2021-05-15T22:34:13.9335700Z ##[section]Starting: Request a runner to run this job 2021-05-15T22:34:14.4291528Z Can't find any online and idle self-hosted runner in current repository that matches the required labels: 'ubuntu-20.04' 2021-05-15T22:34:14.5144652Z Can't find any online and idle self-hosted runner in current repository's organization/enterprise account that matches the required labels: 'ubuntu-20.04' 2021-05-15T22:34:14.6250448Z Found online and idle hosted runner in current repository's enterprise account that matches the required labels: 'ubuntu-20.04' 2021-05-15T22:34:14.7437263Z ##[section]Finishing: Request a runner to run this job 2021-05-15T22:34:21.4235276Z Current runner version: '2.278.0' 2021-05-15T22:34:21.4259336Z ##[group]Operating System 2021-05-15T22:34:21.4260246Z Ubuntu 2021-05-15T22:34:21.4260767Z 20.04.2 2021-05-15T22:34:21.4261221Z LTS 2021-05-15T22:34:21.4261641Z ##[endgroup] 2021-05-15T22:34:21.4262197Z ##[group]Virtual Environment 2021-05-15T22:34:21.4262766Z Environment: ubuntu-20.04 2021-05-15T22:34:21.4263326Z Version: 20210510.0 2021-05-15T22:34:21.4264293Z Included Software: https://github.com/actions/virtual-environments/blob/ubuntu20/20210510.0/images/linux/Ubuntu2004-README.md 2021-05-15T22:34:21.4265524Z Image Release: https://github.com/actions/virtual-environments/releases/tag/ubuntu20%2F20210510.0 2021-05-15T22:34:21.4266567Z ##[endgroup] 2021-05-15T22:34:21.4268310Z ##[group]GITHUB_TOKEN Permissions 2021-05-15T22:34:21.4269423Z Actions: write 2021-05-15T22:34:21.4269963Z Checks: write 2021-05-15T22:34:21.4270419Z Contents: write 2021-05-15T22:34:21.4270948Z Deployments: write 2021-05-15T22:34:21.4271540Z Issues: write 2021-05-15T22:34:21.4272062Z Metadata: read 2021-05-15T22:34:21.4272539Z Packages: write 2021-05-15T22:34:21.4273074Z PullRequests: write 2021-05-15T22:34:21.4273658Z RepositoryProjects: write 2021-05-15T22:34:21.4274286Z SecurityEvents: write 2021-05-15T22:34:21.4274921Z Statuses: write 2021-05-15T22:34:21.4275389Z ##[endgroup] 2021-05-15T22:34:21.4277833Z Prepare workflow directory 2021-05-15T22:34:21.5214043Z Prepare all required actions 2021-05-15T22:34:21.5222747Z Getting action download info 2021-05-15T22:34:21.8983830Z Download action repository 'actions/checkout@v2' 2021-05-15T22:34:23.6205208Z Download action repository 'r-lib/actions@master' 2021-05-15T22:34:24.1699756Z Download action repository 'adigherman/actions@master' 2021-05-15T22:34:26.4852637Z Download action repository 'msys2/setup-msys2@v2' 2021-05-15T22:34:26.7437767Z Download action repository 'actions/cache@v1' 2021-05-15T22:34:26.9792159Z Download action repository 'actions/upload-artifact@master' 2021-05-15T22:34:27.1321727Z Download action repository 'actions/upload-release-asset@v1.0.1' 2021-05-15T22:34:27.4617283Z ##[group]Run actions/checkout@v2 2021-05-15T22:34:27.4617760Z with: 2021-05-15T22:34:27.4618115Z repository: neuroconductor/sri24 2021-05-15T22:34:27.4619085Z token: *** 2021-05-15T22:34:27.4619557Z ssh-strict: true 2021-05-15T22:34:27.4620194Z persist-credentials: true 2021-05-15T22:34:27.4620692Z clean: true 2021-05-15T22:34:27.4621263Z fetch-depth: 1 2021-05-15T22:34:27.4621696Z lfs: false 2021-05-15T22:34:27.4622161Z submodules: false 2021-05-15T22:34:27.4622645Z env: 2021-05-15T22:34:27.4623124Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:34:27.4623651Z TIC_DEPLOY_KEY: 2021-05-15T22:34:27.4624551Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:34:27.4625891Z GITHUB_PAT: *** 2021-05-15T22:34:27.4626517Z COVERALLS_TOKEN: 2021-05-15T22:34:27.4627048Z continue-on-error: true 2021-05-15T22:34:27.4627578Z VDIFFR_RUN_TESTS: 2021-05-15T22:34:27.4628001Z ##[endgroup] 2021-05-15T22:34:27.7250155Z Syncing repository: neuroconductor/sri24 2021-05-15T22:34:27.7251135Z ##[group]Getting Git version info 2021-05-15T22:34:27.7252298Z Working directory is '/home/runner/work/sri24/sri24' 2021-05-15T22:34:27.7275756Z [command]/usr/bin/git version 2021-05-15T22:34:27.7442019Z git version 2.31.1 2021-05-15T22:34:27.7461875Z ##[endgroup] 2021-05-15T22:34:27.7472624Z Deleting the contents of '/home/runner/work/sri24/sri24' 2021-05-15T22:34:27.7481094Z ##[group]Initializing the repository 2021-05-15T22:34:27.7486184Z [command]/usr/bin/git init /home/runner/work/sri24/sri24 2021-05-15T22:34:27.7577174Z hint: Using 'master' as the name for the initial branch. This default branch name 2021-05-15T22:34:27.7578160Z hint: is subject to change. To configure the initial branch name to use in all 2021-05-15T22:34:27.7579789Z hint: of your new repositories, which will suppress this warning, call: 2021-05-15T22:34:27.7580452Z hint: 2021-05-15T22:34:27.7581306Z hint: git config --global init.defaultBranch 2021-05-15T22:34:27.7582183Z hint: 2021-05-15T22:34:27.7582968Z hint: Names commonly chosen instead of 'master' are 'main', 'trunk' and 2021-05-15T22:34:27.7584338Z hint: 'development'. The just-created branch can be renamed via this command: 2021-05-15T22:34:27.7585012Z hint: 2021-05-15T22:34:27.7585629Z hint: git branch -m 2021-05-15T22:34:28.6182783Z Initialized empty Git repository in /home/runner/work/sri24/sri24/.git/ 2021-05-15T22:34:28.6194089Z [command]/usr/bin/git remote add origin https://github.com/neuroconductor/sri24 2021-05-15T22:34:28.6195869Z ##[endgroup] 2021-05-15T22:34:28.6197011Z ##[group]Disabling automatic garbage collection 2021-05-15T22:34:28.6198998Z [command]/usr/bin/git config --local gc.auto 0 2021-05-15T22:34:28.6200161Z ##[endgroup] 2021-05-15T22:34:28.6202925Z ##[group]Setting up auth 2021-05-15T22:34:28.6204792Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-05-15T22:34:28.6206204Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-05-15T22:34:28.6207765Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-05-15T22:34:28.6209673Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-05-15T22:34:28.6211568Z [command]/usr/bin/git config --local http.https://github.com/.extraheader AUTHORIZATION: basic *** 2021-05-15T22:34:28.6212381Z ##[endgroup] 2021-05-15T22:34:28.6213042Z ##[group]Fetching the repository 2021-05-15T22:34:28.6214850Z [command]/usr/bin/git -c protocol.version=2 fetch --no-tags --prune --progress --no-recurse-submodules --depth=1 origin +e2d445a31137041ae899cbe74f8332abb76762ed:refs/tags/0.1.2.s 2021-05-15T22:34:28.6216107Z remote: Enumerating objects: 54, done. 2021-05-15T22:34:28.6216906Z remote: Counting objects: 1% (1/54) 2021-05-15T22:34:28.6217472Z remote: Counting objects: 3% (2/54) 2021-05-15T22:34:28.6218012Z remote: Counting objects: 5% (3/54) 2021-05-15T22:34:28.6218565Z remote: Counting objects: 7% (4/54) 2021-05-15T22:34:28.6219118Z remote: Counting objects: 9% (5/54) 2021-05-15T22:34:28.6219656Z remote: Counting objects: 11% (6/54) 2021-05-15T22:34:28.6220215Z remote: Counting objects: 12% (7/54) 2021-05-15T22:34:28.6220877Z remote: Counting objects: 14% (8/54) 2021-05-15T22:34:28.6221482Z remote: Counting objects: 16% (9/54) 2021-05-15T22:34:28.6221950Z remote: Counting objects: 18% (10/54) 2021-05-15T22:34:28.6222441Z remote: Counting objects: 20% (11/54) 2021-05-15T22:34:28.6223107Z remote: Counting objects: 22% (12/54) 2021-05-15T22:34:28.6223647Z remote: Counting objects: 24% (13/54) 2021-05-15T22:34:28.6224206Z remote: Counting objects: 25% (14/54) 2021-05-15T22:34:28.6224745Z remote: Counting objects: 27% (15/54) 2021-05-15T22:34:28.6225396Z remote: Counting objects: 29% (16/54) 2021-05-15T22:34:28.6225870Z remote: Counting objects: 31% (17/54) 2021-05-15T22:34:28.6226562Z remote: Counting objects: 33% (18/54) 2021-05-15T22:34:28.6227030Z remote: Counting objects: 35% (19/54) 2021-05-15T22:34:28.6227510Z remote: Counting objects: 37% (20/54) 2021-05-15T22:34:28.6227996Z remote: Counting objects: 38% (21/54) 2021-05-15T22:34:28.6228467Z remote: Counting objects: 40% (22/54) 2021-05-15T22:34:28.6228950Z remote: Counting objects: 42% (23/54) 2021-05-15T22:34:28.6229418Z remote: Counting objects: 44% (24/54) 2021-05-15T22:34:28.6230077Z remote: Counting objects: 46% (25/54) 2021-05-15T22:34:28.6230619Z remote: Counting objects: 48% (26/54) 2021-05-15T22:34:28.6231167Z remote: Counting objects: 50% (27/54) 2021-05-15T22:34:28.6231830Z remote: Counting objects: 51% (28/54) 2021-05-15T22:34:28.6232428Z remote: Counting objects: 53% (29/54) 2021-05-15T22:34:28.6232981Z remote: Counting objects: 55% (30/54) 2021-05-15T22:34:28.6233516Z remote: Counting objects: 57% (31/54) 2021-05-15T22:34:28.6234064Z remote: Counting objects: 59% (32/54) 2021-05-15T22:34:28.6234601Z remote: Counting objects: 61% (33/54) 2021-05-15T22:34:28.6235252Z remote: Counting objects: 62% (34/54) 2021-05-15T22:34:28.6235722Z remote: Counting objects: 64% (35/54) 2021-05-15T22:34:28.6236210Z remote: Counting objects: 66% (36/54) 2021-05-15T22:34:28.6236878Z remote: Counting objects: 68% (37/54) 2021-05-15T22:34:28.6237427Z remote: Counting objects: 70% (38/54) 2021-05-15T22:34:28.6237962Z remote: Counting objects: 72% (39/54) 2021-05-15T22:34:28.6238509Z remote: Counting objects: 74% (40/54) 2021-05-15T22:34:28.6239086Z remote: Counting objects: 75% (41/54) 2021-05-15T22:34:28.6239619Z remote: Counting objects: 77% (42/54) 2021-05-15T22:34:28.6240169Z remote: Counting objects: 79% (43/54) 2021-05-15T22:34:28.6240699Z remote: Counting objects: 81% (44/54) 2021-05-15T22:34:28.6241244Z remote: Counting objects: 83% (45/54) 2021-05-15T22:34:28.6241778Z remote: Counting objects: 85% (46/54) 2021-05-15T22:34:28.6242324Z remote: Counting objects: 87% (47/54) 2021-05-15T22:34:28.6242941Z remote: Counting objects: 88% (48/54) 2021-05-15T22:34:28.6243424Z remote: Counting objects: 90% (49/54) 2021-05-15T22:34:28.6243904Z remote: Counting objects: 92% (50/54) 2021-05-15T22:34:28.6244370Z remote: Counting objects: 94% (51/54) 2021-05-15T22:34:28.6244845Z remote: Counting objects: 96% (52/54) 2021-05-15T22:34:28.6245307Z remote: Counting objects: 98% (53/54) 2021-05-15T22:34:28.6245784Z remote: Counting objects: 100% (54/54) 2021-05-15T22:34:28.6246338Z remote: Counting objects: 100% (54/54), done. 2021-05-15T22:34:28.6246873Z remote: Compressing objects: 2% (1/50) 2021-05-15T22:34:28.6247389Z remote: Compressing objects: 4% (2/50) 2021-05-15T22:34:28.6247910Z remote: Compressing objects: 6% (3/50) 2021-05-15T22:34:28.6248441Z remote: Compressing objects: 8% (4/50) 2021-05-15T22:34:28.6248953Z remote: Compressing objects: 10% (5/50) 2021-05-15T22:34:28.6249476Z remote: Compressing objects: 12% (6/50) 2021-05-15T22:34:28.6249991Z remote: Compressing objects: 14% (7/50) 2021-05-15T22:34:28.6250516Z remote: Compressing objects: 16% (8/50) 2021-05-15T22:34:28.6251104Z remote: Compressing objects: 18% (9/50) 2021-05-15T22:34:28.6251564Z remote: Compressing objects: 20% (10/50) 2021-05-15T22:34:28.6252010Z remote: Compressing objects: 22% (11/50) 2021-05-15T22:34:28.6252468Z remote: Compressing objects: 24% (12/50) 2021-05-15T22:34:28.6252926Z remote: Compressing objects: 26% (13/50) 2021-05-15T22:34:28.6253373Z remote: Compressing objects: 28% (14/50) 2021-05-15T22:34:28.6253827Z remote: Compressing objects: 30% (15/50) 2021-05-15T22:34:28.6254263Z remote: Compressing objects: 32% (16/50) 2021-05-15T22:34:28.6254728Z remote: Compressing objects: 34% (17/50) 2021-05-15T22:34:28.6255182Z remote: Compressing objects: 36% (18/50) 2021-05-15T22:34:28.6255624Z remote: Compressing objects: 38% (19/50) 2021-05-15T22:34:28.6257538Z remote: Compressing objects: 40% (20/50) 2021-05-15T22:34:28.6258221Z remote: Compressing objects: 42% (21/50) 2021-05-15T22:34:28.6258877Z remote: Compressing objects: 44% (22/50) 2021-05-15T22:34:28.6259507Z remote: Compressing objects: 46% (23/50) 2021-05-15T22:34:28.6260157Z remote: Compressing objects: 48% (24/50) 2021-05-15T22:34:28.6260788Z remote: Compressing objects: 50% (25/50) 2021-05-15T22:34:28.6261588Z remote: Compressing objects: 52% (26/50) 2021-05-15T22:34:28.6262237Z remote: Compressing objects: 54% (27/50) 2021-05-15T22:34:28.6262872Z remote: Compressing objects: 56% (28/50) 2021-05-15T22:34:28.6263531Z remote: Compressing objects: 58% (29/50) 2021-05-15T22:34:28.6264160Z remote: Compressing objects: 60% (30/50) 2021-05-15T22:34:28.6264805Z remote: Compressing objects: 62% (31/50) 2021-05-15T22:34:28.6265435Z remote: Compressing objects: 64% (32/50) 2021-05-15T22:34:28.6266396Z remote: Compressing objects: 66% (33/50) 2021-05-15T22:34:28.6267043Z remote: Compressing objects: 68% (34/50) 2021-05-15T22:34:28.6267692Z remote: Compressing objects: 70% (35/50) 2021-05-15T22:34:28.6268552Z remote: Compressing objects: 72% (36/50) 2021-05-15T22:34:28.6268995Z remote: Compressing objects: 74% (37/50) 2021-05-15T22:34:28.6269450Z remote: Compressing objects: 76% (38/50) 2021-05-15T22:34:28.6269901Z remote: Compressing objects: 78% (39/50) 2021-05-15T22:34:28.6270366Z remote: Compressing objects: 80% (40/50) 2021-05-15T22:34:28.6270808Z remote: Compressing objects: 82% (41/50) 2021-05-15T22:34:28.6271263Z remote: Compressing objects: 84% (42/50) 2021-05-15T22:34:28.6271705Z remote: Compressing objects: 86% (43/50) 2021-05-15T22:34:28.6272159Z remote: Compressing objects: 88% (44/50) 2021-05-15T22:34:28.6272615Z remote: Compressing objects: 90% (45/50) 2021-05-15T22:34:28.6273055Z remote: Compressing objects: 92% (46/50) 2021-05-15T22:34:28.6273504Z remote: Compressing objects: 94% (47/50) 2021-05-15T22:34:28.6273945Z remote: Compressing objects: 96% (48/50) 2021-05-15T22:34:28.6274397Z remote: Compressing objects: 98% (49/50) 2021-05-15T22:34:28.6274839Z remote: Compressing objects: 100% (50/50) 2021-05-15T22:34:28.6275312Z remote: Compressing objects: 100% (50/50), done. 2021-05-15T22:34:31.1581831Z remote: Total 54 (delta 1), reused 42 (delta 0), pack-reused 0 2021-05-15T22:34:31.1749417Z From https://github.com/neuroconductor/sri24 2021-05-15T22:34:31.1751516Z * [new ref] e2d445a31137041ae899cbe74f8332abb76762ed -> 0.1.2.s 2021-05-15T22:34:31.1802605Z ##[endgroup] 2021-05-15T22:34:31.1804302Z ##[group]Determining the checkout info 2021-05-15T22:34:31.1805832Z ##[endgroup] 2021-05-15T22:34:31.1808116Z ##[group]Checking out the ref 2021-05-15T22:34:31.1810527Z [command]/usr/bin/git checkout --progress --force refs/tags/0.1.2.s 2021-05-15T22:34:31.3743683Z Note: switching to 'refs/tags/0.1.2.s'. 2021-05-15T22:34:31.3750692Z 2021-05-15T22:34:31.3754313Z You are in 'detached HEAD' state. You can look around, make experimental 2021-05-15T22:34:31.3756878Z changes and commit them, and you can discard any commits you make in this 2021-05-15T22:34:31.3759286Z state without impacting any branches by switching back to a branch. 2021-05-15T22:34:31.3761022Z 2021-05-15T22:34:31.3762892Z If you want to create a new branch to retain commits you create, you may 2021-05-15T22:34:31.3765230Z do so (now or later) by using -c with the switch command. Example: 2021-05-15T22:34:31.3766055Z 2021-05-15T22:34:31.3767049Z git switch -c 2021-05-15T22:34:31.3767816Z 2021-05-15T22:34:31.3770763Z Or undo this operation with: 2021-05-15T22:34:31.3771227Z 2021-05-15T22:34:31.3771995Z git switch - 2021-05-15T22:34:31.3772357Z 2021-05-15T22:34:31.3773077Z Turn off this advice by setting config variable advice.detachedHead to false 2021-05-15T22:34:31.3773662Z 2021-05-15T22:34:31.3774139Z HEAD is now at e2d445a Version id 48 stable 2021-05-15T22:34:31.3774879Z ##[endgroup] 2021-05-15T22:34:31.3836382Z [command]/usr/bin/git log -1 --format='%H' 2021-05-15T22:34:31.3873169Z 'e2d445a31137041ae899cbe74f8332abb76762ed' 2021-05-15T22:34:31.4016891Z ##[group]Run r-lib/actions/setup-r@master 2021-05-15T22:34:31.4017303Z with: 2021-05-15T22:34:31.4017754Z r-version: devel 2021-05-15T22:34:31.4018084Z Ncpus: 1 2021-05-15T22:34:31.4018464Z crayon.enabled: NULL 2021-05-15T22:34:31.4019242Z remove-openmp-macos: true 2021-05-15T22:34:31.4019983Z http-user-agent: default 2021-05-15T22:34:31.4020463Z install-r: true 2021-05-15T22:34:31.4021045Z windows-path-include-mingw: true 2021-05-15T22:34:31.4021609Z env: 2021-05-15T22:34:31.4022047Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:34:31.4022529Z TIC_DEPLOY_KEY: 2021-05-15T22:34:31.4023362Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:34:31.4025210Z GITHUB_PAT: *** 2021-05-15T22:34:31.4025621Z COVERALLS_TOKEN: 2021-05-15T22:34:31.4026525Z continue-on-error: true 2021-05-15T22:34:31.4027056Z VDIFFR_RUN_TESTS: 2021-05-15T22:34:31.4027481Z ##[endgroup] 2021-05-15T22:34:33.1044156Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive add-apt-repository -y ppa:cran/travis 2021-05-15T22:34:34.7781800Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-05-15T22:34:34.7783858Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease [114 kB] 2021-05-15T22:34:34.7931817Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease [101 kB] 2021-05-15T22:34:34.7950483Z Get:4 http://security.ubuntu.com/ubuntu focal-security InRelease [109 kB] 2021-05-15T22:34:34.8262505Z Get:5 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease [10.5 kB] 2021-05-15T22:34:34.8632292Z Hit:6 https://download.mono-project.com/repo/ubuntu stable-focal InRelease 2021-05-15T22:34:34.9197797Z Hit:7 http://ppa.launchpad.net/apt-fast/stable/ubuntu focal InRelease 2021-05-15T22:34:34.9977915Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 Packages [983 kB] 2021-05-15T22:34:35.0358067Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main Translation-en [222 kB] 2021-05-15T22:34:35.0383661Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 c-n-f Metadata [13.3 kB] 2021-05-15T22:34:35.0385789Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted amd64 Packages [226 kB] 2021-05-15T22:34:35.0415695Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted Translation-en [33.3 kB] 2021-05-15T22:34:35.0422614Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 Packages [774 kB] 2021-05-15T22:34:35.0586975Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe Translation-en [166 kB] 2021-05-15T22:34:35.0594639Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 c-n-f Metadata [17.4 kB] 2021-05-15T22:34:35.0776048Z Get:16 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease [18.0 kB] 2021-05-15T22:34:35.2274905Z Get:17 https://packages.microsoft.com/ubuntu/20.04/prod focal/main amd64 Packages [73.2 kB] 2021-05-15T22:34:35.3206113Z Hit:18 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-05-15T22:34:35.3297934Z Get:19 http://security.ubuntu.com/ubuntu focal-security/main amd64 Packages [655 kB] 2021-05-15T22:34:35.3951098Z Get:20 http://security.ubuntu.com/ubuntu focal-security/main Translation-en [131 kB] 2021-05-15T22:34:35.3972111Z Get:21 http://security.ubuntu.com/ubuntu focal-security/main amd64 c-n-f Metadata [7508 B] 2021-05-15T22:34:35.3974075Z Get:22 http://security.ubuntu.com/ubuntu focal-security/restricted amd64 Packages [203 kB] 2021-05-15T22:34:35.3996128Z Get:23 http://security.ubuntu.com/ubuntu focal-security/restricted Translation-en [29.7 kB] 2021-05-15T22:34:35.4001112Z Get:24 http://security.ubuntu.com/ubuntu focal-security/universe amd64 Packages [565 kB] 2021-05-15T22:34:35.4138459Z Get:25 http://security.ubuntu.com/ubuntu focal-security/universe amd64 c-n-f Metadata [11.0 kB] 2021-05-15T22:34:42.0829757Z Fetched 4463 kB in 1s (4422 kB/s) 2021-05-15T22:34:42.7453290Z Reading package lists... 2021-05-15T22:34:42.7666994Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get update -y -qq 2021-05-15T22:34:44.5211729Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get install -y gdebi-core qpdf devscripts 2021-05-15T22:34:44.5779519Z Reading package lists... 2021-05-15T22:34:44.7089196Z Building dependency tree... 2021-05-15T22:34:44.7104351Z Reading state information... 2021-05-15T22:34:44.8628685Z The following additional packages will be installed: 2021-05-15T22:34:44.8631399Z dctrl-tools diffstat dput gettext intltool-debian libapt-pkg-perl 2021-05-15T22:34:44.8633953Z libarchive-zip-perl libarray-intspan-perl libasync-mergepoint-perl 2021-05-15T22:34:44.8636916Z libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl 2021-05-15T22:34:44.8640092Z libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl 2021-05-15T22:34:44.8643006Z libcommon-sense-perl libconst-fast-perl libcontextual-return-perl 2021-05-15T22:34:44.8646508Z libcpanel-json-xs-perl libcroco3 libdata-optlist-perl 2021-05-15T22:34:44.8648066Z libdevel-callchecker-perl libdevel-size-perl libdigest-bubblebabble-perl 2021-05-15T22:34:44.8649777Z libdigest-hmac-perl libdistro-info-perl libdynaloader-functions-perl 2021-05-15T22:34:44.8651305Z libemail-valid-perl libexporter-tiny-perl libfile-chdir-perl 2021-05-15T22:34:44.8652726Z libfile-find-rule-perl libfile-homedir-perl libfile-which-perl 2021-05-15T22:34:44.8654236Z libfont-ttf-perl libfuture-perl libgetopt-long-descriptive-perl 2021-05-15T22:34:44.8655754Z libgit-wrapper-perl libgitlab-api-v4-perl libhash-fieldhash-perl 2021-05-15T22:34:44.8657437Z libhttp-tiny-multipart-perl libimport-into-perl libio-async-loop-epoll-perl 2021-05-15T22:34:44.8659175Z libio-async-perl libio-prompter-perl libio-pty-perl libio-string-perl 2021-05-15T22:34:44.8660477Z libipc-run-perl libjson-maybexs-perl libjson-perl libjson-xs-perl 2021-05-15T22:34:44.8661800Z liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl 2021-05-15T22:34:44.8663067Z liblist-someutils-perl liblist-someutils-xs-perl 2021-05-15T22:34:44.8664573Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-05-15T22:34:44.8666498Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-05-15T22:34:44.8667926Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-05-15T22:34:44.8669181Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-05-15T22:34:44.8670453Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-05-15T22:34:44.8671922Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-05-15T22:34:44.8673477Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-05-15T22:34:44.8674951Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-05-15T22:34:44.8676133Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-05-15T22:34:44.8677701Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-05-15T22:34:44.8679165Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-05-15T22:34:44.8680636Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-05-15T22:34:44.8682134Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-05-15T22:34:44.8683584Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-05-15T22:34:44.8685167Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-05-15T22:34:44.8686730Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-05-15T22:34:44.8688169Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-05-15T22:34:44.8689550Z libtype-tiny-perl libtype-tiny-xs-perl libtypes-serialiser-perl 2021-05-15T22:34:44.8691002Z libunicode-utf8-perl libvariable-magic-perl libwant-perl libxml-writer-perl 2021-05-15T22:34:44.8692341Z libyaml-libyaml-perl licensecheck lintian patchutils python3-gpg 2021-05-15T22:34:44.8693684Z python3-magic python3-unidiff python3-xdg t1utils wdiff 2021-05-15T22:34:44.8694349Z Suggested packages: 2021-05-15T22:34:44.8695266Z debtags adequate autopkgtest bls-standalone bsd-mailx | mailx 2021-05-15T22:34:44.8696449Z check-all-the-things cvs-buildpackage debhelper devscripts-el diffoscope 2021-05-15T22:34:44.8697691Z disorderfs dose-extra duck faketime gnuplot how-can-i-help libdbd-pg-perl 2021-05-15T22:34:44.8698984Z libnet-smtps-perl libterm-size-perl libyaml-syck-perl mozilla-devscripts 2021-05-15T22:34:44.8700247Z mutt piuparts quilt ratt reprotest svn-buildpackage w3m debian-keyring 2021-05-15T22:34:44.8701393Z equivs libsoap-lite-perl python3-paramiko mini-dinstall gettext-doc 2021-05-15T22:34:44.8702585Z autopoint libasprintf-dev libgettextpo-dev libossp-uuid-perl 2021-05-15T22:34:44.8703930Z libscalar-number-perl libbareword-filehandles-perl libindirect-perl 2021-05-15T22:34:44.8705518Z libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl 2021-05-15T22:34:44.8707075Z binutils-multiarch libtext-template-perl wdiff-doc 2021-05-15T22:34:45.3682524Z The following NEW packages will be installed: 2021-05-15T22:34:45.3684192Z dctrl-tools devscripts diffstat dput gdebi-core gettext intltool-debian 2021-05-15T22:34:45.3687796Z libapt-pkg-perl libarchive-zip-perl libarray-intspan-perl 2021-05-15T22:34:45.3700398Z libasync-mergepoint-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl 2021-05-15T22:34:45.3702498Z libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl 2021-05-15T22:34:45.3704255Z libclone-perl libcommon-sense-perl libconst-fast-perl 2021-05-15T22:34:45.3705807Z libcontextual-return-perl libcpanel-json-xs-perl libcroco3 2021-05-15T22:34:45.3709324Z libdata-optlist-perl libdevel-callchecker-perl libdevel-size-perl 2021-05-15T22:34:45.3713788Z libdigest-bubblebabble-perl libdigest-hmac-perl libdistro-info-perl 2021-05-15T22:34:45.3715496Z libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl 2021-05-15T22:34:45.3717074Z libfile-chdir-perl libfile-find-rule-perl libfile-homedir-perl 2021-05-15T22:34:45.3718399Z libfile-which-perl libfont-ttf-perl libfuture-perl 2021-05-15T22:34:45.3719898Z libgetopt-long-descriptive-perl libgit-wrapper-perl libgitlab-api-v4-perl 2021-05-15T22:34:45.3721690Z libhash-fieldhash-perl libhttp-tiny-multipart-perl libimport-into-perl 2021-05-15T22:34:45.3723102Z libio-async-loop-epoll-perl libio-async-perl libio-prompter-perl 2021-05-15T22:34:45.3724310Z libio-pty-perl libio-string-perl libipc-run-perl libjson-maybexs-perl 2021-05-15T22:34:45.3725478Z libjson-perl libjson-xs-perl liblinux-epoll-perl liblist-compare-perl 2021-05-15T22:34:45.3726766Z liblist-moreutils-perl liblist-someutils-perl liblist-someutils-xs-perl 2021-05-15T22:34:45.3728235Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-05-15T22:34:45.3729656Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-05-15T22:34:45.3730884Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-05-15T22:34:45.3731967Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-05-15T22:34:45.3733101Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-05-15T22:34:45.3734364Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-05-15T22:34:45.3735740Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-05-15T22:34:45.3737002Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-05-15T22:34:45.3738188Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-05-15T22:34:45.3739468Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-05-15T22:34:45.3740733Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-05-15T22:34:45.3742030Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-05-15T22:34:45.3743518Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-05-15T22:34:45.3744815Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-05-15T22:34:45.3746477Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-05-15T22:34:45.3747865Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-05-15T22:34:45.3749116Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-05-15T22:34:45.3750323Z libtype-tiny-perl libtype-tiny-xs-perl libtypes-serialiser-perl 2021-05-15T22:34:45.3751602Z libunicode-utf8-perl libvariable-magic-perl libwant-perl libxml-writer-perl 2021-05-15T22:34:45.3752757Z libyaml-libyaml-perl licensecheck lintian patchutils python3-gpg 2021-05-15T22:34:45.3753726Z python3-magic python3-unidiff python3-xdg qpdf t1utils wdiff 2021-05-15T22:34:45.3916446Z 0 upgraded, 130 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:34:45.3917337Z Need to get 8648 kB of archives. 2021-05-15T22:34:45.3918349Z After this operation, 32.3 MB of additional disk space will be used. 2021-05-15T22:34:45.3919985Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dctrl-tools amd64 2.24-3 [61.5 kB] 2021-05-15T22:34:45.3944877Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-which-perl all 1.23-1 [13.8 kB] 2021-05-15T22:34:45.3952505Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-homedir-perl all 1.004-1 [37.3 kB] 2021-05-15T22:34:45.3959215Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-pty-perl amd64 1:1.12-1 [32.4 kB] 2021-05-15T22:34:45.3966029Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libipc-run-perl all 20180523.0-2 [89.7 kB] 2021-05-15T22:34:45.3973080Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-method-modifiers-perl all 2.13-1 [16.2 kB] 2021-05-15T22:34:45.3979758Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-op-check-perl amd64 0.22-1build2 [10.2 kB] 2021-05-15T22:34:45.3987508Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdynaloader-functions-perl all 0.003-1 [11.9 kB] 2021-05-15T22:34:45.3994176Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-callchecker-perl amd64 0.008-1ubuntu1 [14.5 kB] 2021-05-15T22:34:45.4001388Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-classify-perl amd64 0.015-1build2 [21.1 kB] 2021-05-15T22:34:45.4003300Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-runtime-perl all 0.016-1 [16.2 kB] 2021-05-15T22:34:45.4005143Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimport-into-perl all 1.002005-1 [11.0 kB] 2021-05-15T22:34:45.4012624Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librole-tiny-perl all 2.001004-1 [16.5 kB] 2021-05-15T22:34:45.4018191Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstrictures-perl all 2.000006-1 [16.3 kB] 2021-05-15T22:34:45.4022927Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-quote-perl all 2.006006-1 [19.5 kB] 2021-05-15T22:34:45.4058794Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoo-perl all 2.003006-1 [46.3 kB] 2021-05-15T22:34:45.4064524Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 patchutils amd64 0.3.4-2 [71.1 kB] 2021-05-15T22:34:45.4078480Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 wdiff amd64 1.2.2-2build1 [29.8 kB] 2021-05-15T22:34:45.4088107Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 devscripts amd64 2.20.2ubuntu2 [940 kB] 2021-05-15T22:34:45.4179177Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 diffstat amd64 1.63-1 [27.2 kB] 2021-05-15T22:34:45.4188838Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-gpg amd64 1.13.1-7ubuntu2 [165 kB] 2021-05-15T22:34:45.4215773Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dput all 1.0.3ubuntu1 [42.3 kB] 2021-05-15T22:34:45.4225211Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdebi-core all 0.9.5.7+nmu3 [116 kB] 2021-05-15T22:34:45.4240316Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB] 2021-05-15T22:34:45.4295337Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gettext amd64 0.19.8.1-10build1 [895 kB] 2021-05-15T22:34:45.4369693Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] 2021-05-15T22:34:45.4376787Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libapt-pkg-perl amd64 0.1.36build3 [68.5 kB] 2021-05-15T22:34:45.4391004Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-zip-perl all 1.67-2 [90.5 kB] 2021-05-15T22:34:45.4397921Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarray-intspan-perl all 2.003-1 [23.3 kB] 2021-05-15T22:34:45.4404079Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasync-mergepoint-perl all 0.04-2 [10.2 kB] 2021-05-15T22:34:45.4416608Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-implementation-perl all 0.09-1 [12.2 kB] 2021-05-15T22:34:45.4425210Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [6784 B] 2021-05-15T22:34:45.4427715Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvariable-magic-perl amd64 0.62-1build2 [34.4 kB] 2021-05-15T22:34:45.4429625Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-endofscope-perl all 0.24-1 [16.8 kB] 2021-05-15T22:34:45.4454303Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcapture-tiny-perl all 0.48-1 [20.4 kB] 2021-05-15T22:34:45.4456962Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-xsaccessor-perl amd64 1.19-3build3 [33.6 kB] 2021-05-15T22:34:45.4458844Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclone-perl amd64 0.43-2 [11.0 kB] 2021-05-15T22:34:45.4461418Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcommon-sense-perl amd64 3.74-2build6 [20.1 kB] 2021-05-15T22:34:45.4463114Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-util-perl amd64 1.07-3build5 [19.7 kB] 2021-05-15T22:34:45.4470485Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-install-perl all 0.928-1 [10.5 kB] 2021-05-15T22:34:45.4477259Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdata-optlist-perl all 0.110-1 [9956 B] 2021-05-15T22:34:45.4487501Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-perl all 0.987-1 [44.9 kB] 2021-05-15T22:34:45.4496797Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libconst-fast-perl all 0.014-1 [7958 B] 2021-05-15T22:34:45.4502665Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwant-perl amd64 0.29-1build4 [24.2 kB] 2021-05-15T22:34:45.4509327Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcontextual-return-perl all 0.004014-2 [53.1 kB] 2021-05-15T22:34:45.4521313Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcpanel-json-xs-perl amd64 4.19-1build1 [109 kB] 2021-05-15T22:34:45.4532913Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-bubblebabble-perl all 0.02-2 [7908 B] 2021-05-15T22:34:45.4538930Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.3 kB] 2021-05-15T22:34:45.4544695Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdistro-info-perl all 0.23ubuntu1 [4668 B] 2021-05-15T22:34:45.4549772Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-ip-perl all 1.26-2 [27.4 kB] 2021-05-15T22:34:45.4554703Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-perl all 1.22-1 [336 kB] 2021-05-15T22:34:45.4584603Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-domain-tld-perl all 1.75-1 [29.1 kB] 2021-05-15T22:34:45.4596331Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libemail-valid-perl all 1.202-1 [16.3 kB] 2021-05-15T22:34:45.4601447Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libexporter-tiny-perl all 1.002001-1 [35.5 kB] 2021-05-15T22:34:45.4606645Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-chdir-perl all 0.1008-1 [11.7 kB] 2021-05-15T22:34:45.4611394Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-compare-perl all 0.03-1 [7318 B] 2021-05-15T22:34:45.4616102Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-glob-perl all 0.10-1 [7554 B] 2021-05-15T22:34:45.4620851Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-find-rule-perl all 0.34-1 [28.3 kB] 2021-05-15T22:34:45.4625826Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-string-perl all 1.08-3 [11.1 kB] 2021-05-15T22:34:45.4630860Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfont-ttf-perl all 1.06-1 [313 kB] 2021-05-15T22:34:45.4657635Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfuture-perl all 0.43-1 [77.8 kB] 2021-05-15T22:34:45.4669658Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-validate-perl amd64 1.29-3 [52.7 kB] 2021-05-15T22:34:45.4678713Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgetopt-long-descriptive-perl all 0.104-1 [24.6 kB] 2021-05-15T22:34:45.4683929Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-versions-perl all 1.62-1 [9294 B] 2021-05-15T22:34:45.4690260Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgit-wrapper-perl all 0.048-1 [29.9 kB] 2021-05-15T22:34:45.4699025Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhttp-tiny-multipart-perl all 0.08-1 [8488 B] 2021-05-15T22:34:45.4700932Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-prompter-perl all 0.004015-1 [58.1 kB] 2021-05-15T22:34:45.4707213Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-perl all 4.02000-2 [80.9 kB] 2021-05-15T22:34:45.4741340Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-perl all 1.708-1 [67.8 kB] 2021-05-15T22:34:45.4743257Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-adapter-screen-perl all 0.140-1 [12.1 kB] 2021-05-15T22:34:45.4745065Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-perl all 0.38-1 [19.1 kB] 2021-05-15T22:34:45.4746982Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-identify-perl amd64 0.14-1build2 [10.7 kB] 2021-05-15T22:34:45.4748613Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-name-perl amd64 0.26-1 [11.5 kB] 2021-05-15T22:34:45.4795832Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnamespace-clean-perl all 0.27-1 [13.6 kB] 2021-05-15T22:34:45.4797673Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-tiny-perl all 0.108-1 [42.6 kB] 2021-05-15T22:34:45.4799433Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-perl all 1.008001-2 [304 kB] 2021-05-15T22:34:45.4812769Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgitlab-api-v4-perl all 0.25-1 [83.8 kB] 2021-05-15T22:34:45.4828590Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhash-fieldhash-perl amd64 0.15-1build2 [16.9 kB] 2021-05-15T22:34:45.4839253Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstruct-dumb-perl all 0.09-1 [10.5 kB] 2021-05-15T22:34:45.4845281Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-perl all 0.75-1 [254 kB] 2021-05-15T22:34:45.4871554Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.0 kB] 2021-05-15T22:34:45.4878391Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-loop-epoll-perl all 0.20-1 [10.4 kB] 2021-05-15T22:34:45.4885240Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtypes-serialiser-perl all 1.0-1 [12.1 kB] 2021-05-15T22:34:45.4894541Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-xs-perl amd64 4.020-1build1 [83.7 kB] 2021-05-15T22:34:45.4905371Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-maybexs-perl all 1.004000-1 [11.0 kB] 2021-05-15T22:34:45.4911803Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-compare-perl all 0.53-1 [65.6 kB] 2021-05-15T22:34:45.4920886Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-moreutils-perl amd64 0.416-1build5 [55.5 kB] 2021-05-15T22:34:45.4929012Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-perl all 0.58-1 [29.7 kB] 2021-05-15T22:34:45.4936746Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-xs-perl amd64 0.58-2 [32.5 kB] 2021-05-15T22:34:45.4943662Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-aliases-perl all 0.001006-1 [7176 B] 2021-05-15T22:34:45.4949405Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libobject-id-perl all 0.1.2-2ubuntu1 [15.9 kB] 2021-05-15T22:34:45.4954848Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-struct-perl all 0.017-1 [23.4 kB] 2021-05-15T22:34:45.4961827Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-sec-perl amd64 1.15-1 [44.6 kB] 2021-05-15T22:34:45.4968331Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-libidn-perl amd64 0.12.ds-3build2 [17.3 kB] 2021-05-15T22:34:45.4974933Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-range-perl all 0.12-1 [8556 B] 2021-05-15T22:34:45.4980033Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-xs-perl amd64 0.29-1build1 [18.4 kB] 2021-05-15T22:34:45.4985821Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-iterator-rule-perl all 1.014-1 [49.5 kB] 2021-05-15T22:34:45.4996220Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperl4-corelibs-perl all 0.004-2 [37.4 kB] 2021-05-15T22:34:45.5004043Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperlio-gzip-perl amd64 0.19-1build5 [14.6 kB] 2021-05-15T22:34:45.5009535Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpod-constants-perl all 0.19-1 [16.0 kB] 2021-05-15T22:34:45.5015040Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqpdf26 amd64 9.1.1-1build1 [421 kB] 2021-05-15T22:34:45.5064029Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libre-engine-re2-perl amd64 0.13-5 [16.2 kB] 2021-05-15T22:34:45.5128182Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libreadonly-perl all 2.050-2 [19.9 kB] 2021-05-15T22:34:45.5133840Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-perl all 0.204-1 [15.0 kB] 2021-05-15T22:34:45.5140014Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-xs-perl amd64 0.117-1build2 [12.0 kB] 2021-05-15T22:34:45.5147651Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-license-perl all 3.2.0-1 [36.2 kB] 2021-05-15T22:34:45.5155632Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-perl all 0.2.12-1 [17.1 kB] 2021-05-15T22:34:45.5163627Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-decoder-perl amd64 4.011+ds-1build1 [102 kB] 2021-05-15T22:34:45.5176981Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-encoder-perl amd64 4.011+ds-1build1 [104 kB] 2021-05-15T22:34:45.5193062Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-perl all 4.011-1 [8604 B] 2021-05-15T22:34:45.5200717Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-key-perl amd64 1.33-2build2 [35.4 kB] 2021-05-15T22:34:45.5212825Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-copyright-perl all 0.003006-1 [9608 B] 2021-05-15T22:34:45.5214937Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-escape-perl all 2010.002-2 [17.6 kB] 2021-05-15T22:34:45.5234917Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-shellquote-perl all 1.04-1 [12.0 kB] 2021-05-15T22:34:45.5269138Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libterm-readkey-perl amd64 2.38-1build1 [24.6 kB] 2021-05-15T22:34:45.5270903Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-fatal-perl all 0.014-1 [11.1 kB] 2021-05-15T22:34:45.5272537Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-refcount-perl all 0.10-1 [11.4 kB] 2021-05-15T22:34:45.5274252Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-levenshtein-perl all 0.13-1 [9612 B] 2021-05-15T22:34:45.5327672Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-xs-perl amd64 0.016-1 [22.9 kB] 2021-05-15T22:34:45.5329245Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libunicode-utf8-perl amd64 0.62-1build1 [18.1 kB] 2021-05-15T22:34:45.5341327Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxml-writer-perl all 0.625-1 [24.9 kB] 2021-05-15T22:34:45.5362205Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [28.5 kB] 2021-05-15T22:34:45.5368696Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 licensecheck all 3.0.45-1 [23.9 kB] 2021-05-15T22:34:45.5370668Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-size-perl amd64 0.83-1build1 [20.0 kB] 2021-05-15T22:34:45.5373120Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 t1utils amd64 1.41-3 [56.1 kB] 2021-05-15T22:34:45.5377393Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 lintian all 2.62.0 [980 kB] 2021-05-15T22:34:45.5467456Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-unidiff all 0.5.5-2 [9180 B] 2021-05-15T22:34:45.5473125Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-xdg all 0.26-1ubuntu1 [36.1 kB] 2021-05-15T22:34:45.5475017Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qpdf amd64 9.1.1-1build1 [476 kB] 2021-05-15T22:34:45.5524518Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-magic all 2:0.4.15-3 [9376 B] 2021-05-15T22:34:46.2097439Z Fetched 8648 kB in 0s (48.8 MB/s) 2021-05-15T22:34:46.2487930Z Selecting previously unselected package dctrl-tools. 2021-05-15T22:34:46.2707653Z (Reading database ... 2021-05-15T22:34:46.2708455Z (Reading database ... 5% 2021-05-15T22:34:46.2709103Z (Reading database ... 10% 2021-05-15T22:34:46.2709727Z (Reading database ... 15% 2021-05-15T22:34:46.2710331Z (Reading database ... 20% 2021-05-15T22:34:46.2710946Z (Reading database ... 25% 2021-05-15T22:34:46.2711537Z (Reading database ... 30% 2021-05-15T22:34:46.2712143Z (Reading database ... 35% 2021-05-15T22:34:46.2712744Z (Reading database ... 40% 2021-05-15T22:34:46.2713382Z (Reading database ... 45% 2021-05-15T22:34:46.2713989Z (Reading database ... 50% 2021-05-15T22:34:46.3039599Z (Reading database ... 55% 2021-05-15T22:34:46.3651652Z (Reading database ... 60% 2021-05-15T22:34:46.4012871Z (Reading database ... 65% 2021-05-15T22:34:46.4333938Z (Reading database ... 70% 2021-05-15T22:34:46.5161928Z (Reading database ... 75% 2021-05-15T22:34:46.6671717Z (Reading database ... 80% 2021-05-15T22:34:46.7298458Z (Reading database ... 85% 2021-05-15T22:34:46.8065515Z (Reading database ... 90% 2021-05-15T22:34:46.8709742Z (Reading database ... 95% 2021-05-15T22:34:46.8710414Z (Reading database ... 100% 2021-05-15T22:34:46.8711252Z (Reading database ... 254809 files and directories currently installed.) 2021-05-15T22:34:46.8825554Z Preparing to unpack .../000-dctrl-tools_2.24-3_amd64.deb ... 2021-05-15T22:34:46.8933811Z Unpacking dctrl-tools (2.24-3) ... 2021-05-15T22:34:46.9349738Z Selecting previously unselected package libfile-which-perl. 2021-05-15T22:34:46.9506591Z Preparing to unpack .../001-libfile-which-perl_1.23-1_all.deb ... 2021-05-15T22:34:46.9520080Z Unpacking libfile-which-perl (1.23-1) ... 2021-05-15T22:34:46.9788488Z Selecting previously unselected package libfile-homedir-perl. 2021-05-15T22:34:47.0002292Z Preparing to unpack .../002-libfile-homedir-perl_1.004-1_all.deb 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Done 2021-05-15T22:35:18.4788061Z [command]/usr/bin/sudo ln -s /opt/R/devel/bin/R /usr/local/bin/R 2021-05-15T22:35:18.4889296Z [command]/usr/bin/sudo ln -s /opt/R/devel/bin/Rscript /usr/local/bin/Rscript 2021-05-15T22:35:18.5180441Z ##[group]Run r-lib/actions/setup-tinytex@master 2021-05-15T22:35:18.5180977Z env: 2021-05-15T22:35:18.5181425Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:35:18.5181916Z TIC_DEPLOY_KEY: 2021-05-15T22:35:18.5182758Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:35:18.5184587Z GITHUB_PAT: *** 2021-05-15T22:35:18.5184948Z COVERALLS_TOKEN: 2021-05-15T22:35:18.5185393Z continue-on-error: true 2021-05-15T22:35:18.5185828Z VDIFFR_RUN_TESTS: 2021-05-15T22:35:18.5186590Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:35:18.5187063Z TZ: UTC 2021-05-15T22:35:18.5187452Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:35:18.5187898Z NOT_CRAN: true 2021-05-15T22:35:18.5188280Z ##[endgroup] 2021-05-15T22:35:18.5686960Z [command]sudo apt-get install -y texinfo 2021-05-15T22:35:18.8618269Z Reading package lists... 2021-05-15T22:35:19.0093508Z Building dependency tree... 2021-05-15T22:35:19.0109452Z Reading state information... 2021-05-15T22:35:19.2169429Z texinfo is already the newest version (6.7.0.dfsg.2-5). 2021-05-15T22:35:19.2190351Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:35:19.4176759Z [command]sh /home/runner/work/_temp/install-unx.sh 2021-05-15T22:35:19.4388400Z --2021-05-15 22:35:19-- https://yihui.org/tinytex/TinyTeX-1.tar.gz 2021-05-15T22:35:19.5746622Z Resolving yihui.org (yihui.org)... 76.76.21.21 2021-05-15T22:35:19.5813569Z Connecting to yihui.org (yihui.org)|76.76.21.21|:443... connected. 2021-05-15T22:35:19.6121659Z HTTP request sent, awaiting response... 301 Moved Permanently 2021-05-15T22:35:19.6125677Z Location: https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu [following] 2021-05-15T22:35:19.6131250Z --2021-05-15 22:35:19-- https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu 2021-05-15T22:35:19.6561129Z Resolving ci.appveyor.com (ci.appveyor.com)... 138.91.141.243 2021-05-15T22:35:19.7154571Z Connecting to ci.appveyor.com (ci.appveyor.com)|138.91.141.243|:443... connected. 2021-05-15T22:35:19.9171371Z HTTP request sent, awaiting response... 302 Found 2021-05-15T22:35:19.9177844Z Location: https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1548/8i40h7amajmqecux/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=JAOSia78pzSKKJNKlyPyhR%2F18zzhqIDRppOQX7oXTh4%3D&st=2021-05-15T22%3A34%3A19Z&se=2021-05-15T22%3A40%3A19Z&sp=r [following] 2021-05-15T22:35:19.9186561Z --2021-05-15 22:35:19-- https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1548/8i40h7amajmqecux/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=JAOSia78pzSKKJNKlyPyhR%2F18zzhqIDRppOQX7oXTh4%3D&st=2021-05-15T22%3A34%3A19Z&se=2021-05-15T22%3A40%3A19Z&sp=r 2021-05-15T22:35:19.9415668Z Resolving appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)... 52.239.228.196 2021-05-15T22:35:20.0059342Z Connecting to appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)|52.239.228.196|:443... connected. 2021-05-15T22:35:20.2536626Z HTTP request sent, awaiting response... 200 OK 2021-05-15T22:35:20.2540137Z Length: 67312830 (64M) [application/octet-stream] 2021-05-15T22:35:20.2542494Z Saving to: ‘TinyTeX.tar.gz’ 2021-05-15T22:35:20.8935471Z 2021-05-15T22:35:22.5494237Z 0K ........ ........ ........ ........ 49% 14.4M 2s 2021-05-15T22:35:23.6832452Z 32768K ........ ........ ........ ........ 99% 27.9M 0s 2021-05-15T22:35:23.6834543Z 65536K 100% 2.97M=3.4s 2021-05-15T22:35:23.6835166Z 2021-05-15T22:35:23.6842295Z 2021-05-15 22:35:23 (18.7 MB/s) - ‘TinyTeX.tar.gz’ saved [67312830/67312830] 2021-05-15T22:35:23.6843799Z 2021-05-15T22:35:25.7976466Z tlmgr: setting option sys_bin to /home/runner/bin. 2021-05-15T22:35:25.7978020Z tlmgr: updating /home/runner/.TinyTeX/tlpkg/texlive.tlpdb 2021-05-15T22:35:26.0537631Z ##[group]Run tlmgr update --self 2021-05-15T22:35:26.0538095Z tlmgr update --self 2021-05-15T22:35:26.0538796Z tlmgr install filecontents upquote courier courier-scaled biber biblatex collection-luatex ae thumbpdf grfext 2021-05-15T22:35:26.0539480Z tlmgr update --all 2021-05-15T22:35:26.0581214Z shell: /usr/bin/bash -e {0} 2021-05-15T22:35:26.0581579Z env: 2021-05-15T22:35:26.0582000Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:35:26.0582422Z TIC_DEPLOY_KEY: 2021-05-15T22:35:26.0583181Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:35:26.0584786Z GITHUB_PAT: *** 2021-05-15T22:35:26.0585152Z COVERALLS_TOKEN: 2021-05-15T22:35:26.0585605Z continue-on-error: true 2021-05-15T22:35:26.0586243Z VDIFFR_RUN_TESTS: 2021-05-15T22:35:26.0586720Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:35:26.0587120Z TZ: UTC 2021-05-15T22:35:26.0587482Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:35:26.0587917Z NOT_CRAN: true 2021-05-15T22:35:26.0588267Z ##[endgroup] 2021-05-15T22:35:28.0175252Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-05-15T22:35:28.0177113Z tlmgr: no self-updates for tlmgr available 2021-05-15T22:35:29.2726566Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-05-15T22:35:29.2729331Z [1/89, ??:??/??:??] install: addliga [1k] 2021-05-15T22:35:29.3655691Z [2/89, 00:00/00:00] install: ae [57k] 2021-05-15T22:35:29.4171439Z [3/89, 00:00/00:00] install: auto-pst-pdf-lua [3k] 2021-05-15T22:35:29.4594324Z [4/89, 00:00/00:00] install: barracuda 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[71/89, 00:05/00:05] install: plantuml [3k] 2021-05-15T22:35:34.3878341Z [72/89, 00:05/00:05] install: rsfs [55k] 2021-05-15T22:35:34.4385929Z [73/89, 00:05/00:05] install: selnolig [53k] 2021-05-15T22:35:34.4883701Z [74/89, 00:05/00:05] install: spelling [14k] 2021-05-15T22:35:34.5344167Z [75/89, 00:05/00:05] install: stricttex [2k] 2021-05-15T22:35:34.5792472Z [76/89, 00:05/00:05] install: texlive-common [1k] 2021-05-15T22:35:34.6245725Z [77/89, 00:05/00:05] install: texlive-en [1k] 2021-05-15T22:35:34.6685806Z [78/89, 00:05/00:05] install: texlive-msg-translations [144k] 2021-05-15T22:35:34.7254500Z [79/89, 00:05/00:05] install: thumbpdf.x86_64-linux [1k] 2021-05-15T22:35:34.7688240Z [80/89, 00:05/00:05] install: thumbpdf [19k] 2021-05-15T22:35:34.8142040Z [81/89, 00:05/00:05] install: tlshell.x86_64-linux [1k] 2021-05-15T22:35:34.8594456Z [82/89, 00:05/00:05] install: tlshell [29k] 2021-05-15T22:35:34.9074619Z [83/89, 00:05/00:05] install: typewriter [25k] 2021-05-15T22:35:34.9545478Z [84/89, 00:05/00:05] install: uninormalize [6k] 2021-05-15T22:35:35.0010520Z [85/89, 00:05/00:05] install: upquote [2k] 2021-05-15T22:35:35.0541569Z [86/89, 00:06/00:06] install: xdvi.x86_64-linux [530k] 2021-05-15T22:35:35.1522168Z [87/89, 00:06/00:06] install: xdvi [7k] 2021-05-15T22:35:35.2007455Z [88/89, 00:06/00:06] install: collection-basic [1k] 2021-05-15T22:35:35.2443953Z [89/89, 00:06/00:06] install: collection-luatex [1k] 2021-05-15T22:35:35.2635105Z running mktexlsr ... 2021-05-15T22:35:35.3421491Z done running mktexlsr. 2021-05-15T22:35:35.3701337Z running updmap-sys ... 2021-05-15T22:35:35.6361337Z done running updmap-sys. 2021-05-15T22:35:35.6362775Z regenerating fmtutil.cnf in /home/runner/.TinyTeX/texmf-dist 2021-05-15T22:35:35.6365152Z running fmtutil-sys --byfmt optex --no-error-if-no-engine=luajithbtex,luajittex,mfluajit --status-file=/tmp/MlgDybDNs_/uogmknlGW4 ... 2021-05-15T22:35:35.9827613Z done running fmtutil-sys --byfmt optex --no-error-if-no-engine=luajithbtex,luajittex,mfluajit --status-file=/tmp/MlgDybDNs_/uogmknlGW4. 2021-05-15T22:35:35.9828884Z OK: optex.fmt/luatex 2021-05-15T22:35:35.9829862Z tlmgr: package log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr.log 2021-05-15T22:35:35.9831027Z tlmgr: command log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr-commands.log 2021-05-15T22:35:37.2537254Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-05-15T22:35:37.2540549Z tlmgr: no updates available 2021-05-15T22:35:37.3659541Z ##[group]Run r-lib/actions/setup-pandoc@master 2021-05-15T22:35:37.3660101Z with: 2021-05-15T22:35:37.3660554Z pandoc-version: 2.7.3 2021-05-15T22:35:37.3660992Z env: 2021-05-15T22:35:37.3661489Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:35:37.3661999Z TIC_DEPLOY_KEY: 2021-05-15T22:35:37.3662917Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:35:37.3664856Z GITHUB_PAT: *** 2021-05-15T22:35:37.3665303Z COVERALLS_TOKEN: 2021-05-15T22:35:37.3665962Z continue-on-error: true 2021-05-15T22:35:37.3666598Z VDIFFR_RUN_TESTS: 2021-05-15T22:35:37.3667108Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:35:37.3667561Z TZ: UTC 2021-05-15T22:35:37.3667973Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:35:37.3668395Z NOT_CRAN: true 2021-05-15T22:35:37.3668801Z ##[endgroup] 2021-05-15T22:35:37.6572989Z [command]sudo apt-get install -y gdebi-core 2021-05-15T22:35:37.7267930Z Reading package lists... 2021-05-15T22:35:37.8775350Z Building dependency tree... 2021-05-15T22:35:37.8795706Z Reading state information... 2021-05-15T22:35:38.1168751Z gdebi-core is already the newest version (0.9.5.7+nmu3). 2021-05-15T22:35:38.1170129Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:35:38.1200700Z [command]sudo gdebi --non-interactive /home/runner/work/_temp/pandoc-2.7.3-1-amd64.deb 2021-05-15T22:35:38.2337367Z 2021-05-15T22:35:38.2499973Z Reading package lists... 0% 2021-05-15T22:35:38.2500635Z 2021-05-15T22:35:38.2548140Z Reading package lists... 100% 2021-05-15T22:35:38.2548484Z 2021-05-15T22:35:38.2548699Z 2021-05-15T22:35:38.2549123Z Reading package lists... Done 2021-05-15T22:35:38.2549437Z 2021-05-15T22:35:38.2549876Z Building dependency tree... 0% 2021-05-15T22:35:38.2550174Z 2021-05-15T22:35:38.2805594Z Building dependency tree... 0% 2021-05-15T22:35:38.2806069Z 2021-05-15T22:35:38.2806441Z Building dependency tree... 50% 2021-05-15T22:35:38.2806712Z 2021-05-15T22:35:38.3891236Z Building dependency tree... 50% 2021-05-15T22:35:38.3891985Z 2021-05-15T22:35:38.3892917Z Building dependency tree 2021-05-15T22:35:38.3893585Z 2021-05-15T22:35:38.3894534Z Reading state information... 0% 2021-05-15T22:35:38.3895231Z 2021-05-15T22:35:38.5241730Z Reading state information... 0% 2021-05-15T22:35:38.5242499Z 2021-05-15T22:35:38.5242952Z 2021-05-15T22:35:38.5243945Z Reading state information... Done 2021-05-15T22:35:38.5244665Z 2021-05-15T22:35:38.5245607Z Reading state information... 0% 2021-05-15T22:35:38.5283384Z 2021-05-15T22:35:38.5283970Z Reading state information... 1% 2021-05-15T22:35:38.5321693Z 2021-05-15T22:35:38.5322275Z Reading state information... 3% 2021-05-15T22:35:38.5356787Z 2021-05-15T22:35:38.5357283Z Reading state information... 5% 2021-05-15T22:35:38.5392034Z 2021-05-15T22:35:38.5392608Z Reading state information... 7% 2021-05-15T22:35:38.5429580Z 2021-05-15T22:35:38.5430087Z Reading state information... 9% 2021-05-15T22:35:38.5464820Z 2021-05-15T22:35:38.5465317Z Reading state information... 11% 2021-05-15T22:35:38.5499551Z 2021-05-15T22:35:38.5500188Z Reading state information... 13% 2021-05-15T22:35:38.5539569Z 2021-05-15T22:35:38.5540121Z Reading state information... 15% 2021-05-15T22:35:38.5576314Z 2021-05-15T22:35:38.5576814Z Reading state information... 17% 2021-05-15T22:35:38.5613603Z 2021-05-15T22:35:38.5614206Z Reading state information... 19% 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2021-05-15T22:35:38.7031577Z 2021-05-15T22:35:38.7032104Z Reading state information... 87% 2021-05-15T22:35:38.7066351Z 2021-05-15T22:35:38.7066773Z Reading state information... 89% 2021-05-15T22:35:38.7096671Z 2021-05-15T22:35:38.7097091Z Reading state information... 91% 2021-05-15T22:35:38.7134539Z 2021-05-15T22:35:38.7135113Z Reading state information... 93% 2021-05-15T22:35:38.7181741Z 2021-05-15T22:35:38.7182172Z Reading state information... 95% 2021-05-15T22:35:38.7235081Z 2021-05-15T22:35:38.7235861Z Reading state information... 97% 2021-05-15T22:35:38.7271172Z 2021-05-15T22:35:38.7271817Z Reading state information... 99% 2021-05-15T22:35:38.9904339Z Selecting previously unselected package pandoc. 2021-05-15T22:35:39.1078009Z (Reading database ... 261973 files and directories currently installed.) 2021-05-15T22:35:39.1181123Z Preparing to unpack .../_temp/pandoc-2.7.3-1-amd64.deb ... 2021-05-15T22:35:39.1198205Z Unpacking pandoc (2.7.3-1) ... 2021-05-15T22:35:41.1180261Z Setting up pandoc (2.7.3-1) ... 2021-05-15T22:35:41.1223425Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:35:41.9467350Z 2021-05-15T22:35:41.9468191Z 2021-05-15T22:35:41.9468995Z Reading state information... Done 2021-05-15T22:35:41.9819643Z ##[group]Run git config user.name adigherman 2021-05-15T22:35:41.9820434Z git config user.name adigherman 2021-05-15T22:35:41.9821137Z git config user.email adig@jhu.edu 2021-05-15T22:35:41.9864676Z shell: /usr/bin/bash -e {0} 2021-05-15T22:35:41.9865212Z env: 2021-05-15T22:35:41.9865810Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:35:41.9867967Z TIC_DEPLOY_KEY: 2021-05-15T22:35:41.9868918Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:35:41.9871624Z GITHUB_PAT: *** 2021-05-15T22:35:41.9872156Z COVERALLS_TOKEN: 2021-05-15T22:35:41.9872856Z continue-on-error: true 2021-05-15T22:35:41.9873438Z VDIFFR_RUN_TESTS: 2021-05-15T22:35:41.9874099Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:35:41.9874648Z TZ: UTC 2021-05-15T22:35:41.9875180Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:35:41.9875685Z NOT_CRAN: true 2021-05-15T22:35:41.9876223Z ##[endgroup] 2021-05-15T22:35:42.0166379Z ##[group]Run adigherman/actions/install-sysdeps-linux@master 2021-05-15T22:35:42.0166964Z env: 2021-05-15T22:35:42.0167383Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:35:42.0167813Z TIC_DEPLOY_KEY: 2021-05-15T22:35:42.0168560Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:35:42.0170134Z GITHUB_PAT: *** 2021-05-15T22:35:42.0170513Z COVERALLS_TOKEN: 2021-05-15T22:35:42.0170947Z continue-on-error: true 2021-05-15T22:35:42.0171383Z VDIFFR_RUN_TESTS: 2021-05-15T22:35:42.0171821Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:35:42.0172238Z TZ: UTC 2021-05-15T22:35:42.0172588Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:35:42.0172977Z NOT_CRAN: true 2021-05-15T22:35:42.0173317Z ##[endgroup] 2021-05-15T22:35:42.3500819Z Reading package lists... 2021-05-15T22:35:42.5252906Z Building dependency tree... 2021-05-15T22:35:42.5269253Z Reading state information... 2021-05-15T22:35:42.6651729Z The following additional packages will be installed: 2021-05-15T22:35:42.6657976Z cmake-data libjsoncpp1 librhash0 2021-05-15T22:35:42.6665445Z Suggested packages: 2021-05-15T22:35:42.6666669Z cmake-doc ninja-build 2021-05-15T22:35:42.7067655Z The following NEW packages will be installed: 2021-05-15T22:35:42.7074551Z cmake cmake-data libjsoncpp1 librhash0 2021-05-15T22:35:42.8273582Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:35:42.8275422Z Need to get 5470 kB of archives. 2021-05-15T22:35:42.8276267Z After this operation, 28.3 MB of additional disk space will be used. 2021-05-15T22:35:42.8278228Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake-data all 3.16.3-1ubuntu1 [1612 kB] 2021-05-15T22:35:42.8852417Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjsoncpp1 amd64 1.7.4-3.1ubuntu2 [75.6 kB] 2021-05-15T22:35:42.9002512Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librhash0 amd64 1.3.9-1 [113 kB] 2021-05-15T22:35:42.9119958Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake amd64 3.16.3-1ubuntu1 [3669 kB] 2021-05-15T22:35:43.4497375Z Fetched 5470 kB in 0s (16.5 MB/s) 2021-05-15T22:35:43.4877684Z Selecting previously unselected package cmake-data. 2021-05-15T22:35:43.4946766Z (Reading database ... 2021-05-15T22:35:43.4947499Z (Reading database ... 