2021-05-15T13:43:01.7793447Z ##[section]Starting: Request a runner to run this job 2021-05-15T13:43:02.1373968Z Can't find any online and idle self-hosted runner in current repository that matches the required labels: 'ubuntu-20.04' 2021-05-15T13:43:02.2075211Z Can't find any online and idle self-hosted runner in current repository's organization/enterprise account that matches the required labels: 'ubuntu-20.04' 2021-05-15T13:43:02.2671843Z Found online and idle hosted runner in current repository's enterprise account that matches the required labels: 'ubuntu-20.04' 2021-05-15T13:43:02.3629395Z ##[section]Finishing: Request a runner to run this job 2021-05-15T13:43:07.3671689Z Current runner version: '2.278.0' 2021-05-15T13:43:07.3697307Z ##[group]Operating System 2021-05-15T13:43:07.3698195Z Ubuntu 2021-05-15T13:43:07.3698592Z 20.04.2 2021-05-15T13:43:07.3699021Z LTS 2021-05-15T13:43:07.3699513Z ##[endgroup] 2021-05-15T13:43:07.3700025Z ##[group]Virtual Environment 2021-05-15T13:43:07.3700661Z Environment: ubuntu-20.04 2021-05-15T13:43:07.3701189Z Version: 20210510.0 2021-05-15T13:43:07.3702160Z Included Software: https://github.com/actions/virtual-environments/blob/ubuntu20/20210510.0/images/linux/Ubuntu2004-README.md 2021-05-15T13:43:07.3703440Z Image Release: https://github.com/actions/virtual-environments/releases/tag/ubuntu20%2F20210510.0 2021-05-15T13:43:07.3704303Z ##[endgroup] 2021-05-15T13:43:07.3706075Z ##[group]GITHUB_TOKEN Permissions 2021-05-15T13:43:07.3707194Z Actions: write 2021-05-15T13:43:07.3707733Z Checks: write 2021-05-15T13:43:07.3708194Z Contents: write 2021-05-15T13:43:07.3708740Z Deployments: write 2021-05-15T13:43:07.3709340Z Issues: write 2021-05-15T13:43:07.3709852Z Metadata: read 2021-05-15T13:43:07.3710396Z Packages: write 2021-05-15T13:43:07.3710896Z PullRequests: write 2021-05-15T13:43:07.3711516Z RepositoryProjects: write 2021-05-15T13:43:07.3712097Z SecurityEvents: write 2021-05-15T13:43:07.3712642Z Statuses: write 2021-05-15T13:43:07.3713195Z ##[endgroup] 2021-05-15T13:43:07.3716031Z Prepare workflow directory 2021-05-15T13:43:07.4661656Z Prepare all required actions 2021-05-15T13:43:07.4671886Z Getting action download info 2021-05-15T13:43:07.8552081Z Download action repository 'actions/checkout@v2' 2021-05-15T13:43:09.5576281Z Download action repository 'r-lib/actions@master' 2021-05-15T13:43:10.0646517Z Download action repository 'adigherman/actions@master' 2021-05-15T13:43:11.5593498Z Download action repository 'msys2/setup-msys2@v2' 2021-05-15T13:43:11.7158950Z Download action repository 'actions/cache@v1' 2021-05-15T13:43:11.8643670Z Download action repository 'actions/upload-artifact@master' 2021-05-15T13:43:12.1005277Z Download action repository 'actions/upload-release-asset@v1.0.1' 2021-05-15T13:43:12.4188056Z ##[group]Run actions/checkout@v2 2021-05-15T13:43:12.4188590Z with: 2021-05-15T13:43:12.4189040Z repository: neuroconductor/dcmtk 2021-05-15T13:43:12.4189984Z token: *** 2021-05-15T13:43:12.4190336Z ssh-strict: true 2021-05-15T13:43:12.4190814Z persist-credentials: true 2021-05-15T13:43:12.4191253Z clean: true 2021-05-15T13:43:12.4191622Z fetch-depth: 1 2021-05-15T13:43:12.4191974Z lfs: false 2021-05-15T13:43:12.4192335Z submodules: false 2021-05-15T13:43:12.4192677Z env: 2021-05-15T13:43:12.4193089Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T13:43:12.4193514Z TIC_DEPLOY_KEY: 2021-05-15T13:43:12.4194274Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T13:43:12.4195403Z GITHUB_PAT: *** 2021-05-15T13:43:12.4195765Z COVERALLS_TOKEN: 2021-05-15T13:43:12.4196214Z continue-on-error: true 2021-05-15T13:43:12.4196642Z VDIFFR_RUN_TESTS: 2021-05-15T13:43:12.4197010Z ##[endgroup] 2021-05-15T13:43:12.6660054Z Syncing repository: neuroconductor/dcmtk 2021-05-15T13:43:12.6660876Z ##[group]Getting Git version info 2021-05-15T13:43:12.6661889Z Working directory is '/home/runner/work/dcmtk/dcmtk' 2021-05-15T13:43:12.6704605Z [command]/usr/bin/git version 2021-05-15T13:43:12.6880684Z git version 2.31.1 2021-05-15T13:43:12.6899881Z ##[endgroup] 2021-05-15T13:43:12.6905642Z Deleting the contents of '/home/runner/work/dcmtk/dcmtk' 2021-05-15T13:43:12.6909273Z ##[group]Initializing the repository 2021-05-15T13:43:12.6913104Z [command]/usr/bin/git init /home/runner/work/dcmtk/dcmtk 2021-05-15T13:43:12.7018062Z hint: Using 'master' as the name for the initial branch. This default branch name 2021-05-15T13:43:12.7019019Z hint: is subject to change. To configure the initial branch name to use in all 2021-05-15T13:43:12.7019778Z hint: of your new repositories, which will suppress this warning, call: 2021-05-15T13:43:12.7020303Z hint: 2021-05-15T13:43:12.7020975Z hint: git config --global init.defaultBranch 2021-05-15T13:43:12.7021692Z hint: 2021-05-15T13:43:12.7022355Z hint: Names commonly chosen instead of 'master' are 'main', 'trunk' and 2021-05-15T13:43:12.7023244Z