o 2021-05-16T17:55:45.8869578Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Surface.cpp -o Surface.o 2021-05-16T17:55:46.3065400Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c TextSet.cpp -o TextSet.o 2021-05-16T17:55:46.5950789Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Texture.cpp -o Texture.o 2021-05-16T17:55:46.7047993Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c Viewpoint.cpp -o Viewpoint.o 2021-05-16T17:55:47.1026125Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c api.cpp -o api.o 2021-05-16T17:55:47.9980482Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c assert.cpp -o assert.o 2021-05-16T17:55:48.0738797Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c callbacks.cpp -o callbacks.o 2021-05-16T17:55:48.4692199Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c device.cpp -o device.o 2021-05-16T17:55:48.8518824Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c devicemanager.cpp -o devicemanager.o 2021-05-16T17:55:49.3691444Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c fps.cpp -o fps.o 2021-05-16T17:55:49.6678276Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c ftgl.cpp -o ftgl.o 2021-05-16T17:55:49.6819413Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c geom.cpp -o geom.o 2021-05-16T17:55:49.8224952Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c glErrors.cpp -o glErrors.o 2021-05-16T17:55:49.8976049Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c glgui.cpp -o glgui.o 2021-05-16T17:55:50.2194402Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c gui.cpp -o gui.o 2021-05-16T17:55:50.5186114Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c init.cpp -o init.o 2021-05-16T17:55:50.8875703Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c par3d.cpp -o par3d.o 2021-05-16T17:55:51.4434755Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c pixmap.cpp -o pixmap.o 2021-05-16T17:55:51.6066730Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c platform.cpp -o platform.o 2021-05-16T17:55:51.6232203Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c render.cpp -o render.o 2021-05-16T17:55:51.7427328Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c rglmath.cpp -o rglmath.o 2021-05-16T17:55:51.9456915Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c rglview.cpp -o rglview.o 2021-05-16T17:55:52.4573708Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c scene.cpp -o scene.o 2021-05-16T17:55:53.0762567Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c select.cpp -o select.o 2021-05-16T17:55:53.3720791Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c subscene.cpp -o subscene.o 2021-05-16T17:55:54.8083768Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c win32gui.cpp -o win32gui.o 2021-05-16T17:55:54.8235070Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c win32lib.cpp -o win32lib.o 2021-05-16T17:55:54.8373323Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c x11gui.cpp -o x11gui.o 2021-05-16T17:55:54.8508728Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fpic -g -O2 -c x11lib.cpp -o x11lib.o 2021-05-16T17:55:54.8640516Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c gl2ps.c -o gl2ps.o 2021-05-16T17:55:54.8792588Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DHAVE_PNG_H -I/usr/include/libpng16 -DRGL_NO_OPENGL -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c pretty.c -o pretty.o 2021-05-16T17:55:54.9438849Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o useNULL.so ABCLineSet.o BBoxDeco.o Background.o ClipPlane.o Color.o Disposable.o Light.o LineSet.o LineStripSet.o Material.o NULLgui.o PlaneSet.o PointSet.o PrimitiveSet.o RenderContext.o Shape.o