5% 2021-05-15T22:35:43.4948376Z (Reading database ... 10% 2021-05-15T22:35:43.4949072Z (Reading database ... 15% 2021-05-15T22:35:43.4949596Z (Reading database ... 20% 2021-05-15T22:35:43.4950155Z (Reading database ... 25% 2021-05-15T22:35:43.4950671Z (Reading database ... 30% 2021-05-15T22:35:43.4951171Z (Reading database ... 35% 2021-05-15T22:35:43.4951684Z (Reading database ... 40% 2021-05-15T22:35:43.4952198Z (Reading database ... 45% 2021-05-15T22:35:43.4952699Z (Reading database ... 50% 2021-05-15T22:35:43.4990723Z (Reading database ... 55% 2021-05-15T22:35:43.5022653Z (Reading database ... 60% 2021-05-15T22:35:43.5064589Z (Reading database ... 65% 2021-05-15T22:35:43.5193011Z (Reading database ... 70% 2021-05-15T22:35:43.5302086Z (Reading database ... 75% 2021-05-15T22:35:43.5580879Z (Reading database ... 80% 2021-05-15T22:35:43.5857815Z (Reading database ... 85% 2021-05-15T22:35:43.5989054Z (Reading database ... 90% 2021-05-15T22:35:43.6060392Z (Reading database ... 95% 2021-05-15T22:35:43.6061903Z (Reading database ... 100% 2021-05-15T22:35:43.6063680Z (Reading database ... 261980 files and directories currently installed.) 2021-05-15T22:35:43.6162968Z Preparing to unpack .../cmake-data_3.16.3-1ubuntu1_all.deb ... 2021-05-15T22:35:43.6415236Z Unpacking cmake-data (3.16.3-1ubuntu1) ... 2021-05-15T22:35:44.1828272Z Selecting previously unselected package libjsoncpp1:amd64. 2021-05-15T22:35:44.2083305Z Preparing to unpack .../libjsoncpp1_1.7.4-3.1ubuntu2_amd64.deb ... 2021-05-15T22:35:44.2118374Z Unpacking libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-05-15T22:35:44.2448797Z Selecting previously unselected package librhash0:amd64. 2021-05-15T22:35:44.2727039Z Preparing to unpack .../librhash0_1.3.9-1_amd64.deb ... 2021-05-15T22:35:44.2741952Z Unpacking librhash0:amd64 (1.3.9-1) ... 2021-05-15T22:35:44.3107355Z Selecting previously unselected package cmake. 2021-05-15T22:35:44.3367386Z Preparing to unpack .../cmake_3.16.3-1ubuntu1_amd64.deb ... 2021-05-15T22:35:44.3378882Z Unpacking cmake (3.16.3-1ubuntu1) ... 2021-05-15T22:35:44.7796567Z Setting up librhash0:amd64 (1.3.9-1) ... 2021-05-15T22:35:44.7833183Z Setting up cmake-data (3.16.3-1ubuntu1) ... 2021-05-15T22:35:44.8242657Z Setting up libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-05-15T22:35:44.8275008Z Setting up cmake (3.16.3-1ubuntu1) ... 2021-05-15T22:35:44.8311912Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:35:45.9492448Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:35:47.9716050Z Reading package lists... 2021-05-15T22:35:48.1323021Z Building dependency tree... 2021-05-15T22:35:48.1340985Z Reading state information... 2021-05-15T22:35:48.2863766Z Suggested packages: 2021-05-15T22:35:48.2865356Z libssh-doc 2021-05-15T22:35:48.3305702Z The following NEW packages will be installed: 2021-05-15T22:35:48.3312595Z libssh-dev 2021-05-15T22:35:48.3631927Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:35:48.3633043Z Need to get 219 kB of archives. 2021-05-15T22:35:48.3634410Z After this operation, 1127 kB of additional disk space will be used. 2021-05-15T22:35:48.3636485Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-dev amd64 0.9.3-2ubuntu2.1 [219 kB] 2021-05-15T22:35:48.7656919Z Fetched 219 kB in 0s (7127 kB/s) 2021-05-15T22:35:48.7965812Z Selecting previously unselected package libssh-dev:amd64. 2021-05-15T22:35:48.8030222Z (Reading database ... 2021-05-15T22:35:48.8031251Z (Reading database ... 5% 2021-05-15T22:35:48.8031960Z (Reading database ... 10% 2021-05-15T22:35:48.8032874Z (Reading database ... 15% 2021-05-15T22:35:48.8033622Z (Reading database ... 20% 2021-05-15T22:35:48.8034354Z (Reading database ... 25% 2021-05-15T22:35:48.8035167Z (Reading database ... 30% 2021-05-15T22:35:48.8035912Z (Reading database ... 35% 2021-05-15T22:35:48.8036661Z (Reading database ... 40% 2021-05-15T22:35:48.8037415Z (Reading database ... 45% 2021-05-15T22:35:48.8038149Z (Reading database ... 50% 2021-05-15T22:35:48.8071092Z (Reading database ... 55% 2021-05-15T22:35:48.8111059Z (Reading database ... 60% 2021-05-15T22:35:48.8147316Z (Reading database ... 65% 2021-05-15T22:35:48.8266563Z (Reading database ... 70% 2021-05-15T22:35:48.8375630Z (Reading database ... 75% 2021-05-15T22:35:48.8642198Z (Reading database ... 80% 2021-05-15T22:35:48.8938540Z (Reading database ... 85% 2021-05-15T22:35:48.9075900Z (Reading database ... 90% 2021-05-15T22:35:48.9151179Z (Reading database ... 95% 2021-05-15T22:35:48.9152020Z (Reading database ... 100% 2021-05-15T22:35:48.9153201Z (Reading database ... 264764 files and directories currently installed.) 2021-05-15T22:35:48.9264127Z Preparing to unpack .../libssh-dev_0.9.3-2ubuntu2.1_amd64.deb ... 2021-05-15T22:35:48.9279423Z Unpacking libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-05-15T22:35:49.0068751Z Setting up libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-05-15T22:35:51.1096574Z Reading package lists... 2021-05-15T22:35:51.2825777Z Building dependency tree... 2021-05-15T22:35:51.2845176Z Reading state information... 2021-05-15T22:35:51.5080104Z The following NEW packages will be installed: 2021-05-15T22:35:51.5086925Z jags 2021-05-15T22:35:51.5328224Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:35:51.5329161Z Need to get 1562 kB of archives. 2021-05-15T22:35:51.5329982Z After this operation, 3615 kB of additional disk space will be used. 2021-05-15T22:35:51.5331994Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 jags amd64 4.3.0-3build1 [1562 kB] 2021-05-15T22:35:52.0334484Z Fetched 1562 kB in 0s (21.5 MB/s) 2021-05-15T22:35:52.0674857Z Selecting previously unselected package jags. 2021-05-15T22:35:52.0759354Z (Reading database ... 2021-05-15T22:35:52.0763888Z (Reading database ... 5% 2021-05-15T22:35:52.0764461Z (Reading database ... 10% 2021-05-15T22:35:52.0765022Z (Reading database ... 15% 2021-05-15T22:35:52.0765574Z (Reading database ... 20% 2021-05-15T22:35:52.0766112Z (Reading database ... 25% 2021-05-15T22:35:52.0766668Z (Reading database ... 30% 2021-05-15T22:35:52.0767196Z (Reading database ... 35% 2021-05-15T22:35:52.0767739Z (Reading database ... 40% 2021-05-15T22:35:52.0768270Z (Reading database ... 45% 2021-05-15T22:35:52.0768817Z (Reading database ... 50% 2021-05-15T22:35:52.0813498Z (Reading database ... 55% 2021-05-15T22:35:52.0854901Z (Reading database ... 60% 2021-05-15T22:35:52.0899521Z (Reading database ... 65% 2021-05-15T22:35:52.1039138Z (Reading database ... 70% 2021-05-15T22:35:52.1170920Z (Reading database ... 75% 2021-05-15T22:35:52.1487096Z (Reading database ... 80% 2021-05-15T22:35:52.1832767Z (Reading database ... 85% 2021-05-15T22:35:52.1983962Z (Reading database ... 90% 2021-05-15T22:35:52.2066837Z (Reading database ... 95% 2021-05-15T22:35:52.2067549Z (Reading database ... 100% 2021-05-15T22:35:52.2068561Z (Reading database ... 264783 files and directories currently installed.) 2021-05-15T22:35:52.2183530Z Preparing to unpack .../jags_4.3.0-3build1_amd64.deb ... 2021-05-15T22:35:52.2209866Z Unpacking jags (4.3.0-3build1) ... 2021-05-15T22:35:52.3980821Z Setting up jags (4.3.0-3build1) ... 2021-05-15T22:35:52.4094190Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:35:53.2086658Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:35:55.3743000Z Reading package lists... 2021-05-15T22:35:55.5382332Z Building dependency tree... 2021-05-15T22:35:55.5401210Z Reading state information... 2021-05-15T22:35:55.6936789Z The following additional packages will be installed: 2021-05-15T22:35:55.6938881Z libnode64 libuv1-dev 2021-05-15T22:35:55.7400848Z The following NEW packages will be installed: 2021-05-15T22:35:55.7408310Z libnode-dev libnode64 libuv1-dev 2021-05-15T22:35:55.7665091Z 0 upgraded, 3 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:35:55.7665879Z Need to get 6239 kB of archives. 2021-05-15T22:35:55.7667228Z After this operation, 24.9 MB of additional disk space will be used. 2021-05-15T22:35:55.7669305Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libuv1-dev amd64 1.34.2-1ubuntu1.1 [103 kB] 2021-05-15T22:35:55.7839218Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode64 amd64 10.19.0~dfsg-3ubuntu1 [5765 kB] 2021-05-15T22:35:56.0420874Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode-dev amd64 10.19.0~dfsg-3ubuntu1 [370 kB] 2021-05-15T22:35:56.4960187Z Fetched 6239 kB in 0s (20.3 MB/s) 2021-05-15T22:35:56.5288297Z Selecting previously unselected package libuv1-dev:amd64. 2021-05-15T22:35:56.5363201Z (Reading database ... 2021-05-15T22:35:56.5364152Z (Reading database ... 5% 2021-05-15T22:35:56.5364915Z (Reading database ... 10% 2021-05-15T22:35:56.5365684Z (Reading database ... 15% 2021-05-15T22:35:56.5366441Z (Reading database ... 20% 2021-05-15T22:35:56.5367239Z (Reading database ... 25% 2021-05-15T22:35:56.5367986Z (Reading database ... 30% 2021-05-15T22:35:56.5368713Z (Reading database ... 35% 2021-05-15T22:35:56.5369460Z (Reading database ... 40% 2021-05-15T22:35:56.5370207Z (Reading database ... 45% 2021-05-15T22:35:56.5370953Z (Reading database ... 50% 2021-05-15T22:35:56.5405026Z (Reading database ... 55% 2021-05-15T22:35:56.5444321Z (Reading database ... 60% 2021-05-15T22:35:56.5486913Z (Reading database ... 65% 2021-05-15T22:35:56.5626952Z (Reading database ... 70% 2021-05-15T22:35:56.5744969Z (Reading database ... 75% 2021-05-15T22:35:56.6036463Z (Reading database ... 80% 2021-05-15T22:35:56.6332124Z (Reading database ... 85% 2021-05-15T22:35:56.6479530Z (Reading database ... 90% 2021-05-15T22:35:56.6562043Z (Reading database ... 95% 2021-05-15T22:35:56.6562999Z (Reading database ... 100% 2021-05-15T22:35:56.6564311Z (Reading database ... 264923 files and directories currently installed.) 2021-05-15T22:35:56.6678390Z Preparing to unpack .../libuv1-dev_1.34.2-1ubuntu1.1_amd64.deb ... 2021-05-15T22:35:56.6694566Z Unpacking libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-05-15T22:35:56.7147367Z Selecting previously unselected package libnode64:amd64. 2021-05-15T22:35:56.7359585Z Preparing to unpack .../libnode64_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-05-15T22:35:56.7384888Z Unpacking libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-15T22:35:57.5544504Z Selecting previously unselected package libnode-dev:amd64. 2021-05-15T22:35:57.5839019Z Preparing to unpack .../libnode-dev_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-05-15T22:35:57.5883025Z Unpacking libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-15T22:35:58.1163302Z Setting up libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-05-15T22:35:58.1198723Z Setting up libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-15T22:35:58.1234675Z Setting up libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-15T22:35:58.1270802Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:36:00.2939904Z Reading package lists... 2021-05-15T22:36:00.4454716Z Building dependency tree... 2021-05-15T22:36:00.4471255Z Reading state information... 2021-05-15T22:36:00.6048604Z The following additional packages will be installed: 2021-05-15T22:36:00.6052855Z libfftw3-bin libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-05-15T22:36:00.6054979Z Suggested packages: 2021-05-15T22:36:00.6057732Z libfftw3-doc 2021-05-15T22:36:00.6563232Z The following NEW packages will be installed: 2021-05-15T22:36:00.6573404Z libfftw3-bin libfftw3-dev libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-05-15T22:36:00.6761560Z 0 upgraded, 5 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:36:00.6762317Z Need to get 3986 kB of archives. 2021-05-15T22:36:00.6763099Z After this operation, 22.4 MB of additional disk space will be used. 2021-05-15T22:36:00.6764828Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-long3 amd64 3.3.8-2ubuntu1 [313 kB] 2021-05-15T22:36:00.6828625Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-quad3 amd64 3.3.8-2ubuntu1 [673 kB] 2021-05-15T22:36:00.6970129Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-single3 amd64 3.3.8-2ubuntu1 [756 kB] 2021-05-15T22:36:00.7114948Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-bin amd64 3.3.8-2ubuntu1 [32.2 kB] 2021-05-15T22:36:00.7120411Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-dev amd64 3.3.8-2ubuntu1 [2211 kB] 2021-05-15T22:36:01.1708105Z Fetched 3986 kB in 0s (46.2 MB/s) 2021-05-15T22:36:01.2068536Z Selecting previously unselected package libfftw3-long3:amd64. 2021-05-15T22:36:01.2106888Z (Reading database ... 2021-05-15T22:36:01.2107457Z (Reading database ... 5% 2021-05-15T22:36:01.2108049Z (Reading database ... 10% 2021-05-15T22:36:01.2109244Z (Reading database ... 15% 2021-05-15T22:36:01.2110286Z (Reading database ... 20% 2021-05-15T22:36:01.2110858Z (Reading database ... 25% 2021-05-15T22:36:01.2111417Z (Reading database ... 30% 2021-05-15T22:36:01.2111966Z (Reading database ... 35% 2021-05-15T22:36:01.2112504Z (Reading database ... 40% 2021-05-15T22:36:01.2113519Z (Reading database ... 45% 2021-05-15T22:36:01.2114093Z (Reading database ... 50% 2021-05-15T22:36:01.2163818Z (Reading database ... 55% 2021-05-15T22:36:01.2204502Z (Reading database ... 60% 2021-05-15T22:36:01.2243968Z (Reading database ... 65% 2021-05-15T22:36:01.2372328Z (Reading database ... 70% 2021-05-15T22:36:01.2488087Z (Reading database ... 75% 2021-05-15T22:36:01.2787170Z (Reading database ... 80% 2021-05-15T22:36:01.3110375Z (Reading database ... 85% 2021-05-15T22:36:01.3257713Z (Reading database ... 90% 2021-05-15T22:36:01.3337460Z (Reading database ... 95% 2021-05-15T22:36:01.3338482Z (Reading database ... 100% 2021-05-15T22:36:01.3340000Z (Reading database ... 265059 files and directories currently installed.) 2021-05-15T22:36:01.3446546Z Preparing to unpack .../libfftw3-long3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-15T22:36:01.3487194Z Unpacking libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-05-15T22:36:01.4148320Z Selecting previously unselected package libfftw3-quad3:amd64. 2021-05-15T22:36:01.4332448Z Preparing to unpack .../libfftw3-quad3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-15T22:36:01.4343990Z Unpacking libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-05-15T22:36:01.5348778Z Selecting previously unselected package libfftw3-single3:amd64. 2021-05-15T22:36:01.5584838Z Preparing to unpack .../libfftw3-single3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-15T22:36:01.5600240Z Unpacking libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-05-15T22:36:01.6617606Z Selecting previously unselected package libfftw3-bin. 2021-05-15T22:36:01.6863523Z Preparing to unpack .../libfftw3-bin_3.3.8-2ubuntu1_amd64.deb ... 2021-05-15T22:36:01.6881053Z Unpacking libfftw3-bin (3.3.8-2ubuntu1) ... 2021-05-15T22:36:01.7228496Z Selecting previously unselected package libfftw3-dev:amd64. 2021-05-15T22:36:01.7456369Z Preparing to unpack .../libfftw3-dev_3.3.8-2ubuntu1_amd64.deb ... 2021-05-15T22:36:01.7471808Z Unpacking libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-05-15T22:36:02.0456200Z Setting up libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-05-15T22:36:02.0493973Z Setting up libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-05-15T22:36:02.0539677Z Setting up libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-05-15T22:36:02.0570735Z Setting up libfftw3-bin (3.3.8-2ubuntu1) ... 2021-05-15T22:36:02.0611146Z Setting up libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-05-15T22:36:02.0645880Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:36:02.8744104Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:36:04.9955428Z Reading package lists... 2021-05-15T22:36:05.1627328Z Building dependency tree... 2021-05-15T22:36:05.1643559Z Reading state information... 2021-05-15T22:36:05.3187770Z The following additional packages will be installed: 2021-05-15T22:36:05.3189128Z libdcmtk14 2021-05-15T22:36:05.3644900Z The following NEW packages will be installed: 2021-05-15T22:36:05.3649499Z dcmtk libdcmtk14 2021-05-15T22:36:05.4244806Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:36:05.4246307Z Need to get 5546 kB of archives. 2021-05-15T22:36:05.4247773Z After this operation, 26.5 MB of additional disk space will be used. 2021-05-15T22:36:05.4251201Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdcmtk14 amd64 3.6.4-2.1build2 [4682 kB] 2021-05-15T22:36:05.6393348Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 dcmtk amd64 3.6.4-2.1build2 [864 kB] 2021-05-15T22:36:06.1417851Z Fetched 5546 kB in 0s (17.1 MB/s) 2021-05-15T22:36:06.1784679Z Selecting previously unselected package libdcmtk14. 2021-05-15T22:36:06.1869366Z (Reading database ... 2021-05-15T22:36:06.1870035Z (Reading database ... 5% 2021-05-15T22:36:06.1870580Z (Reading database ... 10% 2021-05-15T22:36:06.1871141Z (Reading database ... 15% 2021-05-15T22:36:06.1871698Z (Reading database ... 20% 2021-05-15T22:36:06.1872261Z (Reading database ... 25% 2021-05-15T22:36:06.1872809Z (Reading database ... 30% 2021-05-15T22:36:06.1873340Z (Reading database ... 35% 2021-05-15T22:36:06.1873893Z (Reading database ... 40% 2021-05-15T22:36:06.1874427Z (Reading database ... 45% 2021-05-15T22:36:06.1874980Z (Reading database ... 50% 2021-05-15T22:36:06.1917669Z (Reading database ... 55% 2021-05-15T22:36:06.1958451Z (Reading database ... 60% 2021-05-15T22:36:06.2006105Z (Reading database ... 65% 2021-05-15T22:36:06.2157756Z (Reading database ... 70% 2021-05-15T22:36:06.2278247Z (Reading database ... 75% 2021-05-15T22:36:06.2565844Z (Reading database ... 80% 2021-05-15T22:36:06.2905306Z (Reading database ... 85% 2021-05-15T22:36:06.3055129Z (Reading database ... 90% 2021-05-15T22:36:06.3135832Z (Reading database ... 95% 2021-05-15T22:36:06.3136442Z (Reading database ... 100% 2021-05-15T22:36:06.3137291Z (Reading database ... 265150 files and directories currently installed.) 2021-05-15T22:36:06.3256713Z Preparing to unpack .../libdcmtk14_3.6.4-2.1build2_amd64.deb ... 2021-05-15T22:36:06.3295191Z Unpacking libdcmtk14 (3.6.4-2.1build2) ... 2021-05-15T22:36:06.8748873Z Selecting previously unselected package dcmtk. 2021-05-15T22:36:06.8995448Z Preparing to unpack .../dcmtk_3.6.4-2.1build2_amd64.deb ... 2021-05-15T22:36:06.9121602Z Unpacking dcmtk (3.6.4-2.1build2) ... 2021-05-15T22:36:07.0689865Z Setting up libdcmtk14 (3.6.4-2.1build2) ... 2021-05-15T22:36:07.0722333Z Setting up dcmtk (3.6.4-2.1build2) ... 2021-05-15T22:36:07.0857827Z Adding `dcmtk' group to system ... 2021-05-15T22:36:07.1420292Z Adding `dcmtk' user to system ... 2021-05-15T22:36:07.3761058Z adduser: Warning: The home directory `/var/lib/dcmtk/db' does not belong to the user you are currently creating. 2021-05-15T22:36:07.6360826Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:36:09.3754758Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:36:11.5877799Z Reading package lists... 2021-05-15T22:36:11.7519668Z Building dependency tree... 2021-05-15T22:36:11.7538249Z Reading state information... 2021-05-15T22:36:11.9868302Z libsecret-1-dev is already the newest version (0.20.3-0ubuntu1). 2021-05-15T22:36:11.9869307Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:36:12.0549807Z Reading package lists... 2021-05-15T22:36:12.2098516Z Building dependency tree... 2021-05-15T22:36:12.2118936Z Reading state information... 2021-05-15T22:36:12.4604117Z libpng-dev is already the newest version (1.6.37-2). 2021-05-15T22:36:12.4605347Z libpng-dev set to manually installed. 2021-05-15T22:36:12.4606360Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:36:12.5287014Z Reading package lists... 2021-05-15T22:36:12.7071656Z Building dependency tree... 2021-05-15T22:36:12.7090145Z Reading state information... 2021-05-15T22:36:12.8647944Z The following additional packages will be installed: 2021-05-15T22:36:12.8650333Z libopenjp2-7 libpoppler-cpp0v5 libpoppler-dev libpoppler97 poppler-data 2021-05-15T22:36:12.8656485Z Suggested packages: 2021-05-15T22:36:12.8658166Z poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho 2021-05-15T22:36:12.8659996Z fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai 2021-05-15T22:36:12.8661413Z fonts-arphic-uming fonts-nanum 2021-05-15T22:36:12.9125600Z The following NEW packages will be installed: 2021-05-15T22:36:12.9127717Z libopenjp2-7 libpoppler-cpp-dev libpoppler-cpp0v5 libpoppler-dev 2021-05-15T22:36:12.9129101Z libpoppler97 poppler-data 2021-05-15T22:36:12.9324013Z 0 upgraded, 6 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:36:12.9325169Z Need to get 2582 kB of archives. 2021-05-15T22:36:12.9326479Z After this operation, 16.7 MB of additional disk space will be used. 2021-05-15T22:36:12.9328419Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 poppler-data all 0.4.9-2 [1475 kB] 2021-05-15T22:36:12.9562439Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopenjp2-7 amd64 2.3.1-1ubuntu4.20.04.1 [141 kB] 2021-05-15T22:36:12.9582056Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler97 amd64 0.86.1-0ubuntu1 [915 kB] 2021-05-15T22:36:12.9696048Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp0v5 amd64 0.86.1-0ubuntu1 [35.6 kB] 2021-05-15T22:36:12.9702238Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-dev amd64 0.86.1-0ubuntu1 [5336 B] 2021-05-15T22:36:12.9706013Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp-dev amd64 0.86.1-0ubuntu1 [10.4 kB] 2021-05-15T22:36:13.3897342Z Fetched 2582 kB in 0s (48.7 MB/s) 2021-05-15T22:36:13.4218296Z Selecting previously unselected package poppler-data. 2021-05-15T22:36:13.4297548Z (Reading database ... 2021-05-15T22:36:13.4298169Z (Reading database ... 5% 2021-05-15T22:36:13.4298721Z (Reading database ... 10% 2021-05-15T22:36:13.4299263Z (Reading database ... 15% 2021-05-15T22:36:13.4299810Z (Reading database ... 20% 2021-05-15T22:36:13.4300548Z (Reading database ... 25% 2021-05-15T22:36:13.4301106Z (Reading database ... 30% 2021-05-15T22:36:13.4301654Z (Reading database ... 35% 2021-05-15T22:36:13.4302188Z (Reading database ... 40% 2021-05-15T22:36:13.4302765Z (Reading database ... 45% 2021-05-15T22:36:13.4303309Z (Reading database ... 50% 2021-05-15T22:36:13.4345672Z (Reading database ... 55% 2021-05-15T22:36:13.4382782Z (Reading database ... 60% 2021-05-15T22:36:13.4421576Z (Reading database ... 65% 2021-05-15T22:36:13.4549933Z (Reading database ... 70% 2021-05-15T22:36:13.4652100Z (Reading database ... 75% 2021-05-15T22:36:13.4902868Z (Reading database ... 80% 2021-05-15T22:36:13.5211556Z (Reading database ... 85% 2021-05-15T22:36:13.5361102Z (Reading database ... 90% 2021-05-15T22:36:13.5443184Z (Reading database ... 95% 2021-05-15T22:36:13.5444211Z (Reading database ... 100% 2021-05-15T22:36:13.5445741Z (Reading database ... 265385 files and directories currently installed.) 2021-05-15T22:36:13.5555951Z Preparing to unpack .../0-poppler-data_0.4.9-2_all.deb ... 2021-05-15T22:36:13.5571050Z Unpacking poppler-data (0.4.9-2) ... 2021-05-15T22:36:13.8230156Z Selecting previously unselected package libopenjp2-7:amd64. 2021-05-15T22:36:13.8456899Z Preparing to unpack .../1-libopenjp2-7_2.3.1-1ubuntu4.20.04.1_amd64.deb ... 2021-05-15T22:36:13.8485773Z Unpacking libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-05-15T22:36:13.8947338Z Selecting previously unselected package libpoppler97:amd64. 2021-05-15T22:36:13.9143213Z Preparing to unpack .../2-libpoppler97_0.86.1-0ubuntu1_amd64.deb ... 2021-05-15T22:36:13.9153696Z Unpacking libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-05-15T22:36:14.0346882Z Selecting previously unselected package libpoppler-cpp0v5:amd64. 2021-05-15T22:36:14.0631809Z Preparing to unpack .../3-libpoppler-cpp0v5_0.86.1-0ubuntu1_amd64.deb ... 2021-05-15T22:36:14.0648487Z Unpacking libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-05-15T22:36:14.0948554Z Selecting previously unselected package libpoppler-dev:amd64. 2021-05-15T22:36:14.1196992Z Preparing to unpack .../4-libpoppler-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-05-15T22:36:14.1208398Z Unpacking libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-15T22:36:14.1508015Z Selecting previously unselected package libpoppler-cpp-dev:amd64. 2021-05-15T22:36:14.1731656Z Preparing to unpack .../5-libpoppler-cpp-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-05-15T22:36:14.1746844Z Unpacking libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-15T22:36:14.2349232Z Setting up poppler-data (0.4.9-2) ... 2021-05-15T22:36:14.2471764Z Setting up libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-05-15T22:36:14.2505238Z Setting up libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-05-15T22:36:14.2539019Z Setting up libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-05-15T22:36:14.2576509Z Setting up libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-15T22:36:14.2616893Z Setting up libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-15T22:36:14.2664232Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-15T22:36:14.3043490Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:36:16.3386934Z Reading package lists... 2021-05-15T22:36:16.4949622Z Building dependency tree... 2021-05-15T22:36:16.4987318Z Reading state information... 2021-05-15T22:36:16.6702440Z The following additional packages will be installed: 2021-05-15T22:36:16.6707568Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libsz2 2021-05-15T22:36:16.6714630Z Suggested packages: 2021-05-15T22:36:16.6715345Z libhdf5-doc 2021-05-15T22:36:16.7209447Z The following NEW packages will be installed: 2021-05-15T22:36:16.7218454Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libhdf5-dev 2021-05-15T22:36:16.7220954Z libsz2 2021-05-15T22:36:16.8343041Z 0 upgraded, 7 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:36:16.8344075Z Need to get 4074 kB of archives. 2021-05-15T22:36:16.8345108Z After this operation, 17.6 MB of additional disk space will be used. 2021-05-15T22:36:16.8348402Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 hdf5-helpers amd64 1.10.4+repack-11ubuntu1 [13.6 kB] 2021-05-15T22:36:16.8407752Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec0 amd64 1.0.4-1 [19.1 kB] 2021-05-15T22:36:16.8470627Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsz2 amd64 1.0.4-1 [5188 B] 2021-05-15T22:36:16.8529345Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-103 amd64 1.10.4+repack-11ubuntu1 [1311 kB] 2021-05-15T22:36:16.8968584Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-cpp-103 amd64 1.10.4+repack-11ubuntu1 [120 kB] 2021-05-15T22:36:16.9129736Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec-dev amd64 1.0.4-1 [16.9 kB] 2021-05-15T22:36:16.9296808Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-dev amd64 1.10.4+repack-11ubuntu1 [2589 kB] 2021-05-15T22:36:17.4386833Z Fetched 4074 kB in 0s (14.9 MB/s) 2021-05-15T22:36:17.4708735Z Selecting previously unselected package hdf5-helpers. 2021-05-15T22:36:17.4729892Z (Reading database ... 2021-05-15T22:36:17.4730407Z (Reading database ... 5% 2021-05-15T22:36:17.4730851Z (Reading database ... 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2021-05-15T22:36:17.5910219Z (Reading database ... 265945 files and directories currently installed.) 2021-05-15T22:36:17.6035530Z Preparing to unpack .../0-hdf5-helpers_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-15T22:36:17.6056418Z Unpacking hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-05-15T22:36:17.6427267Z Selecting previously unselected package libaec0:amd64. 2021-05-15T22:36:17.6638176Z Preparing to unpack .../1-libaec0_1.0.4-1_amd64.deb ... 2021-05-15T22:36:17.6670924Z Unpacking libaec0:amd64 (1.0.4-1) ... 2021-05-15T22:36:17.6987655Z Selecting previously unselected package libsz2:amd64. 2021-05-15T22:36:17.7241608Z Preparing to unpack .../2-libsz2_1.0.4-1_amd64.deb ... 2021-05-15T22:36:17.7254123Z Unpacking libsz2:amd64 (1.0.4-1) ... 2021-05-15T22:36:17.7588807Z Selecting previously unselected package libhdf5-103:amd64. 2021-05-15T22:36:17.7830587Z Preparing to unpack .../3-libhdf5-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-15T22:36:17.7855273Z Unpacking libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-15T22:36:17.9338966Z Selecting previously unselected package libhdf5-cpp-103:amd64. 2021-05-15T22:36:17.9627348Z Preparing to unpack .../4-libhdf5-cpp-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-15T22:36:17.9641261Z Unpacking libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-15T22:36:18.0049765Z Selecting previously unselected package libaec-dev:amd64. 2021-05-15T22:36:18.0284471Z Preparing to unpack .../5-libaec-dev_1.0.4-1_amd64.deb ... 2021-05-15T22:36:18.0306930Z Unpacking libaec-dev:amd64 (1.0.4-1) ... 2021-05-15T22:36:18.0667869Z Selecting previously unselected package libhdf5-dev. 2021-05-15T22:36:18.0898291Z Preparing to unpack .../6-libhdf5-dev_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-15T22:36:18.0911370Z Unpacking libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-05-15T22:36:18.4316905Z Setting up hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-05-15T22:36:18.4354097Z Setting up libaec0:amd64 (1.0.4-1) ... 2021-05-15T22:36:18.4387090Z Setting up libsz2:amd64 (1.0.4-1) ... 2021-05-15T22:36:18.4421090Z Setting up libaec-dev:amd64 (1.0.4-1) ... 2021-05-15T22:36:18.4450500Z Setting up libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-15T22:36:18.4478495Z Setting up libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-15T22:36:18.4505649Z Setting up libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-05-15T22:36:18.4588338Z update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 2021-05-15T22:36:18.4628731Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:36:19.2058335Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:36:21.2252204Z Reading package lists... 2021-05-15T22:36:21.3720982Z Building dependency tree... 2021-05-15T22:36:21.3734745Z Reading state information... 2021-05-15T22:36:21.5133034Z The following additional packages will be installed: 2021-05-15T22:36:21.5136402Z libdrm-dev libgl-dev libglu1-mesa libglx-dev 2021-05-15T22:36:21.5623727Z The following NEW packages will be installed: 2021-05-15T22:36:21.5631638Z libdrm-dev libgl-dev libglu1-mesa libglu1-mesa-dev libglx-dev 2021-05-15T22:36:21.5632950Z mesa-common-dev 2021-05-15T22:36:21.5826427Z 0 upgraded, 6 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:36:21.5827245Z Need to get 1761 kB of archives. 2021-05-15T22:36:21.5828973Z After this operation, 5442 kB of additional disk space will be used. 2021-05-15T22:36:21.5831069Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libdrm-dev amd64 2.4.102-1ubuntu1~20.04.1 [126 kB] 2021-05-15T22:36:21.5872043Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libglx-dev amd64 1.3.2-1~ubuntu0.20.04.1 [14.0 kB] 2021-05-15T22:36:21.5877599Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [97.8 kB] 2021-05-15T22:36:21.5890290Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa amd64 9.0.1-1build1 [168 kB] 2021-05-15T22:36:21.5908407Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa-dev amd64 9.0.1-1build1 [207 kB] 2021-05-15T22:36:21.5931512Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-common-dev amd64 20.2.6-0ubuntu0.20.04.1 [1148 kB] 2021-05-15T22:36:22.0056628Z Fetched 1761 kB in 0s (43.8 MB/s) 2021-05-15T22:36:22.0366161Z Selecting previously unselected package libdrm-dev:amd64. 2021-05-15T22:36:22.0438487Z (Reading database ... 2021-05-15T22:36:22.0439863Z (Reading database ... 5% 2021-05-15T22:36:22.0441113Z (Reading database ... 10% 2021-05-15T22:36:22.0442297Z (Reading database ... 15% 2021-05-15T22:36:22.0443547Z (Reading database ... 20% 2021-05-15T22:36:22.0444183Z (Reading database ... 25% 2021-05-15T22:36:22.0444830Z (Reading database ... 30% 2021-05-15T22:36:22.0445429Z (Reading 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(2.4.102-1ubuntu1~20.04.1) ... 2021-05-15T22:36:22.2188820Z Selecting previously unselected package libglx-dev:amd64. 2021-05-15T22:36:22.2422617Z Preparing to unpack .../1-libglx-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-15T22:36:22.2438048Z Unpacking libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-15T22:36:22.2868729Z Selecting previously unselected package libgl-dev:amd64. 2021-05-15T22:36:22.3121458Z Preparing to unpack .../2-libgl-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-15T22:36:22.3131089Z Unpacking libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-15T22:36:22.3489182Z Selecting previously unselected package libglu1-mesa:amd64. 2021-05-15T22:36:22.3756848Z Preparing to unpack .../3-libglu1-mesa_9.0.1-1build1_amd64.deb ... 2021-05-15T22:36:22.3780818Z Unpacking libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-05-15T22:36:22.4191341Z Selecting previously unselected package libglu1-mesa-dev:amd64. 2021-05-15T22:36:22.4457453Z Preparing to unpack .../4-libglu1-mesa-dev_9.0.1-1build1_amd64.deb ... 2021-05-15T22:36:22.4471013Z Unpacking libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-05-15T22:36:22.4987847Z Selecting previously unselected package mesa-common-dev:amd64. 2021-05-15T22:36:22.5181970Z Preparing to unpack .../5-mesa-common-dev_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-15T22:36:22.5192967Z Unpacking mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-15T22:36:22.7048854Z Setting up libdrm-dev:amd64 (2.4.102-1ubuntu1~20.04.1) ... 2021-05-15T22:36:22.7082783Z Setting up libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-15T22:36:22.7113640Z Setting up libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-05-15T22:36:22.7149779Z Setting up libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-15T22:36:22.7182533Z Setting up libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-05-15T22:36:22.7210374Z Setting up mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-15T22:36:22.7267741Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:36:24.1277104Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:36:26.0423139Z Reading package lists... 2021-05-15T22:36:26.1886591Z Building dependency tree... 2021-05-15T22:36:26.1908631Z Reading state information... 2021-05-15T22:36:26.3270653Z The following additional packages will be installed: 2021-05-15T22:36:26.3273015Z libprotobuf-lite17 libprotoc17 2021-05-15T22:36:26.3670488Z The following NEW packages will be installed: 2021-05-15T22:36:26.3672437Z libprotobuf-dev libprotobuf-lite17 libprotoc-dev libprotoc17 2021-05-15T22:36:26.3673593Z protobuf-compiler 2021-05-15T22:36:26.4023636Z 0 upgraded, 5 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:36:26.4024718Z Need to get 2754 kB of archives. 2021-05-15T22:36:26.4025814Z After this operation, 19.9 MB of additional disk space will be used. 2021-05-15T22:36:26.4028697Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-lite17 amd64 3.6.1.3-2ubuntu5 [132 kB] 2021-05-15T22:36:26.4151365Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc17 amd64 3.6.1.3-2ubuntu5 [646 kB] 2021-05-15T22:36:26.4392471Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-dev amd64 3.6.1.3-2ubuntu5 [1155 kB] 2021-05-15T22:36:26.4799497Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc-dev amd64 3.6.1.3-2ubuntu5 [793 kB] 2021-05-15T22:36:26.5173476Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 protobuf-compiler amd64 3.6.1.3-2ubuntu5 [27.6 kB] 2021-05-15T22:36:26.9371937Z Fetched 2754 kB in 0s (18.6 MB/s) 2021-05-15T22:36:26.9717767Z Selecting previously unselected package libprotobuf-lite17:amd64. 2021-05-15T22:36:26.9794094Z (Reading database ... 2021-05-15T22:36:26.9794927Z (Reading database ... 5% 2021-05-15T22:36:26.9795674Z (Reading database ... 10% 2021-05-15T22:36:26.9796387Z (Reading database ... 15% 2021-05-15T22:36:26.9797070Z (Reading 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2021-05-15T22:36:27.1227919Z Preparing to unpack .../libprotobuf-lite17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-15T22:36:27.1260916Z Unpacking libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-15T22:36:27.1708238Z Selecting previously unselected package libprotoc17:amd64. 2021-05-15T22:36:27.1954787Z Preparing to unpack .../libprotoc17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-15T22:36:27.1970947Z Unpacking libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-15T22:36:27.2868559Z Selecting previously unselected package libprotobuf-dev:amd64. 2021-05-15T22:36:27.3117629Z Preparing to unpack .../libprotobuf-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-15T22:36:27.3136010Z Unpacking libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-15T22:36:27.4868658Z Selecting previously unselected package libprotoc-dev:amd64. 2021-05-15T22:36:27.5102121Z Preparing to unpack .../libprotoc-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-15T22:36:27.5113951Z Unpacking libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-15T22:36:27.6308818Z Selecting previously unselected package protobuf-compiler. 2021-05-15T22:36:27.6551825Z Preparing to unpack .../protobuf-compiler_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-15T22:36:27.6575265Z Unpacking protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-05-15T22:36:27.7170432Z Setting up libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-15T22:36:27.7227178Z Setting up protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-05-15T22:36:27.7263519Z Setting up libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-15T22:36:27.7309815Z Setting up libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-15T22:36:27.7358765Z Setting up libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-15T22:36:27.7409054Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:36:28.4351084Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:36:30.2935402Z Reading package lists... 2021-05-15T22:36:30.4291591Z Building dependency tree... 2021-05-15T22:36:30.4308553Z Reading state information... 2021-05-15T22:36:30.5650730Z The following additional packages will be installed: 2021-05-15T22:36:30.5655140Z i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 libasyncns0 2021-05-15T22:36:30.5658165Z libavc1394-0 libavcodec58 libavdevice58 libavfilter7 libavformat58 2021-05-15T22:36:30.5660670Z libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 libcaca0 2021-05-15T22:36:30.5664886Z libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 libcodec2-0.9 2021-05-15T22:36:30.5670038Z libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 libigdgmm11 2021-05-15T22:36:30.5672382Z libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-05-15T22:36:30.5674851Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-05-15T22:36:30.5677385Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-05-15T22:36:30.5679777Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-05-15T22:36:30.5682210Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-05-15T22:36:30.5685122Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-05-15T22:36:30.5687503Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-05-15T22:36:30.5689773Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-05-15T22:36:30.5691981Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-05-15T22:36:30.5693440Z Suggested packages: 2021-05-15T22:36:30.5695457Z ffmpeg-doc i965-va-driver-shaders libbluray-bdj jackd2 libportaudio2 2021-05-15T22:36:30.5697923Z opus-tools pulseaudio libraw1394-doc serdi sndiod sordi speex opencl-icd 2021-05-15T22:36:30.5700630Z libvdpau-va-gl1 nvidia-vdpau-driver nvidia-legacy-340xx-vdpau-driver 2021-05-15T22:36:30.5703102Z nvidia-legacy-304xx-vdpau-driver 2021-05-15T22:36:30.6367239Z The following NEW packages will be installed: 2021-05-15T22:36:30.6371332Z ffmpeg i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 2021-05-15T22:36:30.6372486Z libasyncns0 libavc1394-0 libavcodec58 libavdevice58 libavfilter7 2021-05-15T22:36:30.6374615Z libavformat58 libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 2021-05-15T22:36:30.6375674Z libcaca0 libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 2021-05-15T22:36:30.6378958Z libcodec2-0.9 libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 2021-05-15T22:36:30.6382179Z libigdgmm11 libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-05-15T22:36:30.6384627Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-05-15T22:36:30.6387884Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-05-15T22:36:30.6389016Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-05-15T22:36:30.6391662Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-05-15T22:36:30.6392684Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-05-15T22:36:30.6394736Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-05-15T22:36:30.6397355Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-05-15T22:36:30.6400968Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-05-15T22:36:30.6629490Z 0 upgraded, 76 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:36:30.6630321Z Need to get 47.1 MB of archives. 2021-05-15T22:36:30.6631156Z After this operation, 195 MB of additional disk space will be used. 2021-05-15T22:36:30.6633062Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaom0 amd64 1.0.0.errata1-3build1 [1160 kB] 2021-05-15T22:36:30.6837389Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva2 amd64 2.7.0-2 [53.5 kB] 2021-05-15T22:36:30.6855450Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-drm2 amd64 2.7.0-2 [7044 B] 2021-05-15T22:36:30.6861779Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-x11-2 amd64 2.7.0-2 [11.9 kB] 2021-05-15T22:36:30.6870040Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvdpau1 amd64 1.3-1ubuntu2 [25.6 kB] 2021-05-15T22:36:30.6877354Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1ubuntu1 [30.3 kB] 2021-05-15T22:36:30.6884596Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavutil56 amd64 7:4.2.4-1ubuntu0.1 [241 kB] 2021-05-15T22:36:30.6902086Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcodec2-0.9 amd64 0.9.2-2 [7886 kB] 2021-05-15T22:36:30.8284158Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgsm1 amd64 1.0.18-2 [24.4 kB] 2021-05-15T22:36:30.8307218Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmp3lame0 amd64 3.100-3 [133 kB] 2021-05-15T22:36:30.8317158Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libopus0 amd64 1.3.1-0ubuntu1 [191 kB] 2021-05-15T22:36:30.8333464Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libshine3 amd64 3.1.1-2 [23.2 kB] 2021-05-15T22:36:30.8340344Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsnappy1v5 amd64 1.1.8-1build1 [16.7 kB] 2021-05-15T22:36:30.8347570Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libspeex1 amd64 1.2~rc1.2-1.1ubuntu1 [53.2 kB] 2021-05-15T22:36:30.8349480Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsoxr0 amd64 0.1.3-2build1 [78.0 kB] 2021-05-15T22:36:30.8357398Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswresample3 amd64 7:4.2.4-1ubuntu0.1 [57.1 kB] 2021-05-15T22:36:30.8367864Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtheora0 amd64 1.1.1+dfsg.1-15ubuntu2 [162 kB] 2021-05-15T22:36:30.8386966Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtwolame0 amd64 0.4.0-2 [47.6 kB] 2021-05-15T22:36:30.8394615Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvorbisenc2 amd64 1.3.6-2ubuntu1 [70.7 kB] 2021-05-15T22:36:30.8404450Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwavpack1 amd64 5.2.0-1ubuntu0.1 [77.3 kB] 2021-05-15T22:36:30.8416992Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx264-155 amd64 2:0.155.2917+git0a84d98-2 [521 kB] 2021-05-15T22:36:30.8468945Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx265-179 amd64 3.2.1-1build1 [1060 kB] 2021-05-15T22:36:30.8563292Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxvidcore4 amd64 2:1.3.7-1 [201 kB] 2021-05-15T22:36:30.8585385Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi-common all 0.2.35-17 [32.5 kB] 2021-05-15T22:36:30.8592874Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi0 amd64 0.2.35-17 [237 kB] 2021-05-15T22:36:30.8619081Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavcodec58 amd64 7:4.2.4-1ubuntu0.1 [4876 kB] 2021-05-15T22:36:30.9449253Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libraw1394-11 amd64 2.1.2-1 [30.7 kB] 2021-05-15T22:36:30.9452625Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavc1394-0 amd64 0.5.4-5 [16.2 kB] 2021-05-15T22:36:30.9454702Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libass9 amd64 1:0.14.0-2 [88.0 kB] 2021-05-15T22:36:30.9459598Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbluray2 amd64 1:1.2.0-1 [138 kB] 2021-05-15T22:36:30.9492432Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libchromaprint1 amd64 1.4.3-3build1 [37.6 kB] 2021-05-15T22:36:30.9500000Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgme0 amd64 0.6.2-1build1 [123 kB] 2021-05-15T22:36:30.9524944Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmpg123-0 amd64 1.25.13-1 [124 kB] 2021-05-15T22:36:30.9546537Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenmpt0 amd64 0.4.11-1build1 [599 kB] 2021-05-15T22:36:30.9730301Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-gcrypt-4 amd64 0.9.3-2ubuntu2.1 [201 kB] 2021-05-15T22:36:30.9786234Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavformat58 amd64 7:4.2.4-1ubuntu0.1 [981 kB] 2021-05-15T22:36:31.0058141Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbs2b0 amd64 3.1.0+dfsg-2.2build1 [10.2 kB] 2021-05-15T22:36:31.0067171Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libflite1 amd64 2.1-release-3 [12.8 MB] 2021-05-15T22:36:31.2621042Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libserd-0-0 amd64 0.30.2-1 [46.6 kB] 2021-05-15T22:36:31.2628452Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsord-0-0 amd64 0.16.4-1 [19.5 kB] 2021-05-15T22:36:31.2633557Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsratom-0-0 amd64 0.6.4-1 [16.9 kB] 2021-05-15T22:36:31.2637420Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 liblilv-0-0 amd64 0.24.6-1ubuntu0.1 [40.6 kB] 2021-05-15T22:36:31.2644655Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmysofa1 amd64 1.0~dfsg0-1 [39.2 kB] 2021-05-15T22:36:31.2650267Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libpostproc55 amd64 7:4.2.4-1ubuntu0.1 [55.3 kB] 2021-05-15T22:36:31.2661330Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsamplerate0 amd64 0.1.9-2 [939 kB] 2021-05-15T22:36:31.2738695Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 librubberband2 amd64 1.8.2-1build1 [89.4 kB] 2021-05-15T22:36:31.2748633Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswscale5 amd64 7:4.2.4-1ubuntu0.1 [156 kB] 2021-05-15T22:36:31.2766304Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libvidstab1.1 amd64 1.1.0-2 [35.0 kB] 2021-05-15T22:36:31.2770494Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavfilter7 amd64 7:4.2.4-1ubuntu0.1 [1084 kB] 2021-05-15T22:36:31.2897305Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcaca0 amd64 0.99.beta19-2.1ubuntu1.20.04.1 [202 kB] 2021-05-15T22:36:31.2922367Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio18 amd64 2.0.0-2 [58.6 kB] 2021-05-15T22:36:31.2930373Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-cdda2 amd64 10.2+2.0.0-1 [17.6 kB] 2021-05-15T22:36:31.2935091Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-paranoia2 amd64 10.2+2.0.0-1 [16.2 kB] 2021-05-15T22:36:31.2939755Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdc1394-22 amd64 2.2.5-2.1 [79.6 kB] 2021-05-15T22:36:31.2948495Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libiec61883-0 amd64 1.2.0-3 [24.3 kB] 2021-05-15T22:36:31.2952809Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjack-jackd2-0 amd64 1.9.12~dfsg-2ubuntu2 [267 kB] 2021-05-15T22:36:31.2976993Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal-data all 1:1.19.1-1 [162 kB] 2021-05-15T22:36:31.2993256Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsndio7.0 amd64 1.5.0-3 [24.5 kB] 2021-05-15T22:36:31.2997422Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal1 amd64 1:1.19.1-1 [492 kB] 2021-05-15T22:36:31.3042770Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasyncns0 amd64 0.8-6 [12.1 kB] 2021-05-15T22:36:31.3045926Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libflac8 amd64 1.3.3-1build1 [103 kB] 2021-05-15T22:36:31.3056877Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsndfile1 amd64 1.0.28-7 [170 kB] 2021-05-15T22:36:31.3073308Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libpulse0 amd64 1:13.99.1-1ubuntu3.10 [262 kB] 2021-05-15T22:36:31.3104237Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsdl2-2.0-0 amd64 2.0.10+dfsg1-3 [407 kB] 2021-05-15T22:36:31.3142135Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavdevice58 amd64 7:4.2.4-1ubuntu0.1 [74.3 kB] 2021-05-15T22:36:31.3153693Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavresample4 amd64 7:4.2.4-1ubuntu0.1 [54.2 kB] 2021-05-15T22:36:31.3163640Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 ffmpeg amd64 7:4.2.4-1ubuntu0.1 [1453 kB] 2021-05-15T22:36:31.3314037Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libigdgmm11 amd64 20.1.1+ds1-1 [111 kB] 2021-05-15T22:36:31.3324288Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 intel-media-va-driver amd64 20.1.1+dfsg1-1 [1764 kB] 2021-05-15T22:36:31.3470288Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaacs0 amd64 0.9.0-2 [50.1 kB] 2021-05-15T22:36:31.3475212Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbdplus0 amd64 0.1.2-3 [47.3 kB] 2021-05-15T22:36:31.3482267Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 mesa-va-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2618 kB] 2021-05-15T22:36:31.3755990Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-vdpau-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2744 kB] 2021-05-15T22:36:31.4277829Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 i965-va-driver amd64 2.4.0-0ubuntu1 [924 kB] 2021-05-15T22:36:31.4437458Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 va-driver-all amd64 2.7.0-2 [4020 B] 2021-05-15T22:36:31.4439703Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 vdpau-driver-all amd64 1.3-1ubuntu2 [4596 B] 2021-05-15T22:36:32.0188064Z Fetched 47.1 MB in 1s (59.1 MB/s) 2021-05-15T22:36:32.0532636Z Selecting previously unselected package libaom0:amd64. 2021-05-15T22:36:32.0614209Z (Reading database ... 2021-05-15T22:36:32.0615184Z (Reading database ... 5% 2021-05-15T22:36:32.0616149Z (Reading database ... 10% 2021-05-15T22:36:32.0616744Z (Reading database ... 15% 2021-05-15T22:36:32.0617345Z (Reading database ... 20% 2021-05-15T22:36:32.0617949Z (Reading database ... 25% 2021-05-15T22:36:32.0618578Z (Reading database ... 30% 2021-05-15T22:36:32.0619088Z (Reading database ... 35% 2021-05-15T22:36:32.0619582Z (Reading database ... 40% 2021-05-15T22:36:32.0620293Z (Reading database ... 45% 2021-05-15T22:36:32.0620787Z (Reading database ... 50% 2021-05-15T22:36:32.0670454Z (Reading database ... 55% 2021-05-15T22:36:32.0701317Z (Reading database ... 60% 2021-05-15T22:36:32.0735786Z (Reading database ... 65% 2021-05-15T22:36:32.0849196Z (Reading database ... 70% 2021-05-15T22:36:32.0959509Z (Reading database ... 75% 2021-05-15T22:36:32.1216925Z (Reading database ... 80% 2021-05-15T22:36:32.1514972Z (Reading database ... 85% 2021-05-15T22:36:32.1651051Z (Reading database ... 90% 2021-05-15T22:36:32.1730810Z (Reading database ... 95% 2021-05-15T22:36:32.1732273Z (Reading database ... 100% 2021-05-15T22:36:32.1734080Z (Reading database ... 266807 files and directories currently installed.) 2021-05-15T22:36:32.1843990Z Preparing to unpack .../00-libaom0_1.0.0.errata1-3build1_amd64.deb ... 2021-05-15T22:36:32.1871766Z Unpacking libaom0:amd64 (1.0.0.errata1-3build1) ... 2021-05-15T22:36:32.3268501Z Selecting previously unselected package libva2:amd64. 2021-05-15T22:36:32.3538522Z Preparing to unpack .../01-libva2_2.7.0-2_amd64.deb ... 2021-05-15T22:36:32.3551200Z Unpacking libva2:amd64 (2.7.0-2) ... 2021-05-15T22:36:32.3831607Z Selecting previously unselected package libva-drm2:amd64. 2021-05-15T22:36:32.4097878Z Preparing to unpack .../02-libva-drm2_2.7.0-2_amd64.deb ... 2021-05-15T22:36:32.4111092Z Unpacking libva-drm2:amd64 (2.7.0-2) ... 2021-05-15T22:36:32.4429078Z Selecting previously unselected package libva-x11-2:amd64. 2021-05-15T22:36:32.4648721Z Preparing to unpack .../03-libva-x11-2_2.7.0-2_amd64.deb ... 2021-05-15T22:36:32.4662623Z Unpacking libva-x11-2:amd64 (2.7.0-2) ... 2021-05-15T22:36:32.4987472Z Selecting previously unselected package libvdpau1:amd64. 2021-05-15T22:36:32.5207084Z Preparing to unpack .../04-libvdpau1_1.3-1ubuntu2_amd64.deb ... 2021-05-15T22:36:32.5219759Z Unpacking libvdpau1:amd64 (1.3-1ubuntu2) ... 2021-05-15T22:36:32.5668640Z Selecting previously unselected package ocl-icd-libopencl1:amd64. 2021-05-15T22:36:32.5887256Z Preparing to unpack .../05-ocl-icd-libopencl1_2.2.11-1ubuntu1_amd64.deb ... 2021-05-15T22:36:32.5919161Z Unpacking ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... 2021-05-15T22:36:32.6268707Z Selecting previously unselected package libavutil56:amd64. 2021-05-15T22:36:32.6505936Z Preparing to unpack .../06-libavutil56_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-05-15T22:36:32.6526062Z Unpacking libavutil56:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T22:36:32.7029349Z Selecting previously unselected package libcodec2-0.9:amd64. 2021-05-15T22:36:32.7303710Z Preparing to unpack .../07-libcodec2-0.9_0.9.2-2_amd64.deb ... 2021-05-15T22:36:32.7326659Z Unpacking libcodec2-0.9:amd64 (0.9.2-2) ... 2021-05-15T22:36:33.4734407Z Selecting previously unselected package libgsm1:amd64. 2021-05-15T22:36:33.5004998Z Preparing to unpack .../08-libgsm1_1.0.18-2_amd64.deb ... 2021-05-15T22:36:33.5018469Z Unpacking libgsm1:amd64 (1.0.18-2) ... 2021-05-15T22:36:33.5347854Z Selecting previously unselected package libmp3lame0:amd64. 2021-05-15T22:36:33.5558933Z Preparing to unpack .../09-libmp3lame0_3.100-3_amd64.deb ... 2021-05-15T22:36:33.5569018Z Unpacking libmp3lame0:amd64 (3.100-3) ... 2021-05-15T22:36:33.5983833Z Selecting previously unselected package libopus0:amd64. 2021-05-15T22:36:33.6188905Z Preparing to unpack .../10-libopus0_1.3.1-0ubuntu1_amd64.deb ... 2021-05-15T22:36:33.6200902Z Unpacking libopus0:amd64 (1.3.1-0ubuntu1) ... 2021-05-15T22:36:33.6604965Z Selecting previously unselected package libshine3:amd64. 2021-05-15T22:36:33.6874728Z Preparing to unpack .../11-libshine3_3.1.1-2_amd64.deb ... 2021-05-15T22:36:33.6900492Z Unpacking libshine3:amd64 (3.1.1-2) ... 2021-05-15T22:36:33.7227243Z Selecting previously unselected package libsnappy1v5:amd64. 2021-05-15T22:36:33.7422241Z Preparing to unpack .../12-libsnappy1v5_1.1.8-1build1_amd64.deb ... 2021-05-15T22:36:33.7432714Z Unpacking libsnappy1v5:amd64 (1.1.8-1build1) ... 2021-05-15T22:36:33.7747040Z Selecting previously unselected package libspeex1:amd64. 2021-05-15T22:36:33.7957783Z Preparing to unpack .../13-libspeex1_1.2~rc1.2-1.1ubuntu1_amd64.deb ... 2021-05-15T22:36:33.7971084Z Unpacking libspeex1:amd64 (1.2~rc1.2-1.1ubuntu1) ... 2021-05-15T22:36:33.8347037Z Selecting previously unselected package libsoxr0:amd64. 2021-05-15T22:36:33.8528932Z Preparing to unpack .../14-libsoxr0_0.1.3-2build1_amd64.deb ... 2021-05-15T22:36:33.8539487Z Unpacking libsoxr0:amd64 (0.1.3-2build1) ... 2021-05-15T22:36:33.8907860Z Selecting previously unselected package libswresample3:amd64. 2021-05-15T22:36:33.9117336Z Preparing to unpack .../15-libswresample3_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-05-15T22:36:33.9128211Z Unpacking libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T22:36:33.9468094Z Selecting previously unselected package libtheora0:amd64. 2021-05-15T22:36:33.9678402Z Preparing to unpack .../16-libtheora0_1.1.1+dfsg.1-15ubuntu2_amd64.deb ... 2021-05-15T22:36:33.9689612Z Unpacking libtheora0:amd64 (1.1.1+dfsg.1-15ubuntu2) ... 2021-05-15T22:36:34.0107231Z Selecting previously unselected package libtwolame0:amd64. 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Setting up ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... 2021-05-15T22:36:41.2368128Z Setting up libasyncns0:amd64 (0.8-6) ... 2021-05-15T22:36:41.2400608Z Setting up libvdpau1:amd64 (1.3-1ubuntu2) ... 2021-05-15T22:36:41.2437782Z Setting up libwavpack1:amd64 (5.2.0-1ubuntu0.1) ... 2021-05-15T22:36:41.2468978Z Setting up libbs2b0:amd64 (3.1.0+dfsg-2.2build1) ... 2021-05-15T22:36:41.2502547Z Setting up libtheora0:amd64 (1.1.1+dfsg.1-15ubuntu2) ... 2021-05-15T22:36:41.2530304Z Setting up libopenal-data (1:1.19.1-1) ... 2021-05-15T22:36:41.2575993Z Setting up mesa-va-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-15T22:36:41.2621193Z Setting up libbluray2:amd64 (1:1.2.0-1) ... 2021-05-15T22:36:41.2656347Z Setting up libsamplerate0:amd64 (0.1.9-2) ... 2021-05-15T22:36:41.2695001Z Setting up libva-x11-2:amd64 (2.7.0-2) ... 2021-05-15T22:36:41.2731595Z Setting up libopenmpt0:amd64 (0.4.11-1build1) ... 2021-05-15T22:36:41.2764751Z Setting up libzvbi-common (0.2.35-17) ... 2021-05-15T22:36:41.2798171Z Setting up libmp3lame0:amd64 (3.100-3) ... 2021-05-15T22:36:41.2828171Z Setting up i965-va-driver:amd64 (2.4.0-0ubuntu1) ... 2021-05-15T22:36:41.2860203Z Setting up libvorbisenc2:amd64 (1.3.6-2ubuntu1) ... 2021-05-15T22:36:41.2897645Z Setting up libiec61883-0:amd64 (1.2.0-3) ... 2021-05-15T22:36:41.2989646Z Setting up libserd-0-0:amd64 (0.30.2-1) ... 2021-05-15T22:36:41.3043516Z Setting up libavc1394-0:amd64 (0.5.4-5) ... 2021-05-15T22:36:41.3087976Z Setting up mesa-vdpau-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-15T22:36:41.3125628Z Setting up libzvbi0:amd64 (0.2.35-17) ... 2021-05-15T22:36:41.3164656Z Setting up libcdio-cdda2:amd64 (10.2+2.0.0-1) ... 2021-05-15T22:36:41.3196941Z Setting up libcdio-paranoia2:amd64 (10.2+2.0.0-1) ... 2021-05-15T22:36:41.3234790Z Setting up libopenal1:amd64 (1:1.19.1-1) ... 2021-05-15T22:36:41.3266808Z Setting up libavutil56:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T22:36:41.3297268Z Setting up va-driver-all:amd64 (2.7.0-2) ... 2021-05-15T22:36:41.3325470Z Setting up libpostproc55:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T22:36:41.3365443Z Setting up librubberband2:amd64 (1.8.2-1build1) ... 2021-05-15T22:36:41.3397561Z Setting up libjack-jackd2-0:amd64 (1.9.12~dfsg-2ubuntu2) ... 2021-05-15T22:36:41.3435523Z Setting up vdpau-driver-all:amd64 (1.3-1ubuntu2) ... 2021-05-15T22:36:41.3466249Z Setting up libsord-0-0:amd64 (0.16.4-1) ... 2021-05-15T22:36:41.3501766Z Setting up libsratom-0-0:amd64 (0.6.4-1) ... 2021-05-15T22:36:41.3531938Z Setting up libswscale5:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T22:36:41.3563304Z Setting up libsndfile1:amd64 (1.0.28-7) ... 2021-05-15T22:36:41.3601632Z Setting up liblilv-0-0:amd64 (0.24.6-1ubuntu0.1) ... 2021-05-15T22:36:41.3631478Z Setting up libpulse0:amd64 (1:13.99.1-1ubuntu3.10) ... 2021-05-15T22:36:41.3743788Z Setting up libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T22:36:41.3774664Z Setting up libavresample4:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T22:36:41.3801364Z Setting up libavcodec58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T22:36:41.3836915Z Setting up libsdl2-2.0-0:amd64 (2.0.10+dfsg1-3) ... 2021-05-15T22:36:41.3866518Z Setting up libchromaprint1:amd64 (1.4.3-3build1) ... 2021-05-15T22:36:41.3893565Z Setting up libavformat58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T22:36:41.3928071Z Setting up libavfilter7:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T22:36:41.3961712Z Setting up libavdevice58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T22:36:41.3994739Z Setting up ffmpeg (7:4.2.4-1ubuntu0.1) ... 2021-05-15T22:36:41.4101145Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:36:42.5403922Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:36:44.6109559Z Reading package lists... 2021-05-15T22:36:44.7556063Z Building dependency tree... 2021-05-15T22:36:44.7575795Z Reading state information... 2021-05-15T22:36:44.9032003Z The following additional packages will be installed: 2021-05-15T22:36:44.9035884Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-05-15T22:36:44.9564355Z The following NEW packages will be installed: 2021-05-15T22:36:44.9566574Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-05-15T22:36:44.9568048Z libmagick++-dev 2021-05-15T22:36:44.9753468Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:36:44.9754808Z Need to get 309 kB of archives. 