hint: 'development'. The just-created branch can be renamed via this command: 2021-05-15T13:43:12.7023803Z hint: 2021-05-15T13:43:12.7024261Z hint: git branch -m 2021-05-15T13:43:12.7032941Z Initialized empty Git repository in /home/runner/work/dcmtk/dcmtk/.git/ 2021-05-15T13:43:12.7042356Z [command]/usr/bin/git remote add origin https://github.com/neuroconductor/dcmtk 2021-05-15T13:43:12.7097291Z ##[endgroup] 2021-05-15T13:43:12.7098270Z ##[group]Disabling automatic garbage collection 2021-05-15T13:43:12.7101916Z [command]/usr/bin/git config --local gc.auto 0 2021-05-15T13:43:12.7143990Z ##[endgroup] 2021-05-15T13:43:12.7148462Z ##[group]Setting up auth 2021-05-15T13:43:12.7154915Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-05-15T13:43:12.7198747Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-05-15T13:43:12.7651683Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-05-15T13:43:12.7704707Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-05-15T13:43:12.7940356Z [command]/usr/bin/git config --local http.https://github.com/.extraheader AUTHORIZATION: basic *** 2021-05-15T13:43:12.7992715Z ##[endgroup] 2021-05-15T13:43:12.7993616Z ##[group]Fetching the repository 2021-05-15T13:43:12.8001656Z [command]/usr/bin/git -c protocol.version=2 fetch --no-tags --prune --progress --no-recurse-submodules --depth=1 origin +491cbcea629724ddf29fcf21643abe277a816723:refs/tags/0.6.8.1.s 2021-05-15T13:43:13.0175069Z remote: Enumerating objects: 93, done. 2021-05-15T13:43:13.0181375Z remote: Counting objects: 1% (1/93) 2021-05-15T13:43:13.0184924Z remote: Counting objects: 2% (2/93) 2021-05-15T13:43:13.0188401Z remote: Counting objects: 3% (3/93) 2021-05-15T13:43:13.0191872Z remote: Counting objects: 4% (4/93) 2021-05-15T13:43:13.0194959Z remote: Counting objects: 5% (5/93) 2021-05-15T13:43:13.0198209Z remote: Counting objects: 6% (6/93) 2021-05-15T13:43:13.0201276Z remote: Counting objects: 7% (7/93) 2021-05-15T13:43:13.0205171Z remote: Counting objects: 8% (8/93) 2021-05-15T13:43:13.0206002Z remote: Counting objects: 9% (9/93) 2021-05-15T13:43:13.0222260Z remote: Counting objects: 10% (10/93) 2021-05-15T13:43:13.0224231Z remote: Counting objects: 11% (11/93) 2021-05-15T13:43:13.0224892Z remote: Counting objects: 12% (12/93) 2021-05-15T13:43:13.0225469Z remote: Counting objects: 13% (13/93) 2021-05-15T13:43:13.0260882Z remote: Counting objects: 15% (14/93) 2021-05-15T13:43:13.0262210Z remote: Counting objects: 16% (15/93) 2021-05-15T13:43:13.0262789Z remote: Counting objects: 17% (16/93) 2021-05-15T13:43:13.0263328Z remote: Counting objects: 18% (17/93) 2021-05-15T13:43:13.0263879Z remote: Counting objects: 19% (18/93) 2021-05-15T13:43:13.0264441Z remote: Counting objects: 20% (19/93) 2021-05-15T13:43:13.0264985Z remote: Counting objects: 21% (20/93) 2021-05-15T13:43:13.0265513Z remote: Counting objects: 22% (21/93) 2021-05-15T13:43:13.0266067Z remote: Counting objects: 23% (22/93) 2021-05-15T13:43:13.0266602Z remote: Counting objects: 24% (23/93) 2021-05-15T13:43:13.0267172Z remote: Counting objects: 25% (24/93) 2021-05-15T13:43:13.0267729Z remote: Counting objects: 26% (25/93) 2021-05-15T13:43:13.0268221Z remote: Counting objects: 27% (26/93) 2021-05-15T13:43:13.0268738Z remote: Counting objects: 29% (27/93) 2021-05-15T13:43:13.0269496Z remote: Counting objects: 30% (28/93) 2021-05-15T13:43:13.0269976Z remote: Counting objects: 31% (29/93) 2021-05-15T13:43:13.0270442Z remote: Counting objects: 32% (30/93) 2021-05-15T13:43:13.0270915Z remote: Counting objects: 33% (31/93) 2021-05-15T13:43:13.0271379Z remote: Counting objects: 34% (32/93) 2021-05-15T13:43:13.0271854Z remote: Counting objects: 35% (33/93) 2021-05-15T13:43:13.0272332Z remote: Counting objects: 36% (34/93) 2021-05-15T13:43:13.0272795Z remote: Counting objects: 37% (35/93) 2021-05-15T13:43:13.0273266Z remote: Counting objects: 38% (36/93) 2021-05-15T13:43:13.0273727Z remote: Counting objects: 39% (37/93) 2021-05-15T13:43:13.0274201Z remote: Counting objects: 40% (38/93) 2021-05-15T13:43:13.0274672Z remote: Counting objects: 41% (39/93) 2021-05-15T13:43:13.0275150Z remote: Counting objects: 43% (40/93) 2021-05-15T13:43:13.0275616Z remote: Counting objects: 44% (41/93) 2021-05-15T13:43:13.0276091Z remote: Counting objects: 45% (42/93) 2021-05-15T13:43:13.0276571Z remote: Counting objects: 46% (43/93) 2021-05-15T13:43:13.0277028Z remote: Counting objects: 47% (44/93) 2021-05-15T13:43:13.0277505Z remote: Counting objects: 48% (45/93) 2021-05-15T13:43:13.0277970Z remote: Counting objects: 49% (46/93) 2021-05-15T13:43:13.0278446Z remote: Counting objects: 50% (47/93) 2021-05-15T13:43:13.0278906Z remote: Counting objects: 51% (48/93) 2021-05-15T13:43:13.0279378Z remote: Counting objects: 52% (49/93) 2021-05-15T13:43:13.0279839Z remote: Counting objects: 53% (50/93) 2021-05-15T13:43:13.0280312Z remote: Counting objects: 54% (51/93) 