SphereMesh.o SphereSet.o SpriteSet.o String.o Surface.o TextSet.o Texture.o Viewpoint.o api.o assert.o callbacks.o device.o devicemanager.o fps.o ftgl.o geom.o glErrors.o glgui.o gui.o init.o par3d.o pixmap.o platform.o render.o rglmath.o rglview.o scene.o select.o subscene.o win32gui.o win32lib.o x11gui.o x11lib.o gl2ps.o pretty.o -lpng16 -L/opt/R/devel/lib/R/lib -lR 2021-05-16T17:55:55.0549092Z make[1]: Leaving directory '/tmp/RtmpXpbWzg/R.INSTALL11f06393389ec/rgl/src/useNULL' 2021-05-16T17:55:55.0696352Z installing to /home/runner/work/_temp/Library/00LOCK-rgl/00new/rgl/libs 2021-05-16T17:55:55.0697391Z ** R 2021-05-16T17:55:55.1210989Z ** demo 2021-05-16T17:55:55.1223249Z ** inst 2021-05-16T17:55:55.1352532Z ** byte-compile and prepare package for lazy loading 2021-05-16T17:56:01.9585499Z ** help 2021-05-16T17:56:02.4645215Z *** installing help indices 2021-05-16T17:56:02.7143175Z *** copying figures 2021-05-16T17:56:02.7143771Z ** building package indices 2021-05-16T17:56:03.1185754Z ** installing vignettes 2021-05-16T17:56:03.1267934Z ** testing if installed package can be loaded from temporary location 2021-05-16T17:56:03.5556469Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T17:56:03.5847723Z ** testing if installed package can be loaded from final location 2021-05-16T17:56:04.2437946Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T17:56:04.2510680Z * DONE (rgl) 2021-05-16T17:56:04.2717226Z 2021-05-16T17:56:04.2718100Z The downloaded source packages are in 2021-05-16T17:56:04.2719454Z ‘/tmp/RtmpC0reNy/downloaded_packages’ 2021-05-16T17:56:04.3796817Z Skipping install of 'oro.nifti' from a github remote, the SHA1 (bd06b05d) has not changed since last install. 2021-05-16T17:56:04.3797903Z Use `force = TRUE` to force installation 2021-05-16T17:56:17.9855032Z Skipping install of 'rcmdcheck' from a cran remote, the SHA1 (1.3.3) has not changed since last install. 2021-05-16T17:56:17.9856099Z Use `force = TRUE` to force installation 2021-05-16T17:56:17.9865970Z Skipping install of 'markdown' from a cran remote, the SHA1 (1.1) has not changed since last install. 2021-05-16T17:56:17.9867120Z Use `force = TRUE` to force installation 2021-05-16T17:56:18.0046913Z ##[group]Run options(width = 100) 2021-05-16T17:56:18.0047401Z options(width = 100) 2021-05-16T17:56:18.0047928Z pkgs <- installed.packages()[, "Package"] 2021-05-16T17:56:18.0048578Z sessioninfo::session_info(pkgs, include_base = TRUE) 2021-05-16T17:56:18.0055812Z shell: /usr/local/bin/Rscript {0} 2021-05-16T17:56:18.0056195Z env: 2021-05-16T17:56:18.0056611Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:56:18.0057045Z TIC_DEPLOY_KEY: 2021-05-16T17:56:18.0057813Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:56:18.0059322Z GITHUB_PAT: *** 2021-05-16T17:56:18.0059685Z COVERALLS_TOKEN: 2021-05-16T17:56:18.0060135Z continue-on-error: true 2021-05-16T17:56:18.0060556Z VDIFFR_RUN_TESTS: 2021-05-16T17:56:18.0061005Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:56:18.0061402Z TZ: UTC 2021-05-16T17:56:18.0061770Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:56:18.0062183Z NOT_CRAN: true 2021-05-16T17:56:18.0062518Z ##[endgroup] 2021-05-16T17:56:18.4580283Z ─ Session info ─────────────────────────────────────────────────────────────────────────────────── 2021-05-16T17:56:18.4581010Z setting value 2021-05-16T17:56:18.4581971Z version R Under development (unstable) (2021-05-14 r80296) 2021-05-16T17:56:18.4582667Z os Ubuntu 20.04.2 LTS 2021-05-16T17:56:18.4583472Z system x86_64, linux-gnu 2021-05-16T17:56:18.4584410Z ui X11 2021-05-16T17:56:18.4584963Z language (EN) 2021-05-16T17:56:18.4585794Z collate C.UTF-8 2021-05-16T17:56:18.4586562Z