2021-05-15T22:36:44.9755758Z After this operation, 2202 kB of additional disk space will be used. 2021-05-15T22:36:44.9757873Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6-headers all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [47.5 kB] 2021-05-15T22:36:44.9783691Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-8 amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [133 kB] 2021-05-15T22:36:44.9814188Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-dev amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [127 kB] 2021-05-15T22:36:44.9847177Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-dev all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [1404 B] 2021-05-15T22:36:45.3690031Z Fetched 309 kB in 0s (13.0 MB/s) 2021-05-15T22:36:45.4044331Z Selecting previously unselected package libmagick++-6-headers. 2021-05-15T22:36:45.4117763Z (Reading database ... 2021-05-15T22:36:45.4118517Z (Reading database ... 5% 2021-05-15T22:36:45.4119160Z (Reading database ... 10% 2021-05-15T22:36:45.4119810Z (Reading database ... 15% 2021-05-15T22:36:45.4120620Z (Reading database ... 20% 2021-05-15T22:36:45.4121310Z (Reading database ... 25% 2021-05-15T22:36:45.4122007Z (Reading database ... 30% 2021-05-15T22:36:45.4122876Z (Reading database ... 35% 2021-05-15T22:36:45.4123573Z (Reading database ... 40% 2021-05-15T22:36:45.4124269Z (Reading database ... 45% 2021-05-15T22:36:45.4124946Z (Reading database ... 50% 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Preparing to unpack .../libmagick++-6.q16-8_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-05-15T22:36:45.6748761Z Unpacking libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-15T22:36:45.7188092Z Selecting previously unselected package libmagick++-6.q16-dev:amd64. 2021-05-15T22:36:45.7413707Z Preparing to unpack .../libmagick++-6.q16-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-05-15T22:36:45.7428203Z Unpacking libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-15T22:36:45.8028489Z Selecting previously unselected package libmagick++-dev. 2021-05-15T22:36:45.8266379Z Preparing to unpack .../libmagick++-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_all.deb ... 2021-05-15T22:36:45.8351796Z Unpacking libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-15T22:36:45.8890817Z Setting up libmagick++-6-headers (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-15T22:36:45.8995125Z Setting up libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-15T22:36:45.9029375Z Setting up libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-15T22:36:45.9069592Z Setting up libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-15T22:36:45.9168554Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:36:48.0574204Z Reading package lists... 2021-05-15T22:36:48.2195398Z Building dependency tree... 2021-05-15T22:36:48.2216468Z Reading state information... 2021-05-15T22:36:48.3826613Z imagemagick is already the newest version (8:6.9.10.23+dfsg-2.1ubuntu11.2). 2021-05-15T22:36:48.3829815Z The following additional packages will be installed: 2021-05-15T22:36:48.3833040Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 libgs9 libgs9-common 2021-05-15T22:36:48.3837634Z libijs-0.35 libjbig2dec0 2021-05-15T22:36:48.3841246Z Suggested packages: 2021-05-15T22:36:48.3845559Z fonts-noto fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre 2021-05-15T22:36:48.3849951Z ghostscript-x 2021-05-15T22:36:48.4322999Z The following NEW packages will be installed: 2021-05-15T22:36:48.4325371Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 ghostscript libgs9 2021-05-15T22:36:48.4328785Z libgs9-common libijs-0.35 libjbig2dec0 2021-05-15T22:36:48.4526732Z 0 upgraded, 8 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:36:48.4527913Z Need to get 11.2 MB of archives. 2021-05-15T22:36:48.4529802Z After this operation, 39.1 MB of additional disk space will be used. 2021-05-15T22:36:48.4532000Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-droid-fallback all 1:6.0.1r16-1.1 [1805 kB] 2021-05-15T22:36:48.4725753Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 fonts-noto-mono all 20200323-1build1~ubuntu20.04.1 [80.6 kB] 2021-05-15T22:36:48.4742349Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-urw-base35 all 20170801.1-3 [6333 kB] 2021-05-15T22:36:48.5330020Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9-common all 9.50~dfsg-5ubuntu4.2 [681 kB] 2021-05-15T22:36:48.5413327Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libijs-0.35 amd64 0.35-15 [15.7 kB] 2021-05-15T22:36:48.5420237Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjbig2dec0 amd64 0.18-1ubuntu1 [60.0 kB] 2021-05-15T22:36:48.5425870Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9 amd64 9.50~dfsg-5ubuntu4.2 [2172 kB] 2021-05-15T22:36:48.5663619Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 ghostscript amd64 9.50~dfsg-5ubuntu4.2 [51.6 kB] 2021-05-15T22:36:48.9732833Z Fetched 11.2 MB in 0s (86.6 MB/s) 2021-05-15T22:36:49.0067632Z Selecting previously unselected package fonts-droid-fallback. 2021-05-15T22:36:49.0129109Z (Reading database ... 2021-05-15T22:36:49.0129738Z (Reading database ... 5% 2021-05-15T22:36:49.0130298Z (Reading 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... 100% 2021-05-15T22:36:49.1228706Z (Reading database ... 267393 files and directories currently installed.) 2021-05-15T22:36:49.1327543Z Preparing to unpack .../0-fonts-droid-fallback_1%3a6.0.1r16-1.1_all.deb ... 2021-05-15T22:36:49.1574174Z Unpacking fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-05-15T22:36:49.3668166Z Selecting previously unselected package fonts-noto-mono. 2021-05-15T22:36:49.3926100Z Preparing to unpack .../1-fonts-noto-mono_20200323-1build1~ubuntu20.04.1_all.deb ... 2021-05-15T22:36:49.3938299Z Unpacking fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-05-15T22:36:49.4347370Z Selecting previously unselected package fonts-urw-base35. 2021-05-15T22:36:49.4535910Z Preparing to unpack .../2-fonts-urw-base35_20170801.1-3_all.deb ... 2021-05-15T22:36:49.5223172Z Unpacking fonts-urw-base35 (20170801.1-3) ... 2021-05-15T22:36:49.9547964Z Selecting previously unselected package libgs9-common. 2021-05-15T22:36:49.9766399Z Preparing to unpack .../3-libgs9-common_9.50~dfsg-5ubuntu4.2_all.deb ... 2021-05-15T22:36:49.9786502Z Unpacking libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-05-15T22:36:50.0947730Z Selecting previously unselected package libijs-0.35:amd64. 2021-05-15T22:36:50.1171940Z Preparing to unpack .../4-libijs-0.35_0.35-15_amd64.deb ... 2021-05-15T22:36:50.1196989Z Unpacking libijs-0.35:amd64 (0.35-15) ... 2021-05-15T22:36:50.1507883Z Selecting previously unselected package libjbig2dec0:amd64. 2021-05-15T22:36:50.1704144Z Preparing to unpack .../5-libjbig2dec0_0.18-1ubuntu1_amd64.deb ... 2021-05-15T22:36:50.1717712Z Unpacking libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-05-15T22:36:50.2147563Z Selecting previously unselected package libgs9:amd64. 2021-05-15T22:36:50.2362025Z Preparing to unpack .../6-libgs9_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-05-15T22:36:50.2374860Z Unpacking libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-05-15T22:36:50.5188676Z Selecting previously unselected package ghostscript. 2021-05-15T22:36:50.5430755Z Preparing to unpack .../7-ghostscript_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-05-15T22:36:50.5440910Z Unpacking ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-05-15T22:36:50.6101955Z Setting up fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-05-15T22:36:50.6163480Z Setting up libijs-0.35:amd64 (0.35-15) ... 2021-05-15T22:36:50.6209002Z Setting up fonts-urw-base35 (20170801.1-3) ... 2021-05-15T22:36:50.6810106Z Setting up libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-05-15T22:36:50.6862791Z Setting up fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-05-15T22:36:50.7113031Z Setting up libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-05-15T22:36:50.7160736Z Setting up libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-05-15T22:36:50.7195684Z Setting up ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-05-15T22:36:50.7314851Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-15T22:36:50.8429934Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:36:50.8659548Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:36:53.7781704Z Reading package lists... 2021-05-15T22:36:53.9171014Z Building dependency tree... 2021-05-15T22:36:53.9191431Z Reading state information... 2021-05-15T22:36:54.0584616Z The following additional packages will be installed: 2021-05-15T22:36:54.0588304Z libudunits2-0 libudunits2-data 2021-05-15T22:36:54.1069749Z The following NEW packages will be installed: 2021-05-15T22:36:54.1074077Z libudunits2-0 libudunits2-data libudunits2-dev 2021-05-15T22:36:54.1284099Z 0 upgraded, 3 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:36:54.1285447Z Need to get 429 kB of archives. 2021-05-15T22:36:54.1286460Z After this operation, 1026 kB of additional disk space will be used. 2021-05-15T22:36:54.1293732Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-data all 2.2.26-5 [18.8 kB] 2021-05-15T22:36:54.1313520Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-0 amd64 2.2.26-5 [48.9 kB] 2021-05-15T22:36:54.1323427Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-dev amd64 2.2.26-5 [362 kB] 2021-05-15T22:36:54.5147899Z Fetched 429 kB in 0s (16.8 MB/s) 2021-05-15T22:36:54.5410661Z Selecting previously unselected package libudunits2-data. 2021-05-15T22:36:54.5484660Z (Reading database ... 2021-05-15T22:36:54.5485437Z (Reading database ... 5% 2021-05-15T22:36:54.5486081Z (Reading database ... 10% 2021-05-15T22:36:54.5486848Z (Reading database ... 15% 2021-05-15T22:36:54.5487543Z (Reading database ... 20% 2021-05-15T22:36:54.5488220Z (Reading database ... 25% 2021-05-15T22:36:54.5488909Z (Reading database ... 30% 2021-05-15T22:36:54.5489602Z (Reading database ... 35% 2021-05-15T22:36:54.5490280Z (Reading database ... 40% 2021-05-15T22:36:54.5491136Z (Reading database ... 45% 2021-05-15T22:36:54.5491844Z (Reading database ... 50% 2021-05-15T22:36:54.5516528Z (Reading database ... 55% 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(2.2.26-5) ... 2021-05-15T22:36:54.7467684Z Selecting previously unselected package libudunits2-dev:amd64. 2021-05-15T22:36:54.7664634Z Preparing to unpack .../libudunits2-dev_2.2.26-5_amd64.deb ... 2021-05-15T22:36:54.7677056Z Unpacking libudunits2-dev:amd64 (2.2.26-5) ... 2021-05-15T22:36:54.8424336Z Setting up libudunits2-data (2.2.26-5) ... 2021-05-15T22:36:54.8466273Z Setting up libudunits2-0:amd64 (2.2.26-5) ... 2021-05-15T22:36:54.8502337Z Setting up libudunits2-dev:amd64 (2.2.26-5) ... 2021-05-15T22:36:54.8552431Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-15T22:36:54.9591492Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:36:56.8702894Z Reading package lists... 2021-05-15T22:36:57.0059585Z Building dependency tree... 2021-05-15T22:36:57.0075867Z Reading state information... 2021-05-15T22:36:57.1949314Z The following NEW packages will be installed: 2021-05-15T22:36:57.1953164Z libjq-dev 2021-05-15T22:36:57.2360758Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:36:57.2362744Z Need to get 11.2 kB of archives. 2021-05-15T22:36:57.2364565Z After this operation, 47.1 kB of additional disk space will be used. 2021-05-15T22:36:57.2368981Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libjq-dev amd64 1.6-1ubuntu0.20.04.1 [11.2 kB] 2021-05-15T22:36:57.6231417Z Fetched 11.2 kB in 0s (300 kB/s) 2021-05-15T22:36:57.6535745Z Selecting previously unselected package libjq-dev:amd64. 2021-05-15T22:36:57.6613040Z (Reading database ... 2021-05-15T22:36:57.6614007Z (Reading database ... 5% 2021-05-15T22:36:57.6615010Z (Reading database ... 10% 2021-05-15T22:36:57.6615565Z (Reading database ... 15% 2021-05-15T22:36:57.6616083Z (Reading database ... 20% 2021-05-15T22:36:57.6616646Z (Reading database ... 25% 2021-05-15T22:36:57.6617158Z (Reading database ... 30% 2021-05-15T22:36:57.6617655Z (Reading database ... 35% 2021-05-15T22:36:57.6618197Z (Reading database ... 40% 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(1.6-1ubuntu0.20.04.1) ... 2021-05-15T22:36:59.7369117Z Reading package lists... 2021-05-15T22:36:59.8769830Z Building dependency tree... 2021-05-15T22:36:59.8783219Z Reading state information... 2021-05-15T22:37:00.0626924Z The following NEW packages will be installed: 2021-05-15T22:37:00.0629360Z libmng2 2021-05-15T22:37:00.1037603Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:37:00.1038531Z Need to get 168 kB of archives. 2021-05-15T22:37:00.1039424Z After this operation, 571 kB of additional disk space will be used. 2021-05-15T22:37:00.1041643Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmng2 amd64 2.0.3+dfsg-3 [168 kB] 2021-05-15T22:37:00.4954583Z Fetched 168 kB in 0s (3667 kB/s) 2021-05-15T22:37:00.5248060Z Selecting previously unselected package libmng2:amd64. 2021-05-15T22:37:00.5316028Z (Reading database ... 2021-05-15T22:37:00.5316905Z (Reading database ... 5% 2021-05-15T22:37:00.5317676Z (Reading database ... 10% 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2021-05-15T22:37:00.6362059Z (Reading database ... 267992 files and directories currently installed.) 2021-05-15T22:37:00.6460401Z Preparing to unpack .../libmng2_2.0.3+dfsg-3_amd64.deb ... 2021-05-15T22:37:00.6507843Z Unpacking libmng2:amd64 (2.0.3+dfsg-3) ... 2021-05-15T22:37:00.7235406Z Setting up libmng2:amd64 (2.0.3+dfsg-3) ... 2021-05-15T22:37:00.7272609Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:37:02.6262449Z Reading package lists... 2021-05-15T22:37:02.7715047Z Building dependency tree... 2021-05-15T22:37:02.7735258Z Reading state information... 2021-05-15T22:37:02.8947230Z E: Unable to locate package libmng1 2021-05-15T22:37:02.9686435Z Reading package lists... 2021-05-15T22:37:03.1557082Z Building dependency tree... 2021-05-15T22:37:03.1576964Z Reading state information... 2021-05-15T22:37:03.2880258Z E: Unable to locate package libapparmor-devel 2021-05-15T22:37:03.3528953Z Reading package lists... 2021-05-15T22:37:03.5161103Z Building dependency tree... 2021-05-15T22:37:03.5181574Z Reading state information... 2021-05-15T22:37:03.6895557Z The following additional packages will be installed: 2021-05-15T22:37:03.6899360Z libij-java 2021-05-15T22:37:03.7419917Z The following NEW packages will be installed: 2021-05-15T22:37:03.7429263Z imagej libij-java 2021-05-15T22:37:03.8208705Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:37:03.8209620Z Need to get 2328 kB of archives. 2021-05-15T22:37:03.8210459Z After this operation, 2498 kB of additional disk space will be used. 2021-05-15T22:37:03.8212594Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libij-java all 1.52r-1 [2284 kB] 2021-05-15T22:37:03.9396583Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 imagej all 1.52r-1 [43.7 kB] 2021-05-15T22:37:04.3740138Z Fetched 2328 kB in 0s (11.9 MB/s) 2021-05-15T22:37:04.4035835Z Selecting previously unselected package libij-java. 2021-05-15T22:37:04.4105351Z (Reading database ... 2021-05-15T22:37:04.4106731Z (Reading database ... 5% 2021-05-15T22:37:04.4107723Z (Reading database ... 10% 2021-05-15T22:37:04.4108536Z (Reading database ... 15% 2021-05-15T22:37:04.4109290Z (Reading database ... 20% 2021-05-15T22:37:04.4110029Z (Reading database ... 25% 2021-05-15T22:37:04.4110824Z (Reading database ... 30% 2021-05-15T22:37:04.4111585Z (Reading database ... 35% 2021-05-15T22:37:04.4112317Z (Reading database ... 40% 2021-05-15T22:37:04.4113066Z (Reading database ... 45% 2021-05-15T22:37:04.4113915Z (Reading database ... 50% 2021-05-15T22:37:04.4147116Z (Reading database ... 55% 2021-05-15T22:37:04.4185760Z (Reading database ... 60% 2021-05-15T22:37:04.4213234Z (Reading database ... 65% 2021-05-15T22:37:04.4340622Z (Reading database ... 70% 2021-05-15T22:37:04.4458595Z (Reading database ... 75% 2021-05-15T22:37:04.4480890Z (Reading database ... 80% 2021-05-15T22:37:04.4972864Z (Reading database ... 85% 2021-05-15T22:37:04.5116914Z (Reading database ... 90% 2021-05-15T22:37:04.5180413Z (Reading database ... 95% 2021-05-15T22:37:04.5181396Z (Reading database ... 100% 2021-05-15T22:37:04.5182812Z (Reading database ... 267998 files and directories currently installed.) 2021-05-15T22:37:04.5275211Z Preparing to unpack .../libij-java_1.52r-1_all.deb ... 2021-05-15T22:37:04.5291959Z Unpacking libij-java (1.52r-1) ... 2021-05-15T22:37:04.6148326Z Selecting previously unselected package imagej. 2021-05-15T22:37:04.6360854Z Preparing to unpack .../imagej_1.52r-1_all.deb ... 2021-05-15T22:37:04.6370861Z Unpacking imagej (1.52r-1) ... 2021-05-15T22:37:04.7157046Z Setting up libij-java (1.52r-1) ... 2021-05-15T22:37:04.7188459Z Setting up imagej (1.52r-1) ... 2021-05-15T22:37:04.7237386Z Processing triggers for hicolor-icon-theme (0.17-2) ... 2021-05-15T22:37:05.5945304Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:37:06.2813954Z Processing triggers for mime-support (3.64ubuntu1) ... 2021-05-15T22:37:08.5136082Z Reading package lists... 2021-05-15T22:37:08.6675198Z Building dependency tree... 2021-05-15T22:37:08.6694118Z Reading state information... 2021-05-15T22:37:08.8155562Z Suggested packages: 2021-05-15T22:37:08.8158356Z bowtie2-examples 2021-05-15T22:37:08.8600245Z The following NEW packages will be installed: 2021-05-15T22:37:08.8606145Z bowtie2 2021-05-15T22:37:08.8819685Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:37:08.8820952Z Need to get 1324 kB of archives. 2021-05-15T22:37:08.8821947Z After this operation, 5630 kB of additional disk space will be used. 2021-05-15T22:37:08.8823960Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 bowtie2 amd64 2.3.5.1-6build1 [1324 kB] 2021-05-15T22:37:09.3151806Z Fetched 1324 kB in 0s (37.6 MB/s) 2021-05-15T22:37:09.3470661Z Selecting previously unselected package bowtie2. 2021-05-15T22:37:09.3550970Z (Reading database ... 2021-05-15T22:37:09.3551725Z (Reading database ... 5% 2021-05-15T22:37:09.3552261Z (Reading database ... 10% 2021-05-15T22:37:09.3552780Z (Reading database ... 15% 2021-05-15T22:37:09.3553277Z (Reading database ... 20% 2021-05-15T22:37:09.3553811Z (Reading database ... 25% 2021-05-15T22:37:09.3554305Z (Reading database ... 30% 2021-05-15T22:37:09.3554811Z (Reading database ... 35% 2021-05-15T22:37:09.3555305Z (Reading database ... 40% 2021-05-15T22:37:09.3555811Z (Reading database ... 45% 2021-05-15T22:37:09.3556331Z (Reading database ... 50% 2021-05-15T22:37:09.3596343Z (Reading database ... 55% 2021-05-15T22:37:09.3650804Z (Reading database ... 60% 2021-05-15T22:37:09.3682223Z (Reading database ... 65% 2021-05-15T22:37:09.3810169Z (Reading database ... 70% 2021-05-15T22:37:09.3938918Z (Reading database ... 75% 2021-05-15T22:37:09.3961991Z (Reading database ... 80% 2021-05-15T22:37:09.4487441Z (Reading database ... 85% 2021-05-15T22:37:09.4650727Z (Reading database ... 90% 2021-05-15T22:37:09.4728256Z (Reading database ... 95% 2021-05-15T22:37:09.4729010Z (Reading database ... 100% 2021-05-15T22:37:09.4730034Z (Reading database ... 268021 files and directories currently installed.) 2021-05-15T22:37:09.4840387Z Preparing to unpack .../bowtie2_2.3.5.1-6build1_amd64.deb ... 2021-05-15T22:37:09.4856403Z Unpacking bowtie2 (2.3.5.1-6build1) ... 2021-05-15T22:37:09.6795014Z Setting up bowtie2 (2.3.5.1-6build1) ... 2021-05-15T22:37:09.6833815Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:37:12.4795233Z Reading package lists... 2021-05-15T22:37:12.6108530Z Building dependency tree... 2021-05-15T22:37:12.6126351Z Reading state information... 2021-05-15T22:37:12.7252287Z E: Unable to locate package install 2021-05-15T22:37:12.7255076Z E: Unable to locate package gdal 2021-05-15T22:37:12.7815444Z Reading package lists... 2021-05-15T22:37:12.9157693Z Building dependency tree... 2021-05-15T22:37:12.9176437Z Reading state information... 2021-05-15T22:37:12.9386497Z Package insighttoolkit4-python is not available, but is referred to by another package. 2021-05-15T22:37:12.9387988Z This may mean that the package is missing, has been obsoleted, or 2021-05-15T22:37:12.9388991Z is only available from another source 2021-05-15T22:37:12.9389482Z 2021-05-15T22:37:13.0338860Z E: Package 'insighttoolkit4-python' has no installation candidate 2021-05-15T22:37:13.0952849Z Reading package lists... 2021-05-15T22:37:13.2285310Z Building dependency tree... 2021-05-15T22:37:13.2305100Z Reading state information... 2021-05-15T22:37:13.2504789Z Package libav-tools is not available, but is referred to by another package. 2021-05-15T22:37:13.2507566Z This may mean that the package is missing, has been obsoleted, or 2021-05-15T22:37:13.2509369Z is only available from another source 2021-05-15T22:37:13.2510998Z However the following packages replace it: 2021-05-15T22:37:13.2512331Z ffmpeg 2021-05-15T22:37:13.2513136Z 2021-05-15T22:37:13.3470794Z E: Package 'libav-tools' has no installation candidate 2021-05-15T22:37:13.4073954Z Reading package lists... 2021-05-15T22:37:13.5410226Z Building dependency tree... 2021-05-15T22:37:13.5428805Z Reading state information... 2021-05-15T22:37:13.6837659Z The following additional packages will be installed: 2021-05-15T22:37:13.6839758Z libgcrypt20-dev libgit2-28 libgpg-error-dev libhttp-parser-dev 2021-05-15T22:37:13.6841617Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-05-15T22:37:13.6844456Z libssh2-1-dev 2021-05-15T22:37:13.6845124Z Suggested packages: 2021-05-15T22:37:13.6846134Z libgcrypt20-doc libmbedtls-doc 2021-05-15T22:37:13.7310381Z The following NEW packages will be installed: 2021-05-15T22:37:13.7313164Z libgcrypt20-dev libgit2-28 libgit2-dev libgpg-error-dev libhttp-parser-dev 2021-05-15T22:37:13.7316848Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-05-15T22:37:13.7320933Z libssh2-1-dev 2021-05-15T22:37:13.7503127Z 0 upgraded, 11 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:37:13.7504014Z Need to get 2667 kB of archives. 2021-05-15T22:37:13.7504813Z After this operation, 11.2 MB of additional disk space will be used. 2021-05-15T22:37:13.7507262Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgpg-error-dev amd64 1.37-1 [109 kB] 2021-05-15T22:37:13.7543273Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcrypt20-dev amd64 1.8.5-5ubuntu1 [470 kB] 2021-05-15T22:37:13.7617716Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser2.9 amd64 2.9.2-2 [21.8 kB] 2021-05-15T22:37:13.7623666Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedcrypto3 amd64 2.16.4-1ubuntu2 [150 kB] 2021-05-15T22:37:13.7650040Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedx509-0 amd64 2.16.4-1ubuntu2 [42.3 kB] 2021-05-15T22:37:13.7659423Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls12 amd64 2.16.4-1ubuntu2 [71.8 kB] 2021-05-15T22:37:13.7673202Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-28 amd64 0.28.4+dfsg.1-2 [403 kB] 2021-05-15T22:37:13.7776561Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls-dev amd64 2.16.4-1ubuntu2 [444 kB] 2021-05-15T22:37:13.7854552Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libssh2-1-dev amd64 1.8.0-2.1build1 [244 kB] 2021-05-15T22:37:13.7905227Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser-dev amd64 2.9.2-2 [20.2 kB] 2021-05-15T22:37:13.7913629Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-dev amd64 0.28.4+dfsg.1-2 [691 kB] 2021-05-15T22:37:14.1952058Z Fetched 2667 kB in 0s (36.9 MB/s) 2021-05-15T22:37:14.2245828Z Selecting previously unselected package libgpg-error-dev. 2021-05-15T22:37:14.2311492Z (Reading database ... 2021-05-15T22:37:14.2312131Z (Reading database ... 5% 2021-05-15T22:37:14.2312682Z (Reading database 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2021-05-15T22:37:14.3378827Z (Reading database ... 268047 files and directories currently installed.) 2021-05-15T22:37:14.3486468Z Preparing to unpack .../00-libgpg-error-dev_1.37-1_amd64.deb ... 2021-05-15T22:37:14.3504067Z Unpacking libgpg-error-dev (1.37-1) ... 2021-05-15T22:37:14.3908417Z Selecting previously unselected package libgcrypt20-dev. 2021-05-15T22:37:14.4140969Z Preparing to unpack .../01-libgcrypt20-dev_1.8.5-5ubuntu1_amd64.deb ... 2021-05-15T22:37:14.4157631Z Unpacking libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-05-15T22:37:14.4924209Z Selecting previously unselected package libhttp-parser2.9:amd64. 2021-05-15T22:37:14.5211073Z Preparing to unpack .../02-libhttp-parser2.9_2.9.2-2_amd64.deb ... 2021-05-15T22:37:14.5237735Z Unpacking libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-05-15T22:37:14.5550084Z Selecting previously unselected package libmbedcrypto3:amd64. 2021-05-15T22:37:14.5824815Z Preparing to unpack .../03-libmbedcrypto3_2.16.4-1ubuntu2_amd64.deb ... 2021-05-15T22:37:14.5840266Z Unpacking libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-05-15T22:37:14.6307818Z Selecting previously unselected package libmbedx509-0:amd64. 2021-05-15T22:37:14.6521613Z Preparing to unpack .../04-libmbedx509-0_2.16.4-1ubuntu2_amd64.deb ... 2021-05-15T22:37:14.6533596Z Unpacking libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-05-15T22:37:14.6837835Z Selecting previously unselected package libmbedtls12:amd64. 2021-05-15T22:37:14.7096849Z Preparing to unpack .../05-libmbedtls12_2.16.4-1ubuntu2_amd64.deb ... 2021-05-15T22:37:14.7107297Z Unpacking libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-05-15T22:37:14.7400531Z Selecting previously unselected package libgit2-28:amd64. 2021-05-15T22:37:14.7721720Z Preparing to unpack .../06-libgit2-28_0.28.4+dfsg.1-2_amd64.deb ... 2021-05-15T22:37:14.7730918Z Unpacking libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-05-15T22:37:14.8427268Z Selecting previously unselected package libmbedtls-dev:amd64. 2021-05-15T22:37:14.8620165Z Preparing to unpack .../07-libmbedtls-dev_2.16.4-1ubuntu2_amd64.deb ... 2021-05-15T22:37:14.8631069Z Unpacking libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-05-15T22:37:14.9347598Z Selecting previously unselected package libssh2-1-dev:amd64. 2021-05-15T22:37:14.9576572Z Preparing to unpack .../08-libssh2-1-dev_1.8.0-2.1build1_amd64.deb ... 2021-05-15T22:37:14.9589878Z Unpacking libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-05-15T22:37:15.0136320Z Selecting previously unselected package libhttp-parser-dev. 2021-05-15T22:37:15.0389232Z Preparing to unpack .../09-libhttp-parser-dev_2.9.2-2_amd64.deb ... 2021-05-15T22:37:15.0402555Z Unpacking libhttp-parser-dev (2.9.2-2) ... 2021-05-15T22:37:15.0667349Z Selecting previously unselected package libgit2-dev:amd64. 2021-05-15T22:37:15.0907081Z Preparing to unpack .../10-libgit2-dev_0.28.4+dfsg.1-2_amd64.deb ... 2021-05-15T22:37:15.0918463Z Unpacking libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-05-15T22:37:15.2146368Z Setting up libgpg-error-dev (1.37-1) ... 2021-05-15T22:37:15.2194194Z Setting up libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-05-15T22:37:15.2239008Z Setting up libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-05-15T22:37:15.2292948Z Setting up libhttp-parser-dev (2.9.2-2) ... 2021-05-15T22:37:15.2331318Z Setting up libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-05-15T22:37:15.2363529Z Setting up libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-05-15T22:37:15.2410017Z Setting up libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-05-15T22:37:15.2451028Z Setting up libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-05-15T22:37:15.2504107Z Setting up libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-05-15T22:37:15.2554746Z Setting up libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-05-15T22:37:15.2600965Z Setting up libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-05-15T22:37:15.2639270Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:37:20.1347486Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-15T22:37:20.2401190Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:37:22.0923006Z Reading package lists... 2021-05-15T22:37:22.2295916Z Building dependency tree... 2021-05-15T22:37:22.2313610Z Reading state information... 2021-05-15T22:37:22.4548468Z libtiff-dev is already the newest version (4.1.0+git191117-2ubuntu0.20.04.1). 2021-05-15T22:37:22.4549878Z libtiff-dev set to manually installed. 2021-05-15T22:37:22.4555310Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:37:22.5148119Z Reading package lists... 2021-05-15T22:37:22.6580910Z Building dependency tree... 2021-05-15T22:37:22.6604274Z Reading state information... 2021-05-15T22:37:22.8677361Z unixodbc-dev is already the newest version (2.3.7). 2021-05-15T22:37:22.8678490Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:37:22.9312751Z Reading package lists... 2021-05-15T22:37:23.1025713Z Building dependency tree... 2021-05-15T22:37:23.1046005Z Reading state information... 2021-05-15T22:37:23.2868181Z The following NEW packages will be installed: 2021-05-15T22:37:23.2870931Z libsodium-dev 2021-05-15T22:37:23.3161874Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:37:23.3164349Z Need to get 169 kB of archives. 2021-05-15T22:37:23.3166518Z After this operation, 826 kB of additional disk space will be used. 2021-05-15T22:37:23.3169856Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsodium-dev amd64 1.0.18-1 [169 kB] 2021-05-15T22:37:23.7111065Z Fetched 169 kB in 0s (4191 kB/s) 2021-05-15T22:37:23.7425885Z Selecting previously unselected package libsodium-dev:amd64. 2021-05-15T22:37:23.7508253Z (Reading database ... 2021-05-15T22:37:23.7509138Z (Reading database ... 5% 2021-05-15T22:37:23.7510236Z (Reading database ... 10% 2021-05-15T22:37:23.7510833Z (Reading database ... 15% 2021-05-15T22:37:23.7511397Z (Reading database ... 20% 2021-05-15T22:37:23.7512001Z (Reading database ... 25% 2021-05-15T22:37:23.7512540Z (Reading database ... 30% 2021-05-15T22:37:23.7513089Z (Reading database ... 35% 2021-05-15T22:37:23.7513621Z (Reading database ... 40% 2021-05-15T22:37:23.7514170Z (Reading database ... 45% 2021-05-15T22:37:23.7514706Z (Reading database ... 50% 2021-05-15T22:37:23.7566508Z (Reading database ... 55% 2021-05-15T22:37:23.7619396Z (Reading database ... 60% 2021-05-15T22:37:23.7649372Z (Reading database ... 65% 2021-05-15T22:37:23.7787093Z (Reading database ... 70% 2021-05-15T22:37:23.7903386Z (Reading database ... 75% 2021-05-15T22:37:23.7932552Z (Reading database ... 80% 2021-05-15T22:37:23.8478904Z (Reading database ... 85% 2021-05-15T22:37:23.8645455Z (Reading database ... 90% 2021-05-15T22:37:23.8718944Z (Reading database ... 95% 2021-05-15T22:37:23.8722655Z (Reading database ... 100% 2021-05-15T22:37:23.8724523Z (Reading database ... 268550 files and directories currently installed.) 2021-05-15T22:37:23.8823165Z Preparing to unpack .../libsodium-dev_1.0.18-1_amd64.deb ... 2021-05-15T22:37:23.8838980Z Unpacking libsodium-dev:amd64 (1.0.18-1) ... 2021-05-15T22:37:23.9633972Z Setting up libsodium-dev:amd64 (1.0.18-1) ... 2021-05-15T22:37:25.8888884Z Reading package lists... 2021-05-15T22:37:26.0637753Z Building dependency tree... 2021-05-15T22:37:26.0657936Z Reading state information... 2021-05-15T22:37:26.2326897Z The following additional packages will be installed: 2021-05-15T22:37:26.2329943Z libarchive-dev liblept5 libtesseract4 tesseract-ocr tesseract-ocr-osd 2021-05-15T22:37:26.2844139Z The following NEW packages will be installed: 2021-05-15T22:37:26.2850060Z libarchive-dev liblept5 libleptonica-dev libtesseract-dev libtesseract4 2021-05-15T22:37:26.2851657Z tesseract-ocr tesseract-ocr-eng tesseract-ocr-osd 2021-05-15T22:37:26.3047075Z 0 upgraded, 8 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:37:26.3049115Z Need to get 10.4 MB of archives. 2021-05-15T22:37:26.3050551Z After this operation, 38.0 MB of additional disk space will be used. 2021-05-15T22:37:26.3052674Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-dev amd64 3.4.0-2ubuntu1 [490 kB] 2021-05-15T22:37:26.3172603Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblept5 amd64 1.79.0-1 [999 kB] 2021-05-15T22:37:26.3903360Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libleptonica-dev amd64 1.79.0-1 [1389 kB] 2021-05-15T22:37:26.7263827Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract4 amd64 4.1.1-2build2 [1237 kB] 2021-05-15T22:37:26.7539441Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract-dev amd64 4.1.1-2build2 [1463 kB] 2021-05-15T22:37:26.8191551Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-eng all 1:4.00~git30-7274cfa-1 [1598 kB] 2021-05-15T22:37:26.8504510Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-osd all 1:4.00~git30-7274cfa-1 [2990 kB] 2021-05-15T22:37:26.9124361Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr amd64 4.1.1-2build2 [262 kB] 2021-05-15T22:37:27.3877676Z Fetched 10.4 MB in 1s (16.6 MB/s) 2021-05-15T22:37:27.4242572Z Selecting previously unselected package libarchive-dev:amd64. 2021-05-15T22:37:27.4322355Z (Reading database ... 2021-05-15T22:37:27.4323226Z (Reading database ... 5% 2021-05-15T22:37:27.4323987Z (Reading database ... 10% 2021-05-15T22:37:27.4324796Z (Reading database ... 15% 2021-05-15T22:37:27.4325533Z (Reading database ... 20% 2021-05-15T22:37:27.4326302Z (Reading database ... 25% 2021-05-15T22:37:27.4327041Z (Reading database ... 30% 2021-05-15T22:37:27.4327793Z (Reading database ... 35% 2021-05-15T22:37:27.4328532Z (Reading database ... 40% 2021-05-15T22:37:27.4329259Z (Reading database ... 45% 2021-05-15T22:37:27.4330011Z (Reading database ... 50% 2021-05-15T22:37:27.4357791Z (Reading database ... 55% 2021-05-15T22:37:27.4412834Z (Reading database ... 60% 2021-05-15T22:37:27.4441829Z (Reading database ... 65% 2021-05-15T22:37:27.4594794Z (Reading database ... 70% 2021-05-15T22:37:27.4743148Z (Reading database ... 75% 2021-05-15T22:37:27.4770315Z (Reading database ... 80% 2021-05-15T22:37:27.5382464Z (Reading database ... 85% 2021-05-15T22:37:27.5581730Z (Reading database ... 90% 2021-05-15T22:37:27.5671464Z (Reading database ... 95% 2021-05-15T22:37:27.5672260Z (Reading database ... 100% 2021-05-15T22:37:27.5673382Z (Reading database ... 268620 files and directories currently installed.) 2021-05-15T22:37:27.5795391Z Preparing to unpack .../0-libarchive-dev_3.4.0-2ubuntu1_amd64.deb ... 2021-05-15T22:37:27.5814160Z Unpacking libarchive-dev:amd64 (3.4.0-2ubuntu1) ... 2021-05-15T22:37:27.6707764Z Selecting previously unselected package liblept5:amd64. 2021-05-15T22:37:27.6941035Z Preparing to unpack .../1-liblept5_1.79.0-1_amd64.deb ... 2021-05-15T22:37:27.6966261Z Unpacking liblept5:amd64 (1.79.0-1) ... 2021-05-15T22:37:27.8268900Z Selecting previously unselected package libleptonica-dev:amd64. 2021-05-15T22:37:27.8532176Z Preparing to unpack .../2-libleptonica-dev_1.79.0-1_amd64.deb ... 2021-05-15T22:37:27.8548655Z Unpacking libleptonica-dev:amd64 (1.79.0-1) ... 2021-05-15T22:37:28.0268620Z Selecting previously unselected package libtesseract4:amd64. 2021-05-15T22:37:28.0523633Z Preparing to unpack .../3-libtesseract4_4.1.1-2build2_amd64.deb ... 2021-05-15T22:37:28.0537540Z Unpacking libtesseract4:amd64 (4.1.1-2build2) ... 2021-05-15T22:37:28.2069221Z Selecting previously unselected package libtesseract-dev:amd64. 2021-05-15T22:37:28.2355467Z Preparing to unpack .../4-libtesseract-dev_4.1.1-2build2_amd64.deb ... 2021-05-15T22:37:28.2371520Z Unpacking libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-05-15T22:37:28.4308351Z Selecting previously unselected package tesseract-ocr-eng. 2021-05-15T22:37:28.4550006Z Preparing to unpack .../5-tesseract-ocr-eng_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-05-15T22:37:28.4570133Z Unpacking tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-05-15T22:37:28.6470072Z Selecting previously unselected package tesseract-ocr-osd. 2021-05-15T22:37:28.6767330Z Preparing to unpack .../6-tesseract-ocr-osd_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-05-15T22:37:28.6784341Z Unpacking tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-05-15T22:37:29.0868895Z Selecting previously unselected package tesseract-ocr. 2021-05-15T22:37:29.1116555Z Preparing to unpack .../7-tesseract-ocr_4.1.1-2build2_amd64.deb ... 2021-05-15T22:37:29.1125709Z Unpacking tesseract-ocr (4.1.1-2build2) ... 2021-05-15T22:37:29.2092645Z Setting up tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-05-15T22:37:29.2128880Z Setting up liblept5:amd64 (1.79.0-1) ... 2021-05-15T22:37:29.2170388Z Setting up libleptonica-dev:amd64 (1.79.0-1) ... 2021-05-15T22:37:29.2200679Z Setting up libtesseract4:amd64 (4.1.1-2build2) ... 2021-05-15T22:37:29.2247002Z Setting up libarchive-dev:amd64 (3.4.0-2ubuntu1) ... 2021-05-15T22:37:29.2280251Z Setting up tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-05-15T22:37:29.2317518Z Setting up libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-05-15T22:37:29.2359272Z Setting up tesseract-ocr (4.1.1-2build2) ... 2021-05-15T22:37:29.2393484Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:37:32.4274979Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:37:34.4685315Z Reading package lists... 2021-05-15T22:37:34.6079286Z Building dependency tree... 2021-05-15T22:37:34.6098945Z Reading state information... 2021-05-15T22:37:34.8234580Z wget is already the newest version (1.20.3-1ubuntu1). 2021-05-15T22:37:34.8235809Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:37:34.8831717Z Reading package lists... 2021-05-15T22:37:35.0198306Z Building dependency tree... 2021-05-15T22:37:35.0217030Z Reading state information... 2021-05-15T22:37:35.1614955Z The following additional packages will be installed: 2021-05-15T22:37:35.1619161Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-05-15T22:37:35.1622098Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev 2021-05-15T22:37:35.1625085Z Suggested packages: 2021-05-15T22:37:35.1627919Z doc-base krb5-doc krb5-user libnorm-doc 2021-05-15T22:37:35.2102964Z The following NEW packages will be installed: 2021-05-15T22:37:35.2105445Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-05-15T22:37:35.2109948Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev libzmq3-dev 2021-05-15T22:37:35.2309776Z 0 upgraded, 10 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:37:35.2326478Z Need to get 1459 kB of archives. 2021-05-15T22:37:35.2329002Z After this operation, 7754 kB of additional disk space will be used. 2021-05-15T22:37:35.2331305Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgssrpc4 amd64 1.17-6ubuntu4.1 [55.4 kB] 2021-05-15T22:37:35.2346295Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkdb5-9 amd64 1.17-6ubuntu4.1 [37.3 kB] 2021-05-15T22:37:35.2363385Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5srv-mit11 amd64 1.17-6ubuntu4.1 [49.5 kB] 2021-05-15T22:37:35.2392988Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5clnt-mit11 amd64 1.17-6ubuntu4.1 [37.6 kB] 2021-05-15T22:37:35.2412691Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 comerr-dev amd64 2.1-1.45.5-2ubuntu1 [39.9 kB] 2021-05-15T22:37:35.2434723Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 krb5-multidev amd64 1.17-6ubuntu4.1 [120 kB] 2021-05-15T22:37:35.2472365Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnorm-dev amd64 1.5.8+dfsg2-2build1 [463 kB] 2021-05-15T22:37:35.2585955Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpgm-dev amd64 5.2.122~dfsg-3ubuntu1 [189 kB] 2021-05-15T22:37:35.2633482Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkrb5-dev amd64 1.17-6ubuntu4.1 [11.7 kB] 2021-05-15T22:37:35.2639009Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzmq3-dev amd64 4.3.2-2ubuntu1 [455 kB] 2021-05-15T22:37:35.6660636Z Fetched 1459 kB in 0s (24.4 MB/s) 2021-05-15T22:37:35.7004364Z Selecting previously unselected package libgssrpc4:amd64. 2021-05-15T22:37:35.7075874Z (Reading database ... 2021-05-15T22:37:35.7076592Z (Reading database ... 5% 2021-05-15T22:37:35.7077241Z (Reading database ... 10% 2021-05-15T22:37:35.7077930Z (Reading database ... 15% 2021-05-15T22:37:35.7078552Z (Reading database ... 20% 2021-05-15T22:37:35.7079216Z (Reading database ... 25% 2021-05-15T22:37:35.7079849Z (Reading database ... 30% 2021-05-15T22:37:35.7080479Z (Reading database ... 35% 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2021-05-15T22:37:35.8668508Z Selecting previously unselected package libkdb5-9:amd64. 2021-05-15T22:37:35.8936435Z Preparing to unpack .../1-libkdb5-9_1.17-6ubuntu4.1_amd64.deb ... 2021-05-15T22:37:35.8956326Z Unpacking libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T22:37:35.9347881Z Selecting previously unselected package libkadm5srv-mit11:amd64. 2021-05-15T22:37:35.9565319Z Preparing to unpack .../2-libkadm5srv-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-05-15T22:37:35.9579696Z Unpacking libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T22:37:35.9988745Z Selecting previously unselected package libkadm5clnt-mit11:amd64. 2021-05-15T22:37:36.0203877Z Preparing to unpack .../3-libkadm5clnt-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-05-15T22:37:36.0216134Z Unpacking libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T22:37:36.0588365Z Selecting previously unselected package comerr-dev:amd64. 2021-05-15T22:37:36.0836675Z Preparing to unpack .../4-comerr-dev_2.1-1.45.5-2ubuntu1_amd64.deb ... 2021-05-15T22:37:36.0881793Z Unpacking comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-05-15T22:37:36.1272512Z Selecting previously unselected package krb5-multidev:amd64. 2021-05-15T22:37:36.1512402Z Preparing to unpack .../5-krb5-multidev_1.17-6ubuntu4.1_amd64.deb ... 2021-05-15T22:37:36.1524665Z Unpacking krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T22:37:36.1908364Z Selecting previously unselected package libnorm-dev:amd64. 2021-05-15T22:37:36.2176789Z Preparing to unpack .../6-libnorm-dev_1.5.8+dfsg2-2build1_amd64.deb ... 2021-05-15T22:37:36.2197105Z Unpacking libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-05-15T22:37:36.3028122Z Selecting previously unselected package libpgm-dev:amd64. 2021-05-15T22:37:36.3257388Z Preparing to unpack .../7-libpgm-dev_5.2.122~dfsg-3ubuntu1_amd64.deb ... 2021-05-15T22:37:36.3272317Z Unpacking libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-05-15T22:37:36.3747962Z Selecting previously unselected package libkrb5-dev:amd64. 2021-05-15T22:37:36.3999626Z Preparing to unpack .../8-libkrb5-dev_1.17-6ubuntu4.1_amd64.deb ... 2021-05-15T22:37:36.4016219Z Unpacking libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T22:37:36.4347764Z Selecting previously unselected package libzmq3-dev:amd64. 2021-05-15T22:37:36.4566979Z Preparing to unpack .../9-libzmq3-dev_4.3.2-2ubuntu1_amd64.deb ... 2021-05-15T22:37:36.4579545Z Unpacking libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-05-15T22:37:36.5647508Z Setting up libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-05-15T22:37:36.5698200Z Setting up libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T22:37:36.5744920Z Setting up libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-05-15T22:37:36.5772173Z Setting up comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-05-15T22:37:36.5813685Z Setting up libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T22:37:36.5860894Z Setting up libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T22:37:36.5892825Z Setting up libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T22:37:36.5922705Z Setting up krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T22:37:36.5953625Z Setting up libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T22:37:36.5980195Z Setting up libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-05-15T22:37:36.6014611Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:37:36.6217077Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:37:39.9196910Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-15T22:37:42.2249374Z Reading package lists... 2021-05-15T22:37:42.3791233Z Building dependency tree... 2021-05-15T22:37:42.3811176Z Reading state information... 2021-05-15T22:37:42.4992622Z E: Unable to locate package udunits 2021-05-15T22:37:42.5615336Z Reading package lists... 2021-05-15T22:37:42.7069344Z Building dependency tree... 2021-05-15T22:37:42.7093651Z Reading state information... 2021-05-15T22:37:42.8511783Z The following additional packages will be installed: 2021-05-15T22:37:42.8513903Z libwebpdemux2 2021-05-15T22:37:42.8963389Z The following NEW packages will be installed: 2021-05-15T22:37:42.8965299Z libwebp-dev libwebpdemux2 2021-05-15T22:37:42.9173263Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:37:42.9174292Z Need to get 277 kB of archives. 2021-05-15T22:37:42.9175527Z After this operation, 965 kB of additional disk space will be used. 2021-05-15T22:37:42.9177420Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwebpdemux2 amd64 0.6.1-2 [9472 B] 2021-05-15T22:37:42.9193244Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwebp-dev amd64 0.6.1-2 [267 kB] 2021-05-15T22:37:43.3366032Z Fetched 277 kB in 0s (11.8 MB/s) 2021-05-15T22:37:43.3728898Z Selecting previously unselected package libwebpdemux2:amd64. 2021-05-15T22:37:43.3804095Z (Reading database ... 2021-05-15T22:37:43.3804993Z (Reading database ... 5% 2021-05-15T22:37:43.3805850Z (Reading 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... 100% 2021-05-15T22:37:43.4956704Z (Reading database ... 269145 files and directories currently installed.) 2021-05-15T22:37:43.5060174Z Preparing to unpack .../libwebpdemux2_0.6.1-2_amd64.deb ... 2021-05-15T22:37:43.5080912Z Unpacking libwebpdemux2:amd64 (0.6.1-2) ... 2021-05-15T22:37:43.5319924Z Selecting previously unselected package libwebp-dev:amd64. 2021-05-15T22:37:43.5586369Z Preparing to unpack .../libwebp-dev_0.6.1-2_amd64.deb ... 2021-05-15T22:37:43.5597613Z Unpacking libwebp-dev:amd64 (0.6.1-2) ... 2021-05-15T22:37:43.6476267Z Setting up libwebpdemux2:amd64 (0.6.1-2) ... 2021-05-15T22:37:43.6508957Z Setting up libwebp-dev:amd64 (0.6.1-2) ... 2021-05-15T22:37:43.6540256Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:37:45.6849285Z Reading package lists... 2021-05-15T22:37:45.8252596Z Building dependency tree... 2021-05-15T22:37:45.8272581Z Reading state information... 2021-05-15T22:37:45.9733383Z The following additional packages will be installed: 2021-05-15T22:37:45.9735363Z gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-05-15T22:37:45.9736732Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-05-15T22:37:45.9737803Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-05-15T22:37:45.9742237Z Suggested packages: 2021-05-15T22:37:45.9743009Z cargo-doc gdb-doc gdbserver rust-doc rust-src 2021-05-15T22:37:45.9743611Z Recommended packages: 2021-05-15T22:37:45.9744068Z cargo 2021-05-15T22:37:46.0197414Z The following NEW packages will be installed: 2021-05-15T22:37:46.0201763Z cargo gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-05-15T22:37:46.0203487Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-05-15T22:37:46.0205000Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-05-15T22:37:46.0457774Z 0 upgraded, 13 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:37:46.0458976Z Need to get 108 MB of archives. 2021-05-15T22:37:46.0459755Z After this operation, 501 MB of additional disk space will be used. 2021-05-15T22:37:46.0461657Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libbabeltrace1 amd64 1.5.8-1build1 [156 kB] 2021-05-15T22:37:46.0502140Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libipt2 amd64 2.0.1-1 [42.8 kB] 2021-05-15T22:37:46.0509792Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight-common all 3.1.8-1.2build5 [50.7 kB] 2021-05-15T22:37:46.0523175Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libboost-regex1.71.0 amd64 1.71.0-6ubuntu6 [471 kB] 2021-05-15T22:37:46.0564828Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight4v5 amd64 3.1.8-1.2build5 [232 kB] 2021-05-15T22:37:46.0592280Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxxhash0 amd64 0.7.3-1 [15.3 kB] 2021-05-15T22:37:46.0662603Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-1.47 amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [59.6 MB] 2021-05-15T22:37:46.2003580Z Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal/main amd64 gdb amd64 10.2-0ubuntu1~20.04~1 [3282 kB] 2021-05-15T22:37:48.9542775Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-dev amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [28.5 MB] 2021-05-15T22:37:50.3021143Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rustc amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [1921 kB] 2021-05-15T22:37:50.4359025Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 cargo amd64 0.47.0-1~exp1ubuntu1~20.04.1 [3147 kB] 2021-05-15T22:37:50.6151977Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libc6-dbg amd64 2.31-0ubuntu9.2 [10.5 MB] 2021-05-15T22:37:50.7888429Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rust-gdb all 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [27.5 kB] 2021-05-15T22:37:51.2215575Z Fetched 108 MB in 5s (22.7 MB/s) 2021-05-15T22:37:51.2577063Z Selecting previously unselected package libbabeltrace1:amd64. 2021-05-15T22:37:51.2659185Z (Reading database ... 2021-05-15T22:37:51.2660144Z (Reading database ... 5% 2021-05-15T22:37:51.2660909Z (Reading database ... 10% 2021-05-15T22:37:51.2661729Z (Reading database ... 15% 2021-05-15T22:37:51.2662495Z (Reading database ... 20% 2021-05-15T22:37:51.2663241Z (Reading database ... 25% 2021-05-15T22:37:51.2664209Z (Reading database ... 30% 2021-05-15T22:37:51.2664946Z (Reading database ... 35% 2021-05-15T22:37:51.2665700Z (Reading database ... 40% 2021-05-15T22:37:51.2667183Z (Reading database ... 45% 2021-05-15T22:37:51.2667985Z (Reading database ... 50% 2021-05-15T22:37:51.2707462Z (Reading database ... 55% 2021-05-15T22:37:51.2757169Z (Reading database ... 60% 2021-05-15T22:37:51.2791160Z (Reading database ... 65% 2021-05-15T22:37:51.2928276Z (Reading database ... 70% 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.../02-libsource-highlight-common_3.1.8-1.2build5_all.deb ... 2021-05-15T22:37:51.5393097Z Unpacking libsource-highlight-common (3.1.8-1.2build5) ... 2021-05-15T22:37:51.5847864Z Selecting previously unselected package libboost-regex1.71.0:amd64. 2021-05-15T22:37:51.6142868Z Preparing to unpack .../03-libboost-regex1.71.0_1.71.0-6ubuntu6_amd64.deb ... 2021-05-15T22:37:51.6159732Z Unpacking libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-05-15T22:37:51.6988200Z Selecting previously unselected package libsource-highlight4v5. 2021-05-15T22:37:51.7236456Z Preparing to unpack .../04-libsource-highlight4v5_3.1.8-1.2build5_amd64.deb ... 2021-05-15T22:37:51.7246864Z Unpacking libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-05-15T22:37:51.7787610Z Selecting previously unselected package libxxhash0:amd64. 2021-05-15T22:37:51.8031423Z Preparing to unpack .../05-libxxhash0_0.7.3-1_amd64.deb ... 2021-05-15T22:37:51.8042480Z Unpacking libxxhash0:amd64 (0.7.3-1) ... 2021-05-15T22:37:51.8387321Z Selecting previously unselected package gdb. 2021-05-15T22:37:51.8602859Z Preparing to unpack .../06-gdb_10.2-0ubuntu1~20.04~1_amd64.deb ... 2021-05-15T22:37:51.8613554Z Unpacking gdb (10.2-0ubuntu1~20.04~1) ... 2021-05-15T22:37:52.2047740Z Selecting previously unselected package libstd-rust-1.47:amd64. 2021-05-15T22:37:52.2338484Z Preparing to unpack .../07-libstd-rust-1.47_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-05-15T22:37:52.2352473Z Unpacking libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-15T22:37:58.8791310Z Selecting previously unselected package libstd-rust-dev:amd64. 2021-05-15T22:37:58.9065857Z Preparing to unpack .../08-libstd-rust-dev_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-05-15T22:37:58.9078397Z Unpacking libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-15T22:38:01.9268102Z Selecting previously unselected package rustc. 2021-05-15T22:38:01.9513463Z Preparing to unpack .../09-rustc_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-05-15T22:38:01.9526717Z Unpacking rustc (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-15T22:38:02.1467961Z Selecting previously unselected package cargo. 2021-05-15T22:38:02.1700549Z Preparing to unpack .../10-cargo_0.47.0-1~exp1ubuntu1~20.04.1_amd64.deb ... 2021-05-15T22:38:02.1719870Z Unpacking cargo (0.47.0-1~exp1ubuntu1~20.04.1) ... 2021-05-15T22:38:02.5302932Z Selecting previously unselected package libc6-dbg:amd64. 2021-05-15T22:38:02.5569426Z Preparing to unpack .../11-libc6-dbg_2.31-0ubuntu9.2_amd64.deb ... 2021-05-15T22:38:02.5581630Z Unpacking libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-05-15T22:38:03.7228829Z Selecting previously unselected package rust-gdb. 2021-05-15T22:38:03.7508016Z Preparing to unpack .../12-rust-gdb_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_all.deb ... 2021-05-15T22:38:03.7526428Z Unpacking rust-gdb (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-15T22:38:03.8175449Z Setting up libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-15T22:38:03.8215427Z Setting up libsource-highlight-common (3.1.8-1.2build5) ... 2021-05-15T22:38:03.8264803Z Setting up libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-05-15T22:38:03.8295968Z Setting up libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-15T22:38:03.8322324Z Setting up libipt2 (2.0.1-1) ... 2021-05-15T22:38:03.8355754Z Setting up libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-05-15T22:38:03.8383258Z Setting up libbabeltrace1:amd64 (1.5.8-1build1) ... 2021-05-15T22:38:03.8414445Z Setting up rustc (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-15T22:38:03.8447833Z Setting up libxxhash0:amd64 (0.7.3-1) ... 2021-05-15T22:38:03.8496092Z Setting up libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-05-15T22:38:03.8525024Z Setting up cargo (0.47.0-1~exp1ubuntu1~20.04.1) ... 2021-05-15T22:38:03.8563416Z Setting up gdb (10.2-0ubuntu1~20.04~1) ... 2021-05-15T22:38:03.8654804Z Setting up rust-gdb (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-15T22:38:03.8687441Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:38:03.8885531Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:38:06.9188034Z Reading package lists... 2021-05-15T22:38:07.0952675Z Building dependency tree... 2021-05-15T22:38:07.0972060Z Reading state information... 2021-05-15T22:38:07.2583157Z The following additional packages will be installed: 2021-05-15T22:38:07.2586615Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-05-15T22:38:07.2589369Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-05-15T22:38:07.2591443Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-05-15T22:38:07.2592864Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-05-15T22:38:07.2594296Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-05-15T22:38:07.2595683Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-05-15T22:38:07.2596931Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-05-15T22:38:07.2598392Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-05-15T22:38:07.2599874Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-05-15T22:38:07.2602873Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-05-15T22:38:07.2604410Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-05-15T22:38:07.2605861Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-05-15T22:38:07.2607414Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-05-15T22:38:07.2609123Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-05-15T22:38:07.2610757Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-05-15T22:38:07.2612902Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-05-15T22:38:07.2614378Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-05-15T22:38:07.2615869Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-05-15T22:38:07.2617421Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-05-15T22:38:07.2618692Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-05-15T22:38:07.2619928Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-05-15T22:38:07.2621221Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-05-15T22:38:07.2622456Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-05-15T22:38:07.2624551Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-05-15T22:38:07.2625835Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-05-15T22:38:07.2706604Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-05-15T22:38:07.2707904Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-05-15T22:38:07.2709144Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-05-15T22:38:07.2710393Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-05-15T22:38:07.2711566Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-05-15T22:38:07.2712683Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-05-15T22:38:07.2713765Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-05-15T22:38:07.2714918Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-05-15T22:38:07.2716129Z python3-cycler python3-dateutil python3-decorator python3-future 2021-05-15T22:38:07.2717428Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-05-15T22:38:07.2718709Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-05-15T22:38:07.2719915Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-05-15T22:38:07.2721073Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-05-15T22:38:07.2722208Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-05-15T22:38:07.2723423Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-05-15T22:38:07.2725359Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-05-15T22:38:07.2727493Z python3-webencodings qdoc-qt5 qgis-common qgis-plugin-grass 2021-05-15T22:38:07.2728914Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-05-15T22:38:07.2730596Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-05-15T22:38:07.2732336Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-05-15T22:38:07.2733840Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-05-15T22:38:07.2735302Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-05-15T22:38:07.2736893Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-05-15T22:38:07.2738338Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-05-15T22:38:07.2739061Z Suggested packages: 2021-05-15T22:38:07.2740103Z avahi-autoipd blt-demo libgdal-grass grass-dev grass-gui e00compr avce00 2021-05-15T22:38:07.2741365Z gnuplot gpsbabel gpstrans netpbm python3-rpy2 python3-termcolor grass 2021-05-15T22:38:07.2742950Z grass-dev-doc gvfs exiv2 geotiff-bin libgeotiff-epsg libvisual-0.4-plugins 2021-05-15T22:38:07.2744587Z libhdf4-doc libhdf4-alt-dev hdf4-tools libjs-jquery-ui-docs avahi-autoipd 2021-05-15T22:38:07.2745903Z | zeroconf ogdi-bin pcscd libqscintilla2-doc qtwayland5 2021-05-15T22:38:07.2747392Z qt5-qmltooling-plugins pinentry-doc python-cycler-doc python-future-doc 2021-05-15T22:38:07.2748791Z python3-genshi python3-lxml-dbg python-lxml-doc dvipng gir1.2-gtk-3.0 2021-05-15T22:38:07.2750415Z inkscape ipython3 python-matplotlib-doc python3-cairocffi python3-gi-cairo 2021-05-15T22:38:07.2751834Z python3-gobject python3-nose python3-scipy python3-tornado 2021-05-15T22:38:07.2753313Z texlive-extra-utils texlive-latex-extra ttf-staypuft python-numpy-doc 2021-05-15T22:38:07.2754798Z python3-pytest python3-numpy-dbg owslib-doc python-pil-doc python3-pil-dbg 2021-05-15T22:38:07.2756292Z python3-pandas python3-ipykernel python-psycopg2-doc python-pyparsing-doc 2021-05-15T22:38:07.2757697Z python3-pyqt5-dbg otb-qgis saga tix python3-tk-dbg qt5-doc comgt wvdial 2021-05-15T22:38:07.2758721Z wpagui libengine-pkcs11-openssl 2021-05-15T22:38:07.3504827Z The following NEW packages will be installed: 2021-05-15T22:38:07.3510143Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-05-15T22:38:07.3513944Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-05-15T22:38:07.3517080Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-05-15T22:38:07.3520041Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-05-15T22:38:07.3523120Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-05-15T22:38:07.3526068Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-05-15T22:38:07.3528769Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-05-15T22:38:07.3535386Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-05-15T22:38:07.3538303Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-05-15T22:38:07.3540886Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-05-15T22:38:07.3543569Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-05-15T22:38:07.3546676Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-05-15T22:38:07.3549595Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-05-15T22:38:07.3552759Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-05-15T22:38:07.3555779Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-05-15T22:38:07.3558638Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-05-15T22:38:07.3561351Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-05-15T22:38:07.3564202Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-05-15T22:38:07.3567080Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-05-15T22:38:07.3569420Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-05-15T22:38:07.3571701Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-05-15T22:38:07.3574120Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-05-15T22:38:07.3576413Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-05-15T22:38:07.3578571Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-05-15T22:38:07.3580766Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-05-15T22:38:07.3583386Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-05-15T22:38:07.3586164Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-05-15T22:38:07.3589029Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-05-15T22:38:07.3592052Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-05-15T22:38:07.3594649Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-05-15T22:38:07.3597056Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-05-15T22:38:07.3598612Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-05-15T22:38:07.3600061Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-05-15T22:38:07.3601533Z python3-cycler python3-dateutil python3-decorator python3-future 2021-05-15T22:38:07.3603126Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-05-15T22:38:07.3604718Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-05-15T22:38:07.3606208Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-05-15T22:38:07.3607714Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-05-15T22:38:07.3609022Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-05-15T22:38:07.3610757Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-05-15T22:38:07.3612164Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-05-15T22:38:07.3613594Z python3-webencodings qdoc-qt5 qgis qgis-common qgis-plugin-grass 2021-05-15T22:38:07.3614913Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-05-15T22:38:07.3616472Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-05-15T22:38:07.3618069Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-05-15T22:38:07.3619461Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-05-15T22:38:07.3620829Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-05-15T22:38:07.3622303Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-05-15T22:38:07.3623565Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-05-15T22:38:07.3785875Z 0 upgraded, 214 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:38:07.3787328Z Need to get 183 MB of archives. 