2021-05-15T13:43:13.0280804Z remote: Counting objects: 55% (52/93) 2021-05-15T13:43:13.0281268Z remote: Counting objects: 56% (53/93) 2021-05-15T13:43:13.0281744Z remote: Counting objects: 58% (54/93) 2021-05-15T13:43:13.0283839Z remote: Counting objects: 59% (55/93) 2021-05-15T13:43:13.0284377Z remote: Counting objects: 60% (56/93) 2021-05-15T13:43:13.0284845Z remote: Counting objects: 61% (57/93) 2021-05-15T13:43:13.0285324Z remote: Counting objects: 62% (58/93) 2021-05-15T13:43:13.0285787Z remote: Counting objects: 63% (59/93) 2021-05-15T13:43:13.0286262Z remote: Counting objects: 64% (60/93) 2021-05-15T13:43:13.0286722Z remote: Counting objects: 65% (61/93) 2021-05-15T13:43:13.0287199Z remote: Counting objects: 66% (62/93) 2021-05-15T13:43:13.0289282Z remote: Counting objects: 67% (63/93) 2021-05-15T13:43:13.0289780Z remote: Counting objects: 68% (64/93) 2021-05-15T13:43:13.0290329Z remote: Counting objects: 69% (65/93) 2021-05-15T13:43:13.0290810Z remote: Counting objects: 70% (66/93) 2021-05-15T13:43:13.0291273Z remote: Counting objects: 72% (67/93) 2021-05-15T13:43:13.0291765Z remote: Counting objects: 73% (68/93) 2021-05-15T13:43:13.0292268Z remote: Counting objects: 74% (69/93) 2021-05-15T13:43:13.0292743Z remote: Counting objects: 75% (70/93) 2021-05-15T13:43:13.0293207Z remote: Counting objects: 76% (71/93) 2021-05-15T13:43:13.0293680Z remote: Counting objects: 77% (72/93) 2021-05-15T13:43:13.0294149Z remote: Counting objects: 78% (73/93) 2021-05-15T13:43:13.0294628Z remote: Counting objects: 79% (74/93) 2021-05-15T13:43:13.0295108Z remote: Counting objects: 80% (75/93) 2021-05-15T13:43:13.0295574Z remote: Counting objects: 81% (76/93) 2021-05-15T13:43:13.0296051Z remote: Counting objects: 82% (77/93) 2021-05-15T13:43:13.0296518Z remote: Counting objects: 83% (78/93) 2021-05-15T13:43:13.0297985Z remote: Counting objects: 84% (79/93) 2021-05-15T13:43:13.0298469Z remote: Counting objects: 86% (80/93) 2021-05-15T13:43:13.0298942Z remote: Counting objects: 87% (81/93) 2021-05-15T13:43:13.0299533Z remote: Counting objects: 88% (82/93) 2021-05-15T13:43:13.0300013Z remote: Counting objects: 89% (83/93) 2021-05-15T13:43:13.0300473Z remote: Counting objects: 90% (84/93) 2021-05-15T13:43:13.0300953Z remote: Counting objects: 91% (85/93) 2021-05-15T13:43:13.0301440Z remote: Counting objects: 92% (86/93) 2021-05-15T13:43:13.0301903Z remote: Counting objects: 93% (87/93) 2021-05-15T13:43:13.0302380Z remote: Counting objects: 94% (88/93) 2021-05-15T13:43:13.0302843Z remote: Counting objects: 95% (89/93) 2021-05-15T13:43:13.0303319Z remote: Counting objects: 96% (90/93) 2021-05-15T13:43:13.0303783Z remote: Counting objects: 97% (91/93) 2021-05-15T13:43:13.0304259Z remote: Counting objects: 98% (92/93) 2021-05-15T13:43:13.0304726Z remote: Counting objects: 100% (93/93) 2021-05-15T13:43:13.0305227Z remote: Counting objects: 100% (93/93), done. 2021-05-15T13:43:13.0305766Z remote: Compressing objects: 1% (1/87) 2021-05-15T13:43:13.0306276Z remote: Compressing objects: 2% (2/87) 2021-05-15T13:43:13.0306794Z remote: Compressing objects: 3% (3/87) 2021-05-15T13:43:13.0307302Z remote: Compressing objects: 4% (4/87) 2021-05-15T13:43:13.0307821Z remote: Compressing objects: 5% (5/87) 2021-05-15T13:43:13.0308329Z remote: Compressing objects: 6% (6/87) 2021-05-15T13:43:13.0308850Z remote: Compressing objects: 8% (7/87) 2021-05-15T13:43:13.0309360Z remote: Compressing objects: 9% (8/87) 2021-05-15T13:43:13.0309880Z remote: Compressing objects: 10% (9/87) 2021-05-15T13:43:13.0310408Z remote: Compressing objects: 11% (10/87) 2021-05-15T13:43:13.0310922Z remote: Compressing objects: 12% (11/87) 2021-05-15T13:43:13.0311456Z remote: Compressing objects: 13% (12/87) 2021-05-15T13:43:13.0311966Z remote: Compressing objects: 14% (13/87) 2021-05-15T13:43:13.0312566Z remote: Compressing objects: 16% (14/87) 2021-05-15T13:43:13.0313082Z remote: Compressing objects: 17% (15/87) 2021-05-15T13:43:13.0313604Z remote: Compressing objects: 18% (16/87) 2021-05-15T13:43:13.0314116Z remote: Compressing objects: 19% (17/87) 2021-05-15T13:43:13.0314640Z remote: Compressing objects: 20% (18/87) 2021-05-15T13:43:13.0315166Z remote: Compressing objects: 21% (19/87) 2021-05-15T13:43:13.0315676Z remote: Compressing objects: 22% (20/87) 2021-05-15T13:43:13.0316200Z remote: Compressing objects: 24% (21/87) 2021-05-15T13:43:13.0316714Z remote: Compressing objects: 25% (22/87) 2021-05-15T13:43:13.0317237Z remote: Compressing objects: 26% (23/87) 2021-05-15T13:43:13.0317745Z remote: Compressing objects: 27% (24/87) 2021-05-15T13:43:13.0318266Z remote: Compressing objects: 28% (25/87) 2021-05-15T13:43:13.0318776Z remote: Compressing objects: 29% (26/87) 2021-05-15T13:43:13.0319307Z remote: Compressing objects: 31% (27/87) 2021-05-15T13:43:13.0319837Z remote: Compressing objects: 32% (28/87) 2021-05-15T13:43:13.0320345Z remote: Compressing objects: 