ctype C.UTF-8 2021-05-16T17:56:18.4587147Z tz UTC 2021-05-16T17:56:18.4587876Z date 2021-05-16 2021-05-16T17:56:18.4588188Z 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generics 0.1.0 2020-10-31 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4626685Z gert 1.3.0 2021-03-29 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4627565Z gh 1.3.0 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4628544Z ghtravis 0.15.1 2021-05-16 [1] Github (muschellij2/ghtravis@0b26809) 2021-05-16T17:56:18.4629538Z git2r 0.28.0 2021-01-10 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4630420Z gitcreds 0.1.1 2020-12-04 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4631313Z glue 1.4.2 2020-08-27 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4632194Z graphics * 4.2.0 2021-05-15 [2] local 2021-05-16T17:56:18.4633123Z grDevices * 4.2.0 2021-05-15 [2] local 2021-05-16T17:56:18.4634021Z grid 4.2.0 2021-05-15 [2] local 2021-05-16T17:56:18.4634887Z highr 0.9 2021-04-16 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4635887Z htmltools 0.5.1.1 2021-01-22 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4636829Z htmlwidgets 1.5.3 2020-12-10 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4637760Z httpuv 1.6.1 2021-05-07 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4638651Z httr 1.4.2 2020-07-20 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4639502Z ini 0.3.1 2018-05-20 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4640398Z jquerylib 0.1.4 2021-04-26 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4641305Z jsonlite 1.7.2 2020-12-09 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4642248Z KernSmooth 2.23-20 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-16T17:56:18.4643166Z knitr 1.33 2021-04-24 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4644044Z later 1.2.0 2021-04-23 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4644945Z lattice 0.20-44 2021-05-02 [2] CRAN (R 4.2.0) 2021-05-16T17:56:18.4645839Z lazyeval 0.2.2 2019-03-15 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4646758Z lifecycle 1.0.0 2021-02-15 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4647683Z magrittr 2.0.1 2020-11-17 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4648742Z manipulateWidget 0.10.1 2020-02-24 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4649724Z markdown 1.1 2019-08-07 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4650606Z MASS 7.3-54 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-16T17:56:18.4651493Z Matrix 1.3-3 2021-05-04 [2] CRAN (R 4.2.0) 2021-05-16T17:56:18.4652384Z memoise 2.0.0 2021-01-26 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4653297Z methods * 4.2.0 2021-05-15 [2] local 2021-05-16T17:56:18.4654305Z mgcv 1.8-35 2021-04-18 [2] CRAN (R 4.2.0) 2021-05-16T17:56:18.4655174Z mime 0.10 2021-02-13 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4656061Z miniUI 0.1.1.1 2018-05-18 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4656955Z misc3d 0.9-0 2020-09-06 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4657853Z nlme 3.1-152 2021-02-04 [2] CRAN (R 4.2.0) 2021-05-16T17:56:18.4660938Z nnet 7.3-16 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-16T17:56:18.4661895Z openssl 1.4.4 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4662950Z oro.nifti 0.10.3 2021-05-16 [1] Github (neuroconductor/oro.nifti@bd06b05) 2021-05-16T17:56:18.4663975Z parallel 4.2.0 2021-05-15 [2] local 2021-05-16T17:56:18.4664891Z pillar 1.6.1 2021-05-16 [1] CRAN (R 4.2.0) 2021-05-16T17:56:18.4665803Z pkgbuild 1.2.0 2020-12-15 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4666712Z