2021-05-15T22:38:07.3788130Z After this operation, 776 MB of additional disk space will be used. 2021-05-15T22:38:07.3790156Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdouble-conversion3 amd64 3.1.5-4ubuntu1 [37.9 kB] 2021-05-15T22:38:07.3814433Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5core5a amd64 5.12.8+dfsg-0ubuntu1 [2005 kB] 2021-05-15T22:38:07.4223006Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl-mesa0 amd64 20.2.6-0ubuntu0.20.04.1 [97.7 kB] 2021-05-15T22:38:07.4238355Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl1 amd64 1.3.2-1~ubuntu0.20.04.1 [31.9 kB] 2021-05-15T22:38:07.4246835Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libevdev2 amd64 1.9.0+dfsg-1ubuntu0.1 [31.6 kB] 2021-05-15T22:38:07.4253454Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmtdev1 amd64 1.1.5-1.1 [14.2 kB] 2021-05-15T22:38:07.4258895Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-common all 1.3-2ubuntu3 [45.3 kB] 2021-05-15T22:38:07.4269175Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom2 amd64 1.3-2ubuntu3 [20.0 kB] 2021-05-15T22:38:07.4279133Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput-bin amd64 1.15.5-1ubuntu0.2 [19.1 kB] 2021-05-15T22:38:07.4289421Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput10 amd64 1.15.5-1ubuntu0.2 [112 kB] 2021-05-15T22:38:07.4317218Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5dbus5 amd64 5.12.8+dfsg-0ubuntu1 [208 kB] 2021-05-15T22:38:07.4353759Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5network5 amd64 5.12.8+dfsg-0ubuntu1 [674 kB] 2021-05-15T22:38:07.4468867Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [10.8 kB] 2021-05-15T22:38:07.4474833Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-util1 amd64 0.4.0-0ubuntu3 [11.2 kB] 2021-05-15T22:38:07.4481030Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-image0 amd64 0.4.0-1build1 [12.3 kB] 2021-05-15T22:38:07.4487286Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-keysyms1 amd64 0.4.0-1build1 [8452 B] 2021-05-15T22:38:07.4492377Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-randr0 amd64 1.14-2 [16.3 kB] 2021-05-15T22:38:07.4498832Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-render-util0 amd64 0.3.9-1build1 [9912 B] 2021-05-15T22:38:07.4503427Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinerama0 amd64 1.14-2 [5260 B] 2021-05-15T22:38:07.4509972Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinput0 amd64 1.14-2 [29.3 kB] 2021-05-15T22:38:07.4515964Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xkb1 amd64 1.14-2 [29.6 kB] 2021-05-15T22:38:07.4529784Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxkbcommon-x11-0 amd64 0.10.0-1 [13.4 kB] 2021-05-15T22:38:07.4535707Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5gui5 amd64 5.12.8+dfsg-0ubuntu1 [2971 kB] 2021-05-15T22:38:07.5110868Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5widgets5 amd64 5.12.8+dfsg-0ubuntu1 [2293 kB] 2021-05-15T22:38:07.5468794Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5svg5 amd64 5.12.8-0ubuntu1 [131 kB] 2021-05-15T22:38:07.5578583Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liborc-0.4-0 amd64 1:0.4.31-1 [188 kB] 2021-05-15T22:38:07.5674172Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgstreamer-plugins-base1.0-0 amd64 1.16.2-4 [735 kB] 2021-05-15T22:38:07.6502289Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhyphen0 amd64 2.8.8-7 [27.0 kB] 2021-05-15T22:38:07.6553208Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5positioning5 amd64 5.12.8+dfsg-0ubuntu1 [197 kB] 2021-05-15T22:38:07.6651426Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5printsupport5 amd64 5.12.8+dfsg-0ubuntu1 [193 kB] 2021-05-15T22:38:07.6684474Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5qml5 amd64 5.12.8-0ubuntu1 [1438 kB] 2021-05-15T22:38:07.6918840Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quick5 amd64 5.12.8-0ubuntu1 [1335 kB] 2021-05-15T22:38:07.7198687Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sensors5 amd64 5.12.8-0ubuntu1 [114 kB] 2021-05-15T22:38:07.7325446Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webchannel5 amd64 5.12.8-0ubuntu1 [51.2 kB] 2021-05-15T22:38:07.7633841Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwoff1 amd64 1.0.2-1build2 [42.0 kB] 2021-05-15T22:38:07.7691935Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webkit5 amd64 5.212.0~alpha4-1ubuntu2 [12.1 MB] 2021-05-15T22:38:08.1968240Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-image-formats-plugins amd64 5.12.8-0ubuntu1 [43.4 kB] 2021-05-15T22:38:08.2386759Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers-common all 3.10.4+dfsg-1ubuntu2 [897 kB] 2021-05-15T22:38:08.3099376Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2 amd64 2.2.1-2build1 [307 kB] 2021-05-15T22:38:08.4190825Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2-plugins amd64 2.2.1-2build1 [191 kB] 2021-05-15T22:38:08.4293812Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5 amd64 5.12.8+dfsg-0ubuntu1 [121 kB] 2021-05-15T22:38:08.4355085Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5-sqlite amd64 5.12.8+dfsg-0ubuntu1 [47.5 kB] 2021-05-15T22:38:08.4426542Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-data all 3.0.4+dfsg-1build3 [186 kB] 2021-05-15T22:38:08.4563753Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarpack2 amd64 3.7.0-3 [92.8 kB] 2021-05-15T22:38:08.4662029Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsuperlu5 amd64 5.2.1+dfsg1-4 [159 kB] 2021-05-15T22:38:08.4780726Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarmadillo9 amd64 1:9.800.4+dfsg-1build1 [93.2 kB] 2021-05-15T22:38:08.4877909Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcfitsio8 amd64 3.470-3 [466 kB] 2021-05-15T22:38:08.5092314Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcharls2 amd64 2.0.0+dfsg-1build1 [74.1 kB] 2021-05-15T22:38:08.5243240Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdap25 amd64 3.20.5-1 [435 kB] 2021-05-15T22:38:08.5451172Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdapclient6v5 amd64 3.20.5-1 [92.2 kB] 2021-05-15T22:38:08.5561477Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libepsilon1 amd64 0.9.2+dfsg-4 [41.0 kB] 2021-05-15T22:38:08.5628990Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfreexl1 amd64 1.0.5-3 [33.4 kB] 2021-05-15T22:38:08.5693089Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfyba0 amd64 4.1.1-6build1 [113 kB] 2021-05-15T22:38:08.5809167Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-3.8.0 amd64 3.8.0-1build1 [535 kB] 2021-05-15T22:38:08.6056365Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-c1v5 amd64 3.8.0-1build1 [69.9 kB] 2021-05-15T22:38:08.6142113Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-data all 6.3.1-1 [7647 kB] 2021-05-15T22:38:08.8496266Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libproj15 amd64 6.3.1-1 [925 kB] 2021-05-15T22:38:08.8846484Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeotiff5 amd64 1.5.1-2 [53.1 kB] 2021-05-15T22:38:08.9074320Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf4-0-alt amd64 4.2.14-1ubuntu1 [268 kB] 2021-05-15T22:38:08.9171142Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libminizip1 amd64 1.1-8build1 [20.2 kB] 2021-05-15T22:38:08.9224427Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liburiparser1 amd64 0.9.3-2 [39.3 kB] 2021-05-15T22:38:08.9295250Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlbase1 amd64 1.3.0-8build1 [45.4 kB] 2021-05-15T22:38:08.9471339Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmldom1 amd64 1.3.0-8build1 [152 kB] 2021-05-15T22:38:08.9569240Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlengine1 amd64 1.3.0-8build1 [72.5 kB] 2021-05-15T22:38:08.9705244Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnetcdf15 amd64 1:4.7.3-1 [341 kB] 2021-05-15T22:38:08.9875638Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libogdi4.1 amd64 4.1.0+ds-1build1 [198 kB] 2021-05-15T22:38:09.0109230Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqhull7 amd64 2015.2-4 [152 kB] 2021-05-15T22:38:09.0245534Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialite7 amd64 4.3.0a-6build1 [1286 kB] 2021-05-15T22:38:09.0703638Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxerces-c3.2 amd64 3.2.2+debian-1build3 [878 kB] 2021-05-15T22:38:09.1001740Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgdal26 amd64 3.0.4+dfsg-1build3 [6156 kB] 2021-05-15T22:38:09.2885827Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5concurrent5 amd64 5.12.8+dfsg-0ubuntu1 [33.5 kB] 2021-05-15T22:38:09.2933000Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5keychain1 amd64 0.10.0-1build1 [48.4 kB] 2021-05-15T22:38:09.3373545Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5serialport5 amd64 5.12.8-0ubuntu1 [33.1 kB] 2021-05-15T22:38:09.3414893Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5xml5 amd64 5.12.8+dfsg-0ubuntu1 [105 kB] 2021-05-15T22:38:09.3476714Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialindex6 amd64 1.9.3-1build1 [266 kB] 2021-05-15T22:38:09.3626391Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzip5 amd64 1.5.1-0ubuntu1 [46.7 kB] 2021-05-15T22:38:09.4062418Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-core3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [5216 kB] 2021-05-15T22:38:09.6251894Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-native3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [44.5 kB] 2021-05-15T22:38:09.6311904Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-l10n all 2.11.2+dfsg-6 [41.3 kB] 2021-05-15T22:38:09.6386831Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-15 amd64 2.11.2+dfsg-6 [1238 kB] 2021-05-15T22:38:09.6877693Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quickwidgets5 amd64 5.12.8-0ubuntu1 [39.8 kB] 2021-05-15T22:38:09.6957498Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5opengl5 amd64 5.12.8+dfsg-0ubuntu1 [136 kB] 2021-05-15T22:38:09.7072247Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqwt-qt5-6 amd64 6.1.4-1.1build1 [427 kB] 2021-05-15T22:38:09.7623170Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-gui3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3195 kB] 2021-05-15T22:38:10.0429844Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers amd64 3.10.4+dfsg-1ubuntu2 [1940 kB] 2021-05-15T22:38:10.2822272Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-core7 amd64 0.7-4ubuntu7 [81.7 kB] 2021-05-15T22:38:10.3158353Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdaemon0 amd64 0.14-7 [13.9 kB] 2021-05-15T22:38:10.3207960Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 avahi-daemon amd64 0.7-4ubuntu7 [61.0 kB] 2021-05-15T22:38:10.3296669Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4 [572 kB] 2021-05-15T22:38:10.3555996Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 blt amd64 2.5.3+dfsg-4 [4944 B] 2021-05-15T22:38:10.4086631Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 fonts-lyx all 2.3.4.2-2 [154 kB] 2021-05-15T22:38:10.4300873Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgck-1-0 amd64 3.36.0-2build1 [75.5 kB] 2021-05-15T22:38:10.4409986Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-base-3-1 amd64 3.36.0-2build1 [193 kB] 2021-05-15T22:38:10.4953058Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-ui-3-1 amd64 3.36.0-2build1 [127 kB] 2021-05-15T22:38:10.5387574Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gcr amd64 3.36.0-2build1 [63.9 kB] 2021-05-15T22:38:10.5480792Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-numpy amd64 1:1.17.4-5ubuntu3 [2725 kB] 2021-05-15T22:38:10.6957231Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-gdal amd64 3.0.4+dfsg-1build3 [527 kB] 2021-05-15T22:38:10.7266166Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-bin amd64 3.0.4+dfsg-1build3 [256 kB] 2021-05-15T22:38:10.7441679Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-glib1 amd64 0.7-4ubuntu7 [7804 B] 2021-05-15T22:38:10.7491771Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmm-glib0 amd64 1.12.8-1 [185 kB] 2021-05-15T22:38:10.7686126Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 geoclue-2.0 amd64 2.5.6-0ubuntu1 [91.9 kB] 2021-05-15T22:38:10.7789110Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit-modules amd64 0.23.20-1ubuntu0.1 [231 kB] 2021-05-15T22:38:10.7845434Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit amd64 0.23.20-1ubuntu0.1 [93.8 kB] 2021-05-15T22:38:10.7861716Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 pinentry-gnome3 amd64 1.1.0-3build1 [38.6 kB] 2021-05-15T22:38:10.7873913Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring amd64 3.36.0-1ubuntu1 [613 kB] 2021-05-15T22:38:10.7983731Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring-pkcs11 amd64 3.36.0-1ubuntu1 [28.0 kB] 2021-05-15T22:38:10.8279338Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-doc all 7.8.2-1build3 [32.4 MB] 2021-05-15T22:38:12.1990327Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblaszip8 amd64 3.4.3-1build1 [125 kB] 2021-05-15T22:38:12.2016920Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-util9 amd64 2.0.1+ds-1build3 [68.5 kB] 2021-05-15T22:38:12.2287957Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-base9 amd64 2.0.1+ds-1build3 [1739 kB] 2021-05-15T22:38:12.3304416Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-core amd64 7.8.2-1build3 [5737 kB] 2021-05-15T22:38:12.6331801Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdparanoia0 amd64 3.10.2+debian-13 [46.7 kB] 2021-05-15T22:38:12.6340687Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvisual-0.4-0 amd64 0.4.0-17 [99.8 kB] 2021-05-15T22:38:12.6355045Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gstreamer1.0-plugins-base amd64 1.16.2-4 [619 kB] 2021-05-15T22:38:12.6409710Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 iio-sensor-proxy amd64 2.8-1ubuntu1 [35.8 kB] 2021-05-15T22:38:12.6420396Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libassimp5 amd64 5.0.1~ds0-1build1 [2775 kB] 2021-05-15T22:38:12.7025610Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libexiv2-27 amd64 0.27.2-8ubuntu2.2 [788 kB] 2021-05-15T22:38:12.7811087Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi0ldbl amd64 2.4.0-10build1 [155 kB] 2021-05-15T22:38:12.7946397Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi-bin amd64 2.4.0-10build1 [10.5 kB] 2021-05-15T22:38:12.7951273Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimagequant0 amd64 2.12.2-1.1 [31.4 kB] 2021-05-15T22:38:12.7958960Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] 2021-05-15T22:38:12.8006211Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-glib4 amd64 1.22.0-2 [101 kB] 2021-05-15T22:38:12.8035400Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-proxy amd64 1.22.0-2 [5908 B] 2021-05-15T22:38:12.8040128Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-genl-3-200 amd64 3.4.0-1 [11.1 kB] 2021-05-15T22:38:12.8045884Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-route-3-200 amd64 3.4.0-1 [149 kB] 2021-05-15T22:38:12.8064664Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnss-mdns amd64 0.14.1-1ubuntu1 [22.9 kB] 2021-05-15T22:38:12.8132636Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpam-gnome-keyring amd64 3.36.0-1ubuntu1 [23.3 kB] 2021-05-15T22:38:12.8154644Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpcsclite1 amd64 1.8.26-3 [22.0 kB] 2021-05-15T22:38:12.8543221Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-faux amd64 2.0.1+ds-1build3 [27.3 kB] 2021-05-15T22:38:12.8947756Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-icebridge amd64 2.0.1+ds-1build3 [42.8 kB] 2021-05-15T22:38:12.9364085Z Get:131 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-pgpointcloud amd64 2.0.1+ds-1build3 [75.3 kB] 2021-05-15T22:38:12.9832515Z Get:132 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-python amd64 2.0.1+ds-1build3 [136 kB] 2021-05-15T22:38:13.0007756Z Get:133 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsqlite3-mod-spatialite amd64 4.3.0a-6build1 [1265 kB] 2021-05-15T22:38:13.1854050Z Get:134 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-sqlite amd64 2.0.1+ds-1build3 [89.5 kB] 2021-05-15T22:38:13.2273158Z Get:135 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugins amd64 2.0.1+ds-1build3 [12.9 kB] 2021-05-15T22:38:13.2649772Z Get:136 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dcore5 amd64 5.12.8+dfsg-0ubuntu1 [137 kB] 2021-05-15T22:38:13.3392599Z Get:137 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53drender5 amd64 5.12.8+dfsg-0ubuntu1 [689 kB] 2021-05-15T22:38:13.4060600Z Get:138 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53danimation5 amd64 5.12.8+dfsg-0ubuntu1 [159 kB] 2021-05-15T22:38:13.4573140Z Get:139 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dinput5 amd64 5.12.8+dfsg-0ubuntu1 [125 kB] 2021-05-15T22:38:13.5030917Z Get:140 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dlogic5 amd64 5.12.8+dfsg-0ubuntu1 [25.9 kB] 2021-05-15T22:38:13.5427981Z Get:141 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dextras5 amd64 5.12.8+dfsg-0ubuntu1 [157 kB] 2021-05-15T22:38:13.5892468Z Get:142 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-assimpsceneimport-plugin amd64 5.12.8+dfsg-0ubuntu1 [45.2 kB] 2021-05-15T22:38:13.6310746Z Get:143 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-defaultgeometryloader-plugin amd64 5.12.8+dfsg-0ubuntu1 [33.3 kB] 2021-05-15T22:38:13.6700332Z Get:144 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-gltfsceneio-plugin amd64 5.12.8+dfsg-0ubuntu1 [110 kB] 2021-05-15T22:38:13.7124331Z Get:145 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dquickscene2d5 amd64 5.12.8+dfsg-0ubuntu1 [38.4 kB] 2021-05-15T22:38:13.7543283Z Get:146 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-scene2d-plugin amd64 5.12.8+dfsg-0ubuntu1 [17.1 kB] 2021-05-15T22:38:13.7945982Z Get:147 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-3d3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [224 kB] 2021-05-15T22:38:13.8422619Z Get:148 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-analysis3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [927 kB] 2021-05-15T22:38:13.9247558Z Get:149 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-app3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3060 kB] 2021-05-15T22:38:14.1007776Z Get:150 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtchooser amd64 66-2build1 [24.7 kB] 2021-05-15T22:38:14.1014616Z Get:151 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qdoc-qt5 amd64 5.12.8-0ubuntu1 [507 kB] 2021-05-15T22:38:14.1138430Z Get:152 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5help5 amd64 5.12.8-0ubuntu1 [134 kB] 2021-05-15T22:38:14.1175951Z Get:153 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qhelpgenerator-qt5 amd64 5.12.8-0ubuntu1 [64.3 kB] 2021-05-15T22:38:14.1190996Z Get:154 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-assistant amd64 5.12.8-0ubuntu1 [369 kB] 2021-05-15T22:38:14.1292692Z Get:155 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtattributionsscanner-qt5 amd64 5.12.8-0ubuntu1 [26.0 kB] 2021-05-15T22:38:14.1295500Z Get:156 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designer5 amd64 5.12.8-0ubuntu1 [2778 kB] 2021-05-15T22:38:14.1876665Z Get:157 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designercomponents5 amd64 5.12.8-0ubuntu1 [718 kB] 2021-05-15T22:38:14.2010693Z Get:158 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttools5-dev-tools amd64 5.12.8-0ubuntu1 [1031 kB] 2021-05-15T22:38:14.2780142Z Get:159 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-customwidgets amd64 3.10.4+dfsg-1ubuntu2 [3397 kB] 2021-05-15T22:38:14.4876573Z Get:160 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-server3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [311 kB] 2021-05-15T22:38:14.5387189Z Get:161 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgisgrass7-3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [228 kB] 2021-05-15T22:38:14.5868234Z Get:162 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgispython3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [43.1 kB] 2021-05-15T22:38:14.5903787Z Get:163 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-glib5 amd64 1.24.8-1 [529 kB] 2021-05-15T22:38:14.6036780Z Get:164 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-proxy amd64 1.24.8-1 [5856 B] 2021-05-15T22:38:14.6042774Z Get:165 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5test5 amd64 5.12.8+dfsg-0ubuntu1 [131 kB] 2021-05-15T22:38:14.6058647Z Get:166 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-bin amd64 1.3-2ubuntu3 [5484 B] 2021-05-15T22:38:14.6062697Z Get:167 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 modemmanager amd64 1.12.8-1 [755 kB] 2021-05-15T22:38:14.6276551Z Get:168 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 ttf-bitstream-vera all 1.10-8 [352 kB] 2021-05-15T22:38:14.6379443Z Get:169 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python-matplotlib-data all 3.1.2-1ubuntu4 [3788 kB] 2021-05-15T22:38:15.0460391Z Get:170 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-soupsieve all 1.9.5+dfsg-1 [29.1 kB] 2021-05-15T22:38:15.0534853Z Get:171 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-bs4 all 4.8.2-1 [83.0 kB] 2021-05-15T22:38:15.0599556Z Get:172 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-cycler all 0.10.0-3 [8132 B] 2021-05-15T22:38:15.0607455Z Get:173 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-dateutil all 2.7.3-3ubuntu1 [63.3 kB] 2021-05-15T22:38:15.0729600Z Get:174 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-decorator all 4.4.2-0ubuntu1 [10.3 kB] 2021-05-15T22:38:15.0808862Z Get:175 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-future all 0.18.2-2 [336 kB] 2021-05-15T22:38:15.1037514Z Get:176 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-webencodings all 0.5.1-1ubuntu1 [11.0 kB] 2021-05-15T22:38:15.1079048Z Get:177 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-html5lib all 1.0.1-2 [84.3 kB] 2021-05-15T22:38:15.1243080Z Get:178 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-ipython-genutils all 0.2.0-1ubuntu1 [21.1 kB] 2021-05-15T22:38:15.1320389Z Get:179 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-traitlets all 4.3.3-3 [59.9 kB] 2021-05-15T22:38:15.1409743Z Get:180 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-jupyter-core all 4.6.3-3 [41.2 kB] 2021-05-15T22:38:15.1448729Z Get:181 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-kiwisolver amd64 1.0.1-3build1 [61.3 kB] 2021-05-15T22:38:15.1471330Z Get:182 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-lxml amd64 4.5.0-1ubuntu0.3 [1382 kB] 2021-05-15T22:38:15.1884291Z Get:183 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-pyparsing all 2.4.6-1 [61.3 kB] 2021-05-15T22:38:15.1901231Z Get:184 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-matplotlib amd64 3.1.2-1ubuntu4 [4459 kB] 2021-05-15T22:38:15.3185061Z Get:185 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-nbformat all 5.0.4-1 [29.8 kB] 2021-05-15T22:38:15.3212813Z Get:186 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-olefile all 0.46-2 [33.7 kB] 2021-05-15T22:38:15.3598707Z Get:187 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyproj amd64 2.5.0+ds-1 [297 kB] 2021-05-15T22:38:15.3734947Z Get:188 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-tz all 2019.3-1 [24.4 kB] 2021-05-15T22:38:15.4120517Z Get:189 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-owslib all 0.19.1-1 [115 kB] 2021-05-15T22:38:15.4255592Z Get:190 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-pil amd64 7.0.0-4ubuntu0.3 [363 kB] 2021-05-15T22:38:15.4653881Z Get:191 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-retrying all 1.3.3-4 [8160 B] 2021-05-15T22:38:15.5018940Z Get:192 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-plotly all 4.4.1+dfsg-1 [1960 kB] 2021-05-15T22:38:15.5961901Z Get:193 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-psycopg2 amd64 2.8.4-2 [112 kB] 2021-05-15T22:38:15.6334706Z Get:194 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-sip amd64 4.19.21+dfsg-1build1 [87.9 kB] 2021-05-15T22:38:15.6357150Z Get:195 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5 amd64 5.14.1+dfsg-3build1 [2318 kB] 2021-05-15T22:38:15.9868006Z Get:196 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qsci amd64 2.11.2+dfsg-6 [230 kB] 2021-05-15T22:38:16.0967538Z Get:197 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsql amd64 5.14.1+dfsg-3build1 [87.5 kB] 2021-05-15T22:38:16.1056722Z Get:198 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsvg amd64 5.14.1+dfsg-3build1 [26.9 kB] 2021-05-15T22:38:16.1109096Z Get:199 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtwebkit amd64 5.14.1+dfsg-3build1 [103 kB] 2021-05-15T22:38:16.1596224Z Get:200 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis-common all 3.10.4+dfsg-1ubuntu2 [2390 kB] 2021-05-15T22:38:16.3489544Z Get:201 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis amd64 3.10.4+dfsg-1ubuntu2 [7772 kB] 2021-05-15T22:38:16.8158677Z Get:202 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-tk amd64 3.8.5-1~20.04.1 [103 kB] 2021-05-15T22:38:16.8570138Z Get:203 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-leaflet all 1.6.0~dfsg-1 [313 kB] 2021-05-15T22:38:16.9258114Z Get:204 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-common all 3.10.4+dfsg-1ubuntu2 [16.7 MB] 2021-05-15T22:38:17.8609769Z Get:205 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis amd64 3.10.4+dfsg-1ubuntu2 [4788 kB] 2021-05-15T22:38:18.7313808Z Get:206 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass-common all 3.10.4+dfsg-1ubuntu2 [463 kB] 2021-05-15T22:38:18.7903957Z Get:207 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-provider-grass amd64 3.10.4+dfsg-1ubuntu2 [92.3 kB] 2021-05-15T22:38:18.8345223Z Get:208 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass amd64 3.10.4+dfsg-1ubuntu2 [601 kB] 2021-05-15T22:38:18.8606495Z Get:209 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-gtk-platformtheme amd64 5.12.8+dfsg-0ubuntu1 [124 kB] 2021-05-15T22:38:18.8643864Z Get:210 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttranslations5-l10n all 5.12.8-0ubuntu1 [1486 kB] 2021-05-15T22:38:18.8949381Z Get:211 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 wpasupplicant amd64 2:2.9-1ubuntu4.3 [1183 kB] 2021-05-15T22:38:18.9389478Z Get:212 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-bin amd64 6.3.1-1 [88.8 kB] 2021-05-15T22:38:18.9484674Z Get:213 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch-data all 20191128-3 [32.3 kB] 2021-05-15T22:38:18.9555917Z Get:214 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch amd64 2.5.2+repack0-2ubuntu3 [53.1 kB] 2021-05-15T22:38:20.0463714Z Fetched 183 MB in 12s (15.8 MB/s) 2021-05-15T22:38:20.0810694Z Selecting previously unselected package libdouble-conversion3:amd64. 2021-05-15T22:38:20.0887722Z (Reading database ... 2021-05-15T22:38:20.0888638Z (Reading database ... 5% 2021-05-15T22:38:20.0889617Z (Reading database ... 10% 2021-05-15T22:38:20.0890219Z (Reading database ... 15% 2021-05-15T22:38:20.0890734Z (Reading database ... 20% 2021-05-15T22:38:20.0891317Z (Reading database ... 25% 2021-05-15T22:38:20.0891828Z (Reading database ... 30% 2021-05-15T22:38:20.0892333Z (Reading database ... 35% 2021-05-15T22:38:20.0892839Z (Reading database ... 40% 2021-05-15T22:38:20.0893332Z (Reading database ... 45% 2021-05-15T22:38:20.0893839Z (Reading database ... 50% 2021-05-15T22:38:20.0939548Z (Reading database ... 55% 2021-05-15T22:38:20.0982243Z (Reading database ... 60% 2021-05-15T22:38:20.1008855Z (Reading database ... 65% 2021-05-15T22:38:20.1132455Z (Reading database ... 70% 2021-05-15T22:38:20.1249265Z (Reading database ... 75% 2021-05-15T22:38:20.1271427Z (Reading database ... 80% 2021-05-15T22:38:20.1635631Z (Reading database ... 85% 2021-05-15T22:38:20.1946754Z (Reading database ... 90% 2021-05-15T22:38:20.2018331Z (Reading database ... 95% 2021-05-15T22:38:20.2019165Z (Reading database ... 100% 2021-05-15T22:38:20.2020062Z (Reading database ... 269928 files and directories currently installed.) 2021-05-15T22:38:20.2122760Z Preparing to unpack .../000-libdouble-conversion3_3.1.5-4ubuntu1_amd64.deb ... 2021-05-15T22:38:20.2147482Z Unpacking libdouble-conversion3:amd64 (3.1.5-4ubuntu1) ... 2021-05-15T22:38:20.2507721Z Selecting previously unselected package libqt5core5a:amd64. 2021-05-15T22:38:20.2722702Z Preparing to unpack .../001-libqt5core5a_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-05-15T22:38:20.2808072Z Unpacking libqt5core5a:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:38:20.4668055Z Selecting previously unselected package libegl-mesa0:amd64. 2021-05-15T22:38:20.4901330Z Preparing to unpack .../002-libegl-mesa0_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-15T22:38:20.4911963Z Unpacking libegl-mesa0:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-15T22:38:20.5347058Z Selecting previously unselected package libegl1:amd64. 2021-05-15T22:38:20.5528462Z Preparing to unpack .../003-libegl1_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-15T22:38:20.5542842Z Unpacking libegl1:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-15T22:38:20.5867280Z Selecting previously unselected package libevdev2:amd64. 2021-05-15T22:38:20.6099285Z Preparing to unpack .../004-libevdev2_1.9.0+dfsg-1ubuntu0.1_amd64.deb ... 2021-05-15T22:38:20.6110515Z Unpacking libevdev2:amd64 (1.9.0+dfsg-1ubuntu0.1) ... 2021-05-15T22:38:20.6427040Z Selecting previously unselected package libmtdev1:amd64. 2021-05-15T22:38:20.6662656Z Preparing to unpack .../005-libmtdev1_1.1.5-1.1_amd64.deb ... 2021-05-15T22:38:20.6673912Z Unpacking libmtdev1:amd64 (1.1.5-1.1) ... 2021-05-15T22:38:20.6948077Z Selecting previously unselected package libwacom-common. 2021-05-15T22:38:20.7227902Z Preparing to unpack .../006-libwacom-common_1.3-2ubuntu3_all.deb ... 2021-05-15T22:38:20.7239520Z Unpacking libwacom-common (1.3-2ubuntu3) ... 2021-05-15T22:38:20.7987465Z Selecting previously unselected package libwacom2:amd64. 2021-05-15T22:38:20.8229355Z Preparing to unpack .../007-libwacom2_1.3-2ubuntu3_amd64.deb ... 2021-05-15T22:38:20.8241554Z Unpacking libwacom2:amd64 (1.3-2ubuntu3) ... 2021-05-15T22:38:20.8481185Z Selecting previously unselected package libinput-bin. 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2021-05-15T22:38:55.4425357Z Setting up geoclue-2.0 (2.5.6-0ubuntu1) ... 2021-05-15T22:38:55.8085229Z geoclue.service is a disabled or a static unit, not starting it. 2021-05-15T22:38:55.8108229Z Setting up libqt5serialport5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T22:38:55.8144770Z Setting up python3-nbformat (5.0.4-1) ... 2021-05-15T22:38:55.9754286Z Setting up libmbim-proxy (1.22.0-2) ... 2021-05-15T22:38:55.9802292Z Setting up python3-pyproj (2.5.0+ds-1) ... 2021-05-15T22:38:56.1365616Z Setting up libqt5network5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:38:56.1403448Z Setting up python3-bs4 (4.8.2-1) ... 2021-05-15T22:38:56.3208522Z Setting up libgeotiff5:amd64 (1.5.1-2) ... 2021-05-15T22:38:56.3242658Z Setting up gcr (3.36.0-2build1) ... 2021-05-15T22:38:56.3287085Z Setting up libqt5sql5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:38:56.3315697Z Setting up wpasupplicant (2:2.9-1ubuntu4.3) ... 2021-05-15T22:38:56.5005390Z Created symlink /etc/systemd/system/dbus-fi.w1.wpa_supplicant1.service → /lib/systemd/system/wpa_supplicant.service. 2021-05-15T22:38:56.5011271Z Created symlink /etc/systemd/system/multi-user.target.wants/wpa_supplicant.service → /lib/systemd/system/wpa_supplicant.service. 2021-05-15T22:38:57.0012859Z Setting up python3-pil:amd64 (7.0.0-4ubuntu0.3) ... 2021-05-15T22:38:57.2943620Z Setting up libqt5xml5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:38:57.2974641Z Setting up gstreamer1.0-plugins-base:amd64 (1.16.2-4) ... 2021-05-15T22:38:57.3003008Z Setting up libqt5qml5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T22:38:57.3040514Z Setting up qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:38:57.3076049Z Setting up qtattributionsscanner-qt5 (5.12.8-0ubuntu1) ... 2021-05-15T22:38:57.3109711Z Setting up libqt5webchannel5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T22:38:57.3151762Z Setting up python3-plotly (4.4.1+dfsg-1) ... 2021-05-15T22:38:57.4646511Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T22:38:57.4648981Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-05-15T22:38:57.4651638Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T22:38:57.4653704Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-05-15T22:38:57.5066396Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:194: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T22:38:57.5069201Z if direction is "increasing": 2021-05-15T22:38:57.5072604Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:199: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T22:38:57.5074985Z elif direction is "decreasing": 2021-05-15T22:38:57.5257340Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:176: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T22:38:57.5258566Z if direction is "increasing": 2021-05-15T22:38:57.5259953Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:179: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T22:38:57.5260976Z elif direction is "decreasing": 2021-05-15T22:38:58.4510557Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:460: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T22:38:58.4513381Z if props["offset_coordinates"] is "data": 2021-05-15T22:38:58.4516638Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:572: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-05-15T22:38:58.4520476Z if props["coordinates"] is not "data": 2021-05-15T22:38:59.1529292Z Setting up avahi-daemon (0.7-4ubuntu7) ... 2021-05-15T22:38:59.7077463Z Created symlink /etc/systemd/system/dbus-org.freedesktop.Avahi.service → /lib/systemd/system/avahi-daemon.service. 2021-05-15T22:38:59.7082537Z Created symlink /etc/systemd/system/multi-user.target.wants/avahi-daemon.service → /lib/systemd/system/avahi-daemon.service. 2021-05-15T22:38:59.7087090Z Created symlink /etc/systemd/system/sockets.target.wants/avahi-daemon.socket → /lib/systemd/system/avahi-daemon.socket. 2021-05-15T22:39:00.8121530Z Setting up libnss-mdns:amd64 (0.14.1-1ubuntu1) ... 2021-05-15T22:39:00.8166805Z First installation detected... 2021-05-15T22:39:00.8167858Z Checking NSS setup... 2021-05-15T22:39:00.8205278Z Setting up libwacom2:amd64 (1.3-2ubuntu3) ... 2021-05-15T22:39:00.8234647Z Setting up libqt5sql5-sqlite:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:00.8271569Z Setting up python3-owslib (0.19.1-1) ... 2021-05-15T22:39:01.0905658Z Setting up libgdal26 (3.0.4+dfsg-1build3) ... 2021-05-15T22:39:01.0968620Z Setting up libqmi-glib5:amd64 (1.24.8-1) ... 2021-05-15T22:39:01.1000826Z Setting up libpdal-base9 (2.0.1+ds-1build3) ... 2021-05-15T22:39:01.1061125Z Setting up libinput-bin (1.15.5-1ubuntu0.2) ... 2021-05-15T22:39:01.1103973Z Setting up libwacom-bin (1.3-2ubuntu3) ... 2021-05-15T22:39:01.1159113Z Setting up libpdal-plugin-pgpointcloud (2.0.1+ds-1build3) ... 2021-05-15T22:39:01.1206109Z Setting up libpdal-plugin-icebridge (2.0.1+ds-1build3) ... 2021-05-15T22:39:01.1244613Z Setting up libpdal-plugin-python (2.0.1+ds-1build3) ... 2021-05-15T22:39:01.1291739Z Setting up python3-gdal (3.0.4+dfsg-1build3) ... 2021-05-15T22:39:01.3149950Z Setting up libinput10:amd64 (1.15.5-1ubuntu0.2) ... 2021-05-15T22:39:01.3207376Z Setting up libpdal-plugin-faux (2.0.1+ds-1build3) ... 2021-05-15T22:39:01.3234049Z Setting up grass-core (7.8.2-1build3) ... 2021-05-15T22:39:01.6736165Z /usr/lib/grass78/etc/python/grass/pygrass/gis/__init__.py:75: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T22:39:01.6739297Z if value is '': 2021-05-15T22:39:01.7745652Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T22:39:01.7748045Z if do_profiling is "True" or do_profiling is "1": 2021-05-15T22:39:01.7750075Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T22:39:01.7751848Z if do_profiling is "True" or do_profiling is "1": 2021-05-15T22:39:01.7755999Z /usr/lib/grass78/etc/python/grass/temporal/core.py:582: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-05-15T22:39:01.7757858Z if driver_string is not None and driver_string is not "": 2021-05-15T22:39:01.8178390Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T22:39:01.8180501Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-05-15T22:39:01.8182752Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T22:39:01.8184783Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-05-15T22:39:01.8863656Z Setting up libpdal-plugin-sqlite (2.0.1+ds-1build3) ... 2021-05-15T22:39:01.8890773Z Setting up libqt5gui5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:01.8978823Z Setting up libqmi-proxy (1.24.8-1) ... 2021-05-15T22:39:01.9004853Z Setting up libqt5widgets5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:01.9042908Z Setting up libqt53dcore5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:01.9221076Z Setting up libqt5help5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T22:39:01.9253980Z Setting up libqt53dlogic5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:01.9287756Z Setting up qt5-gtk-platformtheme:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:01.9317820Z Setting up libqgis-native3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:39:01.9350882Z Setting up libqt5printsupport5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:01.9382720Z Setting up gdal-bin (3.0.4+dfsg-1build3) ... 2021-05-15T22:39:02.0290965Z Setting up qt5-image-formats-plugins:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T22:39:02.0318301Z Setting up libqt53dinput5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:02.0346020Z Setting up libqt5opengl5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:02.0386750Z Setting up modemmanager (1.12.8-1) ... 2021-05-15T22:39:02.1848217Z Created symlink /etc/systemd/system/dbus-org.freedesktop.ModemManager1.service → /lib/systemd/system/ModemManager.service. 2021-05-15T22:39:02.1853067Z Created symlink /etc/systemd/system/multi-user.target.wants/ModemManager.service → /lib/systemd/system/ModemManager.service. 2021-05-15T22:39:02.6843484Z Setting up libqt5quick5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T22:39:02.6887586Z Setting up libqt5designer5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T22:39:02.6929625Z Setting up libpdal-plugins (2.0.1+ds-1build3) ... 2021-05-15T22:39:02.6955340Z Setting up libqt5svg5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T22:39:02.6988741Z Setting up libqt53drender5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:02.7019762Z Setting up qhelpgenerator-qt5 (5.12.8-0ubuntu1) ... 2021-05-15T22:39:02.7057236Z Setting up libqwt-qt5-6 (6.1.4-1.1build1) ... 2021-05-15T22:39:02.7084599Z Setting up libqscintilla2-qt5-15 (2.11.2+dfsg-6) ... 2021-05-15T22:39:02.7120690Z Setting up libqt5webkit5:amd64 (5.212.0~alpha4-1ubuntu2) ... 2021-05-15T22:39:02.7170506Z Setting up libqt5designercomponents5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T22:39:02.7195550Z Setting up libqt5quickwidgets5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T22:39:02.7221342Z Setting up libqgis-core3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:39:02.7254257Z Setting up libqt53dquickscene2d5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:02.7285397Z Setting up libqgis-gui3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:39:02.7314171Z Setting up libqgis-analysis3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:39:02.7339583Z Setting up qt5-assistant (5.12.8-0ubuntu1) ... 2021-05-15T22:39:02.7369352Z Setting up qttools5-dev-tools (5.12.8-0ubuntu1) ... 2021-05-15T22:39:02.7394920Z Setting up libqgispython3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:39:02.7420509Z Setting up qt3d-scene2d-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:02.7450478Z Setting up python3-pyqt5 (5.14.1+dfsg-3build1) ... 2021-05-15T22:39:02.8945486Z Setting up python3-pyqt5.qtsvg (5.14.1+dfsg-3build1) ... 2021-05-15T22:39:02.9012725Z Setting up libqt53danimation5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:02.9042849Z Setting up qt3d-defaultgeometryloader-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:02.9072213Z Setting up qgis-providers (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:39:33.7340847Z Setting up libqt53dextras5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:33.7390921Z Setting up python3-pyqt5.qtsql (5.14.1+dfsg-3build1) ... 2021-05-15T22:39:33.7436502Z Setting up libqgis-customwidgets (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:39:33.7467738Z Setting up qt3d-gltfsceneio-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:33.7494362Z Setting up libqgis-server3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:39:33.7535262Z Setting up libqgisgrass7-3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:39:33.7566816Z Setting up qt3d-assimpsceneimport-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T22:39:33.7595812Z Setting up python3-qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:39:33.9036314Z Setting up libqgis-3d3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:39:33.9064714Z Setting up python3-pyqt5.qtwebkit (5.14.1+dfsg-3build1) ... 2021-05-15T22:39:33.9092846Z Setting up qgis-provider-grass (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:39:33.9127856Z Setting up python3-pyqt5.qsci (2.11.2+dfsg-6) ... 2021-05-15T22:39:33.9161974Z Setting up python3-qgis (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:39:34.0708861Z Setting up libqgis-app3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:39:34.0747759Z Setting up qgis (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:39:34.0787541Z Setting up qgis-plugin-grass (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T22:39:34.0953060Z Processing triggers for dbus (1.12.16-2ubuntu2.1) ... 2021-05-15T22:39:34.1158363Z Processing triggers for shared-mime-info (1.15-1) ... 2021-05-15T22:39:35.1429971Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-15T22:39:35.1606604Z Processing triggers for mime-support (3.64ubuntu1) ... 2021-05-15T22:39:35.1833533Z Processing triggers for hicolor-icon-theme (0.17-2) ... 2021-05-15T22:39:35.1977435Z Processing triggers for libglib2.0-0:amd64 (2.64.6-1~ubuntu20.04.3) ... 2021-05-15T22:39:35.2828175Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:39:35.3125434Z Processing triggers for systemd (245.4-4ubuntu3.6) ... 2021-05-15T22:39:35.6640559Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:39:46.8022657Z Setting up pinentry-gnome3 (1.1.0-3build1) ... 2021-05-15T22:39:46.8209184Z Setting up gnome-keyring (3.36.0-1ubuntu1) ... 2021-05-15T22:39:48.9320331Z ##[group]Run adigherman/actions/get-repo-name@master 2021-05-15T22:39:48.9320934Z with: 2021-05-15T22:39:48.9321466Z github_slug: neuroconductor/sri24 2021-05-15T22:39:48.9321947Z env: 2021-05-15T22:39:48.9322437Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:39:48.9322944Z TIC_DEPLOY_KEY: 2021-05-15T22:39:48.9323858Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:39:48.9325783Z GITHUB_PAT: *** 2021-05-15T22:39:48.9326192Z COVERALLS_TOKEN: 2021-05-15T22:39:48.9326696Z continue-on-error: true 2021-05-15T22:39:48.9327178Z VDIFFR_RUN_TESTS: 2021-05-15T22:39:48.9327682Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:39:48.9328148Z TZ: UTC 2021-05-15T22:39:48.9328551Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:39:48.9328965Z NOT_CRAN: true 2021-05-15T22:39:48.9329353Z ##[endgroup] 2021-05-15T22:39:48.9687390Z repo slug is: neuroconductor/sri24 2021-05-15T22:39:48.9780638Z ##[group]Run adigherman/actions/get-repo-version@master 2021-05-15T22:39:48.9781221Z env: 2021-05-15T22:39:48.9781682Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:39:48.9782155Z TIC_DEPLOY_KEY: 2021-05-15T22:39:48.9783096Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:39:48.9784279Z GITHUB_PAT: *** 2021-05-15T22:39:48.9784634Z COVERALLS_TOKEN: 2021-05-15T22:39:48.9785075Z continue-on-error: true 2021-05-15T22:39:48.9785493Z VDIFFR_RUN_TESTS: 2021-05-15T22:39:48.9785937Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:39:48.9786446Z TZ: UTC 2021-05-15T22:39:48.9786804Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:39:48.9787167Z NOT_CRAN: true 2021-05-15T22:39:48.9787630Z ##[endgroup] 2021-05-15T22:39:49.1728532Z ##[group]Run adigherman/actions/get-release-asset@master 2021-05-15T22:39:49.1729149Z with: 2021-05-15T22:39:49.1729518Z repo_name: sri24 2021-05-15T22:39:49.1729935Z repo_version: 0.1.2 2021-05-15T22:39:49.1730341Z runner_os: Linux 2021-05-15T22:39:49.1730737Z R_version: 4.1 2021-05-15T22:39:49.1731089Z env: 2021-05-15T22:39:49.1731550Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:39:49.1732040Z TIC_DEPLOY_KEY: 2021-05-15T22:39:49.1732882Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:39:49.1736093Z GITHUB_PAT: *** 2021-05-15T22:39:49.1736545Z COVERALLS_TOKEN: 2021-05-15T22:39:49.1737091Z continue-on-error: true 2021-05-15T22:39:49.1737615Z VDIFFR_RUN_TESTS: 2021-05-15T22:39:49.1738167Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:39:49.1738655Z TZ: UTC 2021-05-15T22:39:49.1739098Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:39:49.1739573Z NOT_CRAN: true 2021-05-15T22:39:49.1740009Z ##[endgroup] 2021-05-15T22:39:49.2093634Z Package: sri24 2021-05-15T22:39:49.2097957Z Version: 0.1.2 2021-05-15T22:39:49.2099008Z OS: Linux 2021-05-15T22:39:49.2185244Z ##[group]Run install.packages('remotes') 2021-05-15T22:39:49.2185943Z install.packages('remotes') 2021-05-15T22:39:49.2186962Z saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) 2021-05-15T22:39:49.2188009Z writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") 2021-05-15T22:39:49.2194937Z shell: /usr/local/bin/Rscript {0} 2021-05-15T22:39:49.2195352Z env: 2021-05-15T22:39:49.2195817Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:39:49.2196302Z TIC_DEPLOY_KEY: 2021-05-15T22:39:49.2197152Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:39:49.2198492Z GITHUB_PAT: *** 2021-05-15T22:39:49.2198912Z COVERALLS_TOKEN: 2021-05-15T22:39:49.2199432Z continue-on-error: true 2021-05-15T22:39:49.2199914Z VDIFFR_RUN_TESTS: 2021-05-15T22:39:49.2200418Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:39:49.2200949Z TZ: UTC 2021-05-15T22:39:49.2201299Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:39:49.2201679Z NOT_CRAN: true 2021-05-15T22:39:49.2202016Z ##[endgroup] 2021-05-15T22:39:49.3861756Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-15T22:39:49.3862769Z (as ‘lib’ is unspecified) 2021-05-15T22:40:03.7695168Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/remotes_2.3.0.tar.gz' 2021-05-15T22:40:04.3126916Z Content type 'binary/octet-stream' length 148709 bytes (145 KB) 2021-05-15T22:40:04.3233545Z ================================================== 2021-05-15T22:40:04.3234882Z downloaded 145 KB 2021-05-15T22:40:04.3235676Z 2021-05-15T22:40:04.6057236Z * installing *source* package ‘remotes’ ... 2021-05-15T22:40:04.6100244Z ** package ‘remotes’ successfully unpacked and MD5 sums checked 2021-05-15T22:40:04.6103282Z ** using staged installation 2021-05-15T22:40:04.6250350Z ** R 2021-05-15T22:40:04.6428521Z ** inst 2021-05-15T22:40:04.6437782Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:40:06.3090379Z ** help 2021-05-15T22:40:06.3921346Z *** installing help indices 2021-05-15T22:40:06.4553085Z ** building package indices 2021-05-15T22:40:06.7184771Z ** installing vignettes 2021-05-15T22:40:06.7262885Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:40:06.9288328Z ** testing if installed package can be loaded from final location 2021-05-15T22:40:07.1691923Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:40:07.1693277Z * DONE (remotes) 2021-05-15T22:40:07.1736951Z 2021-05-15T22:40:07.1737995Z The downloaded source packages are in 2021-05-15T22:40:07.1739498Z ‘/tmp/RtmphE7UL8/downloaded_packages’ 2021-05-15T22:40:23.6950642Z ##[group]Run actions/cache@v1 2021-05-15T22:40:23.6951182Z with: 2021-05-15T22:40:23.6951588Z path: /home/runner/work/_temp/Library 2021-05-15T22:40:23.6954419Z key: Linux-e3adb7ee20b68d8bd651f6f30d4cc1690a70853cf8f0c4dcbc5c14b00f693a6a-1-9b03c027dec79b553a6ae08c0a6746f11c51b2a7220ed4b21e8f72c333ec0457 2021-05-15T22:40:23.6957964Z restore-keys: Linux-e3adb7ee20b68d8bd651f6f30d4cc1690a70853cf8f0c4dcbc5c14b00f693a6a-1- 2021-05-15T22:40:23.6958970Z env: 2021-05-15T22:40:23.6959317Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:40:23.6959672Z TIC_DEPLOY_KEY: 2021-05-15T22:40:23.6960324Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:40:23.6961850Z GITHUB_PAT: *** 2021-05-15T22:40:23.6962166Z COVERALLS_TOKEN: 2021-05-15T22:40:23.6962554Z continue-on-error: true 2021-05-15T22:40:23.6962917Z VDIFFR_RUN_TESTS: 2021-05-15T22:40:23.6963309Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:40:23.6963700Z TZ: UTC 2021-05-15T22:40:23.6964002Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:40:23.6964338Z NOT_CRAN: true 2021-05-15T22:40:23.6964625Z ##[endgroup] 2021-05-15T22:40:23.7374865Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-05-15T22:40:23.7429384Z ##[group]Run Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-05-15T22:40:23.7430229Z Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-05-15T22:40:23.7431077Z sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") 2021-05-15T22:40:23.7431658Z sudo -s eval "$sysreqs" 2021-05-15T22:40:23.7470360Z shell: /usr/bin/bash -e {0} 2021-05-15T22:40:23.7470727Z env: 2021-05-15T22:40:23.7471134Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:40:23.7471555Z TIC_DEPLOY_KEY: 2021-05-15T22:40:23.7472297Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:40:23.7473509Z GITHUB_PAT: *** 2021-05-15T22:40:23.7473881Z COVERALLS_TOKEN: 2021-05-15T22:40:23.7474320Z continue-on-error: true 2021-05-15T22:40:23.7474762Z VDIFFR_RUN_TESTS: 2021-05-15T22:40:23.7475377Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:40:23.7475842Z TZ: UTC 2021-05-15T22:40:23.7476260Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:40:23.7476689Z NOT_CRAN: true 2021-05-15T22:40:23.7477175Z RHUB_PLATFORM: linux-x86_64-ubuntu-gcc 2021-05-15T22:40:23.7477677Z ##[endgroup] 2021-05-15T22:40:23.9282122Z Using github PAT from envvar GITHUB_PAT 2021-05-15T22:40:24.4107765Z Downloading GitHub repo r-hub/sysreqs@HEAD 2021-05-15T22:40:40.0229420Z rprojroot (NA -> 2.0.2) [CRAN] 2021-05-15T22:40:40.0230749Z crayon (NA -> 1.4.1) [CRAN] 2021-05-15T22:40:40.0231911Z R6 (NA -> 2.5.0) [CRAN] 2021-05-15T22:40:40.0233041Z desc (NA -> 1.3.0) [CRAN] 2021-05-15T22:40:40.0234229Z debugme (NA -> 1.1.0) [CRAN] 2021-05-15T22:40:40.0254840Z Installing 5 packages: rprojroot, crayon, R6, desc, debugme 2021-05-15T22:40:40.0269965Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-15T22:40:40.0271092Z (as ‘lib’ is unspecified) 2021-05-15T22:40:54.0501152Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rprojroot_2.0.2.tar.gz' 2021-05-15T22:40:55.9802684Z Content type 'binary/octet-stream' length 61445 bytes (60 KB) 2021-05-15T22:40:55.9855663Z ================================================== 2021-05-15T22:40:55.9856401Z downloaded 60 KB 2021-05-15T22:40:55.9856713Z 2021-05-15T22:40:55.9894445Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/crayon_1.4.1.tar.gz' 2021-05-15T22:40:56.3796358Z Content type 'binary/octet-stream' length 35834 bytes (34 KB) 2021-05-15T22:40:56.3797745Z ================================================== 2021-05-15T22:40:56.3798602Z downloaded 34 KB 2021-05-15T22:40:56.3799162Z 2021-05-15T22:40:56.3851847Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R6_2.5.0.tar.gz' 2021-05-15T22:40:59.9875052Z Content type 'binary/octet-stream' length 64110 bytes (62 KB) 2021-05-15T22:40:59.9927248Z ================================================== 2021-05-15T22:40:59.9928581Z downloaded 62 KB 2021-05-15T22:40:59.9929492Z 2021-05-15T22:40:59.9979310Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/desc_1.3.0.tar.gz' 2021-05-15T22:41:00.3938314Z Content type 'binary/octet-stream' length 292756 bytes (285 KB) 2021-05-15T22:41:00.4103831Z ================================================== 2021-05-15T22:41:00.4104744Z downloaded 285 KB 2021-05-15T22:41:00.4105371Z 2021-05-15T22:41:00.4144464Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/debugme_1.1.0.tar.gz' 2021-05-15T22:41:00.8183359Z Content type 'application/x-tar' length 997019 bytes (973 KB) 2021-05-15T22:41:00.8655818Z ================================================== 2021-05-15T22:41:00.8656507Z downloaded 973 KB 2021-05-15T22:41:00.8658831Z 2021-05-15T22:41:01.1631127Z * installing *source* package ‘rprojroot’ ... 2021-05-15T22:41:01.1657507Z ** package ‘rprojroot’ successfully unpacked and MD5 sums checked 2021-05-15T22:41:01.1658713Z ** using staged installation 2021-05-15T22:41:01.1811737Z ** R 2021-05-15T22:41:01.1862488Z ** inst 2021-05-15T22:41:01.1873647Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:41:01.6719073Z ** help 2021-05-15T22:41:01.7006085Z *** installing help indices 2021-05-15T22:41:01.7303985Z *** copying figures 2021-05-15T22:41:01.7309300Z ** building package indices 2021-05-15T22:41:01.9403736Z ** installing vignettes 2021-05-15T22:41:01.9459454Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:41:02.1244631Z ** testing if installed package can be loaded from final location 2021-05-15T22:41:02.3054608Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:41:02.3062954Z * DONE (rprojroot) 2021-05-15T22:41:02.5562734Z * installing *source* package ‘crayon’ ... 2021-05-15T22:41:02.5584035Z ** package ‘crayon’ successfully unpacked and MD5 sums checked 2021-05-15T22:41:02.5585169Z ** using staged installation 2021-05-15T22:41:02.5709986Z ** R 2021-05-15T22:41:02.5796695Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:41:03.4322502Z ** help 2021-05-15T22:41:03.4888353Z *** installing help indices 2021-05-15T22:41:03.5276281Z ** building package indices 2021-05-15T22:41:03.7707634Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:41:03.9513006Z ** testing if installed package can be loaded from final location 2021-05-15T22:41:04.1502849Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:41:04.1513748Z * DONE (crayon) 2021-05-15T22:41:04.3916049Z * installing *source* package ‘R6’ ... 2021-05-15T22:41:04.3933710Z ** package ‘R6’ successfully unpacked and MD5 sums checked 2021-05-15T22:41:04.3934354Z ** using staged installation 2021-05-15T22:41:04.4053698Z ** R 2021-05-15T22:41:04.4116241Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:41:04.8660706Z ** help 2021-05-15T22:41:04.8860119Z *** installing help indices 2021-05-15T22:41:04.9051706Z *** copying figures 2021-05-15T22:41:04.9055338Z ** building package indices 2021-05-15T22:41:05.0923086Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:41:05.2730236Z ** testing if installed package can be loaded from final location 2021-05-15T22:41:05.4473523Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:41:05.4479511Z * DONE (R6) 2021-05-15T22:41:05.7363891Z * installing *source* package ‘desc’ ... 2021-05-15T22:41:05.7416043Z ** package ‘desc’ successfully unpacked and MD5 sums checked 2021-05-15T22:41:05.7417301Z ** using staged installation 2021-05-15T22:41:05.7565595Z ** R 2021-05-15T22:41:05.7683069Z ** inst 2021-05-15T22:41:05.7697225Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:41:07.1025156Z ** help 2021-05-15T22:41:07.2243953Z *** installing help indices 2021-05-15T22:41:07.3034978Z ** building package indices 2021-05-15T22:41:07.5556714Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:41:07.7648269Z ** testing if installed package can be loaded from final location 2021-05-15T22:41:08.7307738Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:41:08.7320506Z * DONE (desc) 2021-05-15T22:41:08.7322972Z * installing *source* package ‘debugme’ ... 2021-05-15T22:41:08.7325153Z ** package ‘debugme’ successfully unpacked and MD5 sums checked 2021-05-15T22:41:08.7326741Z ** using staged installation 2021-05-15T22:41:08.7327751Z ** R 2021-05-15T22:41:08.7328549Z ** inst 2021-05-15T22:41:08.7330241Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:41:08.7331489Z ** help 2021-05-15T22:41:08.7332547Z *** installing help indices 2021-05-15T22:41:08.7333772Z ** building package indices 2021-05-15T22:41:08.8829284Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:41:09.0757473Z ** testing if installed package can be loaded from final location 2021-05-15T22:41:09.2642554Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:41:09.2650513Z * DONE (debugme) 2021-05-15T22:41:09.2708286Z 2021-05-15T22:41:09.2709406Z The downloaded source packages are in 2021-05-15T22:41:09.2710925Z ‘/tmp/RtmpaArAv5/downloaded_packages’ 2021-05-15T22:41:09.2720799Z Running `R CMD build`... 