33% (29/87) 2021-05-15T13:43:13.0320869Z remote: Compressing objects: 34% (30/87) 2021-05-15T13:43:13.0321383Z remote: Compressing objects: 35% (31/87) 2021-05-15T13:43:13.0321905Z remote: Compressing objects: 36% (32/87) 2021-05-15T13:43:13.0322418Z remote: Compressing objects: 37% (33/87) 2021-05-15T13:43:13.0322943Z remote: Compressing objects: 39% (34/87) 2021-05-15T13:43:13.0323454Z remote: Compressing objects: 40% (35/87) 2021-05-15T13:43:13.0323977Z remote: Compressing objects: 41% (36/87) 2021-05-15T13:43:13.0324506Z remote: Compressing objects: 42% (37/87) 2021-05-15T13:43:13.0325015Z remote: Compressing objects: 43% (38/87) 2021-05-15T13:43:13.0325535Z remote: Compressing objects: 44% (39/87) 2021-05-15T13:43:13.0326103Z remote: Compressing objects: 45% (40/87) 2021-05-15T13:43:13.0326629Z remote: Compressing objects: 47% (41/87) 2021-05-15T13:43:13.0327140Z remote: Compressing objects: 48% (42/87) 2021-05-15T13:43:13.0327661Z remote: Compressing objects: 49% (43/87) 2021-05-15T13:43:13.0328173Z remote: Compressing objects: 50% (44/87) 2021-05-15T13:43:13.0328701Z remote: Compressing objects: 51% (45/87) 2021-05-15T13:43:13.0329205Z remote: Compressing objects: 52% (46/87) 2021-05-15T13:43:13.0329735Z remote: Compressing objects: 54% (47/87) 2021-05-15T13:43:13.0330263Z remote: Compressing objects: 55% (48/87) 2021-05-15T13:43:13.0330769Z remote: Compressing objects: 56% (49/87) 2021-05-15T13:43:13.0331286Z remote: Compressing objects: 57% (50/87) 2021-05-15T13:43:13.0331797Z remote: Compressing objects: 58% (51/87) 2021-05-15T13:43:13.0332318Z remote: Compressing objects: 59% (52/87) 2021-05-15T13:43:13.0332845Z remote: Compressing objects: 60% (53/87) 2021-05-15T13:43:13.0333366Z remote: Compressing objects: 62% (54/87) 2021-05-15T13:43:13.0333871Z remote: Compressing objects: 63% (55/87) 2021-05-15T13:43:13.0334397Z remote: Compressing objects: 64% (56/87) 2021-05-15T13:43:13.0334918Z remote: Compressing objects: 65% (57/87) 2021-05-15T13:43:13.0335429Z remote: Compressing objects: 66% (58/87) 2021-05-15T13:43:13.0335949Z remote: Compressing objects: 67% (59/87) 2021-05-15T13:43:13.0336457Z remote: Compressing objects: 68% (60/87) 2021-05-15T13:43:13.0337094Z remote: Compressing objects: 70% (61/87) 2021-05-15T13:43:13.0337605Z remote: Compressing objects: 71% (62/87) 2021-05-15T13:43:13.0338129Z remote: Compressing objects: 72% (63/87) 2021-05-15T13:43:13.0338640Z remote: Compressing objects: 73% (64/87) 2021-05-15T13:43:13.0339162Z remote: Compressing objects: 74% (65/87) 2021-05-15T13:43:13.0339759Z remote: Compressing objects: 75% (66/87) 2021-05-15T13:43:13.0340269Z remote: Compressing objects: 77% (67/87) 2021-05-15T13:43:13.0340789Z remote: Compressing objects: 78% (68/87) 2021-05-15T13:43:13.0341295Z remote: Compressing objects: 79% (69/87) 2021-05-15T13:43:13.0341815Z remote: Compressing objects: 80% (70/87) 2021-05-15T13:43:13.0342320Z remote: Compressing objects: 81% (71/87) 2021-05-15T13:43:13.0342842Z remote: Compressing objects: 82% (72/87) 2021-05-15T13:43:13.0343353Z remote: Compressing objects: 83% (73/87) 2021-05-15T13:43:13.0343871Z remote: Compressing objects: 85% (74/87) 2021-05-15T13:43:13.0344391Z remote: Compressing objects: 86% (75/87) 2021-05-15T13:43:13.0344895Z remote: Compressing objects: 87% (76/87) 2021-05-15T13:43:13.0345414Z remote: Compressing objects: 88% (77/87) 2021-05-15T13:43:13.0362531Z remote: Compressing objects: 89% (78/87) 2021-05-15T13:43:13.0363207Z remote: Compressing objects: 90% (79/87) 2021-05-15T13:43:13.0363729Z remote: Compressing objects: 91% (80/87) 2021-05-15T13:43:13.0364258Z remote: Compressing objects: 93% (81/87) 2021-05-15T13:43:13.0364771Z remote: Compressing objects: 94% (82/87) 2021-05-15T13:43:13.0365296Z remote: Compressing objects: 95% (83/87) 2021-05-15T13:43:13.0365932Z remote: Compressing objects: 96% (84/87) 2021-05-15T13:43:13.0366440Z remote: Compressing objects: 97% (85/87) 2021-05-15T13:43:13.0366968Z remote: Compressing objects: 98% (86/87) 2021-05-15T13:43:13.0367482Z remote: Compressing objects: 100% (87/87) 2021-05-15T13:43:13.0368029Z remote: Compressing objects: 100% (87/87), done. 2021-05-15T13:43:13.2245340Z remote: Total 93 (delta 15), reused 43 (delta 4), pack-reused 0 2021-05-15T13:43:13.2263423Z From https://github.com/neuroconductor/dcmtk 2021-05-15T13:43:13.2264984Z * [new ref] 491cbcea629724ddf29fcf21643abe277a816723 -> 0.6.8.1.s 2021-05-15T13:43:13.2266390Z ##[endgroup] 2021-05-15T13:43:13.2267320Z ##[group]Determining the checkout info 2021-05-15T13:43:13.2268211Z ##[endgroup] 2021-05-15T13:43:13.2268968Z ##[group]Checking out the ref 2021-05-15T13:43:13.2269944Z [command]/usr/bin/git checkout --progress --force refs/tags/0.6.8.1.s 2021-05-15T13:43:13.2270838Z Note: switching to 'refs/tags/0.6.8.1.s'. 