pkgconfig 2.0.3 2019-09-22 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4667632Z pkgload 1.2.1 2021-04-06 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4668526Z praise 1.0.0 2015-08-11 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4669456Z prettyunits 1.1.1 2020-01-24 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4670474Z processx 3.5.2 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4671414Z promises 1.2.0.1 2021-02-11 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4672308Z ps 1.6.0 2021-02-28 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4673168Z purrr 0.3.4 2020-04-17 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4674040Z R6 2.5.0 2020-10-28 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4674922Z rappdirs 0.3.3 2021-01-31 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4675857Z rcmdcheck 1.3.3 2019-05-07 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4676776Z Rcpp 1.0.6 2021-01-15 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4677668Z rematch2 2.1.2 2020-05-01 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4678651Z remotes 2.3.0 2021-04-01 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4679410Z rex 1.2.0 2020-04-21 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4680167Z rgl 0.106.8 2021-04-23 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4680934Z rlang 0.4.11 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4681713Z rmarkdown 2.8 2021-05-07 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4682593Z RNifti 1.3.1 2021-05-13 [1] CRAN (R 4.2.0) 2021-05-16T17:56:18.4683366Z roxygen2 7.1.1 2020-06-27 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4684152Z rpart 4.1-15 2019-04-12 [2] CRAN (R 4.2.0) 2021-05-16T17:56:18.4684940Z rprojroot 2.0.2 2020-11-15 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4685743Z rstudioapi 0.13 2020-11-12 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4686547Z rticles 0.19 2021-03-04 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4687334Z rversions 2.0.2 2020-05-25 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4688118Z sass 0.4.0 2021-05-12 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4688868Z servr 0.22 2021-04-14 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4689670Z sessioninfo 1.1.1 2018-11-05 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4690463Z shiny 1.6.0 2021-01-25 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4691248Z sourcetools 0.1.7 2018-04-25 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4692067Z spatial 7.3-14 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-16T17:56:18.4692835Z splines 4.2.0 2021-05-15 [2] local 2021-05-16T17:56:18.4693607Z stats * 4.2.0 2021-05-15 [2] local 2021-05-16T17:56:18.4694548Z stats4 4.2.0 2021-05-15 [2] local 2021-05-16T17:56:18.4695319Z stringi 1.6.1 2021-05-10 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4696100Z stringr 1.4.0 2019-02-10 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4696882Z survival 3.2-11 2021-04-26 [2] CRAN (R 4.2.0) 2021-05-16T17:56:18.4697664Z sys 3.4 2020-07-23 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4698490Z sysreqs 1.0.0.9000 2021-05-16 [1] Github (r-hub/sysreqs@f068afa) 2021-05-16T17:56:18.4699373Z tcltk 4.2.0 2021-05-15 [2] local 2021-05-16T17:56:18.4700164Z testthat 3.0.2 2021-02-14 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4700940Z tibble 3.1.2 2021-05-16 [1] CRAN (R 4.2.0) 2021-05-16T17:56:18.4701751Z tic 0.10.0 2021-05-16 [1] Github (ropensci/tic@3b4dfb8) 2021-05-16T17:56:18.4702544Z tidyr 1.1.3 2021-03-03 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4703341Z tidyselect 1.1.1 