2021-05-15T22:41:09.5492307Z * checking for file ‘/tmp/RtmpaArAv5/remotes69a31a14c383/r-hub-sysreqs-f068afa/DESCRIPTION’ ... OK 2021-05-15T22:41:09.5493846Z * preparing ‘sysreqs’: 2021-05-15T22:41:09.5494852Z * checking DESCRIPTION meta-information ... OK 2021-05-15T22:41:09.5496136Z * checking for LF line-endings in source and make files and shell scripts 2021-05-15T22:41:09.5497100Z * checking for empty or unneeded directories 2021-05-15T22:41:09.5498041Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-15T22:41:09.5498988Z * building ‘sysreqs_1.0.0.9000.tar.gz’ 2021-05-15T22:41:09.5500099Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-15T22:41:09.5500986Z (as ‘lib’ is unspecified) 2021-05-15T22:41:09.7524940Z * installing *source* package ‘sysreqs’ ... 2021-05-15T22:41:09.7527180Z ** using staged installation 2021-05-15T22:41:09.7646153Z ** R 2021-05-15T22:41:09.7681107Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:41:10.0837614Z ** help 2021-05-15T22:41:10.1033127Z *** installing help indices 2021-05-15T22:41:10.1190632Z ** building package indices 2021-05-15T22:41:10.2917641Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:41:10.4708871Z ** testing if installed package can be loaded from final location 2021-05-15T22:41:10.6541382Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:41:10.6551877Z * DONE (sysreqs) 2021-05-15T22:41:26.9999091Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-05-15T22:41:27.0001840Z Hit:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease 2021-05-15T22:41:27.0003662Z Hit:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease 2021-05-15T22:41:27.0209593Z Hit:4 https://download.mono-project.com/repo/ubuntu stable-focal InRelease 2021-05-15T22:41:27.7369497Z Hit:5 http://security.ubuntu.com/ubuntu focal-security InRelease 2021-05-15T22:41:27.7373389Z Hit:6 http://ppa.launchpad.net/apt-fast/stable/ubuntu focal InRelease 2021-05-15T22:41:27.7374749Z Hit:7 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease 2021-05-15T22:41:27.7376020Z Hit:8 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease 2021-05-15T22:41:27.7377539Z Hit:9 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-05-15T22:41:28.7989158Z Reading package lists... 2021-05-15T22:41:28.8771778Z Reading package lists... 2021-05-15T22:41:29.0268270Z Building dependency tree... 2021-05-15T22:41:29.0289901Z Reading state information... 2021-05-15T22:41:29.1818153Z libicu-dev is already the newest version (66.1-2ubuntu2). 2021-05-15T22:41:29.1820689Z libicu-dev set to manually installed. 2021-05-15T22:41:29.1822942Z libssl-dev is already the newest version (1.1.1f-1ubuntu2.3). 2021-05-15T22:41:29.1825043Z pandoc is already the newest version (2.7.3-1). 2021-05-15T22:41:29.1827295Z The following additional packages will be installed: 2021-05-15T22:41:29.1829788Z libbibutils6 libghc-pandoc-citeproc-data 2021-05-15T22:41:29.1831464Z Suggested packages: 2021-05-15T22:41:29.1834439Z libcurl4-doc libidn11-dev libldap2-dev librtmp-dev 2021-05-15T22:41:29.2269603Z The following NEW packages will be installed: 2021-05-15T22:41:29.7368060Z libbibutils6 libcurl4-openssl-dev libghc-pandoc-citeproc-data 2021-05-15T22:41:29.7378215Z pandoc-citeproc 2021-05-15T22:41:29.7380021Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T22:41:29.7381025Z Need to get 13.7 MB of archives. 2021-05-15T22:41:29.7381965Z After this operation, 109 MB of additional disk space will be used. 2021-05-15T22:41:29.7384120Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbibutils6 amd64 6.2-1 [365 kB] 2021-05-15T22:41:29.7387333Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcurl4-openssl-dev amd64 7.68.0-1ubuntu2.5 [321 kB] 2021-05-15T22:41:29.7390468Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libghc-pandoc-citeproc-data all 0.15.0.1-1build4 [51.1 kB] 2021-05-15T22:41:29.7392985Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 pandoc-citeproc amd64 0.15.0.1-1build4 [12.9 MB] 2021-05-15T22:41:30.2412746Z Fetched 13.7 MB in 1s (25.5 MB/s) 2021-05-15T22:41:30.2804816Z Selecting previously unselected package libbibutils6. 2021-05-15T22:41:30.2901311Z (Reading database ... 2021-05-15T22:41:30.2902074Z (Reading database ... 5% 2021-05-15T22:41:30.2902754Z (Reading database ... 10% 2021-05-15T22:41:30.2903390Z (Reading database ... 15% 2021-05-15T22:41:30.2904066Z (Reading database ... 20% 2021-05-15T22:41:30.2904717Z (Reading database ... 25% 2021-05-15T22:41:30.2905343Z (Reading database ... 30% 2021-05-15T22:41:30.2905990Z (Reading database ... 35% 2021-05-15T22:41:30.2906907Z (Reading database ... 40% 2021-05-15T22:41:30.2907579Z (Reading database ... 45% 2021-05-15T22:41:30.2909175Z (Reading database ... 50% 2021-05-15T22:41:30.2961953Z (Reading database ... 55% 2021-05-15T22:41:30.3021792Z (Reading database ... 60% 2021-05-15T22:41:30.3077444Z (Reading database ... 65% 2021-05-15T22:41:30.3315329Z (Reading database ... 70% 2021-05-15T22:41:30.3362137Z (Reading database ... 75% 2021-05-15T22:41:30.3732773Z (Reading database ... 80% 2021-05-15T22:41:30.3862748Z (Reading database ... 85% 2021-05-15T22:41:30.4345539Z (Reading database ... 90% 2021-05-15T22:41:30.4438675Z (Reading database ... 95% 2021-05-15T22:41:30.4440013Z (Reading database ... 100% 2021-05-15T22:41:30.4441724Z (Reading database ... 285139 files and directories currently installed.) 2021-05-15T22:41:30.4582816Z Preparing to unpack .../libbibutils6_6.2-1_amd64.deb ... 2021-05-15T22:41:30.4603854Z Unpacking libbibutils6 (6.2-1) ... 2021-05-15T22:41:30.5388260Z Selecting previously unselected package libcurl4-openssl-dev:amd64. 2021-05-15T22:41:30.5677518Z Preparing to unpack .../libcurl4-openssl-dev_7.68.0-1ubuntu2.5_amd64.deb ... 2021-05-15T22:41:30.5692079Z Unpacking libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-05-15T22:41:30.6388860Z Selecting previously unselected package libghc-pandoc-citeproc-data. 2021-05-15T22:41:30.6667188Z Preparing to unpack .../libghc-pandoc-citeproc-data_0.15.0.1-1build4_all.deb ... 2021-05-15T22:41:30.6680043Z Unpacking libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-05-15T22:41:30.7028191Z Selecting previously unselected package pandoc-citeproc. 2021-05-15T22:41:30.7324181Z Preparing to unpack .../pandoc-citeproc_0.15.0.1-1build4_amd64.deb ... 2021-05-15T22:41:30.7338344Z Unpacking pandoc-citeproc (0.15.0.1-1build4) ... 2021-05-15T22:41:30.7368323Z Replaced by files in installed package pandoc (2.7.3-1) ... 2021-05-15T22:41:32.1221986Z Setting up libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-05-15T22:41:32.1252445Z Setting up libbibutils6 (6.2-1) ... 2021-05-15T22:41:32.1290581Z Setting up libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-05-15T22:41:32.1329573Z Setting up pandoc-citeproc (0.15.0.1-1build4) ... 2021-05-15T22:41:32.1370240Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T22:41:35.3866309Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T22:41:37.4191851Z ##[group]Run remotes::install_github("ropensci/tic") 2021-05-15T22:41:37.4192586Z remotes::install_github("ropensci/tic") 2021-05-15T22:41:37.4193274Z remotes::install_github("muschellij2/ghtravis") 2021-05-15T22:41:37.4193998Z remotes::install_github("muschellij2/aghast") 2021-05-15T22:41:37.4194628Z remotes::install_cran("covr") 2021-05-15T22:41:37.4201411Z shell: /usr/local/bin/Rscript {0} 2021-05-15T22:41:37.4202352Z env: 2021-05-15T22:41:37.4202853Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:41:37.4203350Z TIC_DEPLOY_KEY: 2021-05-15T22:41:37.4204206Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:41:37.4206545Z GITHUB_PAT: *** 2021-05-15T22:41:37.4207016Z COVERALLS_TOKEN: 2021-05-15T22:41:37.4207550Z continue-on-error: true 2021-05-15T22:41:37.4208092Z VDIFFR_RUN_TESTS: 2021-05-15T22:41:37.4208626Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:41:37.4209167Z TZ: UTC 2021-05-15T22:41:37.4209609Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:41:37.4210079Z NOT_CRAN: true 2021-05-15T22:41:37.4210490Z ##[endgroup] 2021-05-15T22:41:37.6065774Z Using github PAT from envvar GITHUB_PAT 2021-05-15T22:41:38.7395417Z Downloading GitHub repo ropensci/tic@HEAD 2021-05-15T22:41:53.2932970Z rlang (NA -> 0.4.11) [CRAN] 2021-05-15T22:41:53.2939527Z magrittr (NA -> 2.0.1 ) [CRAN] 2021-05-15T22:41:53.2940563Z glue (NA -> 1.4.2 ) [CRAN] 2021-05-15T22:41:53.2941576Z sys (NA -> 3.4 ) [CRAN] 2021-05-15T22:41:53.2942873Z askpass (NA -> 1.1 ) [CRAN] 2021-05-15T22:41:53.2944986Z Installing 31 packages: rlang, magrittr, glue, sys, askpass, openssl, mime, curl, jsonlite, ini, httr, gitcreds, cli, zip, rstudioapi, credentials, fastmap, yaml, withr, whisker, rappdirs, purrr, lifecycle, gh, gert, fs, clipr, cachem, usethis, memoise, git2r 2021-05-15T22:41:53.2947097Z openssl (NA -> 1.4.4 ) [CRAN] 2021-05-15T22:41:53.2948070Z mime (NA -> 0.10 ) [CRAN] 2021-05-15T22:41:53.2948973Z curl (NA -> 4.3.1 ) [CRAN] 2021-05-15T22:41:53.2949908Z jsonlite (NA -> 1.7.2 ) [CRAN] 2021-05-15T22:41:53.2950843Z ini (NA -> 0.3.1 ) [CRAN] 2021-05-15T22:41:53.2951734Z httr (NA -> 1.4.2 ) [CRAN] 2021-05-15T22:41:53.2952666Z gitcreds (NA -> 0.1.1 ) [CRAN] 2021-05-15T22:41:53.2953579Z cli (NA -> 2.5.0 ) [CRAN] 2021-05-15T22:41:53.2954563Z zip (NA -> 2.1.1 ) [CRAN] 2021-05-15T22:41:53.2962719Z rstudioapi (NA -> 0.13 ) [CRAN] 2021-05-15T22:41:53.2964788Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-15T22:41:53.2966365Z (as ‘lib’ is unspecified) 2021-05-15T22:41:53.2967731Z credentials (NA -> 1.3.0 ) [CRAN] 2021-05-15T22:41:53.2969034Z fastmap (NA -> 1.1.0 ) [CRAN] 2021-05-15T22:41:53.2970217Z yaml (NA -> 2.2.1 ) [CRAN] 2021-05-15T22:41:53.2971401Z withr (NA -> 2.4.2 ) [CRAN] 2021-05-15T22:41:53.2972620Z whisker (NA -> 0.4 ) [CRAN] 2021-05-15T22:41:53.2973876Z rappdirs (NA -> 0.3.3 ) [CRAN] 2021-05-15T22:41:53.2975120Z purrr (NA -> 0.3.4 ) [CRAN] 2021-05-15T22:41:53.2976339Z lifecycle (NA -> 1.0.0 ) [CRAN] 2021-05-15T22:41:53.2977561Z gh (NA -> 1.3.0 ) [CRAN] 2021-05-15T22:41:53.2978719Z gert (NA -> 1.3.0 ) [CRAN] 2021-05-15T22:41:53.2979887Z fs (NA -> 1.5.0 ) [CRAN] 2021-05-15T22:41:53.2981045Z clipr (NA -> 0.7.1 ) [CRAN] 2021-05-15T22:41:53.2982245Z cachem (NA -> 1.0.5 ) [CRAN] 2021-05-15T22:41:53.2983448Z usethis (NA -> 2.0.1 ) [CRAN] 2021-05-15T22:41:53.2985060Z memoise (NA -> 2.0.0 ) [CRAN] 2021-05-15T22:41:53.2988123Z git2r (NA -> 0.28.0) [CRAN] 2021-05-15T22:42:07.6162580Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rlang_0.4.11.tar.gz' 2021-05-15T22:42:07.9023977Z Content type 'binary/octet-stream' length 859995 bytes (839 KB) 2021-05-15T22:42:07.9277973Z ================================================== 2021-05-15T22:42:07.9278572Z downloaded 839 KB 2021-05-15T22:42:07.9279112Z 2021-05-15T22:42:07.9314668Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/magrittr_2.0.1.tar.gz' 2021-05-15T22:42:08.3248961Z Content type 'binary/octet-stream' length 264532 bytes (258 KB) 2021-05-15T22:42:08.3414655Z ================================================== 2021-05-15T22:42:08.3415247Z downloaded 258 KB 2021-05-15T22:42:08.3415573Z 2021-05-15T22:42:08.3456747Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/glue_1.4.2.tar.gz' 2021-05-15T22:42:08.7352033Z Content type 'binary/octet-stream' length 100043 bytes (97 KB) 2021-05-15T22:42:08.7428891Z ================================================== 2021-05-15T22:42:08.7429426Z downloaded 97 KB 2021-05-15T22:42:08.7429725Z 2021-05-15T22:42:08.7461528Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sys_3.4.tar.gz' 2021-05-15T22:42:09.0340254Z Content type 'binary/octet-stream' length 20291 bytes (19 KB) 2021-05-15T22:42:09.0342305Z ================================================== 2021-05-15T22:42:09.0343643Z downloaded 19 KB 2021-05-15T22:42:09.0344541Z 2021-05-15T22:42:09.0375973Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/askpass_1.1.tar.gz' 2021-05-15T22:42:09.3147555Z Content type 'application/x-tar' length 5688 bytes 2021-05-15T22:42:09.3150676Z ================================================== 2021-05-15T22:42:09.3151575Z downloaded 5688 bytes 2021-05-15T22:42:09.3153699Z 2021-05-15T22:42:09.3204474Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/openssl_1.4.4.tar.gz' 2021-05-15T22:42:09.7124871Z Content type 'binary/octet-stream' length 1311683 bytes (1.3 MB) 2021-05-15T22:42:09.7432396Z ================================================== 2021-05-15T22:42:09.7432928Z downloaded 1.3 MB 2021-05-15T22:42:09.7433234Z 2021-05-15T22:42:09.7464129Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/mime_0.10.tar.gz' 2021-05-15T22:42:10.0224482Z Content type 'binary/octet-stream' length 12958 bytes (12 KB) 2021-05-15T22:42:10.0226976Z ================================================== 2021-05-15T22:42:10.0228261Z downloaded 12 KB 2021-05-15T22:42:10.0229189Z 2021-05-15T22:42:10.0256839Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/curl_4.3.1.tar.gz' 2021-05-15T22:42:10.2053943Z Content type 'binary/octet-stream' length 798588 bytes (779 KB) 2021-05-15T22:42:10.2294976Z ================================================== 2021-05-15T22:42:10.2296036Z downloaded 779 KB 2021-05-15T22:42:10.2296561Z 2021-05-15T22:42:10.2332271Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/jsonlite_1.7.2.tar.gz' 2021-05-15T22:42:10.5104032Z Content type 'binary/octet-stream' length 422264 bytes (412 KB) 2021-05-15T22:42:10.5323991Z ================================================== 2021-05-15T22:42:10.5324606Z downloaded 412 KB 2021-05-15T22:42:10.5324971Z 2021-05-15T22:42:10.5360308Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ini_0.3.1.tar.gz' 2021-05-15T22:42:10.8200830Z Content type 'application/x-tar' length 3475 bytes 2021-05-15T22:42:10.8202796Z ================================================== 2021-05-15T22:42:10.8204065Z downloaded 3475 bytes 2021-05-15T22:42:10.8205165Z 2021-05-15T22:42:10.8224556Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/httr_1.4.2.tar.gz' 2021-05-15T22:42:11.1092426Z Content type 'binary/octet-stream' length 159877 bytes (156 KB) 2021-05-15T22:42:11.2197438Z ================================================== 2021-05-15T22:42:11.2199024Z downloaded 156 KB 2021-05-15T22:42:11.2203745Z 2021-05-15T22:42:11.2250078Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gitcreds_0.1.1.tar.gz' 2021-05-15T22:42:11.6107986Z Content type 'binary/octet-stream' length 62129 bytes (60 KB) 2021-05-15T22:42:11.6162810Z ================================================== 2021-05-15T22:42:11.6163402Z downloaded 60 KB 2021-05-15T22:42:11.6163726Z 2021-05-15T22:42:11.6196616Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cli_2.5.0.tar.gz' 2021-05-15T22:42:12.1705952Z Content type 'binary/octet-stream' length 158132 bytes (154 KB) 2021-05-15T22:42:12.1828189Z ================================================== 2021-05-15T22:42:12.1829752Z downloaded 154 KB 2021-05-15T22:42:12.1830740Z 2021-05-15T22:42:12.1869036Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/zip_2.1.1.tar.gz' 2021-05-15T22:42:12.4784973Z Content type 'binary/octet-stream' length 113091 bytes (110 KB) 2021-05-15T22:42:12.4896806Z ================================================== 2021-05-15T22:42:12.4898102Z downloaded 110 KB 2021-05-15T22:42:12.4898665Z 2021-05-15T22:42:12.4931461Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rstudioapi_0.13.tar.gz' 2021-05-15T22:42:12.8843737Z Content type 'binary/octet-stream' length 109870 bytes (107 KB) 2021-05-15T22:42:12.8955815Z ================================================== 2021-05-15T22:42:12.8956507Z downloaded 107 KB 2021-05-15T22:42:12.8956894Z 2021-05-15T22:42:12.8993391Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/credentials_1.3.0.tar.gz' 2021-05-15T22:42:13.2952793Z Content type 'binary/octet-stream' length 230676 bytes (225 KB) 2021-05-15T22:42:13.3115198Z ================================================== 2021-05-15T22:42:13.3116201Z downloaded 225 KB 2021-05-15T22:42:13.3116771Z 2021-05-15T22:42:13.3158118Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fastmap_1.1.0.tar.gz' 2021-05-15T22:42:13.7090400Z Content type 'binary/octet-stream' length 44517 bytes (43 KB) 2021-05-15T22:42:13.7144001Z ================================================== 2021-05-15T22:42:13.7147347Z downloaded 43 KB 2021-05-15T22:42:13.7148001Z 2021-05-15T22:42:13.7181003Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/yaml_2.2.1.tar.gz' 2021-05-15T22:42:13.8985419Z Content type 'binary/octet-stream' length 92979 bytes (90 KB) 2021-05-15T22:42:13.9060919Z ================================================== 2021-05-15T22:42:13.9062549Z downloaded 90 KB 2021-05-15T22:42:13.9063477Z 2021-05-15T22:42:13.9162489Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/withr_2.4.2.tar.gz' 2021-05-15T22:42:14.1091195Z Content type 'binary/octet-stream' length 95150 bytes (92 KB) 2021-05-15T22:42:14.1167759Z ================================================== 2021-05-15T22:42:14.1168773Z downloaded 92 KB 2021-05-15T22:42:14.1169373Z 2021-05-15T22:42:14.1199712Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/whisker_0.4.tar.gz' 2021-05-15T22:42:14.3019286Z Content type 'application/x-tar' length 28675 bytes (28 KB) 2021-05-15T22:42:14.3021507Z ================================================== 2021-05-15T22:42:14.3022731Z downloaded 28 KB 2021-05-15T22:42:14.3023629Z 2021-05-15T22:42:14.3052396Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rappdirs_0.3.3.tar.gz' 2021-05-15T22:42:14.6999330Z Content type 'binary/octet-stream' length 12326 bytes (12 KB) 2021-05-15T22:42:14.7002658Z ================================================== 2021-05-15T22:42:14.7004584Z downloaded 12 KB 2021-05-15T22:42:14.7005993Z 2021-05-15T22:42:14.7028925Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/purrr_0.3.4.tar.gz' 2021-05-15T22:42:14.9842008Z Content type 'binary/octet-stream' length 373001 bytes (364 KB) 2021-05-15T22:42:15.0042697Z ================================================== 2021-05-15T22:42:15.0044827Z downloaded 364 KB 2021-05-15T22:42:15.0046156Z 2021-05-15T22:42:15.0074597Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lifecycle_1.0.0.tar.gz' 2021-05-15T22:42:15.2835512Z Content type 'binary/octet-stream' length 83493 bytes (81 KB) 2021-05-15T22:42:15.2896662Z ================================================== 2021-05-15T22:42:15.2897714Z downloaded 81 KB 2021-05-15T22:42:15.2898325Z 2021-05-15T22:42:15.2932582Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gh_1.3.0.tar.gz' 2021-05-15T22:42:15.6801794Z Content type 'binary/octet-stream' length 45853 bytes (44 KB) 2021-05-15T22:42:15.6855562Z ================================================== 2021-05-15T22:42:15.6856522Z downloaded 44 KB 2021-05-15T22:42:15.6857147Z 2021-05-15T22:42:15.6892981Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gert_1.3.0.tar.gz' 2021-05-15T22:42:16.0794071Z Content type 'binary/octet-stream' length 66528 bytes (64 KB) 2021-05-15T22:42:16.0857170Z ================================================== 2021-05-15T22:42:16.0858792Z downloaded 64 KB 2021-05-15T22:42:16.0859515Z 2021-05-15T22:42:16.0900571Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fs_1.5.0.tar.gz' 2021-05-15T22:42:16.2742789Z Content type 'binary/octet-stream' length 800044 bytes (781 KB) 2021-05-15T22:42:16.3007695Z ================================================== 2021-05-15T22:42:16.3009248Z downloaded 781 KB 2021-05-15T22:42:16.3010193Z 2021-05-15T22:42:16.3040628Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/clipr_0.7.1.tar.gz' 2021-05-15T22:42:16.5947844Z Content type 'binary/octet-stream' length 20919 bytes (20 KB) 2021-05-15T22:42:16.5949942Z ================================================== 2021-05-15T22:42:16.5951079Z downloaded 20 KB 2021-05-15T22:42:16.5951896Z 2021-05-15T22:42:16.5996174Z trying URL 'https://cloud.r-project.org/src/contrib/cachem_1.0.5.tar.gz' 2021-05-15T22:42:16.7339718Z Content type 'application/x-gzip' length 24974 bytes (24 KB) 2021-05-15T22:42:16.7341860Z ================================================== 2021-05-15T22:42:16.7342966Z downloaded 24 KB 2021-05-15T22:42:16.7343755Z 2021-05-15T22:42:16.7366753Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/usethis_2.0.1.tar.gz' 2021-05-15T22:42:17.0136257Z Content type 'binary/octet-stream' length 304209 bytes (297 KB) 2021-05-15T22:42:17.0310092Z ================================================== 2021-05-15T22:42:17.0312136Z downloaded 297 KB 2021-05-15T22:42:17.0312709Z 2021-05-15T22:42:17.0348190Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/memoise_2.0.0.tar.gz' 2021-05-15T22:42:17.3420138Z Content type 'binary/octet-stream' length 17411 bytes (17 KB) 2021-05-15T22:42:17.3421535Z ================================================== 2021-05-15T22:42:17.3422382Z downloaded 17 KB 2021-05-15T22:42:17.3422938Z 2021-05-15T22:42:17.3481802Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/git2r_0.28.0.tar.gz' 2021-05-15T22:42:17.6371944Z Content type 'binary/octet-stream' length 1223574 bytes (1.2 MB) 2021-05-15T22:42:17.6665903Z ================================================== 2021-05-15T22:42:17.6666917Z downloaded 1.2 MB 2021-05-15T22:42:17.6667228Z 2021-05-15T22:42:18.1450603Z * installing *source* package ‘rlang’ ... 2021-05-15T22:42:18.1581667Z ** package ‘rlang’ successfully unpacked and MD5 sums checked 2021-05-15T22:42:18.1582612Z ** using staged installation 2021-05-15T22:42:18.1746352Z ** libs 2021-05-15T22:42:18.1827937Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c capture.c -o capture.o 2021-05-15T22:42:18.2986451Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c export.c -o export.o 2021-05-15T22:42:18.6084691Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c internal.c -o internal.o 2021-05-15T22:42:20.7334213Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c lib.c -o lib.o 2021-05-15T22:42:21.6481862Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-15T22:42:21.6876209Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o version.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:42:21.7389518Z installing to /home/runner/work/_temp/Library/00LOCK-rlang/00new/rlang/libs 2021-05-15T22:42:21.7402605Z ** R 2021-05-15T22:42:21.7857151Z ** inst 2021-05-15T22:42:21.7864161Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:42:24.6423805Z ** help 2021-05-15T22:42:25.2657940Z *** installing help indices 2021-05-15T22:42:25.5181865Z *** copying figures 2021-05-15T22:42:25.5183640Z ** building package indices 2021-05-15T22:42:25.9557109Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:42:26.2952598Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:42:26.5316217Z ** testing if installed package can be loaded from final location 2021-05-15T22:42:26.8094235Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:42:26.8129169Z * DONE (rlang) 2021-05-15T22:42:27.0683037Z * installing *source* package ‘magrittr’ ... 2021-05-15T22:42:27.0707054Z ** package ‘magrittr’ successfully unpacked and MD5 sums checked 2021-05-15T22:42:27.0708585Z ** using staged installation 2021-05-15T22:42:27.0837393Z ** libs 2021-05-15T22:42:27.0887277Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pipe.c -o pipe.o 2021-05-15T22:42:27.2254988Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-15T22:42:27.2816045Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o magrittr.so pipe.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:42:27.3070895Z installing to /home/runner/work/_temp/Library/00LOCK-magrittr/00new/magrittr/libs 2021-05-15T22:42:27.3084039Z ** R 2021-05-15T22:42:27.3124214Z ** inst 2021-05-15T22:42:27.3137473Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:42:27.5996821Z ** help 2021-05-15T22:42:27.6407038Z *** installing help indices 2021-05-15T22:42:27.6701763Z *** copying figures 2021-05-15T22:42:27.6704681Z ** building package indices 2021-05-15T22:42:27.8648623Z ** installing vignettes 2021-05-15T22:42:27.8713019Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:42:28.0371806Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:42:28.0567865Z ** testing if installed package can be loaded from final location 2021-05-15T22:42:28.2268341Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:42:28.2273948Z * DONE (magrittr) 2021-05-15T22:42:28.4488181Z * installing *source* package ‘glue’ ... 2021-05-15T22:42:28.4507454Z ** package ‘glue’ successfully unpacked and MD5 sums checked 2021-05-15T22:42:28.4511222Z ** using staged installation 2021-05-15T22:42:28.4647147Z ** libs 2021-05-15T22:42:28.4707419Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c glue.c -o glue.o 2021-05-15T22:42:28.5792399Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:42:28.6215821Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c trim.c -o trim.o 2021-05-15T22:42:28.6968729Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o glue.so glue.o init.o trim.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:42:28.7187836Z installing to /home/runner/work/_temp/Library/00LOCK-glue/00new/glue/libs 2021-05-15T22:42:28.7188863Z ** R 2021-05-15T22:42:28.7236124Z ** inst 2021-05-15T22:42:28.7247770Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:42:29.1665761Z ** help 2021-05-15T22:42:29.1972595Z *** installing help indices 2021-05-15T22:42:29.2281807Z *** copying figures 2021-05-15T22:42:29.2282983Z ** building package indices 2021-05-15T22:42:29.4307138Z ** installing vignettes 2021-05-15T22:42:29.4356015Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:42:29.6395189Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:42:29.6567693Z ** testing if installed package can be loaded from final location 2021-05-15T22:42:29.8636943Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:42:29.8645151Z * DONE (glue) 2021-05-15T22:42:30.0672368Z * installing *source* package ‘sys’ ... 2021-05-15T22:42:30.0686211Z ** package ‘sys’ successfully unpacked and MD5 sums checked 2021-05-15T22:42:30.0688073Z ** using staged installation 2021-05-15T22:42:30.0866326Z ** libs 2021-05-15T22:42:30.0921095Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c exec.c -o exec.o 2021-05-15T22:42:30.2847321Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:42:30.3273322Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o sys.so exec.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:42:30.3548247Z installing to /home/runner/work/_temp/Library/00LOCK-sys/00new/sys/libs 2021-05-15T22:42:30.3549784Z ** R 2021-05-15T22:42:30.3578472Z ** inst 2021-05-15T22:42:30.3586017Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:42:30.6205734Z ** help 2021-05-15T22:42:30.6398545Z *** installing help indices 2021-05-15T22:42:30.6588651Z ** building package indices 2021-05-15T22:42:30.8388851Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:42:31.0091698Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:42:31.0275280Z ** testing if installed package can be loaded from final location 2021-05-15T22:42:31.1911846Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:42:31.1917692Z * DONE (sys) 2021-05-15T22:42:31.3804464Z * installing *source* package ‘mime’ ... 2021-05-15T22:42:31.3813704Z ** package ‘mime’ successfully unpacked and MD5 sums checked 2021-05-15T22:42:31.3815373Z ** using staged installation 2021-05-15T22:42:31.3932319Z ** libs 2021-05-15T22:42:31.3992632Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:42:31.4437755Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rawmatch.c -o rawmatch.o 2021-05-15T22:42:31.5032623Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o mime.so init.o rawmatch.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:42:31.5158943Z installing to /home/runner/work/_temp/Library/00LOCK-mime/00new/mime/libs 2021-05-15T22:42:31.5170474Z ** R 2021-05-15T22:42:31.5229432Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:42:31.8163154Z ** help 2021-05-15T22:42:31.8371242Z *** installing help indices 2021-05-15T22:42:31.8509116Z ** building package indices 2021-05-15T22:42:32.0314387Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:42:32.1990804Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:42:32.2189743Z ** testing if installed package can be loaded from final location 2021-05-15T22:42:32.3851040Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:42:32.3858310Z * DONE (mime) 2021-05-15T22:42:32.7056614Z * installing *source* package ‘curl’ ... 2021-05-15T22:42:32.7131570Z ** package ‘curl’ successfully unpacked and MD5 sums checked 2021-05-15T22:42:32.7133214Z ** using staged installation 2021-05-15T22:42:32.7224636Z Found pkg-config cflags and libs! 2021-05-15T22:42:32.7979635Z Using PKG_CFLAGS=-I/usr/include/x86_64-linux-gnu 2021-05-15T22:42:32.7980534Z Using PKG_LIBS=-lcurl 2021-05-15T22:42:32.8424248Z ** libs 2021-05-15T22:42:32.8483671Z rm -f curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o 2021-05-15T22:42:32.8506699Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c callbacks.c -o callbacks.o 2021-05-15T22:42:32.9189350Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c curl.c -o curl.o 2021-05-15T22:42:33.0342223Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c download.c -o download.o 2021-05-15T22:42:33.1246121Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c escape.c -o escape.o 2021-05-15T22:42:33.1793678Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fetch.c -o fetch.o 2021-05-15T22:42:33.2700120Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c form.c -o form.o 2021-05-15T22:42:33.3377581Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c getdate.c -o getdate.o 2021-05-15T22:42:33.3873416Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c handle.c -o handle.o 2021-05-15T22:42:33.7142837Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ieproxy.c -o ieproxy.o 2021-05-15T22:42:33.7511029Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:42:33.8028362Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c interrupt.c -o interrupt.o 2021-05-15T22:42:33.8646924Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c multi.c -o multi.o 2021-05-15T22:42:34.0244364Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c nslookup.c -o nslookup.o 2021-05-15T22:42:34.0806527Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c reflist.c -o reflist.o 2021-05-15T22:42:34.1307049Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c split.c -o split.o 2021-05-15T22:42:34.1735992Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ssl.c -o ssl.o 2021-05-15T22:42:34.2217794Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typechecking.c -o typechecking.o 2021-05-15T22:42:34.2767087Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-15T22:42:34.3947972Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-15T22:42:34.4604894Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c winidn.c -o winidn.o 2021-05-15T22:42:34.4796919Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c writer.c -o writer.o 2021-05-15T22:42:34.5260365Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o -lcurl -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:42:34.5587813Z installing to /home/runner/work/_temp/Library/00LOCK-curl/00new/curl/libs 2021-05-15T22:42:34.5589075Z ** R 2021-05-15T22:42:34.5679516Z ** inst 2021-05-15T22:42:34.5708082Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:42:35.0105575Z ** help 2021-05-15T22:42:35.0557426Z *** installing help indices 2021-05-15T22:42:35.0867693Z ** building package indices 2021-05-15T22:42:35.2866990Z ** installing vignettes 2021-05-15T22:42:35.2874247Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:42:35.4563996Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:42:35.4744552Z ** testing if installed package can be loaded from final location 2021-05-15T22:42:35.6499829Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:42:35.6518374Z * DONE (curl) 2021-05-15T22:42:35.9455474Z * installing *source* package ‘jsonlite’ ... 2021-05-15T22:42:35.9511301Z ** package ‘jsonlite’ successfully unpacked and MD5 sums checked 2021-05-15T22:42:35.9512217Z ** using staged installation 2021-05-15T22:42:35.9635360Z ** libs 2021-05-15T22:42:35.9690725Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c base64.c -o base64.o 2021-05-15T22:42:36.0387600Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_array.c -o collapse_array.o 2021-05-15T22:42:36.0997166Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_object.c -o collapse_object.o 2021-05-15T22:42:36.1697463Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_pretty.c -o collapse_pretty.o 2021-05-15T22:42:36.2711412Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c escape_chars.c -o escape_chars.o 2021-05-15T22:42:36.3427768Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c integer64_to_na.c -o integer64_to_na.o 2021-05-15T22:42:36.3931801Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_datelist.c -o is_datelist.o 2021-05-15T22:42:36.4525643Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_recordlist.c -o is_recordlist.o 2021-05-15T22:42:36.5099775Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_scalarlist.c -o is_scalarlist.o 2021-05-15T22:42:36.5638459Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c modp_numtoa.c -o modp_numtoa.o 2021-05-15T22:42:36.6880339Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c null_to_na.c -o null_to_na.o 2021-05-15T22:42:36.7500844Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c num_to_char.c -o num_to_char.o 2021-05-15T22:42:36.8281437Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c parse.c -o parse.o 2021-05-15T22:42:36.8931436Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c prettify.c -o prettify.o 2021-05-15T22:42:36.9602219Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c push_parser.c -o push_parser.o 2021-05-15T22:42:37.0128276Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c r-base64.c -o r-base64.o 2021-05-15T22:42:37.0638167Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c register.c -o register.o 2021-05-15T22:42:37.1093808Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c row_collapse.c -o row_collapse.o 2021-05-15T22:42:37.1732123Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c transpose_list.c -o transpose_list.o 2021-05-15T22:42:37.2230326Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c validate.c -o validate.o 2021-05-15T22:42:37.2731750Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl.c -o yajl/yajl.o 2021-05-15T22:42:37.3358117Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o 2021-05-15T22:42:37.3639081Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_buf.c -o yajl/yajl_buf.o 2021-05-15T22:42:37.4120492Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_encode.c -o yajl/yajl_encode.o 2021-05-15T22:42:37.5098242Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_gen.c -o yajl/yajl_gen.o 2021-05-15T22:42:37.7375617Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_lex.c -o yajl/yajl_lex.o 2021-05-15T22:42:37.9897135Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_parser.c -o yajl/yajl_parser.o 2021-05-15T22:42:38.1508770Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_tree.c -o yajl/yajl_tree.o 2021-05-15T22:42:38.2798554Z ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o 2021-05-15T22:42:38.2871586Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:42:38.3188927Z installing to /home/runner/work/_temp/Library/00LOCK-jsonlite/00new/jsonlite/libs 2021-05-15T22:42:38.3190729Z ** R 2021-05-15T22:42:38.3336478Z ** inst 2021-05-15T22:42:38.3352780Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:42:39.4528730Z in method for ‘asJSON’ with signature ‘"blob"’: no definition for class “blob” 2021-05-15T22:42:39.4530778Z ** help 2021-05-15T22:42:39.4854486Z *** installing help indices 2021-05-15T22:42:39.5103663Z ** building package indices 2021-05-15T22:42:39.7142516Z ** installing vignettes 2021-05-15T22:42:39.7213258Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:42:39.9126352Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:42:39.9370127Z ** testing if installed package can be loaded from final location 2021-05-15T22:42:40.1319689Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:42:40.1336196Z * DONE (jsonlite) 2021-05-15T22:42:40.3213975Z * installing *source* package ‘ini’ ... 2021-05-15T22:42:40.3223994Z ** package ‘ini’ successfully unpacked and MD5 sums checked 2021-05-15T22:42:40.3228232Z ** using staged installation 2021-05-15T22:42:40.3324270Z ** R 2021-05-15T22:42:40.3348424Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:42:40.5545886Z ** help 2021-05-15T22:42:40.5654446Z *** installing help indices 2021-05-15T22:42:40.5870578Z ** building package indices 2021-05-15T22:42:40.7668789Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:42:40.9274015Z ** testing if installed package can be loaded from final location 2021-05-15T22:42:41.0808438Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:42:41.0813162Z * DONE (ini) 2021-05-15T22:42:41.2941655Z * installing *source* package ‘gitcreds’ ... 2021-05-15T22:42:41.2956358Z ** package ‘gitcreds’ successfully unpacked and MD5 sums checked 2021-05-15T22:42:41.2958271Z ** using staged installation 2021-05-15T22:42:41.3057711Z ** R 2021-05-15T22:42:41.3111735Z ** inst 2021-05-15T22:42:41.3124308Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:42:41.7587006Z ** help 2021-05-15T22:42:41.7825333Z *** installing help indices 2021-05-15T22:42:41.8022234Z ** building package indices 2021-05-15T22:42:41.9818656Z ** installing vignettes 2021-05-15T22:42:41.9866879Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:42:42.1558032Z ** testing if installed package can be loaded from final location 2021-05-15T22:42:42.3255368Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:42:42.3261200Z * DONE (gitcreds) 2021-05-15T22:42:42.5512117Z * installing *source* package ‘zip’ ... 2021-05-15T22:42:42.5532863Z ** package ‘zip’ successfully unpacked and MD5 sums checked 2021-05-15T22:42:42.5534541Z ** using staged installation 2021-05-15T22:42:42.5632892Z ** libs 2021-05-15T22:42:42.5678980Z gcc -g -O2 miniz.c zip.c unixutils.c tools/cmdzip.c -o tools/cmdzip 2021-05-15T22:42:45.0814956Z gcc -g -O2 miniz.c zip.c unixutils.c tools/cmdunzip.c -o tools/cmdunzip 2021-05-15T22:42:47.5793358Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:42:47.6201868Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c miniz.c -o miniz.o 2021-05-15T22:42:49.9811516Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rzip.c -o rzip.o 2021-05-15T22:42:50.0720758Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c zip.c -o zip.o 2021-05-15T22:42:50.1946480Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unixutils.c -o unixutils.o 2021-05-15T22:42:50.2502107Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o zip.so init.o miniz.o rzip.o zip.o unixutils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:42:50.2845160Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-zip/00new/zip 2021-05-15T22:42:50.2895523Z ** R 2021-05-15T22:42:50.2938371Z ** inst 2021-05-15T22:42:50.2948278Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:42:50.5960384Z ** help 2021-05-15T22:42:50.6159216Z *** installing help indices 2021-05-15T22:42:50.6383819Z ** building package indices 2021-05-15T22:42:50.8262044Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:42:51.0000144Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:42:51.0199245Z ** testing if installed package can be loaded from final location 2021-05-15T22:42:51.1912002Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:42:51.1919741Z * DONE (zip) 2021-05-15T22:42:51.4562960Z * installing *source* package ‘rstudioapi’ ... 2021-05-15T22:42:51.4599356Z ** package ‘rstudioapi’ successfully unpacked and MD5 sums checked 2021-05-15T22:42:51.4601401Z ** using staged installation 2021-05-15T22:42:51.4720732Z ** R 2021-05-15T22:42:51.4816955Z ** inst 2021-05-15T22:42:51.4833608Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:42:51.9871367Z ** help 2021-05-15T22:42:52.1646735Z *** installing help indices 2021-05-15T22:42:52.2747424Z *** copying figures 2021-05-15T22:42:52.2748533Z ** building package indices 2021-05-15T22:42:52.5787993Z ** installing vignettes 2021-05-15T22:42:52.5842580Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:42:52.7722548Z ** testing if installed package can be loaded from final location 2021-05-15T22:42:52.9703507Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:42:52.9713223Z * DONE (rstudioapi) 2021-05-15T22:42:53.2138580Z * installing *source* package ‘fastmap’ ... 2021-05-15T22:42:53.2155888Z ** package ‘fastmap’ successfully unpacked and MD5 sums checked 2021-05-15T22:42:53.2157841Z ** using staged installation 2021-05-15T22:42:53.2337445Z ** libs 2021-05-15T22:42:53.2401614Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilib/ -I/usr/local/include -DR_NO_REMAP -fpic -g -O2 -c fastmap.cpp -o fastmap.o 2021-05-15T22:42:55.2104914Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilib/ -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:42:55.2556272Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fastmap.so fastmap.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:42:55.3230008Z installing to /home/runner/work/_temp/Library/00LOCK-fastmap/00new/fastmap/libs 2021-05-15T22:42:55.3232270Z ** R 2021-05-15T22:42:55.3282607Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:42:55.7014514Z ** help 2021-05-15T22:42:55.7199361Z *** installing help indices 2021-05-15T22:42:55.7364484Z ** building package indices 2021-05-15T22:42:55.9226011Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:42:56.0972566Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:42:56.1145393Z ** testing if installed package can be loaded from final location 2021-05-15T22:42:56.2782428Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:42:56.2792519Z * DONE (fastmap) 2021-05-15T22:42:56.5108467Z * installing *source* package ‘yaml’ ... 2021-05-15T22:42:56.5133846Z ** package ‘yaml’ successfully unpacked and MD5 sums checked 2021-05-15T22:42:56.5135970Z ** using staged installation 2021-05-15T22:42:56.5227702Z ** libs 2021-05-15T22:42:56.5269278Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api.c -o api.o 2021-05-15T22:42:56.8899691Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dumper.c -o dumper.o 2021-05-15T22:42:57.0168028Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c emitter.c -o emitter.o 2021-05-15T22:42:58.0432556Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c implicit.c -o implicit.o 2021-05-15T22:42:58.2257633Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c loader.c -o loader.o 2021-05-15T22:42:58.3700847Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c parser.c -o parser.o 2021-05-15T22:42:58.7731511Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_emit.c -o r_emit.o 2021-05-15T22:42:59.0843893Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_ext.c -o r_ext.o 2021-05-15T22:42:59.1971396Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_parse.c -o r_parse.o 2021-05-15T22:42:59.6224923Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reader.c -o reader.o 2021-05-15T22:42:59.7274368Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c scanner.c -o scanner.o 2021-05-15T22:43:00.9569288Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c writer.c -o writer.o 2021-05-15T22:43:01.0156691Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o yaml.so api.o dumper.o emitter.o implicit.o loader.o parser.o r_emit.o r_ext.o r_parse.o reader.o scanner.o writer.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:43:01.0447401Z installing to /home/runner/work/_temp/Library/00LOCK-yaml/00new/yaml/libs 2021-05-15T22:43:01.0470183Z ** R 2021-05-15T22:43:01.0498233Z ** inst 2021-05-15T22:43:01.0510310Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:43:01.2870405Z ** help 2021-05-15T22:43:01.3083469Z *** installing help indices 2021-05-15T22:43:01.3315061Z ** building package indices 2021-05-15T22:43:01.5205451Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:43:01.6938855Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:43:01.7127301Z ** testing if installed package can be loaded from final location 2021-05-15T22:43:01.8776028Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:43:01.8781613Z * DONE (yaml) 2021-05-15T22:43:02.1243823Z * installing *source* package ‘withr’ ... 2021-05-15T22:43:02.1265903Z ** package ‘withr’ successfully unpacked and MD5 sums checked 2021-05-15T22:43:02.1268300Z ** using staged installation 2021-05-15T22:43:02.1406879Z ** R 2021-05-15T22:43:02.1496336Z ** inst 2021-05-15T22:43:02.1506246Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:43:02.7169991Z ** help 2021-05-15T22:43:02.7902099Z *** installing help indices 2021-05-15T22:43:02.8400297Z *** copying figures 2021-05-15T22:43:02.8402284Z ** building package indices 2021-05-15T22:43:03.0644832Z ** installing vignettes 2021-05-15T22:43:03.0708331Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:43:03.2397201Z ** testing if installed package can be loaded from final location 2021-05-15T22:43:03.4165394Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:43:03.4176046Z * DONE (withr) 2021-05-15T22:43:03.6511605Z * installing *source* package ‘whisker’ ... 2021-05-15T22:43:03.6530354Z ** package ‘whisker’ successfully unpacked and MD5 sums checked 2021-05-15T22:43:03.6532355Z ** using staged installation 2021-05-15T22:43:03.6631305Z ** R 2021-05-15T22:43:03.6670847Z ** inst 2021-05-15T22:43:03.6686550Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:43:04.0270514Z ** help 2021-05-15T22:43:04.0469400Z *** installing help indices 2021-05-15T22:43:04.0688401Z ** building package indices 2021-05-15T22:43:04.2589307Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:43:04.4321548Z ** testing if installed package can be loaded from final location 2021-05-15T22:43:04.5963431Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:43:04.5974844Z * DONE (whisker) 2021-05-15T22:43:04.7932200Z * installing *source* package ‘rappdirs’ ... 2021-05-15T22:43:04.7942724Z ** package ‘rappdirs’ successfully unpacked and MD5 sums checked 2021-05-15T22:43:04.7944810Z ** using staged installation 2021-05-15T22:43:04.8158907Z ** libs 2021-05-15T22:43:04.8211865Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:43:04.8628589Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c win-path.c -o win-path.o 2021-05-15T22:43:04.9077206Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rappdirs.so init.o win-path.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:43:04.9225236Z installing to /home/runner/work/_temp/Library/00LOCK-rappdirs/00new/rappdirs/libs 2021-05-15T22:43:04.9238843Z ** R 2021-05-15T22:43:04.9279455Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:43:05.2118999Z ** help 2021-05-15T22:43:05.2391013Z *** installing help indices 2021-05-15T22:43:05.2618319Z ** building package indices 2021-05-15T22:43:05.4648122Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:43:05.6437612Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:43:05.6627123Z ** testing if installed package can be loaded from final location 2021-05-15T22:43:05.8310372Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:43:05.8320924Z * DONE (rappdirs) 2021-05-15T22:43:06.2748204Z * installing *source* package ‘fs’ ... 2021-05-15T22:43:06.2864837Z ** package ‘fs’ successfully unpacked and MD5 sums checked 2021-05-15T22:43:06.2865492Z ** using staged installation 2021-05-15T22:43:06.2997383Z ** libs 2021-05-15T22:43:06.3065473Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c id.cc -o id.o 2021-05-15T22:43:06.8208671Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c file.cc -o file.o 2021-05-15T22:43:07.2661073Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c path.cc -o path.o 2021-05-15T22:43:07.6355821Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c fs.cc -o fs.o 2021-05-15T22:43:07.7148293Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c link.cc -o link.o 2021-05-15T22:43:08.0064592Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c utils.cc -o utils.o 2021-05-15T22:43:08.3064561Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c init.cc -o init.o 2021-05-15T22:43:08.4016441Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c dir.cc -o dir.o 2021-05-15T22:43:08.8181500Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c getmode.cc -o getmode.o 2021-05-15T22:43:09.1065743Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c error.cc -o error.o 2021-05-15T22:43:09.2124775Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c unix/getmode.cc -o unix/getmode.o 2021-05-15T22:43:09.5076847Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/setmode.c -o bsd/setmode.o 2021-05-15T22:43:09.6370745Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/strmode.c -o bsd/strmode.o 2021-05-15T22:43:09.6821325Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/reallocarray.c -o bsd/reallocarray.o 2021-05-15T22:43:09.7113889Z (cd libuv-1.38.1 \ 2021-05-15T22:43:09.7115419Z && CC="gcc" CFLAGS="-g -O2 -I/usr/local/include -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" LDFLAGS="-L/usr/local/lib" ./configure --quiet) 2021-05-15T22:43:14.8431913Z make --directory=libuv-1.38.1 \ 2021-05-15T22:43:14.8433141Z HAVE_DTRACE=0 2021-05-15T22:43:14.8538274Z make[1]: Entering directory '/tmp/RtmpZiIh9E/R.INSTALL79381858e99e/fs/src/libuv-1.38.1' 2021-05-15T22:43:14.8643119Z CC src/libuv_la-fs-poll.lo 2021-05-15T22:43:15.5439410Z CC src/libuv_la-idna.lo 2021-05-15T22:43:16.2377702Z CC src/libuv_la-inet.lo 2021-05-15T22:43:16.9285482Z CC src/libuv_la-random.lo 2021-05-15T22:43:17.5126617Z CC src/libuv_la-strscpy.lo 2021-05-15T22:43:18.0574701Z CC src/libuv_la-threadpool.lo 2021-05-15T22:43:18.8090327Z CC src/libuv_la-timer.lo 2021-05-15T22:43:19.5128651Z CC src/libuv_la-uv-data-getter-setters.lo 2021-05-15T22:43:20.1040674Z CC src/libuv_la-uv-common.lo 2021-05-15T22:43:21.3128554Z CC src/libuv_la-version.lo 2021-05-15T22:43:21.8485660Z CC src/unix/libuv_la-async.lo 2021-05-15T22:43:22.5144526Z CC src/unix/libuv_la-core.lo 2021-05-15T22:43:23.8034355Z CC src/unix/libuv_la-dl.lo 2021-05-15T22:43:24.3709819Z CC src/unix/libuv_la-fs.lo 2021-05-15T22:43:25.9773837Z CC src/unix/libuv_la-getaddrinfo.lo 2021-05-15T22:43:26.6365023Z CC src/unix/libuv_la-getnameinfo.lo 2021-05-15T22:43:27.2273964Z CC src/unix/libuv_la-loop-watcher.lo 2021-05-15T22:43:27.9021639Z CC src/unix/libuv_la-loop.lo 2021-05-15T22:43:28.5604656Z CC src/unix/libuv_la-pipe.lo 2021-05-15T22:43:29.2867209Z CC src/unix/libuv_la-poll.lo 2021-05-15T22:43:29.9155774Z CC src/unix/libuv_la-process.lo 2021-05-15T22:43:30.7714282Z CC src/unix/libuv_la-random-devurandom.lo 2021-05-15T22:43:31.3528393Z CC src/unix/libuv_la-signal.lo 2021-05-15T22:43:32.3484289Z CC src/unix/libuv_la-stream.lo 2021-05-15T22:43:33.5148127Z CC src/unix/libuv_la-tcp.lo 2021-05-15T22:43:34.2430323Z CC src/unix/libuv_la-thread.lo 2021-05-15T22:43:35.0856713Z CC src/unix/libuv_la-tty.lo 2021-05-15T22:43:35.7374406Z CC src/unix/libuv_la-udp.lo 2021-05-15T22:43:36.8250027Z CC src/unix/libuv_la-linux-core.lo 2021-05-15T22:43:37.9750675Z CC src/unix/libuv_la-linux-inotify.lo 2021-05-15T22:43:38.9122608Z CC src/unix/libuv_la-linux-syscalls.lo 2021-05-15T22:43:39.4335207Z CC src/unix/libuv_la-procfs-exepath.lo 2021-05-15T22:43:39.9791321Z CC src/unix/libuv_la-proctitle.lo 2021-05-15T22:43:40.5782494Z CC src/unix/libuv_la-random-getrandom.lo 2021-05-15T22:43:41.1227218Z CC src/unix/libuv_la-random-sysctl-linux.lo 2021-05-15T22:43:41.6782171Z CCLD libuv.la 2021-05-15T22:43:41.8876107Z ar: `u' modifier ignored since `D' is the default (see `U') 2021-05-15T22:43:41.9194569Z make[1]: Leaving directory '/tmp/RtmpZiIh9E/R.INSTALL79381858e99e/fs/src/libuv-1.38.1' 2021-05-15T22:43:41.9212839Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fs.so id.o file.o path.o fs.o link.o utils.o init.o dir.o getmode.o error.o unix/getmode.o bsd/setmode.o bsd/strmode.o bsd/reallocarray.o ./libuv-1.38.1/.libs/libuv.a -pthread -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:43:42.0108974Z installing to /home/runner/work/_temp/Library/00LOCK-fs/00new/fs/libs 2021-05-15T22:43:42.0135797Z ** R 2021-05-15T22:43:42.0233629Z ** inst 2021-05-15T22:43:42.0243772Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:43:43.0228038Z ** help 2021-05-15T22:43:43.0955081Z *** installing help indices 2021-05-15T22:43:43.1475015Z ** building package indices 2021-05-15T22:43:43.3787075Z ** installing vignettes 2021-05-15T22:43:43.3896549Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:43:43.6386534Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:43:43.6636600Z ** testing if installed package can be loaded from final location 2021-05-15T22:43:43.9112020Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:43:43.9128235Z * DONE (fs) 2021-05-15T22:43:44.1722393Z * installing *source* package ‘clipr’ ... 2021-05-15T22:43:44.1736742Z ** package ‘clipr’ successfully unpacked and MD5 sums checked 2021-05-15T22:43:44.1738114Z ** using staged installation 2021-05-15T22:43:44.1965879Z ** R 2021-05-15T22:43:44.2012356Z ** inst 2021-05-15T22:43:44.2022579Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:43:44.5631899Z ** help 2021-05-15T22:43:44.5858185Z *** installing help indices 2021-05-15T22:43:44.6093508Z ** building package indices 2021-05-15T22:43:44.8115348Z ** installing vignettes 2021-05-15T22:43:44.8180601Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:43:44.9918074Z ** testing if installed package can be loaded from final location 2021-05-15T22:43:45.1702470Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:43:45.1709281Z * DONE (clipr) 2021-05-15T22:43:45.8612213Z * installing *source* package ‘git2r’ ... 2021-05-15T22:43:45.8832855Z ** package ‘git2r’ successfully unpacked and MD5 sums checked 2021-05-15T22:43:45.8834888Z ** using staged installation 2021-05-15T22:43:46.0617337Z checking build system type... x86_64-unknown-linux-gnu 2021-05-15T22:43:46.0618828Z checking host system type... x86_64-unknown-linux-gnu 2021-05-15T22:43:46.0628219Z checking for gcc... gcc 2021-05-15T22:43:46.1195288Z checking whether the C compiler works... yes 2021-05-15T22:43:46.1196348Z checking for C compiler default output file name... a.out 2021-05-15T22:43:46.1542401Z checking for suffix of executables... 2021-05-15T22:43:46.1944679Z checking whether we are cross compiling... no 2021-05-15T22:43:46.2169065Z checking for suffix of object files... o 2021-05-15T22:43:46.2375013Z checking whether we are using the GNU C compiler... yes 2021-05-15T22:43:46.2572501Z checking whether gcc accepts -g... yes 2021-05-15T22:43:46.2947172Z checking for gcc option to accept ISO C89... none needed 2021-05-15T22:43:46.2956143Z checking for pkg-config... /usr/bin/pkg-config 2021-05-15T22:43:46.2970875Z checking pkg-config is at least version 0.9.0... yes 2021-05-15T22:43:46.3113660Z Found pkg-config cflags and libs! 2021-05-15T22:43:46.4007944Z checking whether the libgit2 version will work in git2r... yes 2021-05-15T22:43:46.5237929Z checking whether the libgit2 function git_buf_dispose is available... yes 2021-05-15T22:43:46.6460273Z checking whether the libgit2 constant GIT_OBJECT_ANY is available... yes 2021-05-15T22:43:46.7684808Z checking whether the libgit2 function git_error_last is available... yes 2021-05-15T22:43:46.8924831Z checking whether the libgit2 function git_oid_is_zero is available... no 2021-05-15T22:43:46.8926572Z ----- Results of the git2r package configure ----- 2021-05-15T22:43:46.8929007Z 2021-05-15T22:43:46.8930138Z PKG_CFLAGS: -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR 2021-05-15T22:43:46.8937524Z PKG_LIBS: -lgit2 2021-05-15T22:43:46.8937866Z 2021-05-15T22:43:46.8938566Z -------------------------------------------------- 2021-05-15T22:43:46.9131464Z configure: creating ./config.status 2021-05-15T22:43:46.9881757Z config.status: creating src/Makevars 2021-05-15T22:43:47.0450703Z ** libs 2021-05-15T22:43:47.0514548Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r.c -o git2r.o 2021-05-15T22:43:47.1182759Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_S3.c -o git2r_S3.o 2021-05-15T22:43:47.1752398Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_arg.c -o git2r_arg.o 2021-05-15T22:43:47.3340800Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_blame.c -o git2r_blame.o 2021-05-15T22:43:47.4216307Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_blob.c -o git2r_blob.o 2021-05-15T22:43:47.5537630Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_branch.c -o git2r_branch.o 2021-05-15T22:43:47.7837206Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_checkout.c -o git2r_checkout.o 2021-05-15T22:43:47.8756740Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_clone.c -o git2r_clone.o 2021-05-15T22:43:47.9678925Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_commit.c -o git2r_commit.o 2021-05-15T22:43:48.1335792Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_config.c -o git2r_config.o 2021-05-15T22:43:48.3054478Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_cred.c -o git2r_cred.o 2021-05-15T22:43:48.4022653Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_diff.c -o git2r_diff.o 2021-05-15T22:43:48.6443043Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_error.c -o git2r_error.o 2021-05-15T22:43:48.7115415Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_graph.c -o git2r_graph.o 2021-05-15T22:43:48.8029631Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_index.c -o git2r_index.o 2021-05-15T22:43:48.9005894Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_libgit2.c -o git2r_libgit2.o 2021-05-15T22:43:48.9916744Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_merge.c -o git2r_merge.o 2021-05-15T22:43:49.1856826Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_note.c -o git2r_note.o 2021-05-15T22:43:49.3311213Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_object.c -o git2r_object.o 2021-05-15T22:43:49.4281633Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_odb.c -o git2r_odb.o 2021-05-15T22:43:49.6093761Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_oid.c -o git2r_oid.o 2021-05-15T22:43:49.6824864Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_push.c -o git2r_push.o 2021-05-15T22:43:49.7748009Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reference.c -o git2r_reference.o 2021-05-15T22:43:49.8780173Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reflog.c -o git2r_reflog.o 2021-05-15T22:43:49.9867175Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_remote.c -o git2r_remote.o 2021-05-15T22:43:50.1557925Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_repository.c -o git2r_repository.o 2021-05-15T22:43:50.3036129Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reset.c -o git2r_reset.o 2021-05-15T22:43:50.3799261Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_revparse.c -o git2r_revparse.o 2021-05-15T22:43:50.4571053Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_revwalk.c -o git2r_revwalk.o 2021-05-15T22:43:50.6281015Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_signature.c -o git2r_signature.o 2021-05-15T22:43:50.7032423Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_stash.c -o git2r_stash.o 2021-05-15T22:43:50.8090205Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_status.c -o git2r_status.o 2021-05-15T22:43:50.9572751Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_tag.c -o git2r_tag.o 2021-05-15T22:43:51.0767496Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_transfer.c -o git2r_transfer.o 2021-05-15T22:43:51.1397919Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_tree.c -o git2r_tree.o 2021-05-15T22:43:51.2462756Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o git2r.so git2r.o git2r_S3.o git2r_arg.o git2r_blame.o git2r_blob.o git2r_branch.o git2r_checkout.o git2r_clone.o git2r_commit.o git2r_config.o git2r_cred.o git2r_diff.o git2r_error.o git2r_graph.o git2r_index.o git2r_libgit2.o git2r_merge.o git2r_note.o git2r_object.o git2r_odb.o git2r_oid.o git2r_push.o git2r_reference.o git2r_reflog.o git2r_remote.o git2r_repository.o git2r_reset.o git2r_revparse.o git2r_revwalk.o git2r_signature.o git2r_stash.o git2r_status.o git2r_tag.o git2r_transfer.o git2r_tree.o -lgit2 -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:43:51.2822982Z installing to /home/runner/work/_temp/Library/00LOCK-git2r/00new/git2r/libs 2021-05-15T22:43:51.2843029Z ** R 2021-05-15T22:43:51.3035621Z ** inst 2021-05-15T22:43:51.3046262Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:43:52.1409539Z ** help 2021-05-15T22:43:52.3887669Z *** installing help indices 2021-05-15T22:43:52.5787332Z ** building package indices 2021-05-15T22:43:52.9228301Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:43:53.1257817Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:43:53.1459660Z ** testing if installed package can be loaded from final location 2021-05-15T22:43:53.3647129Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:43:53.3661361Z * DONE (git2r) 2021-05-15T22:43:53.6060713Z * installing *source* package ‘askpass’ ... 