2021-05-15T13:43:13.2271361Z 2021-05-15T13:43:13.2272221Z You are in 'detached HEAD' state. You can look around, make experimental 2021-05-15T13:43:13.2273114Z changes and commit them, and you can discard any commits you make in this 2021-05-15T13:43:13.2273949Z state without impacting any branches by switching back to a branch. 2021-05-15T13:43:13.2274569Z 2021-05-15T13:43:13.2275157Z If you want to create a new branch to retain commits you create, you may 2021-05-15T13:43:13.2276118Z do so (now or later) by using -c with the switch command. Example: 2021-05-15T13:43:13.2276679Z 2021-05-15T13:43:13.2277260Z git switch -c 2021-05-15T13:43:13.2277711Z 2021-05-15T13:43:13.2278188Z Or undo this operation with: 2021-05-15T13:43:13.2278558Z 2021-05-15T13:43:13.2279054Z git switch - 2021-05-15T13:43:13.2279302Z 2021-05-15T13:43:13.2280071Z Turn off this advice by setting config variable advice.detachedHead to false 2021-05-15T13:43:13.2280549Z 2021-05-15T13:43:13.2280936Z HEAD is now at 491cbce Version id 31 stable 2021-05-15T13:43:13.2281486Z ##[endgroup] 2021-05-15T13:43:13.2282068Z [command]/usr/bin/git log -1 --format='%H' 2021-05-15T13:43:13.2282820Z '491cbcea629724ddf29fcf21643abe277a816723' 2021-05-15T13:43:13.2381558Z ##[group]Run r-lib/actions/setup-r@master 2021-05-15T13:43:13.2381986Z with: 2021-05-15T13:43:13.2382335Z r-version: devel 2021-05-15T13:43:13.2382687Z Ncpus: 1 2021-05-15T13:43:13.2383059Z crayon.enabled: NULL 2021-05-15T13:43:13.2383557Z remove-openmp-macos: true 2021-05-15T13:43:13.2384062Z http-user-agent: default 2021-05-15T13:43:13.2384503Z install-r: true 2021-05-15T13:43:13.2385023Z windows-path-include-mingw: true 2021-05-15T13:43:13.2385525Z env: 2021-05-15T13:43:13.2385917Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T13:43:13.2386350Z TIC_DEPLOY_KEY: 2021-05-15T13:43:13.2387095Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T13:43:13.2388757Z GITHUB_PAT: *** 2021-05-15T13:43:13.2389129Z COVERALLS_TOKEN: 2021-05-15T13:43:13.2389565Z continue-on-error: true 2021-05-15T13:43:13.2390001Z VDIFFR_RUN_TESTS: 2021-05-15T13:43:13.2390352Z ##[endgroup] 2021-05-15T13:43:14.0610388Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive add-apt-repository -y ppa:cran/travis 2021-05-15T13:43:15.8162738Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-05-15T13:43:15.8164927Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease [114 kB] 2021-05-15T13:43:15.8177244Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease [101 kB] 2021-05-15T13:43:15.8484586Z Get:4 http://security.ubuntu.com/ubuntu focal-security InRelease [109 kB] 2021-05-15T13:43:15.8508640Z Get:5 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease [10.5 kB] 2021-05-15T13:43:15.8729337Z Hit:6 https://download.mono-project.com/repo/ubuntu stable-focal InRelease 2021-05-15T13:43:15.9567526Z Hit:7 http://ppa.launchpad.net/apt-fast/stable/ubuntu focal InRelease 2021-05-15T13:43:16.1149086Z Get:8 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease [18.0 kB] 2021-05-15T13:43:16.1678766Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 Packages [983 kB] 2021-05-15T13:43:16.2040105Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main Translation-en [222 kB] 2021-05-15T13:43:16.2042158Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 c-n-f Metadata [13.3 kB] 2021-05-15T13:43:16.2043820Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted amd64 Packages [226 kB] 2021-05-15T13:43:16.2069077Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted Translation-en [33.3 kB] 2021-05-15T13:43:16.2075648Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 Packages [774 kB] 2021-05-15T13:43:16.2206765Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe Translation-en [166 kB] 2021-05-15T13:43:16.2224098Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 c-n-f Metadata [17.4 kB] 2021-05-15T13:43:16.3589842Z Hit:17 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-05-15T13:43:16.3648351Z Get:18 https://packages.microsoft.com/ubuntu/20.04/prod focal/main amd64 Packages [73.2 kB] 2021-05-15T13:43:16.5515427Z Get:19 http://security.ubuntu.com/ubuntu focal-security/main amd64 Packages [655 kB] 2021-05-15T13:43:16.6163604Z Get:20 http://security.ubuntu.com/ubuntu focal-security/main Translation-en [131 kB] 2021-05-15T13:43:16.6180320Z Get:21 http://security.ubuntu.com/ubuntu focal-security/main amd64 c-n-f Metadata [7508 B] 2021-05-15T13:43:16.6184584Z Get:22 http://security.ubuntu.com/ubuntu focal-security/restricted amd64 Packages [203 kB] 2021-05-15T13:43:16.6214424Z Get:23 http://security.ubuntu.com/ubuntu focal-security/restricted Translation-en [29.7 kB] 2021-05-15T13:43:16.6219707Z Get:24 http://security.ubuntu.com/ubuntu focal-security/universe amd64 Packages [565 kB] 2021-05-15T13:43:16.6349047Z Get:25 http://security.ubuntu.com/ubuntu focal-security/universe amd64 c-n-f Metadata [11.0 kB] 2021-05-15T13:43:25.3379410Z Fetched 4463 kB in 1s (4192 kB/s) 2021-05-15T13:43:26.1003978Z Reading package lists... 