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4704149Z tinytex 0.31 2021-03-30 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4704910Z tools 4.2.0 2021-05-15 [2] local 2021-05-16T17:56:18.4705684Z usethis 2.0.1 2021-02-10 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4706449Z utf8 1.2.1 2021-03-12 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4707209Z utils * 4.2.0 2021-05-15 [2] local 2021-05-16T17:56:18.4707980Z vctrs 0.3.8 2021-04-29 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4708738Z waldo 0.2.5 2021-03-08 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4709514Z webshot 0.5.2 2019-11-22 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4710375Z whisker 0.4 2019-08-28 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4711153Z withr 2.4.2 2021-04-18 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4711908Z xfun 0.23 2021-05-15 [1] CRAN (R 4.2.0) 2021-05-16T17:56:18.4712655Z xml2 1.3.2 2020-04-23 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4713425Z xopen 1.0.0 2018-09-17 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4714185Z xtable 1.8-4 2019-04-21 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4714953Z yaml 2.2.1 2020-02-01 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4715707Z zip 2.1.1 2020-08-27 [1] RSPM (R 4.2.0) 2021-05-16T17:56:18.4715990Z 2021-05-16T17:56:18.4716424Z [1] /home/runner/work/_temp/Library 2021-05-16T17:56:18.4716913Z [2] /opt/R/devel/lib/R/library 2021-05-16T17:56:18.4746207Z ##[group]Run Rscript -e 'tic::script()' 2021-05-16T17:56:18.4746736Z Rscript -e 'tic::script()' 2021-05-16T17:56:18.4747150Z ls -l check 2021-05-16T17:56:18.4790235Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-05-16T17:56:18.4790714Z env: 2021-05-16T17:56:18.4791111Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:56:18.4791552Z TIC_DEPLOY_KEY: 2021-05-16T17:56:18.4792285Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:56:18.4794242Z GITHUB_PAT: *** 2021-05-16T17:56:18.4794610Z COVERALLS_TOKEN: 2021-05-16T17:56:18.4795061Z continue-on-error: true 2021-05-16T17:56:18.4795486Z VDIFFR_RUN_TESTS: 2021-05-16T17:56:18.4795943Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:56:18.4796353Z TZ: UTC 2021-05-16T17:56:18.4796702Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:56:18.4797101Z NOT_CRAN: true 2021-05-16T17:56:18.4797437Z ##[endgroup] 2021-05-16T17:56:18.7274441Z ✔ Loading tic stage configuration from tic.R 2021-05-16T17:56:18.8463752Z Running script: step_rcmdcheck(warnings_are_errors = NULL, notes_are_errors = NULL, 2021-05-16T17:56:18.8464810Z args = args, build_args = NULL, error_on = error_on, repos = repo_default(), 2021-05-16T17:56:18.8465554Z timeout = Inf, check_dir = "check") 2021-05-16T17:56:18.9014593Z ── R CMD build ───────────────────────────────────────────────────────────────── 2021-05-16T17:56:19.1017912Z * checking for file ‘.../DESCRIPTION’ ... OK 2021-05-16T17:56:19.1221436Z * preparing ‘brainR’: 2021-05-16T17:56:19.1315702Z * checking DESCRIPTION meta-information ... OK 2021-05-16T17:56:19.1630727Z * checking for LF line-endings in source and make files and shell scripts 2021-05-16T17:56:19.1635406Z * checking for empty or unneeded directories 2021-05-16T17:56:19.1646739Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-16T17:56:19.1698702Z * building ‘brainR_1.6.0.tar.gz’ 2021-05-16T17:56:19.4630067Z 2021-05-16T17:56:19.6685693Z ── R CMD check ───────────────────────────────────────────────────────────────── 2021-05-16T17:56:19.8713535Z * using log directory ‘/home/runner/work/brainR/brainR/check/brainR.Rcheck’ 2021-05-16T17:56:19.8715867Z * using R Under development (unstable) (2021-05-14 r80296) 2021-05-16T17:56:19.8717013Z * using platform: x86_64-pc-linux-gnu (64-bit) 2021-05-16T17:56:19.8717903Z * using session charset: UTF-8 2021-05-16T17:56:20.0456071Z * using option ‘--as-cran’ 2021-05-16T17:56:20.0482951Z * checking for file ‘brainR/DESCRIPTION’ ... OK 2021-05-16T17:56:20.0483967Z * checking extension type ... Package 2021-05-16T17:56:20.0484934Z * this is package ‘brainR’ version ‘1.6.0’ 2021-05-16T17:56:20.0485789Z * package encoding: UTF-8 2021-05-16T17:56:20.0498565Z * checking package namespace information ... OK 2021-05-16T17:56:34.7174942Z * checking package dependencies ... OK 2021-05-16T17:56:34.7184087Z * checking if this is a source package ... OK 2021-05-16T17:56:34.7185234Z * checking if there is a namespace ... OK 2021-05-16T17:56:34.8288425Z * checking for executable files ... OK 2021-05-16T17:56:34.8289526Z * checking for hidden files and directories ... OK 2021-05-16T17:56:34.8294763Z * checking for portable file names ... OK 2021-05-16T17:56:34.8299078Z * checking for sufficient/correct file permissions ... OK 2021-05-16T17:56:34.8315490Z * checking serialization versions ... OK 2021-05-16T17:56:38.8715255Z * checking whether package ‘brainR’ can be installed ... WARNING 2021-05-16T17:56:38.8717212Z ##[warning]Found the following significant warnings: 2021-05-16T17:56:38.8719376Z Warning: 'rgl.init' failed, running with 'rgl.useNULL = TRUE'. 2021-05-16T17:56:38.8720509Z Warning: no DISPLAY variable so Tk is not available 2021-05-16T17:56:38.8721703Z See ‘/home/runner/work/brainR/brainR/check/brainR.Rcheck/00install.out’ for details. 2021-05-16T17:56:38.8767789Z * checking installed package size ... OK 2021-05-16T17:56:38.9565581Z * checking package directory ... OK 2021-05-16T17:56:38.9566429Z * checking for future file timestamps ... OK 2021-05-16T17:56:39.1056551Z * checking DESCRIPTION meta-information ... OK 2021-05-16T17:56:39.1122797Z * checking top-level files ... OK 2021-05-16T17:56:39.1123899Z * checking for left-over files ... OK 2021-05-16T17:56:39.1136767Z * checking index information ... OK 2021-05-16T17:56:39.2155515Z * checking package subdirectories ... OK 2021-05-16T17:56:39.2576055Z * checking R files for non-ASCII characters ... OK 2021-05-16T17:56:39.3043361Z * checking R files for syntax errors ... OK 2021-05-16T17:56:40.1563974Z * checking whether the package can be loaded ... OK 2021-05-16T17:56:40.9533525Z * checking whether the package can be loaded with stated dependencies ... OK 2021-05-16T17:56:41.7475346Z * checking whether the package can be unloaded cleanly ... OK 2021-05-16T17:56:42.5525796Z * checking whether the namespace can be loaded with stated dependencies ... OK 2021-05-16T17:56:43.4195339Z * checking whether the namespace can be unloaded cleanly ... OK 2021-05-16T17:56:44.3117201Z * checking loading without being on the library search path ... OK 2021-05-16T17:56:45.1776247Z * checking dependencies in R code ... OK 2021-05-16T17:56:46.6678999Z * checking S3 generic/method consistency ... OK 2021-05-16T17:56:47.4821182Z * checking replacement functions ... OK 2021-05-16T17:56:48.3696460Z * checking foreign function calls ... OK 2021-05-16T17:56:54.4367787Z * checking R code for possible problems ... OK 2021-05-16T17:56:54.6250823Z * checking Rd files ... OK 2021-05-16T17:56:54.6687145Z * checking Rd metadata ... OK 2021-05-16T17:56:54.7315101Z * checking Rd line widths ... OK 2021-05-16T17:56:54.8270087Z * checking Rd cross-references ... OK 2021-05-16T17:56:55.6616612Z * checking for missing documentation entries ... OK 2021-05-16T17:56:58.1234929Z * checking for code/documentation mismatches ... OK 