2021-05-15T22:43:53.6071371Z ** package ‘askpass’ successfully unpacked and MD5 sums checked 2021-05-15T22:43:53.6073301Z ** using staged installation 2021-05-15T22:43:53.6221015Z ** libs 2021-05-15T22:43:53.6272353Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c askpass.c -o askpass.o 2021-05-15T22:43:53.6812465Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o askpass.so askpass.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:43:53.7011995Z installing to /home/runner/work/_temp/Library/00LOCK-askpass/00new/askpass/libs 2021-05-15T22:43:53.7027532Z ** R 2021-05-15T22:43:53.7057749Z ** inst 2021-05-15T22:43:53.7067024Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:43:53.9604409Z ** help 2021-05-15T22:43:53.9783984Z *** installing help indices 2021-05-15T22:43:53.9932661Z ** building package indices 2021-05-15T22:43:54.1876959Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:43:54.3820933Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:43:54.4020526Z ** testing if installed package can be loaded from final location 2021-05-15T22:43:54.5944431Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:43:54.5954724Z * DONE (askpass) 2021-05-15T22:43:54.9407016Z * installing *source* package ‘cli’ ... 2021-05-15T22:43:54.9460592Z ** package ‘cli’ successfully unpacked and MD5 sums checked 2021-05-15T22:43:54.9462154Z ** using staged installation 2021-05-15T22:43:54.9626711Z ** R 2021-05-15T22:43:54.9867333Z ** inst 2021-05-15T22:43:54.9880917Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:43:57.3829820Z ** help 2021-05-15T22:43:57.5846053Z *** installing help indices 2021-05-15T22:43:57.7141210Z *** copying figures 2021-05-15T22:43:57.7142891Z ** building package indices 2021-05-15T22:43:58.0186854Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:43:58.2450388Z ** testing if installed package can be loaded from final location 2021-05-15T22:43:58.5045926Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:43:58.5080460Z * DONE (cli) 2021-05-15T22:43:58.8328009Z * installing *source* package ‘purrr’ ... 2021-05-15T22:43:58.8382763Z ** package ‘purrr’ successfully unpacked and MD5 sums checked 2021-05-15T22:43:58.8384175Z ** using staged installation 2021-05-15T22:43:58.8537457Z ** libs 2021-05-15T22:43:58.8591301Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c backports.c -o backports.o 2021-05-15T22:43:58.8994936Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-05-15T22:43:58.9896718Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c conditions.c -o conditions.o 2021-05-15T22:43:59.0745436Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c flatten.c -o flatten.o 2021-05-15T22:43:59.1904395Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:43:59.2369768Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c map.c -o map.o 2021-05-15T22:43:59.3627641Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pluck.c -o pluck.o 2021-05-15T22:43:59.5008728Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c transpose.c -o transpose.o 2021-05-15T22:43:59.5933739Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-15T22:43:59.6469043Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o purrr.so backports.o coerce.o conditions.o flatten.o init.o map.o pluck.o transpose.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:43:59.6761003Z installing to /home/runner/work/_temp/Library/00LOCK-purrr/00new/purrr/libs 2021-05-15T22:43:59.6787376Z ** R 2021-05-15T22:43:59.6956713Z ** inst 2021-05-15T22:43:59.6966633Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:44:00.8604897Z ** help 2021-05-15T22:44:01.0182415Z *** installing help indices 2021-05-15T22:44:01.1167522Z *** copying figures 2021-05-15T22:44:01.1172890Z ** building package indices 2021-05-15T22:44:01.3867298Z ** installing vignettes 2021-05-15T22:44:01.3931197Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:44:01.6013434Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:44:01.6201564Z ** testing if installed package can be loaded from final location 2021-05-15T22:44:01.8458913Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:44:01.8472605Z * DONE (purrr) 2021-05-15T22:44:02.1063411Z * installing *source* package ‘lifecycle’ ... 2021-05-15T22:44:02.1089114Z ** package ‘lifecycle’ successfully unpacked and MD5 sums checked 2021-05-15T22:44:02.1091219Z ** using staged installation 2021-05-15T22:44:02.1242611Z ** R 2021-05-15T22:44:02.1293230Z ** inst 2021-05-15T22:44:02.1304898Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:44:02.5368143Z ** help 2021-05-15T22:44:02.5675847Z *** installing help indices 2021-05-15T22:44:02.5896329Z *** copying figures 2021-05-15T22:44:02.5901624Z ** building package indices 2021-05-15T22:44:02.7987294Z ** installing vignettes 2021-05-15T22:44:02.7988174Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:44:02.9889664Z ** testing if installed package can be loaded from final location 2021-05-15T22:44:03.1869475Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:44:03.1876900Z * DONE (lifecycle) 2021-05-15T22:44:03.3910837Z * installing *source* package ‘cachem’ ... 2021-05-15T22:44:03.3922156Z ** package ‘cachem’ successfully unpacked and MD5 sums checked 2021-05-15T22:44:03.3924046Z ** using staged installation 2021-05-15T22:44:03.4048360Z ** libs 2021-05-15T22:44:03.4098225Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cache.c -o cache.o 2021-05-15T22:44:03.4850048Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:44:03.5329868Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o cachem.so cache.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:44:03.5550959Z installing to /home/runner/work/_temp/Library/00LOCK-cachem/00new/cachem/libs 2021-05-15T22:44:03.5566477Z ** R 2021-05-15T22:44:03.5691569Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:44:04.1189871Z ** help 2021-05-15T22:44:04.1452168Z *** installing help indices 2021-05-15T22:44:04.1680618Z ** building package indices 2021-05-15T22:44:04.3912359Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:44:04.5916248Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:44:04.6074946Z ** testing if installed package can be loaded from final location 2021-05-15T22:44:04.8053577Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:44:04.8061200Z * DONE (cachem) 2021-05-15T22:44:05.2511828Z * installing *source* package ‘openssl’ ... 2021-05-15T22:44:05.2642577Z ** package ‘openssl’ successfully unpacked and MD5 sums checked 2021-05-15T22:44:05.2643803Z ** using staged installation 2021-05-15T22:44:05.3099392Z Found pkg-config cflags and libs! 2021-05-15T22:44:05.4092248Z Using PKG_CFLAGS= 2021-05-15T22:44:05.7046691Z Using PKG_LIBS=-l:libssl.so.1.1 -l:libcrypto.so.1.1 2021-05-15T22:44:05.7194670Z ** libs 2021-05-15T22:44:05.7246084Z rm -f aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o openssl.so bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o 2021-05-15T22:44:05.7265797Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o 2021-05-15T22:44:05.8058805Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-15T22:44:05.8808568Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bignum.c -o bignum.o 2021-05-15T22:44:05.9782846Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cert.c -o cert.o 2021-05-15T22:44:06.1391558Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c compatibility.c -o compatibility.o 2021-05-15T22:44:06.2030552Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffie.c -o diffie.o 2021-05-15T22:44:06.2940973Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c envelope.c -o envelope.o 2021-05-15T22:44:06.4062502Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error.c -o error.o 2021-05-15T22:44:06.4536441Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c hash.c -o hash.o 2021-05-15T22:44:06.5543267Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c info.c -o info.o 2021-05-15T22:44:06.6176623Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keygen.c -o keygen.o 2021-05-15T22:44:06.7204610Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keys.c -o keys.o 2021-05-15T22:44:06.8698394Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c onload.c -o onload.o 2021-05-15T22:44:06.9745007Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c openssh.c -o openssh.o 2021-05-15T22:44:07.1872948Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c password.c -o password.o 2021-05-15T22:44:07.2497569Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pbkdf.c -o pbkdf.o 2021-05-15T22:44:07.2963662Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pem.c -o pem.o 2021-05-15T22:44:07.4339240Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs12.c -o pkcs12.o 2021-05-15T22:44:07.5868456Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs7.c -o pkcs7.o 2021-05-15T22:44:07.7085993Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rand.c -o rand.o 2021-05-15T22:44:07.7526056Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rsa.c -o rsa.o 2021-05-15T22:44:07.8453478Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signing.c -o signing.o 2021-05-15T22:44:07.9645250Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c ssl.c -o ssl.o 2021-05-15T22:44:08.1091632Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stream.c -o stream.o 2021-05-15T22:44:08.2319786Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write.c -o write.o 2021-05-15T22:44:08.3552731Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c x25519.c -o x25519.o 2021-05-15T22:44:08.4754288Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bcrypt/bcrypt_pbkdf.c -o bcrypt/bcrypt_pbkdf.o 2021-05-15T22:44:08.5467732Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bcrypt/blowfish.c -o bcrypt/blowfish.o 2021-05-15T22:44:08.7176090Z ar rcs bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o 2021-05-15T22:44:08.7229298Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o openssl.so aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o -Lbcrypt -lstatbcrypt -l:libssl.so.1.1 -l:libcrypto.so.1.1 -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:44:08.7752100Z installing to /home/runner/work/_temp/Library/00LOCK-openssl/00new/openssl/libs 2021-05-15T22:44:08.7768289Z ** R 2021-05-15T22:44:08.7875654Z ** inst 2021-05-15T22:44:08.7921423Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:44:09.6358354Z ** help 2021-05-15T22:44:09.6911708Z *** installing help indices 2021-05-15T22:44:09.7294673Z ** building package indices 2021-05-15T22:44:09.9394847Z ** installing vignettes 2021-05-15T22:44:09.9528554Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:44:10.1270687Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:44:10.1441412Z ** testing if installed package can be loaded from final location 2021-05-15T22:44:10.3335276Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:44:10.3347484Z * DONE (openssl) 2021-05-15T22:44:10.5357819Z * installing *source* package ‘memoise’ ... 2021-05-15T22:44:10.5372008Z ** package ‘memoise’ successfully unpacked and MD5 sums checked 2021-05-15T22:44:10.5372733Z ** using staged installation 2021-05-15T22:44:10.5504245Z ** R 2021-05-15T22:44:10.5594294Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:44:10.9202268Z ** help 2021-05-15T22:44:10.9448982Z *** installing help indices 2021-05-15T22:44:10.9668370Z ** building package indices 2021-05-15T22:44:11.1532933Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:44:11.3368921Z ** testing if installed package can be loaded from final location 2021-05-15T22:44:11.5166922Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:44:11.5173070Z * DONE (memoise) 2021-05-15T22:44:11.8053455Z * installing *source* package ‘httr’ ... 2021-05-15T22:44:11.8101006Z ** package ‘httr’ successfully unpacked and MD5 sums checked 2021-05-15T22:44:11.8102771Z ** using staged installation 2021-05-15T22:44:11.8243926Z ** R 2021-05-15T22:44:11.8393658Z ** demo 2021-05-15T22:44:11.8402616Z ** inst 2021-05-15T22:44:11.8414936Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:44:14.0115634Z ** help 2021-05-15T22:44:14.1688512Z *** installing help indices 2021-05-15T22:44:14.2701326Z ** building package indices 2021-05-15T22:44:14.5425603Z ** installing vignettes 2021-05-15T22:44:14.5501632Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:44:14.7263576Z ** testing if installed package can be loaded from final location 2021-05-15T22:44:14.9481049Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:44:14.9511837Z * DONE (httr) 2021-05-15T22:44:15.1762578Z * installing *source* package ‘credentials’ ... 2021-05-15T22:44:15.1781191Z ** package ‘credentials’ successfully unpacked and MD5 sums checked 2021-05-15T22:44:15.1782676Z ** using staged installation 2021-05-15T22:44:15.1909719Z ** R 2021-05-15T22:44:15.1954001Z ** inst 2021-05-15T22:44:15.1965698Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:44:15.5922841Z ** help 2021-05-15T22:44:15.6094759Z *** installing help indices 2021-05-15T22:44:15.6292120Z ** building package indices 2021-05-15T22:44:16.2891472Z ** installing vignettes 2021-05-15T22:44:16.2898905Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:44:16.2899982Z ** testing if installed package can be loaded from final location 2021-05-15T22:44:16.2900975Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:44:16.2901735Z * DONE (credentials) 2021-05-15T22:44:16.5114128Z * installing *source* package ‘gh’ ... 2021-05-15T22:44:16.5135139Z ** package ‘gh’ successfully unpacked and MD5 sums checked 2021-05-15T22:44:16.5136637Z ** using staged installation 2021-05-15T22:44:16.5272240Z ** R 2021-05-15T22:44:16.5342881Z ** inst 2021-05-15T22:44:16.5353906Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:44:17.4987172Z ** help 2021-05-15T22:44:17.5281542Z *** installing help indices 2021-05-15T22:44:17.5598183Z ** building package indices 2021-05-15T22:44:17.7748383Z ** installing vignettes 2021-05-15T22:44:17.7816492Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:44:18.0659851Z ** testing if installed package can be loaded from final location 2021-05-15T22:44:18.3502945Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:44:18.3517566Z * DONE (gh) 2021-05-15T22:44:18.6286112Z * installing *source* package ‘gert’ ... 2021-05-15T22:44:18.6313895Z ** package ‘gert’ successfully unpacked and MD5 sums checked 2021-05-15T22:44:18.6316002Z ** using staged installation 2021-05-15T22:44:18.6432007Z Found pkg-config cflags and libs! 2021-05-15T22:44:18.7399800Z Using PKG_CFLAGS= 2021-05-15T22:44:18.7400944Z Using PKG_LIBS=-lgit2 2021-05-15T22:44:18.7799074Z Configuration OK! 2021-05-15T22:44:18.7983680Z ** libs 2021-05-15T22:44:18.8038957Z rm -f gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o 2021-05-15T22:44:18.8071577Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c branch.c -o branch.o 2021-05-15T22:44:19.0458878Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c clone.c -o clone.o 2021-05-15T22:44:19.2952865Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c commit.c -o commit.o 2021-05-15T22:44:19.5511115Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c config.c -o config.o 2021-05-15T22:44:19.6462793Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c conflicts.c -o conflicts.o 2021-05-15T22:44:19.7279790Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c files.c -o files.o 2021-05-15T22:44:19.8959544Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:44:19.9646778Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c merge.c -o merge.o 2021-05-15T22:44:20.0677870Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rebase.c -o rebase.o 2021-05-15T22:44:20.1892308Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c stash.c -o stash.o 2021-05-15T22:44:20.2774445Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c submodules.c -o submodules.o 2021-05-15T22:44:20.3933080Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c tag.c -o tag.o 2021-05-15T22:44:20.4882155Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-15T22:44:20.6126500Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-15T22:44:20.6872280Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o -lgit2 -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:44:20.7186828Z installing to /home/runner/work/_temp/Library/00LOCK-gert/00new/gert/libs 2021-05-15T22:44:20.7202288Z ** R 2021-05-15T22:44:20.7323653Z ** inst 2021-05-15T22:44:20.7337167Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:44:21.4490584Z ** help 2021-05-15T22:44:21.5074901Z *** installing help indices 2021-05-15T22:44:21.5472545Z ** building package indices 2021-05-15T22:44:21.7664185Z ** installing vignettes 2021-05-15T22:44:21.7765189Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:44:21.9963597Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:44:22.0144119Z ** testing if installed package can be loaded from final location 2021-05-15T22:44:22.2378183Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:44:22.2387028Z * DONE (gert) 2021-05-15T22:44:22.6564882Z * installing *source* package ‘usethis’ ... 2021-05-15T22:44:22.6650890Z ** package ‘usethis’ successfully unpacked and MD5 sums checked 2021-05-15T22:44:22.6651980Z ** using staged installation 2021-05-15T22:44:22.6914941Z ** R 2021-05-15T22:44:22.7266918Z ** inst 2021-05-15T22:44:22.7298374Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:44:25.3095108Z ** help 2021-05-15T22:44:25.5009962Z *** installing help indices 2021-05-15T22:44:25.6131530Z *** copying figures 2021-05-15T22:44:25.6137904Z ** building package indices 2021-05-15T22:44:25.9139720Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:44:26.1817482Z ** testing if installed package can be loaded from final location 2021-05-15T22:44:26.4998798Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:44:26.5039508Z * DONE (usethis) 2021-05-15T22:44:26.5151381Z 2021-05-15T22:44:26.5153530Z The downloaded source packages are in 2021-05-15T22:44:26.5155020Z ‘/tmp/Rtmp3iS4hL/downloaded_packages’ 2021-05-15T22:44:26.5155800Z Running `R CMD build`... 2021-05-15T22:44:28.6371843Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-15T22:44:28.6374548Z * checking for file ‘/tmp/Rtmp3iS4hL/remotes7306658554c5/ropensci-tic-3b4dfb8/DESCRIPTION’ ... OK 2021-05-15T22:44:28.6378026Z (as ‘lib’ is unspecified) 2021-05-15T22:44:28.6379231Z * preparing ‘tic’: 2021-05-15T22:44:28.6381353Z * checking DESCRIPTION meta-information ... OK 2021-05-15T22:44:28.6383055Z * installing the package to process help pages 2021-05-15T22:44:28.6384453Z * checking for LF line-endings in source and make files and shell scripts 2021-05-15T22:44:28.6385227Z * checking for empty or unneeded directories 2021-05-15T22:44:28.6386013Z Removed empty directory ‘tic/.circleci’ 2021-05-15T22:44:28.6387089Z Removed empty directory ‘tic/pkgdown’ 2021-05-15T22:44:28.6387742Z * building ‘tic_0.10.0.tar.gz’ 2021-05-15T22:44:28.9523643Z * installing *source* package ‘tic’ ... 2021-05-15T22:44:28.9548491Z ** using staged installation 2021-05-15T22:44:28.9786601Z ** R 2021-05-15T22:44:28.9966976Z ** inst 2021-05-15T22:44:28.9997417Z ** preparing package for lazy loading 2021-05-15T22:44:29.3821908Z ** help 2021-05-15T22:44:29.5383733Z *** installing help indices 2021-05-15T22:44:29.6262717Z *** copying figures 2021-05-15T22:44:29.6265969Z ** building package indices 2021-05-15T22:44:29.8858485Z ** installing vignettes 2021-05-15T22:44:29.8901580Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:44:30.1542647Z ** testing if installed package can be loaded from final location 2021-05-15T22:44:30.4604859Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:44:30.4643455Z * DONE (tic) 2021-05-15T22:44:30.4781339Z Using github PAT from envvar GITHUB_PAT 2021-05-15T22:44:30.6651239Z Downloading GitHub repo muschellij2/ghtravis@HEAD 2021-05-15T22:44:31.5353394Z desc (1.3.0 -> 7be86f2f7...) [GitHub] 2021-05-15T22:44:31.5357038Z Installing 37 packages: utf8, vctrs, pkgconfig, pillar, tibble, rematch2, fansi, diffobj, waldo, ps, processx, praise, pkgload, evaluate, ellipsis, digest, callr, brio, xml2, xfun, markdown, highr, stringr, stringi, Rcpp, knitr, commonmark, brew, xopen, sessioninfo, prettyunits, pkgbuild, testthat, rversions, roxygen2, rcmdcheck, devtools 2021-05-15T22:44:31.5360187Z utf8 (NA -> 1.2.1 ) [CRAN] 2021-05-15T22:44:31.5361593Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-15T22:44:31.5362625Z (as ‘lib’ is unspecified) 2021-05-15T22:44:31.5363829Z vctrs (NA -> 0.3.8 ) [CRAN] 2021-05-15T22:44:31.5364896Z pkgconfig (NA -> 2.0.3 ) [CRAN] 2021-05-15T22:44:31.5365982Z pillar (NA -> 1.6.0 ) [CRAN] 2021-05-15T22:44:31.5367037Z tibble (NA -> 3.1.1 ) [CRAN] 2021-05-15T22:44:31.5368113Z rematch2 (NA -> 2.1.2 ) [CRAN] 2021-05-15T22:44:31.5369181Z fansi (NA -> 0.4.2 ) [CRAN] 2021-05-15T22:44:31.5370202Z diffobj (NA -> 0.3.4 ) [CRAN] 2021-05-15T22:44:31.5371245Z waldo (NA -> 0.2.5 ) [CRAN] 2021-05-15T22:44:31.5372263Z ps (NA -> 1.6.0 ) [CRAN] 2021-05-15T22:44:31.5373295Z processx (NA -> 3.5.2 ) [CRAN] 2021-05-15T22:44:31.5374367Z praise (NA -> 1.0.0 ) [CRAN] 2021-05-15T22:44:31.5375419Z pkgload (NA -> 1.2.1 ) [CRAN] 2021-05-15T22:44:31.5376492Z evaluate (NA -> 0.14 ) [CRAN] 2021-05-15T22:44:31.5377576Z ellipsis (NA -> 0.3.2 ) [CRAN] 2021-05-15T22:44:31.5378625Z digest (NA -> 0.6.27 ) [CRAN] 2021-05-15T22:44:31.5379661Z callr (NA -> 3.7.0 ) [CRAN] 2021-05-15T22:44:31.5380658Z brio (NA -> 1.1.2 ) [CRAN] 2021-05-15T22:44:31.5381687Z xml2 (NA -> 1.3.2 ) [CRAN] 2021-05-15T22:44:31.5382709Z xfun (NA -> 0.23 ) [CRAN] 2021-05-15T22:44:31.5383739Z markdown (NA -> 1.1 ) [CRAN] 2021-05-15T22:44:31.5384800Z highr (NA -> 0.9 ) [CRAN] 2021-05-15T22:44:31.5385839Z stringr (NA -> 1.4.0 ) [CRAN] 2021-05-15T22:44:31.5387870Z stringi (NA -> 1.6.1 ) [CRAN] 2021-05-15T22:44:31.5388728Z Rcpp (NA -> 1.0.6 ) [CRAN] 2021-05-15T22:44:31.5389576Z knitr (NA -> 1.33 ) [CRAN] 2021-05-15T22:44:31.5390743Z commonmark (NA -> 1.7 ) [CRAN] 2021-05-15T22:44:31.5391625Z brew (NA -> 1.0-6 ) [CRAN] 2021-05-15T22:44:31.5392455Z xopen (NA -> 1.0.0 ) [CRAN] 2021-05-15T22:44:31.5393357Z sessioninfo (NA -> 1.1.1 ) [CRAN] 2021-05-15T22:44:31.5394292Z prettyunits (NA -> 1.1.1 ) [CRAN] 2021-05-15T22:44:31.5395188Z pkgbuild (NA -> 1.2.0 ) [CRAN] 2021-05-15T22:44:31.5396079Z testthat (NA -> 3.0.2 ) [CRAN] 2021-05-15T22:44:31.5397074Z rversions (NA -> 2.0.2 ) [CRAN] 2021-05-15T22:44:31.5398004Z roxygen2 (NA -> 7.1.1 ) [CRAN] 2021-05-15T22:44:31.5398884Z rcmdcheck (NA -> 1.3.3 ) [CRAN] 2021-05-15T22:44:31.5399782Z devtools (NA -> 2.4.1 ) [CRAN] 2021-05-15T22:44:46.4418510Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/utf8_1.2.1.tar.gz' 2021-05-15T22:44:46.7180408Z Content type 'binary/octet-stream' length 237667 bytes (232 KB) 2021-05-15T22:44:46.7346619Z ================================================== 2021-05-15T22:44:46.7347177Z downloaded 232 KB 2021-05-15T22:44:46.7347478Z 2021-05-15T22:44:46.7382061Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/vctrs_0.3.8.tar.gz' 2021-05-15T22:44:47.1294842Z Content type 'binary/octet-stream' length 784938 bytes (766 KB) 2021-05-15T22:44:47.1550173Z ================================================== 2021-05-15T22:44:47.1550740Z downloaded 766 KB 2021-05-15T22:44:47.1551063Z 2021-05-15T22:44:47.1590596Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgconfig_2.0.3.tar.gz' 2021-05-15T22:44:47.4322089Z Content type 'application/x-tar' length 6108 bytes 2021-05-15T22:44:47.4324162Z ================================================== 2021-05-15T22:44:47.4325558Z downloaded 6108 bytes 2021-05-15T22:44:47.4326481Z 2021-05-15T22:44:47.4357350Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pillar_1.6.0.tar.gz' 2021-05-15T22:44:47.7255082Z Content type 'binary/octet-stream' length 1103143 bytes (1.1 MB) 2021-05-15T22:44:47.7538135Z ================================================== 2021-05-15T22:44:47.7538972Z downloaded 1.1 MB 2021-05-15T22:44:47.7539508Z 2021-05-15T22:44:47.7574619Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tibble_3.1.1.tar.gz' 2021-05-15T22:44:48.1484045Z Content type 'binary/octet-stream' length 690530 bytes (674 KB) 2021-05-15T22:44:48.1730550Z ================================================== 2021-05-15T22:44:48.1733250Z downloaded 674 KB 2021-05-15T22:44:48.1733556Z 2021-05-15T22:44:48.1763016Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rematch2_2.1.2.tar.gz' 2021-05-15T22:44:48.4710006Z Content type 'binary/octet-stream' length 13441 bytes (13 KB) 2021-05-15T22:44:48.4712522Z ================================================== 2021-05-15T22:44:48.4713018Z downloaded 13 KB 2021-05-15T22:44:48.4713351Z 2021-05-15T22:44:48.4748568Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fansi_0.4.2.tar.gz' 2021-05-15T22:44:48.7599133Z Content type 'binary/octet-stream' length 270970 bytes (264 KB) 2021-05-15T22:44:48.7767742Z ================================================== 2021-05-15T22:44:48.7768267Z downloaded 264 KB 2021-05-15T22:44:48.7768569Z 2021-05-15T22:44:48.7804953Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/diffobj_0.3.4.tar.gz' 2021-05-15T22:44:49.0732302Z Content type 'binary/octet-stream' length 476003 bytes (464 KB) 2021-05-15T22:44:49.0959832Z ================================================== 2021-05-15T22:44:49.0960839Z downloaded 464 KB 2021-05-15T22:44:49.0961474Z 2021-05-15T22:44:49.0997076Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/waldo_0.2.5.tar.gz' 2021-05-15T22:44:49.3852305Z Content type 'binary/octet-stream' length 26261 bytes (25 KB) 2021-05-15T22:44:50.2995564Z ================================================== 2021-05-15T22:44:50.3000996Z downloaded 25 KB 2021-05-15T22:44:50.3001858Z 2021-05-15T22:44:50.3005359Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ps_1.6.0.tar.gz' 2021-05-15T22:44:50.3008973Z Content type 'binary/octet-stream' length 120042 bytes (117 KB) 2021-05-15T22:44:50.3010309Z ================================================== 2021-05-15T22:44:50.3011157Z downloaded 117 KB 2021-05-15T22:44:50.3012118Z 2021-05-15T22:44:50.3014752Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/processx_3.5.2.tar.gz' 2021-05-15T22:44:50.3017429Z Content type 'binary/octet-stream' length 141949 bytes (138 KB) 2021-05-15T22:44:50.3018777Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/evaluate_0.14.tar.gz' 2021-05-15T22:44:51.0395016Z Content type 'application/x-tar' length 23661 bytes (23 KB) 2021-05-15T22:44:51.0400711Z ================================================== 2021-05-15T22:44:51.0401272Z downloaded 23 KB 2021-05-15T22:44:51.0401617Z 2021-05-15T22:44:51.0457696Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ellipsis_0.3.2.tar.gz' 2021-05-15T22:44:51.3263055Z Content type 'binary/octet-stream' length 8130 bytes 2021-05-15T22:44:51.3264407Z ================================================== 2021-05-15T22:44:51.3265224Z downloaded 8130 bytes 2021-05-15T22:44:51.3265764Z 2021-05-15T22:44:51.3301574Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/digest_0.6.27.tar.gz' 2021-05-15T22:44:51.7150878Z Content type 'binary/octet-stream' length 164442 bytes (160 KB) 2021-05-15T22:44:51.7278937Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xml2_1.3.2.tar.gz' 2021-05-15T22:44:52.9294106Z Content type 'binary/octet-stream' length 272736 bytes (266 KB) 2021-05-15T22:44:52.9451033Z ================================================== 2021-05-15T22:44:52.9451600Z downloaded 266 KB 2021-05-15T22:44:52.9451910Z 2021-05-15T22:44:52.9489353Z trying URL 'https://cloud.r-project.org/src/contrib/xfun_0.23.tar.gz' 2021-05-15T22:44:53.0834203Z Content type 'application/x-gzip' length 111696 bytes (109 KB) 2021-05-15T22:44:53.0940925Z ================================================== 2021-05-15T22:44:53.0941747Z downloaded 109 KB 2021-05-15T22:44:53.0942239Z 2021-05-15T22:44:53.0969699Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/markdown_1.1.tar.gz' 2021-05-15T22:44:53.4964084Z Content type 'application/x-tar' length 81636 bytes (79 KB) 2021-05-15T22:44:53.6023759Z ================================================== 2021-05-15T22:44:53.6024710Z downloaded 79 KB 2021-05-15T22:44:53.6025273Z 2021-05-15T22:44:53.6070796Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/highr_0.9.tar.gz' 2021-05-15T22:44:53.8785588Z Content type 'binary/octet-stream' length 15361 bytes (15 KB) 2021-05-15T22:44:53.8788964Z ================================================== 2021-05-15T22:44:53.8790400Z downloaded 15 KB 2021-05-15T22:44:53.8791479Z 2021-05-15T22:44:53.8824203Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringr_1.4.0.tar.gz' 2021-05-15T22:44:54.1586516Z Content type 'application/x-tar' length 135526 bytes (132 KB) 2021-05-15T22:44:54.1695748Z ================================================== 2021-05-15T22:44:54.1696585Z downloaded 132 KB 2021-05-15T22:44:54.1697100Z 2021-05-15T22:44:54.1732117Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringi_1.6.1.tar.gz' 2021-05-15T22:44:54.3734499Z Content type 'binary/octet-stream' length 7574951 bytes (7.2 MB) 2021-05-15T22:44:54.4867871Z ================================================== 2021-05-15T22:44:54.4868717Z downloaded 7.2 MB 2021-05-15T22:44:54.4869223Z 2021-05-15T22:44:54.4903259Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/Rcpp_1.0.6.tar.gz' 2021-05-15T22:44:54.8850047Z Content type 'binary/octet-stream' length 2954251 bytes (2.8 MB) 2021-05-15T22:44:55.0201592Z ================================================== 2021-05-15T22:44:55.0202147Z downloaded 2.8 MB 2021-05-15T22:44:55.0202445Z 2021-05-15T22:44:55.0240537Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/knitr_1.33.tar.gz' 2021-05-15T22:44:55.2986292Z Content type 'binary/octet-stream' length 890176 bytes (869 KB) 2021-05-15T22:44:55.3250811Z ================================================== 2021-05-15T22:44:55.3251710Z downloaded 869 KB 2021-05-15T22:44:55.3252216Z 2021-05-15T22:44:55.3285253Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/commonmark_1.7.tar.gz' 2021-05-15T22:44:55.7590536Z Content type 'application/x-tar' length 134376 bytes (131 KB) 2021-05-15T22:44:55.7699719Z ================================================== 2021-05-15T22:44:55.7700547Z downloaded 131 KB 2021-05-15T22:44:55.7701131Z 2021-05-15T22:44:55.7737299Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brew_1.0-6.tar.gz' 2021-05-15T22:44:56.2804571Z Content type 'application/x-tar' length 83765 bytes (81 KB) 2021-05-15T22:44:56.2805582Z ================================================== 2021-05-15T22:44:56.2806193Z downloaded 81 KB 2021-05-15T22:44:56.2806571Z 2021-05-15T22:44:56.2858781Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xopen_1.0.0.tar.gz' 2021-05-15T22:44:56.6710827Z Content type 'application/x-tar' length 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgbuild_1.2.0.tar.gz' 2021-05-15T22:44:57.5505355Z Content type 'binary/octet-stream' length 30622 bytes (29 KB) 2021-05-15T22:44:57.5515336Z ================================================== 2021-05-15T22:44:57.5516700Z downloaded 29 KB 2021-05-15T22:44:57.5517512Z 2021-05-15T22:44:57.5567390Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/testthat_3.0.2.tar.gz' 2021-05-15T22:44:57.8347862Z Content type 'binary/octet-stream' length 678280 bytes (662 KB) 2021-05-15T22:44:57.8583998Z ================================================== 2021-05-15T22:44:57.8585565Z downloaded 662 KB 2021-05-15T22:44:57.8586871Z 2021-05-15T22:44:57.8623929Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rversions_2.0.2.tar.gz' 2021-05-15T22:44:58.1498735Z Content type 'binary/octet-stream' length 40913 bytes (39 KB) 2021-05-15T22:44:58.1560209Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/devtools_2.4.1.tar.gz' 2021-05-15T22:44:59.4865398Z Content type 'binary/octet-stream' length 370450 bytes (361 KB) 2021-05-15T22:44:59.5092398Z ================================================== 2021-05-15T22:44:59.5093510Z downloaded 361 KB 2021-05-15T22:44:59.5094076Z 2021-05-15T22:44:59.8589386Z * installing *source* package ‘utf8’ ... 2021-05-15T22:44:59.8660254Z ** package ‘utf8’ successfully unpacked and MD5 sums checked 2021-05-15T22:44:59.8664369Z ** using staged installation 2021-05-15T22:44:59.8812721Z ** libs 2021-05-15T22:44:59.8895952Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c as_utf8.c -o as_utf8.o 2021-05-15T22:44:59.9675069Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c bytes.c -o bytes.o 2021-05-15T22:45:00.1272573Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c context.c -o context.o 2021-05-15T22:45:00.1977094Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:45:00.2408419Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c render.c -o render.o 2021-05-15T22:45:00.3081839Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c render_table.c -o render_table.o 2021-05-15T22:45:00.4772303Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c string.c -o string.o 2021-05-15T22:45:00.5439420Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c text.c -o text.o 2021-05-15T22:45:00.6912742Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_encode.c -o utf8_encode.o 2021-05-15T22:45:00.7778051Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_format.c -o utf8_format.o 2021-05-15T22:45:00.8771816Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_normalize.c -o utf8_normalize.o 2021-05-15T22:45:00.9482010Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_valid.c -o utf8_valid.o 2021-05-15T22:45:01.0084877Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_width.c -o utf8_width.o 2021-05-15T22:45:01.0741256Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c util.c -o util.o 2021-05-15T22:45:01.1325216Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/array.c -o utf8lite/src/array.o 2021-05-15T22:45:01.1914234Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/char.c -o utf8lite/src/char.o 2021-05-15T22:45:01.2653182Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/encode.c -o utf8lite/src/encode.o 2021-05-15T22:45:01.3288390Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/error.c -o utf8lite/src/error.o 2021-05-15T22:45:01.3729948Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/escape.c -o utf8lite/src/escape.o 2021-05-15T22:45:01.4464775Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/graph.c -o utf8lite/src/graph.o 2021-05-15T22:45:01.4955858Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o 2021-05-15T22:45:01.7316417Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o 2021-05-15T22:45:02.0845952Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/render.c -o utf8lite/src/render.o 2021-05-15T22:45:02.2518521Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/text.c -o utf8lite/src/text.o 2021-05-15T22:45:02.3263148Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o 2021-05-15T22:45:02.3895024Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o 2021-05-15T22:45:02.4658756Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o 2021-05-15T22:45:02.5383649Z ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o 2021-05-15T22:45:02.5467253Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:45:02.5805148Z installing to /home/runner/work/_temp/Library/00LOCK-utf8/00new/utf8/libs 2021-05-15T22:45:02.5826995Z ** R 2021-05-15T22:45:02.5909414Z ** inst 2021-05-15T22:45:02.5920735Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:45:03.0536520Z ** help 2021-05-15T22:45:03.0823533Z *** installing help indices 2021-05-15T22:45:03.1067536Z ** building package indices 2021-05-15T22:45:03.3143860Z ** installing vignettes 2021-05-15T22:45:03.3195094Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:45:03.5040334Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:45:03.5223309Z ** testing if installed package can be loaded from final location 2021-05-15T22:45:03.7072420Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:45:03.7085757Z * DONE (utf8) 2021-05-15T22:45:03.9193701Z * installing *source* package ‘pkgconfig’ ... 2021-05-15T22:45:03.9202515Z ** package ‘pkgconfig’ successfully unpacked and MD5 sums checked 2021-05-15T22:45:03.9204491Z ** using staged installation 2021-05-15T22:45:03.9317588Z ** R 2021-05-15T22:45:03.9343011Z ** inst 2021-05-15T22:45:03.9350827Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:45:04.1599274Z ** help 2021-05-15T22:45:04.1818727Z *** installing help indices 2021-05-15T22:45:04.1996392Z ** building package indices 2021-05-15T22:45:04.3999609Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:45:04.5744018Z ** testing if installed package can be loaded from final location 2021-05-15T22:45:04.7454179Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:45:04.7459424Z * DONE (pkgconfig) 2021-05-15T22:45:05.0203707Z * installing *source* package ‘fansi’ ... 2021-05-15T22:45:05.0233582Z ** package ‘fansi’ successfully unpacked and MD5 sums checked 2021-05-15T22:45:05.0235771Z ** using staged installation 2021-05-15T22:45:05.0357049Z ** libs 2021-05-15T22:45:05.0444548Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c assumptions.c -o assumptions.o 2021-05-15T22:45:05.0858566Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c has.c -o has.o 2021-05-15T22:45:05.1621214Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:45:05.2143861Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c nchar.c -o nchar.o 2021-05-15T22:45:05.2951982Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read.c -o read.o 2021-05-15T22:45:05.7839244Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rnchar.c -o rnchar.o 2021-05-15T22:45:05.8259032Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c state.c -o state.o 2021-05-15T22:45:06.2493421Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c strip.c -o strip.o 2021-05-15T22:45:06.4046649Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c strsplit.c -o strsplit.o 2021-05-15T22:45:06.4499890Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c tabs.c -o tabs.o 2021-05-15T22:45:06.5828316Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c tohtml.c -o tohtml.o 2021-05-15T22:45:06.8475720Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unhandled.c -o unhandled.o 2021-05-15T22:45:06.9599226Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unique.c -o unique.o 2021-05-15T22:45:07.0249143Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-15T22:45:07.0889343Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-15T22:45:07.2702586Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c wrap.c -o wrap.o 2021-05-15T22:45:07.5980509Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fansi.so assumptions.o has.o init.o nchar.o read.o rnchar.o state.o strip.o strsplit.o tabs.o tohtml.o unhandled.o unique.o utf8.o utils.o wrap.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:45:07.6307938Z installing to /home/runner/work/_temp/Library/00LOCK-fansi/00new/fansi/libs 2021-05-15T22:45:07.6309190Z ** R 2021-05-15T22:45:07.6400620Z ** inst 2021-05-15T22:45:07.6410184Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:45:08.2306364Z ** help 2021-05-15T22:45:08.2912282Z *** installing help indices 2021-05-15T22:45:08.3274253Z ** building package indices 2021-05-15T22:45:08.5507264Z ** installing vignettes 2021-05-15T22:45:08.5563411Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:45:08.7371670Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:45:08.7568531Z ** testing if installed package can be loaded from final location 2021-05-15T22:45:08.9381739Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:45:08.9390661Z * DONE (fansi) 2021-05-15T22:45:09.3979692Z * installing *source* package ‘diffobj’ ... 2021-05-15T22:45:09.4092409Z ** package ‘diffobj’ successfully unpacked and MD5 sums checked 2021-05-15T22:45:09.4093840Z ** using staged installation 2021-05-15T22:45:09.4262058Z ** libs 2021-05-15T22:45:09.4321866Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diff.c -o diff.o 2021-05-15T22:45:09.6757793Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffobj.c -o diffobj.o 2021-05-15T22:45:09.7428331Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:45:09.7898803Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o diffobj.so diff.o diffobj.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:45:09.8187934Z installing to /home/runner/work/_temp/Library/00LOCK-diffobj/00new/diffobj/libs 2021-05-15T22:45:09.8189368Z ** R 2021-05-15T22:45:09.8607791Z ** inst 2021-05-15T22:45:09.8622287Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:45:16.0623124Z ** help 2021-05-15T22:45:16.2614081Z *** installing help indices 2021-05-15T22:45:16.3858065Z ** building package indices 2021-05-15T22:45:16.6786240Z ** installing vignettes 2021-05-15T22:45:16.6849787Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:45:16.9820992Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:45:17.0001430Z ** testing if installed package can be loaded from final location 2021-05-15T22:45:17.4352185Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:45:17.4430034Z * DONE (diffobj) 2021-05-15T22:45:17.7336479Z * installing *source* package ‘ps’ ... 2021-05-15T22:45:17.7370519Z ** package ‘ps’ successfully unpacked and MD5 sums checked 2021-05-15T22:45:17.7372548Z ** using staged installation 2021-05-15T22:45:17.9303231Z ** libs 2021-05-15T22:45:17.9358524Z gcc -g -O2 -Wall px.c -o px 2021-05-15T22:45:18.0600288Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:45:18.1269016Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-common.c -o api-common.o 2021-05-15T22:45:18.1856898Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c common.c -o common.o 2021-05-15T22:45:18.2479854Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c extra.c -o extra.o 2021-05-15T22:45:18.3955019Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dummy.c -o dummy.o 2021-05-15T22:45:18.4427327Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error-codes.c -o error-codes.o 2021-05-15T22:45:18.7082758Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c posix.c -o posix.o 2021-05-15T22:45:18.9115941Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-posix.c -o api-posix.o 2021-05-15T22:45:19.0087229Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c linux.c -o linux.o 2021-05-15T22:45:19.2634261Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-linux.c -o api-linux.o 2021-05-15T22:45:19.7442474Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o ps.so init.o api-common.o common.o extra.o dummy.o error-codes.o posix.o api-posix.o linux.o api-linux.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:45:19.7781504Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-ps/00new/ps 2021-05-15T22:45:19.7782803Z ** R 2021-05-15T22:45:19.7862779Z ** inst 2021-05-15T22:45:19.7872603Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:45:20.7845085Z ** help 2021-05-15T22:45:20.9116018Z *** installing help indices 2021-05-15T22:45:20.9904773Z ** building package indices 2021-05-15T22:45:21.2500940Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:45:21.4214291Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:45:21.4375109Z ** testing if installed package can be loaded from final location 2021-05-15T22:45:21.6200384Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:45:21.6216340Z * DONE (ps) 2021-05-15T22:45:21.8223409Z * installing *source* package ‘praise’ ... 2021-05-15T22:45:21.8234290Z ** package ‘praise’ successfully unpacked and MD5 sums checked 2021-05-15T22:45:21.8236251Z ** using staged installation 2021-05-15T22:45:21.8321476Z ** R 2021-05-15T22:45:21.8358054Z ** inst 2021-05-15T22:45:21.8367370Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:45:22.0469739Z ** help 2021-05-15T22:45:22.0594928Z *** installing help indices 2021-05-15T22:45:22.0804089Z ** building package indices 2021-05-15T22:45:22.2531225Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:45:22.4231339Z ** testing if installed package can be loaded from final location 2021-05-15T22:45:22.5931685Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:45:22.5936317Z * DONE (praise) 2021-05-15T22:45:22.9033636Z * installing *source* package ‘pkgload’ ... 2021-05-15T22:45:22.9077698Z ** package ‘pkgload’ successfully unpacked and MD5 sums checked 2021-05-15T22:45:22.9079673Z ** using staged installation 2021-05-15T22:45:22.9220940Z ** R 2021-05-15T22:45:22.9319151Z ** inst 2021-05-15T22:45:22.9325943Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:45:23.6987708Z ** help 2021-05-15T22:45:23.7472170Z *** installing help indices 2021-05-15T22:45:23.7879548Z ** building package indices 2021-05-15T22:45:24.0025115Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:45:24.4162519Z ** testing if installed package can be loaded from final location 2021-05-15T22:45:24.8387430Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:45:24.8390627Z * DONE (pkgload) 2021-05-15T22:45:25.0753582Z * installing *source* package ‘evaluate’ ... 2021-05-15T22:45:25.0766726Z ** package ‘evaluate’ successfully unpacked and MD5 sums checked 2021-05-15T22:45:25.0768662Z ** using staged installation 2021-05-15T22:45:25.0905502Z ** R 2021-05-15T22:45:25.0948519Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:45:25.5364676Z ** help 2021-05-15T22:45:25.5624797Z *** installing help indices 2021-05-15T22:45:25.5910354Z ** building package indices 2021-05-15T22:45:25.7833535Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:45:25.9637944Z ** testing if installed package can be loaded from final location 2021-05-15T22:45:26.1381569Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:45:26.1389522Z * DONE (evaluate) 2021-05-15T22:45:26.3294874Z * installing *source* package ‘ellipsis’ ... 2021-05-15T22:45:26.3303021Z ** package ‘ellipsis’ successfully unpacked and MD5 sums checked 2021-05-15T22:45:26.3305675Z ** using staged installation 2021-05-15T22:45:26.3435188Z ** libs 2021-05-15T22:45:26.3478419Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dots.c -o dots.o 2021-05-15T22:45:26.4354699Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:45:26.4790509Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o ellipsis.so dots.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:45:26.5001988Z installing to /home/runner/work/_temp/Library/00LOCK-ellipsis/00new/ellipsis/libs 2021-05-15T22:45:26.5016456Z ** R 2021-05-15T22:45:26.5042710Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:45:26.7535945Z ** help 2021-05-15T22:45:26.7756867Z *** installing help indices 2021-05-15T22:45:26.7928728Z ** building package indices 2021-05-15T22:45:26.9882892Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:45:27.2217379Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:45:27.2408426Z ** testing if installed package can be loaded from final location 2021-05-15T22:45:27.4318615Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:45:27.4323440Z * DONE (ellipsis) 2021-05-15T22:45:27.6925305Z * installing *source* package ‘digest’ ... 2021-05-15T22:45:27.6955636Z ** package ‘digest’ successfully unpacked and MD5 sums checked 2021-05-15T22:45:27.6957044Z ** using staged installation 2021-05-15T22:45:27.7064915Z ** libs 2021-05-15T22:45:27.7146455Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c SpookyV2.cpp -o SpookyV2.o 2021-05-15T22:45:27.9045443Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o 2021-05-15T22:45:28.2291164Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3.c -o blake3.o 2021-05-15T22:45:29.0705518Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3_dispatch.c -o blake3_dispatch.o 2021-05-15T22:45:29.2983897Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3_portable.c -o blake3_portable.o 2021-05-15T22:45:29.7951644Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c crc32.c -o crc32.o 2021-05-15T22:45:29.8663012Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest.c -o digest.o 2021-05-15T22:45:30.0803249Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest2int.c -o digest2int.o 2021-05-15T22:45:30.1394088Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:45:30.1603065Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c md5.c -o md5.o 2021-05-15T22:45:30.2914414Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pmurhash.c -o pmurhash.o 2021-05-15T22:45:30.3420973Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c raes.c -o raes.o 2021-05-15T22:45:30.4105992Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha1.c -o sha1.o 2021-05-15T22:45:30.6832418Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha2.c -o sha2.o 2021-05-15T22:45:30.7891206Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha256.c -o sha256.o 2021-05-15T22:45:31.3152978Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c spooky_serialize.cpp -o spooky_serialize.o 2021-05-15T22:45:31.4244426Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c xxhash.c -o xxhash.o 2021-05-15T22:45:31.6513370Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o digest.so SpookyV2.o aes.o blake3.o blake3_dispatch.o blake3_portable.o crc32.o digest.o digest2int.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o spooky_serialize.o xxhash.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:45:31.6900936Z installing to /home/runner/work/_temp/Library/00LOCK-digest/00new/digest/libs 2021-05-15T22:45:31.6917162Z ** R 2021-05-15T22:45:31.6975256Z ** demo 2021-05-15T22:45:31.6982249Z ** inst 2021-05-15T22:45:31.7000387Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:45:32.1796821Z ** help 2021-05-15T22:45:32.2144759Z *** installing help indices 2021-05-15T22:45:32.2386993Z ** building package indices 2021-05-15T22:45:32.4307130Z ** installing vignettes 2021-05-15T22:45:32.4340783Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:45:32.5996372Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:45:32.6164488Z ** testing if installed package can be loaded from final location 2021-05-15T22:45:32.7839058Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:45:32.7854280Z * DONE (digest) 2021-05-15T22:45:33.0009629Z * installing *source* package ‘brio’ ... 2021-05-15T22:45:33.0022556Z ** package ‘brio’ successfully unpacked and MD5 sums checked 2021-05-15T22:45:33.0024580Z ** using staged installation 2021-05-15T22:45:33.0199886Z ** libs 2021-05-15T22:45:33.0269312Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c brio.c -o brio.o 2021-05-15T22:45:33.0673074Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c file_line_endings.c -o file_line_endings.o 2021-05-15T22:45:33.1345206Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:45:33.1752568Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_file.c -o read_file.o 2021-05-15T22:45:33.2222478Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_file_raw.c -o read_file_raw.o 2021-05-15T22:45:33.2749055Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_lines.c -o read_lines.o 2021-05-15T22:45:33.3523214Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write_file.c -o write_file.o 2021-05-15T22:45:33.3958734Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write_lines.c -o write_lines.o 2021-05-15T22:45:33.4535373Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o brio.so brio.o file_line_endings.o init.o read_file.o read_file_raw.o read_lines.o write_file.o write_lines.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:45:33.4789728Z installing to /home/runner/work/_temp/Library/00LOCK-brio/00new/brio/libs 2021-05-15T22:45:33.4791783Z ** R 2021-05-15T22:45:33.4816024Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:45:33.7074514Z ** help 2021-05-15T22:45:33.7252688Z *** installing help indices 2021-05-15T22:45:33.7433260Z ** building package indices 2021-05-15T22:45:33.9274166Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:45:34.1034046Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:45:34.1198044Z ** testing if installed package can be loaded from final location 2021-05-15T22:45:34.2788263Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:45:34.2796520Z * DONE (brio) 2021-05-15T22:45:34.5474055Z * installing *source* package ‘xml2’ ... 2021-05-15T22:45:34.5510879Z ** package ‘xml2’ successfully unpacked and MD5 sums checked 2021-05-15T22:45:34.5512328Z ** using staged installation 2021-05-15T22:45:34.5838385Z Found pkg-config cflags and libs! 2021-05-15T22:45:34.6645779Z Using PKG_CFLAGS=-I/usr/include/libxml2 2021-05-15T22:45:34.6647343Z Using PKG_LIBS=-lxml2 2021-05-15T22:45:35.0333669Z ** libs 2021-05-15T22:45:35.0384983Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c connection.cpp -o connection.o 2021-05-15T22:45:35.4870916Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:45:35.5288480Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_doc.cpp -o xml2_doc.o 2021-05-15T22:45:36.0452359Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_init.cpp -o xml2_init.o 2021-05-15T22:45:36.4564619Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_namespace.cpp -o xml2_namespace.o 2021-05-15T22:45:37.0896665Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_node.cpp -o xml2_node.o 2021-05-15T22:45:38.9575161Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_output.cpp -o xml2_output.o 2021-05-15T22:45:39.4787047Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_schema.cpp -o xml2_schema.o 2021-05-15T22:45:40.0642784Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_url.cpp -o xml2_url.o 2021-05-15T22:45:40.4964889Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_xpath.cpp -o xml2_xpath.o 2021-05-15T22:45:40.9239738Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o xml2.so connection.o init.o xml2_doc.o xml2_init.o xml2_namespace.o xml2_node.o xml2_output.o xml2_schema.o xml2_url.o xml2_xpath.o -lxml2 -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:45:41.0037560Z installing to /home/runner/work/_temp/Library/00LOCK-xml2/00new/xml2/libs 2021-05-15T22:45:41.0065743Z ** R 2021-05-15T22:45:41.0169073Z ** inst 2021-05-15T22:45:41.0179896Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:45:41.8063903Z ** help 2021-05-15T22:45:41.8940374Z *** installing help indices 2021-05-15T22:45:41.9385761Z ** building package indices 2021-05-15T22:45:42.1683660Z ** installing vignettes 2021-05-15T22:45:42.1793428Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:45:42.3513140Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:45:42.3710590Z ** testing if installed package can be loaded from final location 2021-05-15T22:45:42.5558732Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:45:42.5572863Z * DONE (xml2) 2021-05-15T22:45:42.8438640Z * installing *source* package ‘xfun’ ... 2021-05-15T22:45:42.8475994Z ** package ‘xfun’ successfully unpacked and MD5 sums checked 2021-05-15T22:45:42.8477991Z ** using staged installation 2021-05-15T22:45:42.8639543Z ** libs 2021-05-15T22:45:42.8736454Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-15T22:45:42.9777771Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:45:43.0300866Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o xfun.so base64.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:45:43.0674398Z installing to /home/runner/work/_temp/Library/00LOCK-xfun/00new/xfun/libs 2021-05-15T22:45:43.0686581Z ** R 2021-05-15T22:45:43.0837137Z ** inst 2021-05-15T22:45:43.0849093Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:45:44.4287750Z ** help 2021-05-15T22:45:44.5640114Z *** installing help indices 2021-05-15T22:45:44.6550368Z ** building package indices 2021-05-15T22:45:44.9338431Z ** installing vignettes 2021-05-15T22:45:44.9403798Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:45:45.1196958Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:45:45.1383418Z ** testing if installed package can be loaded from final location 2021-05-15T22:45:45.3405817Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:45:45.3420903Z * DONE (xfun) 2021-05-15T22:45:47.7247726Z * installing *source* package ‘stringi’ ... 2021-05-15T22:45:47.8401512Z ** package ‘stringi’ successfully unpacked and MD5 sums checked 2021-05-15T22:45:47.8402941Z ** using staged installation 2021-05-15T22:45:47.9648071Z checking for R_HOME... /opt/R/devel/lib/R 2021-05-15T22:45:47.9649075Z checking for R... /opt/R/devel/lib/R/bin/R 2021-05-15T22:45:48.1231304Z checking for endianness... little 2021-05-15T22:45:48.2767496Z checking for R >= 3.1.0 for C++11 use... yes 2021-05-15T22:45:48.4267419Z checking for R < 3.4.0 for CXX1X flag use... no 2021-05-15T22:45:48.4271675Z checking for cat... /usr/bin/cat 2021-05-15T22:45:48.6580687Z checking for local ICUDT_DIR... icu69/data 2021-05-15T22:45:48.6581801Z checking for gcc... gcc 2021-05-15T22:45:48.7173040Z checking whether the C compiler works... yes 2021-05-15T22:45:48.7183785Z checking for C compiler default output file name... a.out 2021-05-15T22:45:48.7540992Z checking for suffix of executables... 