2021-05-15T13:43:26.1219058Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get update -y -qq 2021-05-15T13:43:27.9023317Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get install -y gdebi-core qpdf devscripts 2021-05-15T13:43:27.9650279Z Reading package lists... 2021-05-15T13:43:28.1287210Z Building dependency tree... 2021-05-15T13:43:28.1299644Z Reading state information... 2021-05-15T13:43:28.2668957Z The following additional packages will be installed: 2021-05-15T13:43:28.2670592Z dctrl-tools diffstat dput gettext intltool-debian libapt-pkg-perl 2021-05-15T13:43:28.2671947Z libarchive-zip-perl libarray-intspan-perl libasync-mergepoint-perl 2021-05-15T13:43:28.2677857Z libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl 2021-05-15T13:43:28.2679527Z libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl 2021-05-15T13:43:28.2681103Z libcommon-sense-perl libconst-fast-perl libcontextual-return-perl 2021-05-15T13:43:28.2682460Z libcpanel-json-xs-perl libcroco3 libdata-optlist-perl 2021-05-15T13:43:28.2683927Z libdevel-callchecker-perl libdevel-size-perl libdigest-bubblebabble-perl 2021-05-15T13:43:28.2685557Z libdigest-hmac-perl libdistro-info-perl libdynaloader-functions-perl 2021-05-15T13:43:28.2687003Z libemail-valid-perl libexporter-tiny-perl libfile-chdir-perl 2021-05-15T13:43:28.2688374Z libfile-find-rule-perl libfile-homedir-perl libfile-which-perl 2021-05-15T13:43:28.2689828Z libfont-ttf-perl libfuture-perl libgetopt-long-descriptive-perl 2021-05-15T13:43:28.2691303Z libgit-wrapper-perl libgitlab-api-v4-perl libhash-fieldhash-perl 2021-05-15T13:43:28.2692883Z libhttp-tiny-multipart-perl libimport-into-perl libio-async-loop-epoll-perl 2021-05-15T13:43:28.2694441Z libio-async-perl libio-prompter-perl libio-pty-perl libio-string-perl 2021-05-15T13:43:28.2695789Z libipc-run-perl libjson-maybexs-perl libjson-perl libjson-xs-perl 2021-05-15T13:43:28.2697635Z liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl 2021-05-15T13:43:28.2698981Z liblist-someutils-perl liblist-someutils-xs-perl 2021-05-15T13:43:28.2700523Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-05-15T13:43:28.2702212Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-05-15T13:43:28.2703641Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-05-15T13:43:28.2705214Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-05-15T13:43:28.2706536Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-05-15T13:43:28.2708042Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-05-15T13:43:28.2709647Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-05-15T13:43:28.2711118Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-05-15T13:43:28.2712537Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-05-15T13:43:28.2714040Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-05-15T13:43:28.2715547Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-05-15T13:43:28.2717056Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-05-15T13:43:28.2718605Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-05-15T13:43:28.2720048Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-05-15T13:43:28.2721454Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-05-15T13:43:28.2722872Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-05-15T13:43:28.2724143Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-05-15T13:43:28.2725396Z libtype-tiny-perl libtype-tiny-xs-perl libtypes-serialiser-perl 2021-05-15T13:43:28.2726690Z libunicode-utf8-perl libvariable-magic-perl libwant-perl libxml-writer-perl 2021-05-15T13:43:28.2727881Z libyaml-libyaml-perl licensecheck lintian patchutils python3-gpg 2021-05-15T13:43:28.2728957Z python3-magic python3-unidiff python3-xdg t1utils wdiff 2021-05-15T13:43:28.2729647Z Suggested packages: 2021-05-15T13:43:28.2730411Z debtags adequate autopkgtest bls-standalone bsd-mailx | mailx 2021-05-15T13:43:28.2731453Z check-all-the-things cvs-buildpackage debhelper devscripts-el diffoscope 2021-05-15T13:43:28.2732581Z disorderfs dose-extra duck faketime gnuplot how-can-i-help libdbd-pg-perl 2021-05-15T13:43:28.2733727Z libnet-smtps-perl libterm-size-perl libyaml-syck-perl mozilla-devscripts 2021-05-15T13:43:28.2734861Z mutt piuparts quilt ratt reprotest svn-buildpackage w3m debian-keyring 2021-05-15T13:43:28.2735895Z equivs libsoap-lite-perl python3-paramiko mini-dinstall gettext-doc 2021-05-15T13:43:28.2737070Z autopoint libasprintf-dev libgettextpo-dev libossp-uuid-perl 2021-05-15T13:43:28.2738294Z libscalar-number-perl libbareword-filehandles-perl libindirect-perl 2021-05-15T13:43:28.2739751Z libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl 2021-05-15T13:43:28.2740975Z binutils-multiarch libtext-template-perl wdiff-doc 2021-05-15T13:43:28.7428353Z The following NEW packages will be installed: 2021-05-15T13:43:28.7432477Z dctrl-tools devscripts diffstat dput