2021-05-16T17:56:59.7561100Z * checking Rd \usage sections ... OK 2021-05-16T17:56:59.8285056Z * checking Rd contents ... OK 2021-05-16T17:56:59.9183292Z * checking for unstated dependencies in examples ... OK 2021-05-16T17:57:02.2910429Z * checking examples ... OK 2021-05-16T17:57:04.0838001Z * checking PDF version of manual ... OK 2021-05-16T17:57:04.0839759Z * checking for non-standard things in the check directory ... OK 2021-05-16T17:57:04.0840718Z * checking for detritus in the temp directory ... OK 2021-05-16T17:57:04.0841350Z * DONE 2021-05-16T17:57:04.0857506Z 2021-05-16T17:57:04.0858034Z Status: 1 WARNING 2021-05-16T17:57:04.0858479Z See 2021-05-16T17:57:04.0859497Z ‘/home/runner/work/brainR/brainR/check/brainR.Rcheck/00check.log’ 2021-05-16T17:57:04.0860190Z for details. 2021-05-16T17:57:04.0860538Z 2021-05-16T17:57:04.0860835Z 2021-05-16T17:57:04.1675351Z ── R CMD check results ─────────────────────────────────────── brainR 1.6.0 ──── 2021-05-16T17:57:04.1689877Z Duration: 44.7s 2021-05-16T17:57:04.1690425Z 2021-05-16T17:57:04.1715242Z ❯ checking whether package ‘brainR’ can be installed ... WARNING 2021-05-16T17:57:04.1717228Z ##[warning] See below... 2021-05-16T17:57:04.1723256Z 2021-05-16T17:57:04.1724574Z 0 errors ✔ | 1 warning ✖ | 0 notes ✔ 2021-05-16T17:57:04.1815325Z total 7640 2021-05-16T17:57:04.1816723Z drwxr-xr-x 5 runner docker 4096 May 16 17:57 brainR.Rcheck 2021-05-16T17:57:04.1818478Z -rw-r--r-- 1 runner docker 3884849 May 16 17:56 brainR_1.6.0.tar.gz 2021-05-16T17:57:04.1820112Z -rw-r--r-- 1 runner docker 3928143 May 16 17:56 brainR_1.6.0_R_x86_64-pc-linux-gnu.tar.gz 2021-05-16T17:57:04.1850352Z ##[group]Run find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-05-16T17:57:04.1851081Z find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-05-16T17:57:04.1894594Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-05-16T17:57:04.1895085Z env: 2021-05-16T17:57:04.1895498Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:57:04.1895921Z TIC_DEPLOY_KEY: 2021-05-16T17:57:04.1896728Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:57:04.1898543Z GITHUB_PAT: *** 2021-05-16T17:57:04.1898946Z COVERALLS_TOKEN: 2021-05-16T17:57:04.1899462Z continue-on-error: true 2021-05-16T17:57:04.1914137Z VDIFFR_RUN_TESTS: 2021-05-16T17:57:04.1914619Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:57:04.1915039Z TZ: UTC 2021-05-16T17:57:04.1915395Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:57:04.1915763Z NOT_CRAN: true 2021-05-16T17:57:04.1916106Z ##[endgroup] 2021-05-16T17:57:04.2033439Z ##[group]Run Rscript -e "tic::before_deploy()" 2021-05-16T17:57:04.2033991Z Rscript -e "tic::before_deploy()" 2021-05-16T17:57:04.2069829Z shell: /usr/bin/bash -e {0} 2021-05-16T17:57:04.2070175Z env: 2021-05-16T17:57:04.2070584Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:57:04.2071018Z TIC_DEPLOY_KEY: 2021-05-16T17:57:04.2071747Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:57:04.2072921Z GITHUB_PAT: *** 2021-05-16T17:57:04.2073283Z COVERALLS_TOKEN: 2021-05-16T17:57:04.2073724Z continue-on-error: true 2021-05-16T17:57:04.2074144Z VDIFFR_RUN_TESTS: 2021-05-16T17:57:04.2074591Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:57:04.2075002Z TZ: UTC 2021-05-16T17:57:04.2075347Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:57:04.2075725Z NOT_CRAN: true 2021-05-16T17:57:04.2076057Z ##[endgroup] 2021-05-16T17:57:04.5674115Z ✔ Loading tic stage configuration from tic.R 2021-05-16T17:57:04.5716752Z ##[group]Run actions/upload-release-asset@v1.0.1 2021-05-16T17:57:04.5717274Z with: 2021-05-16T17:57:04.5718030Z upload_url: https://uploads.github.com/repos/neuroconductor/brainR/releases/43017669/assets{?name,label} 