2021-05-15T22:45:48.8044941Z checking whether we are cross compiling... no 2021-05-15T22:45:48.8284402Z checking for suffix of object files... o 2021-05-15T22:45:48.8485162Z checking whether we are using the GNU C compiler... yes 2021-05-15T22:45:48.8676425Z checking whether gcc accepts -g... yes 2021-05-15T22:45:48.9013452Z checking for gcc option to accept ISO C89... none needed 2021-05-15T22:45:48.9218923Z checking how to run the C preprocessor... gcc -E 2021-05-15T22:45:48.9439569Z checking for grep that handles long lines and -e... /usr/bin/grep 2021-05-15T22:45:48.9454278Z checking for egrep... /usr/bin/grep -E 2021-05-15T22:45:49.0458297Z checking for ANSI C header files... yes 2021-05-15T22:45:49.0726734Z checking for sys/types.h... yes 2021-05-15T22:45:49.1044889Z checking for sys/stat.h... yes 2021-05-15T22:45:49.1382833Z checking for stdlib.h... yes 2021-05-15T22:45:49.1745510Z checking for string.h... yes 2021-05-15T22:45:49.2086597Z checking for memory.h... yes 2021-05-15T22:45:49.2454677Z checking for strings.h... yes 2021-05-15T22:45:49.2813569Z checking for inttypes.h... yes 2021-05-15T22:45:49.3219995Z checking for stdint.h... yes 2021-05-15T22:45:49.3603683Z checking for unistd.h... yes 2021-05-15T22:45:49.4236553Z checking elf.h usability... yes 2021-05-15T22:45:49.4342127Z checking elf.h presence... yes 2021-05-15T22:45:49.4342913Z checking for elf.h... yes 2021-05-15T22:45:49.5044125Z checking whether we are using the GNU C++ compiler... yes 2021-05-15T22:45:49.5271640Z checking whether g++ -std=gnu++11 accepts -g... yes 2021-05-15T22:45:49.8686278Z checking whether the C++ compiler supports the long long type... yes 2021-05-15T22:45:49.8990304Z checking whether the compiler implements namespaces... yes 2021-05-15T22:45:50.0483547Z checking whether the compiler supports Standard Template Library... yes 2021-05-15T22:45:50.6137973Z checking whether std::map is available... yes 2021-05-15T22:45:50.6163391Z checking for pkg-config... /usr/bin/pkg-config 2021-05-15T22:45:50.6316851Z checking with pkg-config for the system ICU4C... 66.1 2021-05-15T22:45:50.6343143Z checking for ICU4C >= 55... yes 2021-05-15T22:45:50.6415912Z checking for additional required CPPFLAGS, LDFLAGS, and LIBS... done 2021-05-15T22:45:51.1071279Z checking whether an ICU4C-based project can be built... yes 2021-05-15T22:45:51.1667203Z checking programmatically for sufficient U_ICU_VERSION_MAJOR_NUM... yes 2021-05-15T22:45:51.4366965Z checking programmatically if U_CHARSET_IS_UTF8 is defined and set... yes 2021-05-15T22:45:52.4351425Z checking the capabilities of the ICU data library (ucnv, uloc, utrans)... yes 2021-05-15T22:45:53.0350824Z checking the capabilities of the ICU data library (ucol)... yes 2021-05-15T22:45:53.0737893Z configure: creating ./config.status 2021-05-15T22:45:53.1563780Z config.status: creating src/Makevars 2021-05-15T22:45:53.1753882Z config.status: creating src/uconfig_local.h 2021-05-15T22:45:53.1928784Z config.status: creating src/install.libs.R 2021-05-15T22:45:53.2103109Z 2021-05-15T22:45:53.2103990Z *** stringi configure summary: 2021-05-15T22:45:53.2104612Z ICU_FOUND=1 2021-05-15T22:45:53.2105240Z STRINGI_CXXSTD=CXX_STD=CXX11 2021-05-15T22:45:53.2106659Z STRINGI_CFLAGS= -fpic 2021-05-15T22:45:53.2107678Z STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H 2021-05-15T22:45:53.2108603Z STRINGI_CXXFLAGS= -fpic 2021-05-15T22:45:53.2110103Z STRINGI_LDFLAGS=-L/usr/lib/x86_64-linux-gnu 2021-05-15T22:45:53.2111886Z STRINGI_LIBS=-licui18n -licuuc -licudata 2021-05-15T22:45:53.2112327Z 2021-05-15T22:45:53.2112874Z *** Compiler settings used: 2021-05-15T22:45:53.2113373Z CC=gcc 2021-05-15T22:45:53.2113986Z LD=g++ -std=gnu++14 2021-05-15T22:45:53.2114622Z CFLAGS=-g -O2 -fpic 2021-05-15T22:45:53.2115489Z CPPFLAGS=-I/usr/local/include -UDEBUG -DNDEBUG 2021-05-15T22:45:53.2116244Z CXX=g++ -std=gnu++11 2021-05-15T22:45:53.2116918Z CXXFLAGS=-g -O2 -fpic 2021-05-15T22:45:53.2117395Z LDFLAGS= 2021-05-15T22:45:53.2117816Z LIBS= 2021-05-15T22:45:53.2118084Z 2021-05-15T22:45:53.2455191Z ** libs 2021-05-15T22:45:53.2540340Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_brkiter.cpp -o stri_brkiter.o 2021-05-15T22:45:53.9382146Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_collator.cpp -o stri_collator.o 2021-05-15T22:45:54.5591814Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_common.cpp -o stri_common.o 2021-05-15T22:45:55.1968960Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_compare.cpp -o stri_compare.o 2021-05-15T22:45:55.8832575Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_base.cpp -o stri_container_base.o 2021-05-15T22:45:56.4379224Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o 2021-05-15T22:45:57.3734951Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listint.cpp -o stri_container_listint.o 2021-05-15T22:45:57.9864606Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listraw.cpp -o stri_container_listraw.o 2021-05-15T22:45:58.6374247Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listutf8.cpp -o stri_container_listutf8.o 2021-05-15T22:45:59.2476807Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_regex.cpp -o stri_container_regex.o 2021-05-15T22:45:59.9398584Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_usearch.cpp -o stri_container_usearch.o 2021-05-15T22:46:00.6089809Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf16.cpp -o stri_container_utf16.o 2021-05-15T22:46:01.3761309Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8.cpp -o stri_container_utf8.o 2021-05-15T22:46:02.0765388Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o 2021-05-15T22:46:02.7456321Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o 2021-05-15T22:46:03.7768991Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_detection.cpp -o stri_encoding_detection.o 2021-05-15T22:46:05.3155124Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_management.cpp -o stri_encoding_management.o 2021-05-15T22:46:05.9695324Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_escape.cpp -o stri_escape.o 2021-05-15T22:46:06.6137477Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_exception.cpp -o stri_exception.o 2021-05-15T22:46:07.1242331Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ICU_settings.cpp -o stri_ICU_settings.o 2021-05-15T22:46:07.6413295Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_join.cpp -o stri_join.o 2021-05-15T22:46:08.5645684Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_length.cpp -o stri_length.o 2021-05-15T22:46:09.2029389Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_pad.cpp -o stri_pad.o 2021-05-15T22:46:09.8404877Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_prepare_arg.cpp -o stri_prepare_arg.o 2021-05-15T22:46:10.6140086Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_random.cpp -o stri_random.o 2021-05-15T22:46:11.3698634Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_reverse.cpp -o stri_reverse.o 2021-05-15T22:46:11.9275209Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_count.cpp -o stri_search_class_count.o 2021-05-15T22:46:12.5765008Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_detect.cpp -o stri_search_class_detect.o 2021-05-15T22:46:13.1731828Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_extract.cpp -o stri_search_class_extract.o 2021-05-15T22:46:13.9554049Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_locate.cpp -o stri_search_class_locate.o 2021-05-15T22:46:14.8066566Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_replace.cpp -o stri_search_class_replace.o 2021-05-15T22:46:15.7536447Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_split.cpp -o stri_search_class_split.o 2021-05-15T22:46:16.5128209Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o 2021-05-15T22:46:17.1922277Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_subset.cpp -o stri_search_class_subset.o 2021-05-15T22:46:17.9312231Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_trim.cpp -o stri_search_class_trim.o 2021-05-15T22:46:18.5552650Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_common.cpp -o stri_search_common.o 2021-05-15T22:46:19.1421798Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_count.cpp -o stri_search_coll_count.o 2021-05-15T22:46:19.7798924Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o 2021-05-15T22:46:20.4240193Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o 2021-05-15T22:46:21.2076331Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o 2021-05-15T22:46:21.9546741Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o 2021-05-15T22:46:22.7635132Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_split.cpp -o stri_search_coll_split.o 2021-05-15T22:46:23.5477260Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o 2021-05-15T22:46:24.2223475Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o 2021-05-15T22:46:24.9102660Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o 2021-05-15T22:46:25.4342411Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o 2021-05-15T22:46:26.0921755Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o 2021-05-15T22:46:26.7425655Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o 2021-05-15T22:46:27.4073515Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o 2021-05-15T22:46:27.9627925Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o 2021-05-15T22:46:28.5084295Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o 2021-05-15T22:46:29.2157297Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o 2021-05-15T22:46:29.9450144Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o 2021-05-15T22:46:30.7970244Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o 2021-05-15T22:46:31.5157521Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o 2021-05-15T22:46:32.2026493Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o 2021-05-15T22:46:32.8197278Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_in.cpp -o stri_search_in.o 2021-05-15T22:46:32.8343321Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_other_split.cpp -o stri_search_other_split.o 2021-05-15T22:46:33.6223579Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_count.cpp -o stri_search_regex_count.o 2021-05-15T22:46:34.1539183Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o 2021-05-15T22:46:34.6947412Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o 2021-05-15T22:46:35.4080779Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o 2021-05-15T22:46:36.1520364Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_match.cpp -o stri_search_regex_match.o 2021-05-15T22:46:36.9977706Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o 2021-05-15T22:46:37.6208242Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_split.cpp -o stri_search_regex_split.o 2021-05-15T22:46:38.3624749Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o 2021-05-15T22:46:39.0318971Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sort.cpp -o stri_sort.o 2021-05-15T22:46:40.6145201Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stats.cpp -o stri_stats.o 2021-05-15T22:46:41.2278046Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stringi.cpp -o stri_stringi.o 2021-05-15T22:46:41.7588100Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sub.cpp -o stri_sub.o 2021-05-15T22:46:42.5070608Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_test.cpp -o stri_test.o 2021-05-15T22:46:43.0182793Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_zone.cpp -o stri_time_zone.o 2021-05-15T22:46:43.6489368Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_calendar.cpp -o stri_time_calendar.o 2021-05-15T22:46:44.4998797Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_symbols.cpp -o stri_time_symbols.o 2021-05-15T22:46:45.3206669Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_format.cpp -o stri_time_format.o 2021-05-15T22:46:46.1955411Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_casemap.cpp -o stri_trans_casemap.o 2021-05-15T22:46:46.8583121Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_other.cpp -o stri_trans_other.o 2021-05-15T22:46:47.5821866Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_normalization.cpp -o stri_trans_normalization.o 2021-05-15T22:46:48.2014757Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o 2021-05-15T22:46:48.7913206Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ucnv.cpp -o stri_ucnv.o 2021-05-15T22:46:49.4372110Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_uloc.cpp -o stri_uloc.o 2021-05-15T22:46:49.9654997Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_utils.cpp -o stri_utils.o 2021-05-15T22:46:50.5465698Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_wrap.cpp -o stri_wrap.o 2021-05-15T22:46:52.0019811Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o stringi.so stri_brkiter.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_stats.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:46:52.2273962Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-stringi/00new/stringi 2021-05-15T22:46:52.3070078Z ** R 2021-05-15T22:46:52.3343557Z ** inst 2021-05-15T22:46:52.3352096Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:46:53.5082012Z ** help 2021-05-15T22:46:54.3362234Z *** installing help indices 2021-05-15T22:46:54.3371376Z ** building package indices 2021-05-15T22:46:54.6094178Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:46:54.8125045Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:46:54.8358088Z ** testing if installed package can be loaded from final location 2021-05-15T22:46:55.0604795Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:46:55.0617190Z * DONE (stringi) 2021-05-15T22:46:56.0879925Z * installing *source* package ‘Rcpp’ ... 2021-05-15T22:46:56.1258412Z ** package ‘Rcpp’ successfully unpacked and MD5 sums checked 2021-05-15T22:46:56.1259816Z ** using staged installation 2021-05-15T22:46:56.1384522Z ** libs 2021-05-15T22:46:56.1436026Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c api.cpp -o api.o 2021-05-15T22:46:59.5449618Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c attributes.cpp -o attributes.o 2021-05-15T22:47:15.2978839Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c barrier.cpp -o barrier.o 2021-05-15T22:47:15.4866551Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c date.cpp -o date.o 2021-05-15T22:47:18.6426822Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c module.cpp -o module.o 2021-05-15T22:47:24.5259184Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c rcpp_init.cpp -o rcpp_init.o 2021-05-15T22:47:27.4187601Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o Rcpp.so api.o attributes.o barrier.o date.o module.o rcpp_init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:47:27.5888999Z installing to /home/runner/work/_temp/Library/00LOCK-Rcpp/00new/Rcpp/libs 2021-05-15T22:47:27.5996936Z ** R 2021-05-15T22:47:27.6137988Z ** inst 2021-05-15T22:47:27.6549532Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:47:29.3051744Z ** help 2021-05-15T22:47:29.3967856Z *** installing help indices 2021-05-15T22:47:29.4543338Z ** building package indices 2021-05-15T22:47:29.7027316Z ** installing vignettes 2021-05-15T22:47:29.7066116Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:47:29.9773569Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:47:30.0012898Z ** testing if installed package can be loaded from final location 2021-05-15T22:47:30.2879959Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:47:30.2960933Z * DONE (Rcpp) 2021-05-15T22:47:30.5828724Z * installing *source* package ‘commonmark’ ... 2021-05-15T22:47:30.5867241Z ** package ‘commonmark’ successfully unpacked and MD5 sums checked 2021-05-15T22:47:30.5868145Z ** using staged installation 2021-05-15T22:47:30.5973782Z ** libs 2021-05-15T22:47:30.6027960Z rm -f cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o extensions.o init.o wrapper.o commonmark.so cmark/libstatcmark.a 2021-05-15T22:47:30.6065984Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions.c -o extensions.o 2021-05-15T22:47:30.6568436Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:47:30.6973829Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c wrapper.c -o wrapper.o 2021-05-15T22:47:30.7587701Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/cmark.c -o cmark/cmark.o 2021-05-15T22:47:30.8058125Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/node.c -o cmark/node.o 2021-05-15T22:47:31.0845372Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/iterator.c -o cmark/iterator.o 2021-05-15T22:47:31.1726557Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/blocks.c -o cmark/blocks.o 2021-05-15T22:47:31.6035976Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/inlines.c -o cmark/inlines.o 2021-05-15T22:47:32.2933396Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/scanners.c -o cmark/scanners.o 2021-05-15T22:47:33.9627785Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/utf8.c -o cmark/utf8.o 2021-05-15T22:47:36.8628705Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/buffer.c -o cmark/buffer.o 2021-05-15T22:47:36.9829364Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/references.c -o cmark/references.o 2021-05-15T22:47:37.0351208Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/render.c -o cmark/render.o 2021-05-15T22:47:37.1514139Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/man.c -o cmark/man.o 2021-05-15T22:47:37.2358205Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/xml.c -o cmark/xml.o 2021-05-15T22:47:37.3261501Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/html.c -o cmark/html.o 2021-05-15T22:47:37.5223732Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/commonmark.c -o cmark/commonmark.o 2021-05-15T22:47:37.7118102Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/latex.c -o cmark/latex.o 2021-05-15T22:47:37.8289338Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_href_e.c -o cmark/houdini_href_e.o 2021-05-15T22:47:37.8693285Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_html_e.c -o cmark/houdini_html_e.o 2021-05-15T22:47:37.9127041Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_html_u.c -o cmark/houdini_html_u.o 2021-05-15T22:47:38.0141017Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/cmark_ctype.c -o cmark/cmark_ctype.o 2021-05-15T22:47:38.0388890Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/arena.c -o cmark/arena.o 2021-05-15T22:47:38.1012157Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/linked_list.c -o cmark/linked_list.o 2021-05-15T22:47:38.1412767Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/plugin.c -o cmark/plugin.o 2021-05-15T22:47:38.1775972Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/registry.c -o cmark/registry.o 2021-05-15T22:47:38.2234579Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/syntax_extension.c -o cmark/syntax_extension.o 2021-05-15T22:47:38.2943339Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/plaintext.c -o cmark/plaintext.o 2021-05-15T22:47:38.3870211Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/footnotes.c -o cmark/footnotes.o 2021-05-15T22:47:38.4337706Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/map.c -o cmark/map.o 2021-05-15T22:47:38.5052985Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/autolink.c -o extensions/autolink.o 2021-05-15T22:47:38.6612515Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/core-extensions.c -o extensions/core-extensions.o 2021-05-15T22:47:38.6909727Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/ext_scanners.c -o extensions/ext_scanners.o 2021-05-15T22:47:38.8330902Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/strikethrough.c -o extensions/strikethrough.o 2021-05-15T22:47:38.9227096Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/table.c -o extensions/table.o 2021-05-15T22:47:39.2003226Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/tagfilter.c -o extensions/tagfilter.o 2021-05-15T22:47:39.2509704Z ar rcs cmark/libstatcmark.a cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o 2021-05-15T22:47:39.2635531Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o commonmark.so extensions.o init.o wrapper.o -Lcmark -lstatcmark -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:47:39.3044132Z installing to /home/runner/work/_temp/Library/00LOCK-commonmark/00new/commonmark/libs 2021-05-15T22:47:39.3102210Z ** R 2021-05-15T22:47:39.3127632Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:47:39.5489227Z ** help 2021-05-15T22:47:39.5618557Z *** installing help indices 2021-05-15T22:47:39.5797875Z ** building package indices 2021-05-15T22:47:39.7599090Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:47:39.9214771Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:47:39.9393666Z ** testing if installed package can be loaded from final location 2021-05-15T22:47:40.1109250Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:47:40.1119120Z * DONE (commonmark) 2021-05-15T22:47:40.3347204Z * installing *source* package ‘brew’ ... 2021-05-15T22:47:40.3349315Z ** using staged installation 2021-05-15T22:47:40.3420255Z ** R 2021-05-15T22:47:40.3442479Z ** inst 2021-05-15T22:47:40.3463560Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:47:40.6666956Z ** help 2021-05-15T22:47:40.6787577Z *** installing help indices 2021-05-15T22:47:40.6955081Z ** building package indices 2021-05-15T22:47:40.8757167Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:47:41.0371669Z ** testing if installed package can be loaded from final location 2021-05-15T22:47:41.1976947Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:47:41.1984514Z * DONE (brew) 2021-05-15T22:47:41.4071652Z * installing *source* package ‘sessioninfo’ ... 2021-05-15T22:47:41.4086130Z ** package ‘sessioninfo’ successfully unpacked and MD5 sums checked 2021-05-15T22:47:41.4088065Z ** using staged installation 2021-05-15T22:47:41.4229065Z ** R 2021-05-15T22:47:41.4263701Z ** inst 2021-05-15T22:47:41.4277010Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:47:41.8070003Z ** help 2021-05-15T22:47:41.8225078Z *** installing help indices 2021-05-15T22:47:41.8384713Z ** building package indices 2021-05-15T22:47:42.0189954Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:47:42.2323728Z ** testing if installed package can be loaded from final location 2021-05-15T22:47:42.4319488Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:47:42.4324791Z * DONE (sessioninfo) 2021-05-15T22:47:42.6220808Z * installing *source* package ‘prettyunits’ ... 2021-05-15T22:47:42.6229597Z ** package ‘prettyunits’ successfully unpacked and MD5 sums checked 2021-05-15T22:47:42.6231602Z ** using staged installation 2021-05-15T22:47:42.6329368Z ** R 2021-05-15T22:47:42.6370945Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:47:42.9267013Z ** help 2021-05-15T22:47:42.9499544Z *** installing help indices 2021-05-15T22:47:42.9703119Z ** building package indices 2021-05-15T22:47:43.1712153Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:47:43.3240250Z ** testing if installed package can be loaded from final location 2021-05-15T22:47:43.4842165Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:47:43.4847432Z * DONE (prettyunits) 2021-05-15T22:47:43.9526085Z * installing *source* package ‘vctrs’ ... 2021-05-15T22:47:43.9665634Z ** package ‘vctrs’ successfully unpacked and MD5 sums checked 2021-05-15T22:47:43.9667152Z ** using staged installation 2021-05-15T22:47:43.9831605Z ** libs 2021-05-15T22:47:43.9899070Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c altrep-rle.c -o altrep-rle.o 2021-05-15T22:47:44.0980819Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c arg-counter.c -o arg-counter.o 2021-05-15T22:47:44.1752606Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c arg.c -o arg.o 2021-05-15T22:47:44.2549790Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c bind.c -o bind.o 2021-05-15T22:47:45.3520520Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c c-unchop.c -o c-unchop.o 2021-05-15T22:47:45.3524933Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c c.c -o c.o 2021-05-15T22:47:45.3528365Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c callables.c -o callables.o 2021-05-15T22:47:45.3531866Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast-bare.c -o cast-bare.o 2021-05-15T22:47:45.3535524Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast-dispatch.c -o cast-dispatch.o 2021-05-15T22:47:45.3538747Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast.c -o cast.o 2021-05-15T22:47:45.3540634Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c compare.c -o compare.o 2021-05-15T22:47:45.3542370Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c complete.c -o complete.o 2021-05-15T22:47:45.3711154Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c conditions.c -o conditions.o 2021-05-15T22:47:45.4515749Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dictionary.c -o dictionary.o 2021-05-15T22:47:45.6823313Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dim.c -o dim.o 2021-05-15T22:47:45.7428839Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c equal.c -o equal.o 2021-05-15T22:47:46.1156211Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fields.c -o fields.o 2021-05-15T22:47:46.2018716Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fill.c -o fill.o 2021-05-15T22:47:46.3197097Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c group.c -o group.o 2021-05-15T22:47:46.4321413Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c growable.c -o growable.o 2021-05-15T22:47:46.4837943Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hash.c -o hash.o 2021-05-15T22:47:46.6987677Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:47:46.7564047Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c names.c -o names.o 2021-05-15T22:47:47.0463027Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-groups.c -o order-groups.o 2021-05-15T22:47:47.1328919Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-radix.c -o order-radix.o 2021-05-15T22:47:47.8317074Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-sortedness.c -o order-sortedness.o 2021-05-15T22:47:47.9685631Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-transform.c -o order-transform.o 2021-05-15T22:47:48.0355627Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-truelength.c -o order-truelength.o 2021-05-15T22:47:48.1071251Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c poly-op.c -o poly-op.o 2021-05-15T22:47:48.2769800Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c proxy-restore.c -o proxy-restore.o 2021-05-15T22:47:48.3931788Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c proxy.c -o proxy.o 2021-05-15T22:47:48.5197378Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ptype2-dispatch.c -o ptype2-dispatch.o 2021-05-15T22:47:48.6309210Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rep.c -o rep.o 2021-05-15T22:47:48.7712356Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c runs.c -o runs.o 2021-05-15T22:47:49.0200533Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c shape.c -o shape.o 2021-05-15T22:47:49.1223648Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size-common.c -o size-common.o 2021-05-15T22:47:49.2081366Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size.c -o size.o 2021-05-15T22:47:49.3255496Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-array.c -o slice-array.o 2021-05-15T22:47:49.7705267Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-assign-array.c -o slice-assign-array.o 2021-05-15T22:47:50.1172678Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-assign.c -o slice-assign.o 2021-05-15T22:47:50.3654872Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-chop.c -o slice-chop.o 2021-05-15T22:47:50.5343622Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice.c -o slice.o 2021-05-15T22:47:50.7994566Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c split.c -o split.o 2021-05-15T22:47:50.8547804Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c subscript-loc.c -o subscript-loc.o 2021-05-15T22:47:51.0428804Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c subscript.c -o subscript.o 2021-05-15T22:47:51.1958241Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c translate.c -o translate.o 2021-05-15T22:47:51.3007809Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-data-frame.c -o type-data-frame.o 2021-05-15T22:47:51.6369366Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-date-time.c -o type-date-time.o 2021-05-15T22:47:51.7797116Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-factor.c -o type-factor.o 2021-05-15T22:47:51.9060375Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-info.c -o type-info.o 2021-05-15T22:47:52.0044170Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-tibble.c -o type-tibble.o 2021-05-15T22:47:52.0766388Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type.c -o type.o 2021-05-15T22:47:52.1985646Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type2.c -o type2.o 2021-05-15T22:47:52.3190558Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typeof2-s3.c -o typeof2-s3.o 2021-05-15T22:47:52.4342394Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typeof2.c -o typeof2.o 2021-05-15T22:47:52.5321837Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c unspecified.c -o unspecified.o 2021-05-15T22:47:52.6075827Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils-dispatch.c -o utils-dispatch.o 2021-05-15T22:47:52.6808037Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils-rlang.c -o utils-rlang.o 2021-05-15T22:47:52.7306863Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-15T22:47:53.3733901Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-15T22:47:53.4174649Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o vctrs.so altrep-rle.o arg-counter.o arg.o bind.o c-unchop.o c.o callables.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o equal.o fields.o fill.o group.o growable.o hash.o init.o names.o order-groups.o order-radix.o order-sortedness.o order-transform.o order-truelength.o poly-op.o proxy-restore.o proxy.o ptype2-dispatch.o rep.o runs.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-tibble.o type.o type2.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils-rlang.o utils.o version.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:47:53.4747852Z installing to /home/runner/work/_temp/Library/00LOCK-vctrs/00new/vctrs/libs 2021-05-15T22:47:53.4776845Z ** R 2021-05-15T22:47:53.5137385Z ** inst 2021-05-15T22:47:53.5159473Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:47:55.9932579Z ** help 2021-05-15T22:47:56.2418572Z *** installing help indices 2021-05-15T22:47:56.4060609Z *** copying figures 2021-05-15T22:47:56.4070011Z ** building package indices 2021-05-15T22:47:56.7267147Z ** installing vignettes 2021-05-15T22:47:56.7420102Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:47:56.9741692Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:47:56.9965493Z ** testing if installed package can be loaded from final location 2021-05-15T22:47:57.3123625Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:47:57.3170034Z * DONE (vctrs) 2021-05-15T22:47:57.6162613Z * installing *source* package ‘processx’ ... 2021-05-15T22:47:57.6207595Z ** package ‘processx’ successfully unpacked and MD5 sums checked 2021-05-15T22:47:57.6210878Z ** using staged installation 2021-05-15T22:47:57.6406126Z ** libs 2021-05-15T22:47:57.6465380Z gcc -g -O2 -L/usr/local/lib -Wall tools/px.c -o tools/px 2021-05-15T22:47:57.7963656Z gcc -g -O2 -L/usr/local/lib supervisor/supervisor.c \ 2021-05-15T22:47:57.7965236Z supervisor/utils.c -o supervisor/supervisor 2021-05-15T22:47:57.9940918Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-15T22:47:58.0875336Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c client.c -o client.o 2021-05-15T22:47:58.1950731Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c errors.c -o errors.o 2021-05-15T22:47:58.2632367Z gcc -shared -L"/opt/R/devel/lib/R/lib" -L/usr/local/lib -o client.so base64.o client.o errors.o \ 2021-05-15T22:47:58.2633634Z -L"/opt/R/devel/lib/R/lib" -lR 2021-05-15T22:47:58.2930167Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:47:58.3759967Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c poll.c -o poll.o 2021-05-15T22:47:58.4904910Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c processx-connection.c -o processx-connection.o 2021-05-15T22:47:58.8676639Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c processx-vector.c -o processx-vector.o 2021-05-15T22:47:58.9648551Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c create-time.c -o create-time.o 2021-05-15T22:47:59.0867198Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/childlist.c -o unix/childlist.o 2021-05-15T22:47:59.1933684Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/connection.c -o unix/connection.o 2021-05-15T22:47:59.2697368Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/processx.c -o unix/processx.o 2021-05-15T22:47:59.5953945Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/sigchld.c -o unix/sigchld.o 2021-05-15T22:47:59.6980435Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/utils.c -o unix/utils.o 2021-05-15T22:47:59.8112024Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/named_pipe.c -o unix/named_pipe.o 2021-05-15T22:47:59.8723920Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cleancall.c -o cleancall.o 2021-05-15T22:47:59.9453032Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o processx.so init.o poll.o errors.o processx-connection.o processx-vector.o create-time.o base64.o unix/childlist.o unix/connection.o unix/processx.o unix/sigchld.o unix/utils.o unix/named_pipe.o cleancall.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:47:59.9748892Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-processx/00new/processx 2021-05-15T22:47:59.9782812Z ** R 2021-05-15T22:47:59.9920029Z ** inst 2021-05-15T22:47:59.9926417Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:48:01.6053619Z ** help 2021-05-15T22:48:01.6814172Z *** installing help indices 2021-05-15T22:48:01.7224225Z ** building package indices 2021-05-15T22:48:01.9589050Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:48:02.1558791Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:48:02.1832138Z ** testing if installed package can be loaded from final location 2021-05-15T22:48:02.4064571Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:48:02.4084067Z * DONE (processx) 2021-05-15T22:48:02.6648818Z * installing *source* package ‘markdown’ ... 2021-05-15T22:48:02.6677168Z ** package ‘markdown’ successfully unpacked and MD5 sums checked 2021-05-15T22:48:02.6681147Z ** using staged installation 2021-05-15T22:48:02.6835003Z ** libs 2021-05-15T22:48:02.6893127Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rbase64.c -o Rbase64.o 2021-05-15T22:48:02.7595777Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rinit.c -o Rinit.o 2021-05-15T22:48:02.8128475Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rmarkdown.c -o Rmarkdown.o 2021-05-15T22:48:02.9928550Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c autolink.c -o autolink.o 2021-05-15T22:48:03.1072346Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c buffer.c -o buffer.o 2021-05-15T22:48:03.1877262Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_href_e.c -o houdini_href_e.o 2021-05-15T22:48:03.2339773Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_html_e.c -o houdini_html_e.o 2021-05-15T22:48:03.2760906Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html.c -o html.o 2021-05-15T22:48:03.5004423Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html_smartypants.c -o html_smartypants.o 2021-05-15T22:48:03.6446201Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c markdown.c -o markdown.o 2021-05-15T22:48:04.8178799Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stack.c -o stack.o 2021-05-15T22:48:04.8704890Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o markdown.so Rbase64.o Rinit.o Rmarkdown.o autolink.o buffer.o houdini_href_e.o houdini_html_e.o html.o html_smartypants.o markdown.o stack.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:48:04.9059947Z installing to /home/runner/work/_temp/Library/00LOCK-markdown/00new/markdown/libs 2021-05-15T22:48:04.9076984Z ** R 2021-05-15T22:48:04.9140370Z ** inst 2021-05-15T22:48:04.9161429Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:48:05.3760315Z ** help 2021-05-15T22:48:05.4134566Z *** installing help indices 2021-05-15T22:48:05.4398672Z ** building package indices 2021-05-15T22:48:05.6440311Z ** installing vignettes 2021-05-15T22:48:05.6496870Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:48:05.8257041Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:48:05.8433610Z ** testing if installed package can be loaded from final location 2021-05-15T22:48:06.0232454Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:48:06.0248855Z * DONE (markdown) 2021-05-15T22:48:06.2391976Z * installing *source* package ‘highr’ ... 2021-05-15T22:48:06.2402381Z ** package ‘highr’ successfully unpacked and MD5 sums checked 2021-05-15T22:48:06.2403643Z ** using staged installation 2021-05-15T22:48:06.2551546Z ** R 2021-05-15T22:48:06.2584199Z ** inst 2021-05-15T22:48:06.2594118Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:48:06.5826908Z ** help 2021-05-15T22:48:06.5947003Z *** installing help indices 2021-05-15T22:48:06.6109450Z ** building package indices 2021-05-15T22:48:06.7998975Z ** installing vignettes 2021-05-15T22:48:06.8062256Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:48:06.9888860Z ** testing if installed package can be loaded from final location 2021-05-15T22:48:07.1718096Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:48:07.1725125Z * DONE (highr) 2021-05-15T22:48:07.4724710Z * installing *source* package ‘stringr’ ... 2021-05-15T22:48:07.4765190Z ** package ‘stringr’ successfully unpacked and MD5 sums checked 2021-05-15T22:48:07.4766611Z ** using staged installation 2021-05-15T22:48:07.4936666Z ** R 2021-05-15T22:48:07.5024785Z ** data 2021-05-15T22:48:07.5028617Z *** moving datasets to lazyload DB 2021-05-15T22:48:07.5211557Z ** inst 2021-05-15T22:48:07.5227655Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:48:08.0511234Z ** help 2021-05-15T22:48:08.1403001Z *** installing help indices 2021-05-15T22:48:08.1987794Z *** copying figures 2021-05-15T22:48:08.1989829Z ** building package indices 2021-05-15T22:48:08.4507515Z ** installing vignettes 2021-05-15T22:48:08.4546437Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:48:08.6627855Z ** testing if installed package can be loaded from final location 2021-05-15T22:48:08.8881468Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:48:08.8891213Z * DONE (stringr) 2021-05-15T22:48:09.1093868Z * installing *source* package ‘rversions’ ... 2021-05-15T22:48:09.1106349Z ** package ‘rversions’ successfully unpacked and MD5 sums checked 2021-05-15T22:48:09.1107849Z ** using staged installation 2021-05-15T22:48:09.1253394Z ** R 2021-05-15T22:48:09.1289352Z ** inst 2021-05-15T22:48:09.1297998Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:48:09.4467382Z ** help 2021-05-15T22:48:09.4635938Z *** installing help indices 2021-05-15T22:48:09.4830496Z *** copying figures 2021-05-15T22:48:09.4833198Z ** building package indices 2021-05-15T22:48:09.6693483Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:48:09.8540858Z ** testing if installed package can be loaded from final location 2021-05-15T22:48:10.0342481Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:48:10.0348477Z * DONE (rversions) 2021-05-15T22:48:10.4331693Z * installing *source* package ‘pillar’ ... 2021-05-15T22:48:10.4434725Z ** package ‘pillar’ successfully unpacked and MD5 sums checked 2021-05-15T22:48:10.4436946Z ** using staged installation 2021-05-15T22:48:10.4607964Z ** R 2021-05-15T22:48:10.4781852Z ** inst 2021-05-15T22:48:10.4812921Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:48:11.9558464Z ** help 2021-05-15T22:48:12.0308154Z *** installing help indices 2021-05-15T22:48:12.0889303Z *** copying figures 2021-05-15T22:48:12.0894254Z ** building package indices 2021-05-15T22:48:12.3087590Z ** installing vignettes 2021-05-15T22:48:12.3181440Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:48:12.5888037Z ** testing if installed package can be loaded from final location 2021-05-15T22:48:12.8793460Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:48:12.8817831Z * DONE (pillar) 2021-05-15T22:48:13.1365522Z * installing *source* package ‘callr’ ... 2021-05-15T22:48:13.1394876Z ** package ‘callr’ successfully unpacked and MD5 sums checked 2021-05-15T22:48:13.1396263Z ** using staged installation 2021-05-15T22:48:13.1521571Z ** R 2021-05-15T22:48:13.1640389Z ** inst 2021-05-15T22:48:13.1648556Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:48:15.9194888Z ** help 2021-05-15T22:48:16.0325734Z *** installing help indices 2021-05-15T22:48:16.0964416Z ** building package indices 2021-05-15T22:48:16.3290597Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:48:16.5094678Z ** testing if installed package can be loaded from final location 2021-05-15T22:48:16.7477318Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:48:16.7508167Z * DONE (callr) 2021-05-15T22:48:17.1665438Z * installing *source* package ‘knitr’ ... 2021-05-15T22:48:17.1767726Z ** package ‘knitr’ successfully unpacked and MD5 sums checked 2021-05-15T22:48:17.1769660Z ** using staged installation 2021-05-15T22:48:17.2066926Z ** R 2021-05-15T22:48:17.2439823Z ** demo 2021-05-15T22:48:17.2447458Z ** inst 2021-05-15T22:48:17.2552807Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:48:21.1629783Z ** help 2021-05-15T22:48:21.3470466Z *** installing help indices 2021-05-15T22:48:21.4679223Z ** building package indices 2021-05-15T22:48:21.7547159Z ** installing vignettes 2021-05-15T22:48:21.7623273Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:48:21.9552379Z ** testing if installed package can be loaded from final location 2021-05-15T22:48:22.2340533Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:48:22.2377240Z * DONE (knitr) 2021-05-15T22:48:22.4583194Z * installing *source* package ‘xopen’ ... 2021-05-15T22:48:22.4591972Z ** package ‘xopen’ successfully unpacked and MD5 sums checked 2021-05-15T22:48:22.4593698Z ** using staged installation 2021-05-15T22:48:22.4748463Z ** R 2021-05-15T22:48:22.4774179Z ** inst 2021-05-15T22:48:22.4781282Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:48:22.7187091Z ** help 2021-05-15T22:48:22.7278414Z *** installing help indices 2021-05-15T22:48:22.7490437Z ** building package indices 2021-05-15T22:48:22.9387991Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:48:23.1129183Z ** testing if installed package can be loaded from final location 2021-05-15T22:48:23.2981978Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:48:23.2993599Z * DONE (xopen) 2021-05-15T22:48:23.7404247Z * installing *source* package ‘tibble’ ... 2021-05-15T22:48:23.7510530Z ** package ‘tibble’ successfully unpacked and MD5 sums checked 2021-05-15T22:48:23.7511574Z ** using staged installation 2021-05-15T22:48:23.7733005Z ** libs 2021-05-15T22:48:23.7794049Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c attributes.c -o attributes.o 2021-05-15T22:48:23.8317579Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-05-15T22:48:23.9042287Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:48:23.9446013Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c matrixToDataFrame.c -o matrixToDataFrame.o 2021-05-15T22:48:24.0487921Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:48:24.0748977Z installing to /home/runner/work/_temp/Library/00LOCK-tibble/00new/tibble/libs 2021-05-15T22:48:24.0750405Z ** R 2021-05-15T22:48:24.0900825Z ** inst 2021-05-15T22:48:24.0932327Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:48:25.8107619Z ** help 2021-05-15T22:48:25.8887556Z *** installing help indices 2021-05-15T22:48:25.9398571Z *** copying figures 2021-05-15T22:48:25.9403812Z ** building package indices 2021-05-15T22:48:26.1887497Z ** installing vignettes 2021-05-15T22:48:26.1961801Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:48:26.5671798Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:48:26.5857298Z ** testing if installed package can be loaded from final location 2021-05-15T22:48:26.9732762Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:48:26.9763531Z * DONE (tibble) 2021-05-15T22:48:27.2488406Z * installing *source* package ‘pkgbuild’ ... 2021-05-15T22:48:27.2510843Z ** package ‘pkgbuild’ successfully unpacked and MD5 sums checked 2021-05-15T22:48:27.2511622Z ** using staged installation 2021-05-15T22:48:27.2672487Z ** R 2021-05-15T22:48:27.2759980Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:48:28.5457690Z ** help 2021-05-15T22:48:28.5864268Z *** installing help indices 2021-05-15T22:48:28.6227623Z ** building package indices 2021-05-15T22:48:28.8493036Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:48:29.1373484Z ** testing if installed package can be loaded from final location 2021-05-15T22:48:29.4082314Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:48:29.4095218Z * DONE (pkgbuild) 2021-05-15T22:48:29.7840573Z * installing *source* package ‘roxygen2’ ... 2021-05-15T22:48:29.7917143Z ** package ‘roxygen2’ successfully unpacked and MD5 sums checked 2021-05-15T22:48:29.7918569Z ** using staged installation 2021-05-15T22:48:29.8124869Z ** libs 2021-05-15T22:48:29.8195926Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-15T22:48:34.1512854Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c escapeExamples.cpp -o escapeExamples.o 2021-05-15T22:48:37.0224490Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c isComplete.cpp -o isComplete.o 2021-05-15T22:48:40.2280226Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c leadingSpaces.cpp -o leadingSpaces.o 2021-05-15T22:48:43.1781492Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c parser2.cpp -o parser2.o 2021-05-15T22:48:47.6210046Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c wrapUsage.cpp -o wrapUsage.o 2021-05-15T22:48:50.7641390Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o roxygen2.so RcppExports.o escapeExamples.o isComplete.o leadingSpaces.o parser2.o wrapUsage.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:48:50.8520769Z installing to /home/runner/work/_temp/Library/00LOCK-roxygen2/00new/roxygen2/libs 2021-05-15T22:48:50.8560876Z ** R 2021-05-15T22:48:50.8894574Z ** inst 2021-05-15T22:48:50.8911785Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:48:54.5919271Z ** help 2021-05-15T22:48:54.6657986Z *** installing help indices 2021-05-15T22:48:54.7167670Z *** copying figures 2021-05-15T22:48:54.7170931Z ** building package indices 2021-05-15T22:48:54.9431180Z ** installing vignettes 2021-05-15T22:48:54.9541190Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:48:55.2873327Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:48:55.3079757Z ** testing if installed package can be loaded from final location 2021-05-15T22:48:55.6990316Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:48:55.7034543Z * DONE (roxygen2) 2021-05-15T22:48:55.9298264Z * installing *source* package ‘rematch2’ ... 2021-05-15T22:48:55.9311758Z ** package ‘rematch2’ successfully unpacked and MD5 sums checked 2021-05-15T22:48:55.9313451Z ** using staged installation 2021-05-15T22:48:55.9459723Z ** R 2021-05-15T22:48:55.9507082Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:48:56.4147155Z ** help 2021-05-15T22:48:56.4445636Z *** installing help indices 2021-05-15T22:48:56.4660025Z ** building package indices 2021-05-15T22:48:56.6614452Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:48:56.9855214Z ** testing if installed package can be loaded from final location 2021-05-15T22:48:57.3365698Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:48:57.3371153Z * DONE (rematch2) 2021-05-15T22:48:57.5924053Z * installing *source* package ‘rcmdcheck’ ... 2021-05-15T22:48:57.5950080Z ** package ‘rcmdcheck’ successfully unpacked and MD5 sums checked 2021-05-15T22:48:57.5951143Z ** using staged installation 2021-05-15T22:48:57.6099301Z ** R 2021-05-15T22:48:57.6186322Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:48:58.8732141Z ** help 2021-05-15T22:48:58.9106558Z *** installing help indices 2021-05-15T22:48:58.9414102Z ** building package indices 2021-05-15T22:48:59.1565933Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:48:59.4546219Z ** testing if installed package can be loaded from final location 2021-05-15T22:48:59.7571751Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:48:59.7584241Z * DONE (rcmdcheck) 2021-05-15T22:49:00.0142275Z * installing *source* package ‘waldo’ ... 2021-05-15T22:49:00.0166766Z ** package ‘waldo’ successfully unpacked and MD5 sums checked 2021-05-15T22:49:00.0170539Z ** using staged installation 2021-05-15T22:49:00.0327613Z ** R 2021-05-15T22:49:00.0390266Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:49:00.7632880Z ** help 2021-05-15T22:49:00.7792274Z *** installing help indices 2021-05-15T22:49:00.7979859Z *** copying figures 2021-05-15T22:49:00.7982907Z ** building package indices 2021-05-15T22:49:00.9929729Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:49:01.2450356Z ** testing if installed package can be loaded from final location 2021-05-15T22:49:01.4880017Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:49:01.4889991Z * DONE (waldo) 2021-05-15T22:49:01.9744226Z * installing *source* package ‘testthat’ ... 2021-05-15T22:49:01.9872016Z ** package ‘testthat’ successfully unpacked and MD5 sums checked 2021-05-15T22:49:01.9872916Z ** using staged installation 2021-05-15T22:49:02.0076552Z ** libs 2021-05-15T22:49:02.0130680Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:49:02.0581794Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o 2021-05-15T22:49:02.1167165Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-catch.cpp -o test-catch.o 2021-05-15T22:49:02.9036508Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-example.cpp -o test-example.o 2021-05-15T22:49:03.5025370Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-runner.cpp -o test-runner.o 2021-05-15T22:49:19.0430796Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o testthat.so init.o reassign.o test-catch.o test-example.o test-runner.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:49:19.1908337Z installing to /home/runner/work/_temp/Library/00LOCK-testthat/00new/testthat/libs 2021-05-15T22:49:19.1992109Z ** R 2021-05-15T22:49:19.2322989Z ** inst 2021-05-15T22:49:19.2351168Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:49:27.8946408Z ** help 2021-05-15T22:49:28.1074102Z *** installing help indices 2021-05-15T22:49:28.2707692Z *** copying figures 2021-05-15T22:49:28.2712368Z ** building package indices 2021-05-15T22:49:28.5644725Z ** installing vignettes 2021-05-15T22:49:28.5765619Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:49:28.7801006Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:49:28.8015831Z ** testing if installed package can be loaded from final location 2021-05-15T22:49:29.2192426Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:49:29.2274312Z * DONE (testthat) 2021-05-15T22:49:29.5653140Z * installing *source* package ‘devtools’ ... 2021-05-15T22:49:29.5705783Z ** package ‘devtools’ successfully unpacked and MD5 sums checked 2021-05-15T22:49:29.5707603Z ** using staged installation 2021-05-15T22:49:29.5965715Z ** R 2021-05-15T22:49:29.6095407Z ** inst 2021-05-15T22:49:29.6104209Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:49:31.1356794Z ** help 2021-05-15T22:49:31.2367998Z *** installing help indices 2021-05-15T22:49:31.2982103Z *** copying figures 2021-05-15T22:49:31.2984054Z ** building package indices 2021-05-15T22:49:31.5426890Z ** installing vignettes 2021-05-15T22:49:31.5458598Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:49:32.1300470Z ** testing if installed package can be loaded from final location 2021-05-15T22:49:32.7645186Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:49:32.7663982Z * DONE (devtools) 2021-05-15T22:49:32.7777992Z 2021-05-15T22:49:32.7778944Z The downloaded source packages are in 2021-05-15T22:49:32.7784536Z ‘/tmp/Rtmp3iS4hL/downloaded_packages’ 2021-05-15T22:49:32.8659570Z Downloading GitHub repo muschellij2/desc@HEAD 2021-05-15T22:49:33.7667124Z 2021-05-15T22:49:34.0697075Z 2021-05-15T22:49:34.0703947Z checking for file ‘/tmp/Rtmp3iS4hL/remotes7306193e81f2/muschellij2-desc-7be86f2/DESCRIPTION’ ... 2021-05-15T22:49:34.0751549Z 2021-05-15T22:49:34.0754280Z ✔ checking for file ‘/tmp/Rtmp3iS4hL/remotes7306193e81f2/muschellij2-desc-7be86f2/DESCRIPTION’ 2021-05-15T22:49:34.0799454Z 2021-05-15T22:49:34.0821397Z 2021-05-15T22:49:34.0823558Z ─ preparing ‘desc’: 2021-05-15T22:49:34.0831703Z 2021-05-15T22:49:34.0833776Z 2021-05-15T22:49:34.0941124Z checking DESCRIPTION meta-information ... 2021-05-15T22:49:34.0962302Z 2021-05-15T22:49:34.0964420Z ✔ checking DESCRIPTION meta-information 2021-05-15T22:49:34.1647544Z 2021-05-15T22:49:34.1686284Z 2021-05-15T22:49:34.1690778Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-15T22:49:34.1704538Z 2021-05-15T22:49:34.1728341Z 2021-05-15T22:49:34.1730635Z ─ checking for empty or unneeded directories 2021-05-15T22:49:34.1826436Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-15T22:49:34.1834810Z 2021-05-15T22:49:34.1853675Z 2021-05-15T22:49:34.1855398Z ─ building ‘desc_1.2.0.9000.tar.gz’ 2021-05-15T22:49:34.2885216Z 2021-05-15T22:49:34.2888558Z 2021-05-15T22:49:34.2889920Z 2021-05-15T22:49:34.2992113Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-15T22:49:34.2993234Z (as ‘lib’ is unspecified) 2021-05-15T22:49:34.6193954Z * installing *source* package ‘desc’ ... 2021-05-15T22:49:34.6233378Z ** using staged installation 2021-05-15T22:49:34.6432514Z ** R 2021-05-15T22:49:34.6575316Z ** inst 2021-05-15T22:49:34.6595238Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:49:36.2801934Z ** help 2021-05-15T22:49:36.4146640Z *** installing help indices 2021-05-15T22:49:36.5076052Z ** building package indices 2021-05-15T22:49:36.7963386Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:49:36.9892987Z ** testing if installed package can be loaded from final location 2021-05-15T22:49:37.2134973Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:49:37.2150232Z * DONE (desc) 2021-05-15T22:49:37.4187283Z 2021-05-15T22:49:37.4188536Z 2021-05-15T22:49:37.4200613Z checking for file ‘/tmp/Rtmp3iS4hL/remotes730631b8f408/muschellij2-ghtravis-0b26809/DESCRIPTION’ ... 2021-05-15T22:49:37.4233379Z 2021-05-15T22:49:37.4235096Z ✔ checking for file ‘/tmp/Rtmp3iS4hL/remotes730631b8f408/muschellij2-ghtravis-0b26809/DESCRIPTION’ 2021-05-15T22:49:37.4331571Z 2021-05-15T22:49:37.4332005Z 2021-05-15T22:49:37.4332965Z ─ preparing ‘ghtravis’: 2021-05-15T22:49:37.4335415Z 2021-05-15T22:49:37.4336107Z 2021-05-15T22:49:37.4444187Z checking DESCRIPTION meta-information ... 2021-05-15T22:49:37.4444704Z 2021-05-15T22:49:37.4445376Z ✔ checking DESCRIPTION meta-information 2021-05-15T22:49:37.4858962Z 2021-05-15T22:49:37.4859485Z 2021-05-15T22:49:37.4860699Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-15T22:49:37.4861248Z 2021-05-15T22:49:37.4861579Z 2021-05-15T22:49:37.4862303Z ─ checking for empty or unneeded directories 2021-05-15T22:49:37.4863170Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-15T22:49:37.4943690Z 2021-05-15T22:49:37.4964554Z 2021-05-15T22:49:37.4967636Z ─ building ‘ghtravis_0.15.1.tar.gz’ 2021-05-15T22:49:37.5186530Z 2021-05-15T22:49:37.5190503Z 2021-05-15T22:49:37.5193535Z 2021-05-15T22:49:37.5508276Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-15T22:49:37.5509898Z (as ‘lib’ is unspecified) 2021-05-15T22:49:37.7940540Z * installing *source* package ‘ghtravis’ ... 2021-05-15T22:49:37.7943534Z ** using staged installation 2021-05-15T22:49:37.8092031Z ** R 2021-05-15T22:49:37.8174328Z ** inst 2021-05-15T22:49:37.8183624Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:49:39.0566105Z ** help 2021-05-15T22:49:39.1184762Z *** installing help indices 2021-05-15T22:49:39.1642920Z ** building package indices 2021-05-15T22:49:39.4220289Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:49:40.1253439Z ** testing if installed package can be loaded from final location 2021-05-15T22:49:40.8050190Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:49:40.8060480Z * DONE (ghtravis) 2021-05-15T22:49:40.8148555Z Using github PAT from envvar GITHUB_PAT 2021-05-15T22:49:40.9668686Z Downloading GitHub repo muschellij2/aghast@HEAD 2021-05-15T22:49:41.7898817Z 2021-05-15T22:49:41.7901573Z tidyselect (NA -> 1.1.1) [CRAN] 2021-05-15T22:49:41.7903183Z Installing 5 packages: tidyselect, generics, cpp11, dplyr, tidyr 2021-05-15T22:49:41.7905507Z generics (NA -> 0.1.0) [CRAN] 2021-05-15T22:49:41.7907497Z cpp11 (NA -> 0.2.7) [CRAN] 2021-05-15T22:49:41.7909132Z dplyr (NA -> 1.0.6) [CRAN] 2021-05-15T22:49:41.7910741Z tidyr (NA -> 1.1.3) [CRAN] 2021-05-15T22:49:41.7912456Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-15T22:49:41.7914033Z (as ‘lib’ is unspecified) 2021-05-15T22:49:55.7102603Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyselect_1.1.1.tar.gz' 2021-05-15T22:49:55.9877340Z Content type 'binary/octet-stream' length 92124 bytes (89 KB) 2021-05-15T22:49:55.9944937Z ================================================== 2021-05-15T22:49:55.9945711Z downloaded 89 KB 2021-05-15T22:49:55.9946420Z 2021-05-15T22:49:55.9982977Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/generics_0.1.0.tar.gz' 2021-05-15T22:49:56.2658709Z Content type 'binary/octet-stream' length 118869 bytes (116 KB) 2021-05-15T22:49:56.2764971Z ================================================== 2021-05-15T22:49:56.2765861Z downloaded 116 KB 2021-05-15T22:49:56.2766501Z 2021-05-15T22:49:56.2798410Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cpp11_0.2.7.tar.gz' 2021-05-15T22:49:56.5612291Z Content type 'binary/octet-stream' length 200157 bytes (195 KB) 2021-05-15T22:49:56.5748471Z ================================================== 2021-05-15T22:49:56.5749087Z downloaded 195 KB 2021-05-15T22:49:56.5749419Z 2021-05-15T22:49:56.5791066Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/dplyr_1.0.6.tar.gz' 2021-05-15T22:49:56.8540363Z Content type 'binary/octet-stream' length 954544 bytes (932 KB) 2021-05-15T22:49:56.9434668Z ================================================== 2021-05-15T22:49:56.9435305Z downloaded 932 KB 2021-05-15T22:49:56.9435633Z 2021-05-15T22:49:56.9481227Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyr_1.1.3.tar.gz' 2021-05-15T22:49:57.8951968Z Content type 'binary/octet-stream' length 706784 bytes (690 KB) 2021-05-15T22:49:57.8954583Z ================================================== 2021-05-15T22:49:57.8955777Z downloaded 690 KB 2021-05-15T22:49:57.8956589Z 2021-05-15T22:49:57.8958444Z * installing *source* package ‘tidyselect’ ... 2021-05-15T22:49:57.8960580Z ** package ‘tidyselect’ successfully unpacked and MD5 sums checked 2021-05-15T22:49:57.8961375Z ** using staged installation 2021-05-15T22:49:57.8961825Z ** R 2021-05-15T22:49:57.8962161Z ** inst 2021-05-15T22:49:57.8962981Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:49:58.5937983Z ** help 2021-05-15T22:49:58.6554772Z *** installing help indices 2021-05-15T22:49:58.6998510Z ** building package indices 2021-05-15T22:49:58.9628394Z ** installing vignettes 2021-05-15T22:49:58.9670973Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:49:59.2572715Z ** testing if installed package can be loaded from final location 2021-05-15T22:49:59.5584297Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:49:59.5597158Z * DONE (tidyselect) 2021-05-15T22:49:59.8710628Z * installing *source* package ‘generics’ ... 2021-05-15T22:49:59.8742880Z ** package ‘generics’ successfully unpacked and MD5 sums checked 2021-05-15T22:49:59.8744789Z ** using staged installation 2021-05-15T22:49:59.8884996Z ** R 2021-05-15T22:49:59.8941714Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:50:00.2286092Z ** help 2021-05-15T22:50:00.3552742Z *** installing help indices 2021-05-15T22:50:00.4024780Z ** building package indices 2021-05-15T22:50:00.6566068Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:50:00.8494454Z ** testing if installed package can be loaded from final location 2021-05-15T22:50:01.0429458Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:50:01.0436102Z * DONE (generics) 2021-05-15T22:50:01.3324540Z * installing *source* package ‘cpp11’ ... 2021-05-15T22:50:01.3364543Z ** package ‘cpp11’ successfully unpacked and MD5 sums checked 2021-05-15T22:50:01.3366644Z ** using staged installation 2021-05-15T22:50:01.3537165Z ** R 2021-05-15T22:50:01.3586428Z ** inst 2021-05-15T22:50:01.3617872Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:50:01.7827797Z ** help 2021-05-15T22:50:01.8047000Z *** installing help indices 2021-05-15T22:50:01.8238003Z ** building package indices 2021-05-15T22:50:02.0355710Z ** installing vignettes 2021-05-15T22:50:02.0414231Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:50:02.2420913Z ** testing if installed package can be loaded from final location 2021-05-15T22:50:02.4339413Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:50:02.4349000Z * DONE (cpp11) 2021-05-15T22:50:02.9521936Z * installing *source* package ‘dplyr’ ... 2021-05-15T22:50:02.9665110Z ** package ‘dplyr’ successfully unpacked and MD5 sums checked 2021-05-15T22:50:02.9668159Z ** using staged installation 2021-05-15T22:50:02.9905584Z ** libs 2021-05-15T22:50:02.9970617Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c chop.cpp -o chop.o 2021-05-15T22:50:03.1475898Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c filter.cpp -o filter.o 2021-05-15T22:50:03.3323367Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c funs.cpp -o funs.o 2021-05-15T22:50:03.4715579Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c group_by.cpp -o group_by.o 2021-05-15T22:50:04.0732104Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c group_data.cpp -o group_data.o 2021-05-15T22:50:04.1871164Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c imports.cpp -o imports.o 2021-05-15T22:50:04.3049526Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.cpp -o init.o 2021-05-15T22:50:04.4288059Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mask.cpp -o mask.o 2021-05-15T22:50:04.5691352Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mutate.cpp -o mutate.o 2021-05-15T22:50:04.7018401Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c slice.cpp -o slice.o 2021-05-15T22:50:04.8040211Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c summarise.cpp -o summarise.o 2021-05-15T22:50:04.9817825Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o dplyr.so chop.o filter.o funs.o group_by.o group_data.o imports.o init.o mask.o mutate.o slice.o summarise.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:50:05.0511242Z installing to /home/runner/work/_temp/Library/00LOCK-dplyr/00new/dplyr/libs 2021-05-15T22:50:05.0528661Z ** R 2021-05-15T22:50:05.1019096Z ** data 2021-05-15T22:50:05.1024372Z *** moving datasets to lazyload DB 2021-05-15T22:50:05.2014528Z ** inst 2021-05-15T22:50:05.2043134Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:50:09.8058284Z ** help 2021-05-15T22:50:10.2221804Z *** installing help indices 2021-05-15T22:50:10.4168912Z *** copying figures 2021-05-15T22:50:10.4172131Z ** building package indices 2021-05-15T22:50:10.7427009Z ** installing vignettes 2021-05-15T22:50:10.7551925Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:50:11.1915475Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:50:11.2084810Z ** testing if installed package can be loaded from final location 2021-05-15T22:50:11.7147462Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:50:11.7148821Z * DONE (dplyr) 2021-05-15T22:50:12.0505385Z * installing *source* package ‘tidyr’ ... 2021-05-15T22:50:12.0575170Z ** package ‘tidyr’ successfully unpacked and MD5 sums checked 2021-05-15T22:50:12.0576996Z ** using staged installation 2021-05-15T22:50:12.0796111Z ** libs 2021-05-15T22:50:12.0872502Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c cpp11.cpp -o cpp11.o 2021-05-15T22:50:12.9589870Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c fill.cpp -o fill.o 2021-05-15T22:50:13.2702455Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c melt.cpp -o melt.o 2021-05-15T22:50:14.7996100Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c simplifyPieces.cpp -o simplifyPieces.o 2021-05-15T22:50:16.0113085Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tidyr.so cpp11.o fill.o melt.o simplifyPieces.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:50:16.0908383Z installing to /home/runner/work/_temp/Library/00LOCK-tidyr/00new/tidyr/libs 2021-05-15T22:50:16.0932105Z ** R 2021-05-15T22:50:16.1092175Z ** data 2021-05-15T22:50:16.1102706Z *** moving datasets to lazyload DB 2021-05-15T22:50:16.2843996Z ** inst 2021-05-15T22:50:16.2865403Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:50:17.7262018Z ** help 2021-05-15T22:50:17.8565060Z *** installing help indices 2021-05-15T22:50:17.9380564Z *** copying figures 2021-05-15T22:50:17.9387333Z ** building package indices 2021-05-15T22:50:18.1937202Z ** installing vignettes 2021-05-15T22:50:18.2051198Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:50:18.6434217Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:50:18.6630541Z ** testing if installed package can be loaded from final location 2021-05-15T22:50:19.1441897Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:50:19.1461046Z * DONE (tidyr) 2021-05-15T22:50:19.1628400Z 2021-05-15T22:50:19.1630637Z The downloaded source packages are in 2021-05-15T22:50:19.1631793Z ‘/tmp/Rtmp3iS4hL/downloaded_packages’ 2021-05-15T22:50:19.3282646Z 2021-05-15T22:50:19.3284438Z checking for file ‘/tmp/Rtmp3iS4hL/remotes7306514d7737/muschellij2-aghast-0c3b853/DESCRIPTION’ ... 2021-05-15T22:50:19.3317697Z 2021-05-15T22:50:19.3319234Z ✔ checking for file ‘/tmp/Rtmp3iS4hL/remotes7306514d7737/muschellij2-aghast-0c3b853/DESCRIPTION’ 2021-05-15T22:50:19.3403868Z 2021-05-15T22:50:19.3404478Z 2021-05-15T22:50:19.3405466Z ─ preparing ‘aghast’: 2021-05-15T22:50:19.3405875Z 2021-05-15T22:50:19.3406256Z 2021-05-15T22:50:19.3478865Z checking DESCRIPTION meta-information ... 2021-05-15T22:50:19.3515580Z 2021-05-15T22:50:19.3519643Z ✔ checking DESCRIPTION meta-information 2021-05-15T22:50:19.3736274Z 2021-05-15T22:50:19.3765385Z 2021-05-15T22:50:19.3768070Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-15T22:50:19.3774419Z 2021-05-15T22:50:19.3793271Z 2021-05-15T22:50:19.3795628Z ─ checking for empty or unneeded directories 2021-05-15T22:50:19.3798214Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-15T22:50:19.3806822Z 2021-05-15T22:50:19.3821730Z 2021-05-15T22:50:19.3823235Z ─ building ‘aghast_0.2.1.tar.gz’ 2021-05-15T22:50:19.3903426Z 2021-05-15T22:50:19.3905123Z 2021-05-15T22:50:19.3906353Z 2021-05-15T22:50:19.3970097Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-15T22:50:19.3971054Z (as ‘lib’ is unspecified) 2021-05-15T22:50:19.5898576Z * installing *source* package ‘aghast’ ... 2021-05-15T22:50:19.5903950Z ** using staged installation 2021-05-15T22:50:19.6064132Z ** R 2021-05-15T22:50:19.6119210Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:50:20.0023764Z ** help 2021-05-15T22:50:20.0318836Z *** installing help indices 2021-05-15T22:50:20.0505631Z ** building package indices 2021-05-15T22:50:20.2392317Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:50:20.4107451Z ** testing if installed package can be loaded from final location 2021-05-15T22:50:20.5733145Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:50:20.5738428Z * DONE (aghast) 2021-05-15T22:50:20.5810264Z Installing 1 packages: covr 2021-05-15T22:50:20.5817291Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-15T22:50:20.5818389Z (as ‘lib’ is unspecified) 2021-05-15T22:50:33.6342111Z also installing the dependencies ‘lazyeval’, ‘rex’ 2021-05-15T22:50:33.6343129Z 2021-05-15T22:50:33.6346439Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lazyeval_0.2.2.tar.gz' 2021-05-15T22:50:33.9178497Z Content type 'application/x-tar' length 83462 bytes (81 KB) 2021-05-15T22:50:33.9236866Z ================================================== 2021-05-15T22:50:33.9238413Z downloaded 81 KB 2021-05-15T22:50:33.9240424Z 2021-05-15T22:50:33.9269801Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rex_1.2.0.tar.gz' 2021-05-15T22:50:34.2108797Z Content type 'binary/octet-stream' length 91701 bytes (89 KB) 2021-05-15T22:50:34.2197821Z ================================================== 2021-05-15T22:50:34.2199135Z downloaded 89 KB 2021-05-15T22:50:34.2199976Z 2021-05-15T22:50:34.2228352Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/covr_3.5.1.tar.gz' 2021-05-15T22:50:34.6082634Z Content type 'binary/octet-stream' length 147467 bytes (144 KB) 2021-05-15T22:50:34.6196831Z ================================================== 2021-05-15T22:50:34.6197350Z downloaded 144 KB 2021-05-15T22:50:34.6197647Z 2021-05-15T22:50:34.8737175Z * installing *source* package ‘lazyeval’ ... 2021-05-15T22:50:34.8766294Z ** package ‘lazyeval’ successfully unpacked and MD5 sums checked 2021-05-15T22:50:34.8768461Z ** using staged installation 2021-05-15T22:50:34.8877637Z ** libs 2021-05-15T22:50:34.8925427Z 2021-05-15T22:50:34.8927130Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c expr.c -o expr.o 2021-05-15T22:50:34.9513983Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:50:34.9917692Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c interp.c -o interp.o 2021-05-15T22:50:35.0586721Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c lazy.c -o lazy.o 2021-05-15T22:50:35.1378523Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c name.c -o name.o 2021-05-15T22:50:35.2046735Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-15T22:50:35.2718261Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o lazyeval.so expr.o init.o interp.o lazy.o name.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:50:35.3027994Z installing to /home/runner/work/_temp/Library/00LOCK-lazyeval/00new/lazyeval/libs 2021-05-15T22:50:35.3029271Z ** R 2021-05-15T22:50:35.3081463Z ** inst 2021-05-15T22:50:35.3092007Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:50:35.7779941Z ** help 2021-05-15T22:50:35.8428396Z *** installing help indices 2021-05-15T22:50:35.8839467Z ** building package indices 2021-05-15T22:50:36.1067361Z ** installing vignettes 2021-05-15T22:50:36.1120647Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:50:36.3021838Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:50:36.3208785Z ** testing if installed package can be loaded from final location 2021-05-15T22:50:36.5042475Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:50:36.5050225Z * DONE (lazyeval) 2021-05-15T22:50:36.7694591Z * installing *source* package ‘rex’ ... 2021-05-15T22:50:36.7716599Z ** package ‘rex’ successfully unpacked and MD5 sums checked 2021-05-15T22:50:36.7718498Z ** using staged installation 2021-05-15T22:50:36.7866309Z ** R 2021-05-15T22:50:36.7957727Z ** inst 2021-05-15T22:50:36.7974646Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:50:37.3492046Z ** help 2021-05-15T22:50:37.4028959Z *** installing help indices 2021-05-15T22:50:37.4440411Z ** building package indices 2021-05-15T22:50:37.6739959Z ** installing vignettes 2021-05-15T22:50:37.6843391Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:50:37.8720088Z ** testing if installed package can be loaded from final location 2021-05-15T22:50:38.0712162Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:50:38.0720730Z * DONE (rex) 2021-05-15T22:50:38.4346390Z * installing *source* package ‘covr’ ... 2021-05-15T22:50:38.4406449Z ** package ‘covr’ successfully unpacked and MD5 sums checked 2021-05-15T22:50:38.4408575Z ** using staged installation 2021-05-15T22:50:38.4608654Z ** libs 2021-05-15T22:50:38.4655877Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o 2021-05-15T22:50:38.5253690Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o covr.so reassign.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:50:38.5406472Z installing to /home/runner/work/_temp/Library/00LOCK-covr/00new/covr/libs 2021-05-15T22:50:38.5420000Z ** R 2021-05-15T22:50:38.5582354Z ** inst 2021-05-15T22:50:38.5614276Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:50:39.9170636Z ** help 2021-05-15T22:50:39.9796875Z *** installing help indices 2021-05-15T22:50:40.0237424Z *** copying figures 2021-05-15T22:50:40.0240163Z ** building package indices 2021-05-15T22:50:40.2509503Z ** installing vignettes 2021-05-15T22:50:40.2579098Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:50:40.4630465Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:50:40.4808777Z ** testing if installed package can be loaded from final location 2021-05-15T22:50:40.7081269Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:50:40.7099806Z * DONE (covr) 2021-05-15T22:50:40.7209119Z 2021-05-15T22:50:40.7210095Z The downloaded source packages are in 2021-05-15T22:50:40.7211492Z ‘/tmp/Rtmp3iS4hL/downloaded_packages’ 2021-05-15T22:50:40.7343293Z ##[group]Run Rscript -e "tic::before_install()" 2021-05-15T22:50:40.7343930Z Rscript -e "tic::before_install()" 2021-05-15T22:50:40.7391819Z shell: /usr/bin/bash -e {0} 2021-05-15T22:50:40.7392183Z env: 2021-05-15T22:50:40.7392692Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:50:40.7393123Z TIC_DEPLOY_KEY: 2021-05-15T22:50:40.7393867Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:50:40.7395286Z GITHUB_PAT: *** 2021-05-15T22:50:40.7395661Z COVERALLS_TOKEN: 2021-05-15T22:50:40.7396089Z continue-on-error: true 2021-05-15T22:50:40.7396521Z VDIFFR_RUN_TESTS: 2021-05-15T22:50:40.7396946Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:50:40.7397350Z TZ: UTC 2021-05-15T22:50:40.7397692Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:50:40.7398068Z NOT_CRAN: true 2021-05-15T22:50:40.7398408Z ##[endgroup] 2021-05-15T22:50:41.0251984Z ✔ Loading tic stage configuration from tic.R 2021-05-15T22:50:41.1637166Z Running before_install: step_install_remote_binaries() 2021-05-15T22:50:41.6732630Z ##[group]Run remotes::install_deps(dependencies = TRUE) 2021-05-15T22:50:41.6733487Z remotes::install_deps(dependencies = TRUE) 2021-05-15T22:50:41.6734189Z remotes::install_cran("rcmdcheck") 2021-05-15T22:50:41.6734795Z remotes::install_cran("markdown") 2021-05-15T22:50:41.6741987Z shell: /usr/local/bin/Rscript {0} 2021-05-15T22:50:41.6742372Z env: 2021-05-15T22:50:41.6742765Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:50:41.6743195Z TIC_DEPLOY_KEY: 2021-05-15T22:50:41.6743940Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:50:41.6745389Z GITHUB_PAT: *** 2021-05-15T22:50:41.6745761Z COVERALLS_TOKEN: 2021-05-15T22:50:41.6746344Z continue-on-error: true 2021-05-15T22:50:41.6746781Z VDIFFR_RUN_TESTS: 2021-05-15T22:50:41.6747210Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:50:41.6747619Z TZ: UTC 2021-05-15T22:50:41.6747979Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:50:41.6748381Z NOT_CRAN: true 2021-05-15T22:50:41.6748717Z ##[endgroup] 2021-05-15T22:50:58.1641737Z R.methodsS3 (NA -> 1.8.1 ) [CRAN] 2021-05-15T22:50:58.1644130Z R.oo (NA -> 1.24.0 ) [CRAN] 2021-05-15T22:50:58.1645897Z RNifti (NA -> 1.3.1 ) [CRAN] 2021-05-15T22:50:58.1647576Z abind (NA -> 1.4-5 ) [CRAN] 2021-05-15T22:50:58.1649249Z bitops (NA -> 1.0-7 ) [CRAN] 2021-05-15T22:50:58.1650919Z base64enc (NA -> 0.1-3 ) [CRAN] 2021-05-15T22:50:58.1652646Z R.utils (NA -> 2.10.1 ) [CRAN] 2021-05-15T22:50:58.1654327Z matrixStats (NA -> 0.58.0 ) [CRAN] 2021-05-15T22:50:58.1656045Z oro.nifti (NA -> 0.11.0 ) [CRAN] 2021-05-15T22:50:58.1657712Z tinytex (NA -> 0.31 ) [CRAN] 2021-05-15T22:50:58.1659361Z htmltools (NA -> 0.5.1.1) [CRAN] 2021-05-15T22:50:58.1662609Z neurobase (NA -> 1.32.1 ) [CRAN] 2021-05-15T22:50:58.1664521Z rmarkdown (NA -> 2.8 ) [CRAN] 2021-05-15T22:50:58.1677994Z Installing 13 packages: R.methodsS3, R.oo, RNifti, abind, bitops, base64enc, R.utils, matrixStats, oro.nifti, tinytex, htmltools, neurobase, rmarkdown 2021-05-15T22:50:58.1694849Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-15T22:50:58.1696433Z (as ‘lib’ is unspecified) 2021-05-15T22:51:14.3404419Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.methodsS3_1.8.1.tar.gz' 2021-05-15T22:51:15.5443197Z Content type 'binary/octet-stream' length 23789 bytes (23 KB) 2021-05-15T22:51:15.5444215Z ================================================== 2021-05-15T22:51:15.5444892Z downloaded 23 KB 2021-05-15T22:51:15.5445332Z 2021-05-15T22:51:15.5502038Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.oo_1.24.0.tar.gz' 2021-05-15T22:51:16.1502324Z Content type 'binary/octet-stream' length 382199 bytes (373 KB) 2021-05-15T22:51:16.1681825Z ================================================== 2021-05-15T22:51:16.1682397Z downloaded 373 KB 2021-05-15T22:51:16.1682700Z 2021-05-15T22:51:16.1729014Z trying URL 'https://cloud.r-project.org/src/contrib/RNifti_1.3.1.tar.gz' 2021-05-15T22:51:16.2022881Z Content type 'application/x-gzip' length 1076925 bytes (1.0 MB) 2021-05-15T22:51:16.2287470Z ================================================== 2021-05-15T22:51:16.2288101Z downloaded 1.0 MB 2021-05-15T22:51:16.2288432Z 2021-05-15T22:51:16.2317989Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/abind_1.4-5.tar.gz' 2021-05-15T22:51:16.6840787Z Content type 'application/x-tar' length 21895 bytes (21 KB) 2021-05-15T22:51:16.6846044Z ================================================== 2021-05-15T22:51:16.6846953Z downloaded 21 KB 2021-05-15T22:51:16.6847513Z 2021-05-15T22:51:16.6887895Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bitops_1.0-7.tar.gz' 2021-05-15T22:51:17.0136686Z Content type 'binary/octet-stream' length 10887 bytes (10 KB) 2021-05-15T22:51:17.0139091Z ================================================== 2021-05-15T22:51:17.0140739Z downloaded 10 KB 2021-05-15T22:51:17.0141726Z 2021-05-15T22:51:17.0187900Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/base64enc_0.1-3.tar.gz' 2021-05-15T22:51:17.4309245Z Content type 'application/x-tar' length 7843 bytes 2021-05-15T22:51:17.4310612Z ================================================== 2021-05-15T22:51:17.4311515Z downloaded 7843 bytes 2021-05-15T22:51:17.4312080Z 2021-05-15T22:51:17.4366608Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.utils_2.10.1.tar.gz' 2021-05-15T22:51:18.2913114Z Content type 'binary/octet-stream' length 361740 bytes (353 KB) 2021-05-15T22:51:18.3124363Z ================================================== 2021-05-15T22:51:18.3124899Z downloaded 353 KB 2021-05-15T22:51:18.3125205Z 2021-05-15T22:51:18.3166054Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/matrixStats_0.58.0.tar.gz' 2021-05-15T22:51:18.8958202Z Content type 'binary/octet-stream' length 194842 bytes (190 KB) 2021-05-15T22:51:18.9096830Z ================================================== 2021-05-15T22:51:18.9097372Z downloaded 190 KB 2021-05-15T22:51:18.9097725Z 2021-05-15T22:51:18.9141562Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/oro.nifti_0.11.0.tar.gz' 2021-05-15T22:51:19.5690640Z Content type 'binary/octet-stream' length 5230493 bytes (5.0 MB) 2021-05-15T22:51:19.7453874Z ================================================== 2021-05-15T22:51:19.7454828Z downloaded 5.0 MB 2021-05-15T22:51:19.7455350Z 2021-05-15T22:51:19.7492602Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tinytex_0.31.tar.gz' 2021-05-15T22:51:20.1704855Z Content type 'binary/octet-stream' length 29350 bytes (28 KB) 2021-05-15T22:51:20.1707184Z ================================================== 2021-05-15T22:51:20.1708322Z downloaded 28 KB 2021-05-15T22:51:20.1709572Z 2021-05-15T22:51:20.1755645Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/htmltools_0.5.1.1.tar.gz' 2021-05-15T22:51:20.6823529Z Content type 'binary/octet-stream' length 72110 bytes (70 KB) 2021-05-15T22:51:20.6824958Z ================================================== 2021-05-15T22:51:20.6826409Z downloaded 70 KB 2021-05-15T22:51:20.6827052Z 2021-05-15T22:51:20.6882677Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/neurobase_1.32.1.tar.gz' 2021-05-15T22:51:21.1429853Z Content type 'binary/octet-stream' length 1515038 bytes (1.4 MB) 2021-05-15T22:51:21.1773415Z ================================================== 2021-05-15T22:51:21.1774267Z downloaded 1.4 MB 2021-05-15T22:51:21.1774776Z 2021-05-15T22:51:21.1808554Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rmarkdown_2.8.tar.gz' 2021-05-15T22:51:21.6875172Z Content type 'binary/octet-stream' length 3236609 bytes (3.1 MB) 2021-05-15T22:51:21.7285201Z ================================================== 2021-05-15T22:51:21.7286592Z downloaded 3.1 MB 2021-05-15T22:51:21.7287153Z 2021-05-15T22:51:21.9540899Z * installing *source* package ‘R.methodsS3’ ... 2021-05-15T22:51:21.9560807Z ** package ‘R.methodsS3’ successfully unpacked and MD5 sums checked 2021-05-15T22:51:21.9562297Z ** using staged installation 2021-05-15T22:51:21.9689761Z ** R 2021-05-15T22:51:21.9775725Z ** inst 2021-05-15T22:51:21.9786441Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:51:22.4507086Z ** help 2021-05-15T22:51:22.4871271Z *** installing help indices 2021-05-15T22:51:22.5208780Z ** building package indices 2021-05-15T22:51:22.7105631Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:51:22.8787240Z ** testing if installed package can be loaded from final location 2021-05-15T22:51:23.0499223Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:51:23.0510168Z * DONE (R.methodsS3) 2021-05-15T22:51:23.3829639Z * installing *source* package ‘RNifti’ ... 2021-05-15T22:51:23.3889867Z ** package ‘RNifti’ successfully unpacked and MD5 sums checked 2021-05-15T22:51:23.3892502Z ** using staged installation 2021-05-15T22:51:23.4020047Z ** libs 2021-05-15T22:51:23.4072425Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c main.cpp -o main.o 2021-05-15T22:51:40.6926602Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zzz.c -o zzz.o 2021-05-15T22:51:40.7749687Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/adler32.c -o zlib/adler32.o 2021-05-15T22:51:40.8596181Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/compress.c -o zlib/compress.o 2021-05-15T22:51:40.8952384Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/crc32.c -o zlib/crc32.o 2021-05-15T22:51:40.9939761Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/deflate.c -o zlib/deflate.o 2021-05-15T22:51:41.4530225Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzclose.c -o zlib/gzclose.o 2021-05-15T22:51:41.4935989Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzlib.c -o zlib/gzlib.o 2021-05-15T22:51:41.6077628Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzread.c -o zlib/gzread.o 2021-05-15T22:51:41.7595561Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzwrite.c -o zlib/gzwrite.o 2021-05-15T22:51:41.8813615Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/infback.c -o zlib/infback.o 2021-05-15T22:51:42.1068840Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inffast.c -o zlib/inffast.o 2021-05-15T22:51:42.2207534Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inflate.c -o zlib/inflate.o 2021-05-15T22:51:42.6898212Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inftrees.c -o zlib/inftrees.o 2021-05-15T22:51:42.7808606Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/trees.c -o zlib/trees.o 2021-05-15T22:51:43.0667767Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/uncompr.c -o zlib/uncompr.o 2021-05-15T22:51:43.1042054Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/zutil.c -o zlib/zutil.o 2021-05-15T22:51:43.1532132Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c znzlib/znzlib.c -o znzlib/znzlib.o 2021-05-15T22:51:43.2315619Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c niftilib/nifti1_io.c -o niftilib/nifti1_io.o 2021-05-15T22:51:44.3020220Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c niftilib/nifti2_io.c -o niftilib/nifti2_io.o 2021-05-15T22:51:46.4810890Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o RNifti.so main.o zzz.o zlib/adler32.o zlib/compress.o zlib/crc32.o zlib/deflate.o zlib/gzclose.o zlib/gzlib.o zlib/gzread.o zlib/gzwrite.o zlib/infback.o zlib/inffast.o zlib/inflate.o zlib/inftrees.o zlib/trees.o zlib/uncompr.o zlib/zutil.o znzlib/znzlib.o niftilib/nifti1_io.o niftilib/nifti2_io.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:51:46.6703749Z installing to /home/runner/work/_temp/Library/00LOCK-RNifti/00new/RNifti/libs 2021-05-15T22:51:46.6812250Z ** R 2021-05-15T22:51:46.6881246Z ** inst 2021-05-15T22:51:46.6909010Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:51:47.4101319Z ** help 2021-05-15T22:51:47.4657638Z *** installing help indices 2021-05-15T22:51:47.5050246Z ** building package indices 2021-05-15T22:51:47.7440970Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:51:48.0269646Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:51:48.0507049Z ** testing if installed package can be loaded from final location 2021-05-15T22:51:48.3123053Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:51:48.3133836Z * DONE (RNifti) 2021-05-15T22:51:48.5138011Z * installing *source* package ‘abind’ ... 2021-05-15T22:51:48.5146957Z ** package ‘abind’ successfully unpacked and MD5 sums checked 2021-05-15T22:51:48.5148876Z ** using staged installation 2021-05-15T22:51:48.5245754Z ** R 2021-05-15T22:51:48.5294335Z ** inst 2021-05-15T22:51:48.5303247Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:51:49.0196680Z ** help 2021-05-15T22:51:49.0448290Z *** installing help indices 2021-05-15T22:51:49.0674935Z ** building package indices 2021-05-15T22:51:49.2613173Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:51:49.4167739Z ** testing if installed package can be loaded from final location 2021-05-15T22:51:49.5848469Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:51:49.5855515Z * DONE (abind) 2021-05-15T22:51:49.7746976Z * installing *source* package ‘bitops’ ... 2021-05-15T22:51:49.7754608Z ** package ‘bitops’ successfully unpacked and MD5 sums checked 2021-05-15T22:51:49.7756817Z ** using staged installation 2021-05-15T22:51:49.7845917Z ** libs 2021-05-15T22:51:49.7893839Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bit-ops.c -o bit-ops.o 2021-05-15T22:51:49.9652749Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cksum.c -o cksum.o 2021-05-15T22:51:50.0320652Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:51:50.0798819Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o bitops.so bit-ops.o cksum.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:51:50.0987933Z installing to /home/runner/work/_temp/Library/00LOCK-bitops/00new/bitops/libs 2021-05-15T22:51:50.0994465Z ** R 2021-05-15T22:51:50.1021082Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:51:50.3028488Z ** help 2021-05-15T22:51:50.3249171Z *** installing help indices 2021-05-15T22:51:50.3432326Z ** building package indices 2021-05-15T22:51:50.5295350Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:51:50.6919085Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:51:50.7092267Z ** testing if installed package can be loaded from final location 2021-05-15T22:51:50.8628603Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:51:50.8634188Z * DONE (bitops) 2021-05-15T22:51:51.0539038Z * installing *source* package ‘base64enc’ ... 2021-05-15T22:51:51.0552617Z ** package ‘base64enc’ successfully unpacked and MD5 sums checked 2021-05-15T22:51:51.0556880Z ** using staged installation 2021-05-15T22:51:51.0657353Z ** libs 2021-05-15T22:51:51.0714865Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-15T22:51:51.1720442Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c uriencode.c -o uriencode.o 2021-05-15T22:51:51.2384266Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-15T22:51:51.3043589Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o base64enc.so base64.o uriencode.o utf8.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:51:51.3232444Z installing to /home/runner/work/_temp/Library/00LOCK-base64enc/00new/base64enc/libs 2021-05-15T22:51:51.3245918Z ** R 2021-05-15T22:51:51.3269864Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:51:51.5485249Z ** help 2021-05-15T22:51:51.5694401Z *** installing help indices 2021-05-15T22:51:51.5846536Z ** building package indices 2021-05-15T22:51:51.7647422Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:51:51.9283176Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:51:51.9445749Z ** testing if installed package can be loaded from final location 2021-05-15T22:51:52.1157171Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:51:52.1162837Z * DONE (base64enc) 2021-05-15T22:51:52.5196898Z * installing *source* package ‘matrixStats’ ... 2021-05-15T22:51:52.5280339Z ** package ‘matrixStats’ successfully unpacked and MD5 sums checked 2021-05-15T22:51:52.5282177Z ** using staged installation 2021-05-15T22:51:52.5417539Z ** libs 2021-05-15T22:51:52.5491938Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c 000.init.c -o 000.init.o 2021-05-15T22:51:52.5920430Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c allocMatrix2.c -o allocMatrix2.o 2021-05-15T22:51:52.6758930Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c anyMissing.c -o anyMissing.o 2021-05-15T22:51:52.7784002Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c binCounts.c -o binCounts.o 2021-05-15T22:51:52.8733911Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c binMeans.c -o binMeans.o 2021-05-15T22:51:53.0010817Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colCounts.c -o colCounts.o 2021-05-15T22:51:54.2503287Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colOrderStats.c -o colOrderStats.o 2021-05-15T22:51:54.5917016Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colRanges.c -o colRanges.o 2021-05-15T22:51:55.9515996Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diff2.c -o diff2.o 2021-05-15T22:51:56.1540836Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c indexByRow.c -o indexByRow.o 2021-05-15T22:51:56.2131355Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c logSumExp.c -o logSumExp.o 2021-05-15T22:51:56.4100456Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mean2.c -o mean2.o 2021-05-15T22:51:56.5531308Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c productExpSumLog.c -o productExpSumLog.o 2021-05-15T22:51:56.7087193Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c psortKM.c -o psortKM.o 2021-05-15T22:51:56.7755800Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCounts.c -o rowCounts.o 2021-05-15T22:51:58.1763382Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCummaxs.c -o rowCummaxs.o 2021-05-15T22:51:59.1813423Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCummins.c -o rowCummins.o 2021-05-15T22:52:00.1333254Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCumprods.c -o rowCumprods.o 2021-05-15T22:52:00.9500370Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCumsums.c -o rowCumsums.o 2021-05-15T22:52:01.7409707Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowDiffs.c -o rowDiffs.o 2021-05-15T22:52:03.6304979Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowLogSumExp.c -o rowLogSumExp.o 2021-05-15T22:52:03.7589920Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMads.c -o rowMads.o 2021-05-15T22:52:04.7632321Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMeans2.c -o rowMeans2.o 2021-05-15T22:52:05.3776540Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMedians.c -o rowMedians.o 2021-05-15T22:52:06.3053147Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowOrderStats.c -o rowOrderStats.o 2021-05-15T22:52:06.7407009Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowRanges.c -o rowRanges.o 2021-05-15T22:52:08.2950717Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowRanksWithTies.c -o rowRanksWithTies.o 2021-05-15T22:52:20.4637951Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowSums2.c -o rowSums2.o 2021-05-15T22:52:20.9936558Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowVars.c -o rowVars.o 2021-05-15T22:52:21.6129860Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signTabulate.c -o signTabulate.o 2021-05-15T22:52:21.7376905Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sum2.c -o sum2.o 2021-05-15T22:52:21.8554578Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c validateIndices.c -o validateIndices.o 2021-05-15T22:52:22.0904103Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c weightedMean.c -o weightedMean.o 2021-05-15T22:52:22.2651252Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c weightedMedian.c -o weightedMedian.o 2021-05-15T22:52:22.6873570Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c x_OP_y.c -o x_OP_y.o 2021-05-15T22:53:15.3784423Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o matrixStats.so 000.init.o allocMatrix2.o anyMissing.o binCounts.o binMeans.o colCounts.o colOrderStats.o colRanges.o diff2.o indexByRow.o logSumExp.o mean2.o productExpSumLog.o psortKM.o rowCounts.o rowCummaxs.o rowCummins.o rowCumprods.o rowCumsums.o rowDiffs.o rowLogSumExp.o rowMads.o rowMeans2.o rowMedians.o rowOrderStats.o rowRanges.o rowRanksWithTies.o rowSums2.o rowVars.o signTabulate.o sum2.o validateIndices.o weightedMean.o weightedMedian.o x_OP_y.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:53:15.4635134Z installing to /home/runner/work/_temp/Library/00LOCK-matrixStats/00new/matrixStats/libs 2021-05-15T22:53:15.4736631Z ** R 2021-05-15T22:53:15.4944363Z ** inst 2021-05-15T22:53:15.4987896Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:53:16.7004353Z ** help 2021-05-15T22:53:16.8403963Z *** installing help indices 2021-05-15T22:53:16.9272281Z ** building package indices 2021-05-15T22:53:17.1840920Z ** installing vignettes 2021-05-15T22:53:17.1908330Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:53:17.4057974Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:53:17.4350026Z ** testing if installed package can be loaded from final location 2021-05-15T22:53:17.6547554Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:53:17.6569427Z * DONE (matrixStats) 2021-05-15T22:53:17.8969848Z * installing *source* package ‘tinytex’ ... 2021-05-15T22:53:17.8988824Z ** package ‘tinytex’ successfully unpacked and MD5 sums checked 2021-05-15T22:53:17.8990966Z ** using staged installation 2021-05-15T22:53:17.9212498Z ** R 2021-05-15T22:53:17.9293011Z ** inst 2021-05-15T22:53:17.9301306Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:53:18.6867254Z ** help 2021-05-15T22:53:18.7212063Z *** installing help indices 2021-05-15T22:53:18.7505080Z ** building package indices 2021-05-15T22:53:18.9817905Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:53:19.1887599Z ** testing if installed package can be loaded from final location 2021-05-15T22:53:19.3891721Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:53:19.3906617Z * DONE (tinytex) 2021-05-15T22:53:19.7518716Z * installing *source* package ‘R.oo’ ... 2021-05-15T22:53:19.7592648Z ** package ‘R.oo’ successfully unpacked and MD5 sums checked 2021-05-15T22:53:19.7593474Z ** using staged installation 2021-05-15T22:53:19.7723581Z ** R 2021-05-15T22:53:19.8025996Z ** inst 2021-05-15T22:53:19.8038983Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:53:22.1667140Z ** help 2021-05-15T22:53:22.6115820Z *** installing help indices 2021-05-15T22:53:22.8896107Z ** building package indices 2021-05-15T22:53:23.3292504Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:53:23.5174857Z ** testing if installed package can be loaded from final location 2021-05-15T22:53:23.7738992Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:53:23.7784033Z * DONE (R.oo) 2021-05-15T22:53:24.2980662Z * installing *source* package ‘oro.nifti’ ... 2021-05-15T22:53:24.3226919Z ** package ‘oro.nifti’ successfully unpacked and MD5 sums checked 2021-05-15T22:53:24.3227508Z ** using staged installation 2021-05-15T22:53:24.3384606Z ** R 2021-05-15T22:53:24.3799228Z ** demo 2021-05-15T22:53:24.3804402Z ** inst 2021-05-15T22:53:24.3870306Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:53:30.5968524Z Creating a new generic function for ‘origin’ in package ‘oro.nifti’ 2021-05-15T22:53:30.5970152Z ** help 2021-05-15T22:53:30.9181559Z *** installing help indices 2021-05-15T22:53:31.1398286Z ** building package indices 2021-05-15T22:53:31.5207678Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:53:32.0275309Z ** testing if installed package can be loaded from final location 2021-05-15T22:53:32.6518961Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:53:32.6585762Z * DONE (oro.nifti) 2021-05-15T22:53:32.8871164Z * installing *source* package ‘htmltools’ ... 2021-05-15T22:53:32.8894534Z ** package ‘htmltools’ successfully unpacked and MD5 sums checked 2021-05-15T22:53:32.8896582Z ** using staged installation 2021-05-15T22:53:32.9048235Z ** libs 2021-05-15T22:53:32.9100619Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T22:53:32.9551959Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c template.c -o template.o 2021-05-15T22:53:33.0620379Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o htmltools.so init.o template.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T22:53:33.0834446Z installing to /home/runner/work/_temp/Library/00LOCK-htmltools/00new/htmltools/libs 2021-05-15T22:53:33.0846084Z ** R 2021-05-15T22:53:33.0982152Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:53:34.3100009Z ** help 2021-05-15T22:53:34.3911144Z *** installing help indices 2021-05-15T22:53:34.4552630Z ** building package indices 2021-05-15T22:53:34.7187131Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:53:34.9386791Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T22:53:34.9580585Z ** testing if installed package can be loaded from final location 2021-05-15T22:53:35.1866854Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:53:35.1881064Z * DONE (htmltools) 2021-05-15T22:53:35.7075283Z * installing *source* package ‘R.utils’ ... 2021-05-15T22:53:35.7200110Z ** package ‘R.utils’ successfully unpacked and MD5 sums checked 2021-05-15T22:53:35.7201677Z ** using staged installation 2021-05-15T22:53:35.7345266Z ** R 2021-05-15T22:53:35.8020901Z ** inst 2021-05-15T22:53:35.8033749Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:53:41.6847964Z Warning in setGenericS3.default(name, export = exportGeneric, envir = envir, : 2021-05-15T22:53:41.6849979Z Renamed the preexisting function warnings to warnings.default, which was defined in environment base. 2021-05-15T22:53:41.6852029Z ** help 2021-05-15T22:53:42.5355186Z *** installing help indices 2021-05-15T22:53:42.9975009Z ** building package indices 2021-05-15T22:53:43.7231439Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:53:43.9695820Z ** testing if installed package can be loaded from final location 2021-05-15T22:53:44.3633986Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:53:44.3707704Z * DONE (R.utils) 2021-05-15T22:53:45.2022548Z * installing *source* package ‘rmarkdown’ ... 2021-05-15T22:53:45.2318186Z ** package ‘rmarkdown’ successfully unpacked and MD5 sums checked 2021-05-15T22:53:45.2320359Z ** using staged installation 2021-05-15T22:53:45.2625533Z ** R 2021-05-15T22:53:45.3032422Z ** inst 2021-05-15T22:53:45.3258645Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:53:48.6710713Z ** help 2021-05-15T22:53:48.8737121Z *** installing help indices 2021-05-15T22:53:49.0368391Z *** copying figures 2021-05-15T22:53:49.0371310Z ** building package indices 2021-05-15T22:53:49.3529803Z ** installing vignettes 2021-05-15T22:53:49.3613748Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:53:49.6290758Z ** testing if installed package can be loaded from final location 2021-05-15T22:53:49.9449267Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:53:49.9517990Z * DONE (rmarkdown) 2021-05-15T22:53:50.3443102Z * installing *source* package ‘neurobase’ ... 2021-05-15T22:53:50.3528971Z ** package ‘neurobase’ successfully unpacked and MD5 sums checked 2021-05-15T22:53:50.3530170Z ** using staged installation 2021-05-15T22:53:50.3684532Z ** R 2021-05-15T22:53:50.3895030Z ** inst 2021-05-15T22:53:50.3931301Z ** byte-compile and prepare package for lazy loading 2021-05-15T22:53:52.8222916Z ** help 2021-05-15T22:53:53.0137734Z *** installing help indices 2021-05-15T22:53:53.1431035Z ** building package indices 2021-05-15T22:53:53.4283303Z ** installing vignettes 2021-05-15T22:53:53.4354279Z ** testing if installed package can be loaded from temporary location 2021-05-15T22:53:54.2270607Z ** testing if installed package can be loaded from final location 2021-05-15T22:53:54.9444773Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T22:53:54.9469534Z * DONE (neurobase) 2021-05-15T22:53:54.9609871Z 2021-05-15T22:53:54.9611095Z The downloaded source packages are in 2021-05-15T22:53:54.9612478Z ‘/tmp/Rtmp4J2hnE/downloaded_packages’ 2021-05-15T22:54:08.7638919Z Skipping install of 'rcmdcheck' from a cran remote, the SHA1 (1.3.3) has not changed since last install. 2021-05-15T22:54:08.7639931Z Use `force = TRUE` to force installation 2021-05-15T22:54:08.7649731Z Skipping install of 'markdown' from a cran remote, the SHA1 (1.1) has not changed since last install. 2021-05-15T22:54:08.7650396Z Use `force = TRUE` to force installation 2021-05-15T22:54:08.7812174Z ##[group]Run options(width = 100) 2021-05-15T22:54:08.7812630Z options(width = 100) 2021-05-15T22:54:08.7813151Z pkgs <- installed.packages()[, "Package"] 2021-05-15T22:54:08.7813767Z sessioninfo::session_info(pkgs, include_base = TRUE) 2021-05-15T22:54:08.7821119Z shell: /usr/local/bin/Rscript {0} 2021-05-15T22:54:08.7821539Z env: 2021-05-15T22:54:08.7821998Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:54:08.7822477Z TIC_DEPLOY_KEY: 2021-05-15T22:54:08.7823323Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:54:08.7825026Z GITHUB_PAT: *** 2021-05-15T22:54:08.7825559Z COVERALLS_TOKEN: 2021-05-15T22:54:08.7826004Z continue-on-error: true 2021-05-15T22:54:08.7826957Z VDIFFR_RUN_TESTS: 2021-05-15T22:54:08.7827531Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:54:08.7827929Z TZ: UTC 2021-05-15T22:54:08.7828287Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:54:08.7828699Z NOT_CRAN: true 2021-05-15T22:54:08.7829037Z ##[endgroup] 2021-05-15T22:54:09.2043029Z ─ Session info ─────────────────────────────────────────────────────────────────────────────────── 2021-05-15T22:54:09.2044515Z setting value 2021-05-15T22:54:09.2046254Z version R Under development (unstable) (2021-05-14 r80296) 2021-05-15T22:54:09.2047577Z os Ubuntu 20.04.2 LTS 2021-05-15T22:54:09.2049046Z system x86_64, linux-gnu 2021-05-15T22:54:09.2050139Z ui X11 2021-05-15T22:54:09.2051268Z language (EN) 2021-05-15T22:54:09.2052700Z collate C.UTF-8 2021-05-15T22:54:09.2054183Z ctype C.UTF-8 2021-05-15T22:54:09.2055233Z tz UTC 2021-05-15T22:54:09.2056593Z date 2021-05-15 2021-05-15T22:54:09.2057159Z 2021-05-15T22:54:09.2058816Z ─ Packages ─────────────────────────────────────────────────────────────────────────────────────── 2021-05-15T22:54:09.2060239Z package * version date lib source 2021-05-15T22:54:09.2061950Z abind 1.4-5 2016-07-21 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2063709Z aghast 0.2.1 2021-05-15 [1] Github (muschellij2/aghast@0c3b853) 2021-05-15T22:54:09.2065489Z askpass 1.1 2019-01-13 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2067721Z base * 4.2.0 2021-05-15 [2] local 2021-05-15T22:54:09.2068643Z base64enc 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pkgconfig 2.0.3 2019-09-22 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2134657Z pkgload 1.2.1 2021-04-06 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2135386Z praise 1.0.0 2015-08-11 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2136118Z prettyunits 1.1.1 2020-01-24 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2136873Z processx 3.5.2 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2137600Z ps 1.6.0 2021-02-28 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2138291Z purrr 0.3.4 2020-04-17 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2139038Z R.methodsS3 1.8.1 2020-08-26 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2139764Z R.oo 1.24.0 2020-08-26 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2140726Z R.utils 2.10.1 2020-08-26 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2141510Z R6 2.5.0 2020-10-28 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2142335Z rappdirs 0.3.3 2021-01-31 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2143187Z rcmdcheck 1.3.3 2019-05-07 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2144010Z Rcpp 1.0.6 2021-01-15 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2144839Z rematch2 2.1.2 2020-05-01 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2145672Z remotes 2.3.0 2021-04-01 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2146733Z rex 1.2.0 2020-04-21 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2147563Z rlang 0.4.11 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2148479Z rmarkdown 2.8 2021-05-07 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2149341Z RNifti 1.3.1 2021-05-13 [1] CRAN (R 4.2.0) 2021-05-15T22:54:09.2150164Z roxygen2 7.1.1 2020-06-27 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2151043Z rpart 4.1-15 2019-04-12 [2] CRAN (R 4.2.0) 2021-05-15T22:54:09.2151889Z rprojroot 2.0.2 2020-11-15 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2152645Z rstudioapi 0.13 2020-11-12 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2153401Z rversions 2.0.2 2020-05-25 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2154152Z sessioninfo 1.1.1 2018-11-05 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2155140Z spatial 7.3-14 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-15T22:54:09.2156051Z splines 4.2.0 2021-05-15 [2] local 2021-05-15T22:54:09.2156878Z stats * 4.2.0 2021-05-15 [2] local 2021-05-15T22:54:09.2157690Z stats4 4.2.0 2021-05-15 [2] local 2021-05-15T22:54:09.2158507Z stringi 1.6.1 2021-05-10 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2159342Z stringr 1.4.0 2019-02-10 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2160164Z survival 3.2-11 2021-04-26 [2] CRAN (R 4.2.0) 2021-05-15T22:54:09.2160987Z sys 3.4 2020-07-23 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2161866Z sysreqs 1.0.0.9000 2021-05-15 [1] Github (r-hub/sysreqs@f068afa) 2021-05-15T22:54:09.2162726Z tcltk 4.2.0 2021-05-15 [2] local 2021-05-15T22:54:09.2163556Z testthat 3.0.2 2021-02-14 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2164386Z tibble 3.1.1 2021-04-18 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2165253Z tic 0.10.0 2021-05-15 [1] Github (ropensci/tic@3b4dfb8) 2021-05-15T22:54:09.2166107Z tidyr 1.1.3 2021-03-03 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2167774Z tidyselect 1.1.1 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2168759Z tinytex 0.31 2021-03-30 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2169633Z tools 4.2.0 2021-05-15 [2] local 2021-05-15T22:54:09.2170523Z usethis 2.0.1 2021-02-10 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2171390Z utf8 1.2.1 2021-03-12 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2172261Z utils * 4.2.0 2021-05-15 [2] local 2021-05-15T22:54:09.2173149Z vctrs 0.3.8 2021-04-29 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2174023Z waldo 0.2.5 2021-03-08 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2174909Z whisker 0.4 2019-08-28 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2175787Z withr 2.4.2 2021-04-18 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2176657Z xfun 0.23 2021-05-15 [1] CRAN (R 4.2.0) 2021-05-15T22:54:09.2177509Z xml2 1.3.2 2020-04-23 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2178383Z xopen 1.0.0 2018-09-17 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2179352Z yaml 2.2.1 2020-02-01 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2180143Z zip 2.1.1 2020-08-27 [1] RSPM (R 4.2.0) 2021-05-15T22:54:09.2180471Z 2021-05-15T22:54:09.2180965Z [1] /home/runner/work/_temp/Library 2021-05-15T22:54:09.2181522Z [2] /opt/R/devel/lib/R/library 2021-05-15T22:54:09.2216452Z ##[group]Run Rscript -e 'tic::script()' 2021-05-15T22:54:09.2217031Z Rscript -e 'tic::script()' 2021-05-15T22:54:09.2217479Z ls -l check 2021-05-15T22:54:09.2258849Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-05-15T22:54:09.2259300Z env: 2021-05-15T22:54:09.2259719Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:54:09.2260148Z TIC_DEPLOY_KEY: 2021-05-15T22:54:09.2260879Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:54:09.2262290Z GITHUB_PAT: *** 2021-05-15T22:54:09.2262646Z COVERALLS_TOKEN: 2021-05-15T22:54:09.2263089Z continue-on-error: true 2021-05-15T22:54:09.2263505Z VDIFFR_RUN_TESTS: 2021-05-15T22:54:09.2263953Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:54:09.2264345Z TZ: UTC 2021-05-15T22:54:09.2264803Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:54:09.2265184Z NOT_CRAN: true 2021-05-15T22:54:09.2265520Z ##[endgroup] 2021-05-15T22:54:09.4717310Z ✔ Loading tic stage configuration from tic.R 2021-05-15T22:54:09.5891016Z Running script: step_rcmdcheck(warnings_are_errors = NULL, notes_are_errors = NULL, 2021-05-15T22:54:09.5892538Z args = args, build_args = NULL, error_on = error_on, repos = repo_default(), 2021-05-15T22:54:09.5893603Z timeout = Inf, check_dir = "check") 2021-05-15T22:54:09.6449802Z ── R CMD build ───────────────────────────────────────────────────────────────── 2021-05-15T22:54:09.8543485Z * checking for file ‘.../DESCRIPTION’ ... OK 2021-05-15T22:54:09.9541466Z * preparing ‘sri24’: 2021-05-15T22:54:09.9637678Z * checking DESCRIPTION meta-information ... OK 2021-05-15T22:54:10.0473809Z * installing the package to build vignettes 2021-05-15T22:54:11.9013891Z * creating vignettes ... OK 2021-05-15T22:54:11.9417470Z * checking for LF line-endings in source and make files and shell scripts 2021-05-15T22:54:11.9420571Z * checking for empty or unneeded directories 2021-05-15T22:54:11.9427304Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-15T22:54:11.9514131Z * building ‘sri24_0.1.2.tar.gz’ 2021-05-15T22:54:15.4394622Z 2021-05-15T22:54:16.4383204Z ── R CMD check ───────────────────────────────────────────────────────────────── 2021-05-15T22:54:16.6340854Z * using log directory ‘/home/runner/work/sri24/sri24/check/sri24.Rcheck’ 2021-05-15T22:54:16.6342170Z * using R Under development (unstable) (2021-05-14 r80296) 2021-05-15T22:54:16.6343064Z * using platform: x86_64-pc-linux-gnu (64-bit) 2021-05-15T22:54:16.6343818Z * using session charset: UTF-8 2021-05-15T22:54:18.4988999Z * using option ‘--as-cran’ 2021-05-15T22:54:18.4999142Z * checking for file ‘sri24/DESCRIPTION’ ... OK 2021-05-15T22:54:18.5011248Z * checking extension type ... Package 2021-05-15T22:54:18.5013626Z * this is package ‘sri24’ version ‘0.1.2’ 2021-05-15T22:54:18.5015487Z * package encoding: UTF-8 2021-05-15T22:54:18.5034612Z * checking package namespace information ... OK 2021-05-15T22:54:33.8179701Z * checking package dependencies ... OK 2021-05-15T22:54:33.8194904Z * checking if this is a source package ... OK 2021-05-15T22:54:33.8195646Z * checking if there is a namespace ... OK 2021-05-15T22:54:34.0475445Z * checking for executable files ... OK 2021-05-15T22:54:34.0491510Z * checking for hidden files and directories ... OK 2021-05-15T22:54:34.0492782Z * checking for portable file names ... OK 2021-05-15T22:54:34.0501382Z * checking for sufficient/correct file permissions ... OK 2021-05-15T22:54:34.0518467Z * checking serialization versions ... OK 2021-05-15T22:54:38.7815936Z * checking whether package ‘sri24’ can be installed ... OK 2021-05-15T22:54:38.7867278Z * checking installed package size ... NOTE 2021-05-15T22:54:38.7868270Z installed size is 56.8Mb 2021-05-15T22:54:38.7888398Z sub-directories of 1Mb or more: 2021-05-15T22:54:38.7889620Z extdata 56.7Mb 2021-05-15T22:54:38.8590273Z * checking package directory ... OK 2021-05-15T22:54:38.8591424Z * checking for future file timestamps ... OK 2021-05-15T22:54:38.8594578Z * checking ‘build’ directory ... OK 2021-05-15T22:54:39.0370501Z * checking DESCRIPTION meta-information ... NOTE 2021-05-15T22:54:39.0372273Z Deprecated license: CC BY-SA 3.0 + file LICENSE 2021-05-15T22:54:39.0457789Z * checking top-level files ... OK 2021-05-15T22:54:39.0459875Z * checking for left-over files ... OK 2021-05-15T22:54:39.2115203Z * checking index information ... OK 2021-05-15T22:54:39.4711546Z * checking package subdirectories ... OK 2021-05-15T22:54:39.5204213Z * checking R files for non-ASCII characters ... OK 2021-05-15T22:54:39.5735855Z * checking R files for syntax errors ... OK 2021-05-15T22:54:39.7517245Z * checking whether the package can be loaded ... OK 2021-05-15T22:54:39.8191984Z * checking whether the package can be loaded with stated dependencies ... OK 2021-05-15T22:54:39.8870776Z * checking whether the package can be unloaded cleanly ... OK 2021-05-15T22:54:39.9570468Z * checking whether the namespace can be loaded with stated dependencies ... OK 2021-05-15T22:54:40.1224197Z * checking whether the namespace can be unloaded cleanly ... OK 2021-05-15T22:54:40.2983357Z * checking loading without being on the library search path ... OK 2021-05-15T22:54:40.3763473Z * checking dependencies in R code ... OK 2021-05-15T22:54:40.8971241Z * checking S3 generic/method consistency ... OK 2021-05-15T22:54:41.0007999Z * checking replacement functions ... OK 2021-05-15T22:54:41.1227826Z * checking foreign function calls ... OK 2021-05-15T22:54:43.0978057Z * checking R code for possible problems ... OK 2021-05-15T22:54:43.2765053Z * checking Rd files ... OK 2021-05-15T22:54:43.3216689Z * checking Rd metadata ... OK 2021-05-15T22:54:43.3773492Z * checking Rd line widths ... OK 2021-05-15T22:54:43.4557344Z * checking Rd cross-references ... OK 2021-05-15T22:54:43.5598913Z * checking for missing documentation entries ... OK 2021-05-15T22:54:43.8549282Z * checking for code/documentation mismatches ... OK 2021-05-15T22:54:44.4437529Z * checking Rd \usage sections ... OK 2021-05-15T22:54:44.5019804Z * checking Rd contents ... OK 2021-05-15T22:54:44.5787478Z * checking for unstated dependencies in examples ... OK 2021-05-15T22:54:44.5988563Z * checking installed files from ‘inst/doc’ ... OK 2021-05-15T22:54:44.6018814Z * checking files in ‘vignettes’ ... OK 2021-05-15T22:54:47.5813686Z * checking examples ... OK 2021-05-15T22:54:47.6450878Z * checking for unstated dependencies in ‘tests’ ... OK 2021-05-15T22:54:47.7988232Z * checking tests ... 2021-05-15T22:54:48.1926945Z Running ‘testthat.R’ 2021-05-15T22:54:48.1969288Z OK 2021-05-15T22:54:48.3570320Z * checking for unstated dependencies in vignettes ... OK 2021-05-15T22:54:48.4367936Z * checking package vignettes in ‘inst/doc’ ... NOTE 2021-05-15T22:54:48.4370706Z Package vignette with placeholder title ‘Vignette Title’: 2021-05-15T22:54:48.4372760Z ‘bad-vignette.Rmd’ 2021-05-15T22:54:49.1424652Z * checking re-building of vignette outputs ... OK 2021-05-15T22:54:50.7747875Z * checking PDF version of manual ... OK 2021-05-15T22:54:50.7768536Z * checking for non-standard things in the check directory ... OK 2021-05-15T22:54:50.7769841Z * checking for detritus in the temp directory ... OK 2021-05-15T22:54:50.7770562Z * DONE 2021-05-15T22:54:50.7770996Z 2021-05-15T22:54:50.7771582Z Status: 3 NOTEs 2021-05-15T22:54:50.7772137Z See 2021-05-15T22:54:50.7773228Z ‘/home/runner/work/sri24/sri24/check/sri24.Rcheck/00check.log’ 2021-05-15T22:54:50.7774025Z for details. 2021-05-15T22:54:50.7774481Z 2021-05-15T22:54:50.7774889Z 2021-05-15T22:54:50.8638235Z ── R CMD check results ──────────────────────────────────────── sri24 0.1.2 ──── 2021-05-15T22:54:50.8655430Z Duration: 35.3s 2021-05-15T22:54:50.8656062Z 2021-05-15T22:54:50.8682456Z ❯ checking installed package size ... NOTE 2021-05-15T22:54:50.8683257Z installed size is 56.8Mb 2021-05-15T22:54:50.8684149Z sub-directories of 1Mb or more: 2021-05-15T22:54:50.8684837Z extdata 56.7Mb 2021-05-15T22:54:50.8685256Z 2021-05-15T22:54:50.8690731Z ❯ checking DESCRIPTION meta-information ... NOTE 2021-05-15T22:54:50.8691987Z Deprecated license: CC BY-SA 3.0 + file LICENSE 2021-05-15T22:54:50.8692488Z 2021-05-15T22:54:50.8698588Z ❯ checking package vignettes in ‘inst/doc’ ... NOTE 2021-05-15T22:54:50.8699825Z Package vignette with placeholder title ‘Vignette Title’: 2021-05-15T22:54:50.8700810Z ‘bad-vignette.Rmd’ 2021-05-15T22:54:50.8701290Z 2021-05-15T22:54:50.8708110Z 0 errors ✔ | 0 warnings ✔ | 3 notes ✖ 2021-05-15T22:54:50.8804788Z total 115040 2021-05-15T22:54:50.8806260Z drwxr-xr-x 6 runner docker 4096 May 15 22:54 sri24.Rcheck 2021-05-15T22:54:50.8807321Z -rw-r--r-- 1 runner docker 58888729 May 15 22:54 sri24_0.1.2.tar.gz 2021-05-15T22:54:50.8808511Z -rw-r--r-- 1 runner docker 58900138 May 15 22:54 sri24_0.1.2_R_x86_64-pc-linux-gnu.tar.gz 2021-05-15T22:54:50.8842769Z ##[group]Run find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-05-15T22:54:50.8843697Z find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-05-15T22:54:50.8885766Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-05-15T22:54:50.8886220Z env: 2021-05-15T22:54:50.8886632Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:54:50.8887062Z TIC_DEPLOY_KEY: 2021-05-15T22:54:50.8887791Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:54:50.8889371Z GITHUB_PAT: *** 2021-05-15T22:54:50.8889726Z COVERALLS_TOKEN: 2021-05-15T22:54:50.8890171Z continue-on-error: true 2021-05-15T22:54:50.8890591Z VDIFFR_RUN_TESTS: 2021-05-15T22:54:50.8891038Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:54:50.8891445Z TZ: UTC 2021-05-15T22:54:50.8891786Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:54:50.8892165Z NOT_CRAN: true 2021-05-15T22:54:50.8892498Z ##[endgroup] 2021-05-15T22:54:50.8985111Z 2021-05-15T22:54:50.8987110Z R Under development (unstable) (2021-05-14 r80296) -- "Unsuffered Consequences" 2021-05-15T22:54:50.8988498Z Copyright (C) 2021 The R Foundation for Statistical Computing 2021-05-15T22:54:50.8989627Z Platform: x86_64-pc-linux-gnu (64-bit) 2021-05-15T22:54:50.8990195Z 2021-05-15T22:54:50.8991502Z R is free software and comes with ABSOLUTELY NO WARRANTY. 2021-05-15T22:54:50.8992511Z You are welcome to redistribute it under certain conditions. 2021-05-15T22:54:50.8993710Z Type 'license()' or 'licence()' for distribution details. 2021-05-15T22:54:50.8994272Z 2021-05-15T22:54:50.8995000Z R is a collaborative project with many contributors. 2021-05-15T22:54:50.8996070Z Type 'contributors()' for more information and 2021-05-15T22:54:50.8997351Z 'citation()' on how to cite R or R packages in publications. 2021-05-15T22:54:50.8997935Z 2021-05-15T22:54:50.8998877Z Type 'demo()' for some demos, 'help()' for on-line help, or 2021-05-15T22:54:50.9000572Z 'help.start()' for an HTML browser interface to help. 2021-05-15T22:54:50.9001423Z Type 'q()' to quit R. 2021-05-15T22:54:50.9001734Z 2021-05-15T22:54:50.9002316Z > library(testthat) 2021-05-15T22:54:50.9002952Z > library(sri24) 2021-05-15T22:54:50.9003354Z > 2021-05-15T22:54:50.9003781Z > test_check("sri24") 2021-05-15T22:54:50.9004745Z [ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ] 2021-05-15T22:54:50.9005169Z > 2021-05-15T22:54:50.9005595Z > proc.time() 2021-05-15T22:54:50.9006122Z user system elapsed 2021-05-15T22:54:50.9006665Z 0.337 0.034 0.360 2021-05-15T22:54:50.9040421Z ##[group]Run Rscript -e "tic::before_deploy()" 2021-05-15T22:54:50.9041033Z Rscript -e "tic::before_deploy()" 2021-05-15T22:54:50.9077556Z shell: /usr/bin/bash -e {0} 2021-05-15T22:54:50.9077916Z env: 2021-05-15T22:54:50.9078315Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:54:50.9078750Z TIC_DEPLOY_KEY: 2021-05-15T22:54:50.9079481Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:54:50.9080662Z GITHUB_PAT: *** 2021-05-15T22:54:50.9081035Z COVERALLS_TOKEN: 2021-05-15T22:54:50.9081461Z continue-on-error: true 2021-05-15T22:54:50.9081901Z VDIFFR_RUN_TESTS: 2021-05-15T22:54:50.9082332Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:54:50.9082742Z TZ: UTC 2021-05-15T22:54:50.9083088Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:54:50.9083467Z NOT_CRAN: true 2021-05-15T22:54:50.9083797Z ##[endgroup] 2021-05-15T22:54:51.1552351Z ✔ Loading tic stage configuration from tic.R 2021-05-15T22:54:51.2797521Z ##[group]Run actions/upload-release-asset@v1.0.1 2021-05-15T22:54:51.2798116Z with: 2021-05-15T22:54:51.2798967Z upload_url: https://uploads.github.com/repos/neuroconductor/sri24/releases/43005506/assets{?name,label} 2021-05-15T22:54:51.2800014Z asset_path: check/sri24_0.1.2_R_x86_64-pc-linux-gnu.tar.gz 2021-05-15T22:54:51.2800701Z asset_name: sri24_0.1.2_R_x86_64-pc-linux-gnu_R4.1.tar.gz 2021-05-15T22:54:51.2801377Z asset_content_type: application/octet-stream 2021-05-15T22:54:51.2801881Z env: 2021-05-15T22:54:51.2802337Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:54:51.2802937Z TIC_DEPLOY_KEY: 2021-05-15T22:54:51.2803765Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:54:51.2805344Z GITHUB_PAT: *** 2021-05-15T22:54:51.2805754Z COVERALLS_TOKEN: 2021-05-15T22:54:51.2806260Z continue-on-error: true 2021-05-15T22:54:51.2806735Z VDIFFR_RUN_TESTS: 2021-05-15T22:54:51.2807268Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:54:51.2807729Z TZ: UTC 2021-05-15T22:54:51.2808137Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:54:51.2808552Z NOT_CRAN: true 2021-05-15T22:54:51.2809494Z GITHUB_TOKEN: *** 2021-05-15T22:54:51.2809884Z ##[endgroup] 2021-05-15T22:54:52.8008803Z ##[group]Run Rscript -e "tic::deploy()" 2021-05-15T22:54:52.8009372Z Rscript -e "tic::deploy()" 2021-05-15T22:54:52.8058792Z shell: /usr/bin/bash -e {0} 2021-05-15T22:54:52.8059189Z env: 2021-05-15T22:54:52.8059654Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:54:52.8060158Z TIC_DEPLOY_KEY: 2021-05-15T22:54:52.8061044Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:54:52.8062459Z GITHUB_PAT: *** 2021-05-15T22:54:52.8062818Z COVERALLS_TOKEN: 2021-05-15T22:54:52.8063269Z continue-on-error: true 2021-05-15T22:54:52.8063691Z VDIFFR_RUN_TESTS: 2021-05-15T22:54:52.8064136Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:54:52.8064527Z TZ: UTC 2021-05-15T22:54:52.8064886Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:54:52.8065269Z NOT_CRAN: true 2021-05-15T22:54:52.8065604Z ##[endgroup] 2021-05-15T22:54:53.0722617Z ✔ Loading tic stage configuration from tic.R 2021-05-15T22:54:53.1955380Z ##[group]Run Rscript -e "tic::after_deploy()" 2021-05-15T22:54:53.1956043Z Rscript -e "tic::after_deploy()" 2021-05-15T22:54:53.2003216Z shell: /usr/bin/bash -e {0} 2021-05-15T22:54:53.2003648Z env: 2021-05-15T22:54:53.2004147Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T22:54:53.2004680Z TIC_DEPLOY_KEY: 2021-05-15T22:54:53.2005583Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T22:54:53.2007534Z GITHUB_PAT: *** 2021-05-15T22:54:53.2007976Z COVERALLS_TOKEN: 2021-05-15T22:54:53.2008521Z continue-on-error: true 2021-05-15T22:54:53.2009044Z VDIFFR_RUN_TESTS: 2021-05-15T22:54:53.2009591Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T22:54:53.2010075Z TZ: UTC 2021-05-15T22:54:53.2010520Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T22:54:53.2010983Z NOT_CRAN: true 2021-05-15T22:54:53.2011394Z ##[endgroup] 2021-05-15T22:54:53.4641271Z ✔ Loading tic stage configuration from tic.R 2021-05-15T22:54:53.7361026Z Post job cleanup. 2021-05-15T22:54:53.7779507Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-05-15T22:54:53.7889113Z Post job cleanup. 2021-05-15T22:54:53.8774975Z [command]/usr/bin/git version 2021-05-15T22:54:53.8840670Z git version 2.31.1 2021-05-15T22:54:53.8881707Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-05-15T22:54:53.8936689Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-05-15T22:54:53.9209616Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-05-15T22:54:53.9250070Z http.https://github.com/.extraheader 2021-05-15T22:54:53.9261250Z [command]/usr/bin/git config --local --unset-all http.https://github.com/.extraheader 2021-05-15T22:54:53.9306394Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-05-15T22:54:53.9599788Z Cleaning up orphan processes