2021-05-16T17:57:04.5718966Z asset_path: check/brainR_1.6.0_R_x86_64-pc-linux-gnu.tar.gz 2021-05-16T17:57:04.5719594Z asset_name: brainR_1.6.0_R_x86_64-pc-linux-gnu_R4.1.tar.gz 2021-05-16T17:57:04.5720201Z asset_content_type: application/octet-stream 2021-05-16T17:57:04.5720665Z env: 2021-05-16T17:57:04.5721178Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:57:04.5721621Z TIC_DEPLOY_KEY: 2021-05-16T17:57:04.5722344Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:57:04.5723551Z GITHUB_PAT: *** 2021-05-16T17:57:04.5723911Z COVERALLS_TOKEN: 2021-05-16T17:57:04.5724363Z continue-on-error: true 2021-05-16T17:57:04.5724784Z VDIFFR_RUN_TESTS: 2021-05-16T17:57:04.5725255Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:57:04.5725655Z TZ: UTC 2021-05-16T17:57:04.5726015Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:57:04.5726389Z NOT_CRAN: true 2021-05-16T17:57:04.5727117Z GITHUB_TOKEN: *** 2021-05-16T17:57:04.5727469Z ##[endgroup] 2021-05-16T17:57:05.2740438Z ##[group]Run Rscript -e "tic::deploy()" 2021-05-16T17:57:05.2740922Z Rscript -e "tic::deploy()" 2021-05-16T17:57:05.2782809Z shell: /usr/bin/bash -e {0} 2021-05-16T17:57:05.2783179Z env: 2021-05-16T17:57:05.2783589Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:57:05.2784020Z TIC_DEPLOY_KEY: 2021-05-16T17:57:05.2784768Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:57:05.2786008Z GITHUB_PAT: *** 2021-05-16T17:57:05.2786381Z COVERALLS_TOKEN: 2021-05-16T17:57:05.2786814Z continue-on-error: true 2021-05-16T17:57:05.2787248Z VDIFFR_RUN_TESTS: 2021-05-16T17:57:05.2787683Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:57:05.2788094Z TZ: UTC 2021-05-16T17:57:05.2788453Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:57:05.2788818Z NOT_CRAN: true 2021-05-16T17:57:05.2789163Z ##[endgroup] 2021-05-16T17:57:05.5286814Z ✔ Loading tic stage configuration from tic.R 2021-05-16T17:57:05.6461419Z ##[group]Run Rscript -e "tic::after_deploy()" 2021-05-16T17:57:05.6462044Z Rscript -e "tic::after_deploy()" 2021-05-16T17:57:05.6504849Z shell: /usr/bin/bash -e {0} 2021-05-16T17:57:05.6505227Z env: 2021-05-16T17:57:05.6505644Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T17:57:05.6506076Z TIC_DEPLOY_KEY: 2021-05-16T17:57:05.6506845Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T17:57:05.6508576Z GITHUB_PAT: *** 2021-05-16T17:57:05.6508951Z COVERALLS_TOKEN: 2021-05-16T17:57:05.6509382Z continue-on-error: true 2021-05-16T17:57:05.6509815Z VDIFFR_RUN_TESTS: 2021-05-16T17:57:05.6510247Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T17:57:05.6510655Z TZ: UTC 2021-05-16T17:57:05.6511017Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T17:57:05.6511388Z NOT_CRAN: true 2021-05-16T17:57:05.6511734Z ##[endgroup] 2021-05-16T17:57:05.9094633Z ✔ Loading tic stage configuration from tic.R 2021-05-16T17:57:06.8269285Z Post job cleanup. 2021-05-16T17:57:06.8669269Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-05-16T17:57:06.8746934Z Post job cleanup. 2021-05-16T17:57:06.9618988Z [command]/usr/bin/git version 2021-05-16T17:57:06.9670495Z git version 2.31.1 2021-05-16T17:57:06.9701296Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-05-16T17:57:06.9740477Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-05-16T17:57:06.9969913Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-05-16T17:57:06.9999902Z http.https://github.com/.extraheader 2021-05-16T17:57:07.0008482Z [command]/usr/bin/git config --local --unset-all http.https://github.com/.extraheader 2021-05-16T17:57:07.0045328Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-05-16T17:57:07.0324972Z Cleaning up orphan processes