gdebi-core gettext intltool-debian 2021-05-15T13:43:28.7433984Z libapt-pkg-perl libarchive-zip-perl libarray-intspan-perl 2021-05-15T13:43:28.7435646Z libasync-mergepoint-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl 2021-05-15T13:43:28.7437533Z libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl 2021-05-15T13:43:28.7439047Z libclone-perl libcommon-sense-perl libconst-fast-perl 2021-05-15T13:43:28.7440455Z libcontextual-return-perl libcpanel-json-xs-perl libcroco3 2021-05-15T13:43:28.7441937Z libdata-optlist-perl libdevel-callchecker-perl libdevel-size-perl 2021-05-15T13:43:28.7443602Z libdigest-bubblebabble-perl libdigest-hmac-perl libdistro-info-perl 2021-05-15T13:43:28.7445333Z libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl 2021-05-15T13:43:28.7446866Z libfile-chdir-perl libfile-find-rule-perl libfile-homedir-perl 2021-05-15T13:43:28.7448226Z libfile-which-perl libfont-ttf-perl libfuture-perl 2021-05-15T13:43:28.7451635Z libgetopt-long-descriptive-perl libgit-wrapper-perl libgitlab-api-v4-perl 2021-05-15T13:43:28.7457843Z libhash-fieldhash-perl libhttp-tiny-multipart-perl libimport-into-perl 2021-05-15T13:43:28.7459853Z libio-async-loop-epoll-perl libio-async-perl libio-prompter-perl 2021-05-15T13:43:28.7461311Z libio-pty-perl libio-string-perl libipc-run-perl libjson-maybexs-perl 2021-05-15T13:43:28.7462848Z libjson-perl libjson-xs-perl liblinux-epoll-perl liblist-compare-perl 2021-05-15T13:43:28.7464394Z liblist-moreutils-perl liblist-someutils-perl liblist-someutils-xs-perl 2021-05-15T13:43:28.7466205Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-05-15T13:43:28.7467923Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-05-15T13:43:28.7469460Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-05-15T13:43:28.7470875Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-05-15T13:43:28.7472237Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-05-15T13:43:28.7473827Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-05-15T13:43:28.7475489Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-05-15T13:43:28.7477069Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-05-15T13:43:28.7478515Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-05-15T13:43:28.7480137Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-05-15T13:43:28.7481741Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-05-15T13:43:28.7483291Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-05-15T13:43:28.7485069Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-05-15T13:43:28.7486637Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-05-15T13:43:28.7488369Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-05-15T13:43:28.7490024Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-05-15T13:43:28.7491587Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-05-15T13:43:28.7493075Z libtype-tiny-perl libtype-tiny-xs-perl libtypes-serialiser-perl 2021-05-15T13:43:28.7494673Z libunicode-utf8-perl libvariable-magic-perl libwant-perl libxml-writer-perl 2021-05-15T13:43:28.7496168Z libyaml-libyaml-perl licensecheck lintian patchutils python3-gpg 2021-05-15T13:43:28.7497474Z python3-magic python3-unidiff python3-xdg qpdf t1utils wdiff 2021-05-15T13:43:28.7676104Z 0 upgraded, 130 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:43:28.7677440Z Need to get 8648 kB of archives. 2021-05-15T13:43:28.7678815Z After this operation, 32.3 MB of additional disk space will be used. 2021-05-15T13:43:28.7680528Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dctrl-tools amd64 2.24-3 [61.5 kB] 2021-05-15T13:43:28.7732445Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-which-perl all 1.23-1 [13.8 kB] 2021-05-15T13:43:28.7739381Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-homedir-perl all 1.004-1 [37.3 kB] 2021-05-15T13:43:28.7746722Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-pty-perl amd64 1:1.12-1 [32.4 kB] 2021-05-15T13:43:28.7762336Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libipc-run-perl all 20180523.0-2 [89.7 kB] 2021-05-15T13:43:28.7778060Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-method-modifiers-perl all 2.13-1 [16.2 kB] 2021-05-15T13:43:28.7783410Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-op-check-perl amd64 0.22-1build2 [10.2 kB] 2021-05-15T13:43:28.7788505Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdynaloader-functions-perl all 0.003-1 [11.9 kB] 2021-05-15T13:43:28.7793818Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-callchecker-perl amd64 0.008-1ubuntu1 [14.5 kB] 2021-05-15T13:43:28.7798285Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-classify-perl amd64 0.015-1build2 [21.1 kB] 2021-05-15T13:43:28.7802705Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-runtime-perl all 0.016-1 [16.2 kB] 2021-05-15T13:43:28.7805660Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimport-into-perl all 1.002005-1 [11.0 kB] 2021-05-15T13:43:28.7822184Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librole-tiny-perl all 2.001004-1 [16.5 kB] 2021-05-15T13:43:28.7826927Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstrictures-perl all 2.000006-1 [16.3 kB] 2021-05-15T13:43:28.7828617Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-quote-perl all 2.006006-1 [19.5 kB] 2021-05-15T13:43:28.7833343Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoo-perl all 2.003006-1 [46.3 kB] 2021-05-15T13:43:28.7841007Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 patchutils amd64 0.3.4-2 [71.1 kB] 2021-05-15T13:43:28.7862746Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 wdiff amd64 1.2.2-2build1 [29.8 kB] 2021-05-15T13:43:28.7866569Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 devscripts amd64 2.20.2ubuntu2 [940 kB] 2021-05-15T13:43:28.8074843Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 diffstat amd64 1.63-1 [27.2 kB] 2021-05-15T13:43:28.8108785Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-gpg amd64 1.13.1-7ubuntu2 [165 kB] 2021-05-15T13:43:28.8110473Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dput all 1.0.3ubuntu1 [42.3 kB] 2021-05-15T13:43:28.8112032Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdebi-core all 0.9.5.7+nmu3 [116 kB] 2021-05-15T13:43:28.8115287Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB] 2021-05-15T13:43:28.8124091Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gettext amd64 0.19.8.1-10build1 [895 kB] 2021-05-15T13:43:28.8255852Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] 2021-05-15T13:43:28.8263215Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libapt-pkg-perl amd64 0.1.36build3 [68.5 kB] 2021-05-15T13:43:28.8269449Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-zip-perl all 1.67-2 [90.5 kB] 2021-05-15T13:43:28.8278209Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarray-intspan-perl all 2.003-1 [23.3 kB] 2021-05-15T13:43:28.8283310Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasync-mergepoint-perl all 0.04-2 [10.2 kB] 2021-05-15T13:43:28.8287188Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-implementation-perl all 0.09-1 [12.2 kB] 2021-05-15T13:43:28.8291851Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [6784 B] 2021-05-15T13:43:28.8295562Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvariable-magic-perl amd64 0.62-1build2 [34.4 kB] 2021-05-15T13:43:28.8301901Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-endofscope-perl all 0.24-1 [16.8 kB] 2021-05-15T13:43:28.8305443Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcapture-tiny-perl all 0.48-1 [20.4 kB] 2021-05-15T13:43:28.8311459Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-xsaccessor-perl amd64 1.19-3build3 [33.6 kB] 2021-05-15T13:43:28.8316550Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclone-perl amd64 0.43-2 [11.0 kB] 2021-05-15T13:43:28.8320824Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcommon-sense-perl amd64 3.74-2build6 [20.1 kB] 2021-05-15T13:43:28.8325000Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-util-perl amd64 1.07-3build5 [19.7 kB] 2021-05-15T13:43:28.8330737Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-install-perl all 0.928-1 [10.5 kB] 2021-05-15T13:43:28.8335369Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdata-optlist-perl all 0.110-1 [9956 B] 2021-05-15T13:43:28.8339423Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-perl all 0.987-1 [44.9 kB] 2021-05-15T13:43:28.8346205Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libconst-fast-perl all 0.014-1 [7958 B] 2021-05-15T13:43:28.8349666Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwant-perl amd64 0.29-1build4 [24.2 kB] 2021-05-15T13:43:28.8355098Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcontextual-return-perl all 0.004014-2 [53.1 kB] 2021-05-15T13:43:28.8362496Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcpanel-json-xs-perl amd64 4.19-1build1 [109 kB] 2021-05-15T13:43:28.8372513Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-bubblebabble-perl all 0.02-2 [7908 B] 2021-05-15T13:43:28.8377327Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.3 kB] 2021-05-15T13:43:28.8380696Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdistro-info-perl all 0.23ubuntu1 [4668 B] 2021-05-15T13:43:28.8386185Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-ip-perl all 1.26-2 [27.4 kB] 2021-05-15T13:43:28.8391200Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-perl all 1.22-1 [336 kB] 2021-05-15T13:43:28.8417438Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-domain-tld-perl all 1.75-1 [29.1 kB] 2021-05-15T13:43:28.8422857Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libemail-valid-perl all 1.202-1 [16.3 kB] 2021-05-15T13:43:28.8426847Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libexporter-tiny-perl all 1.002001-1 [35.5 kB] 2021-05-15T13:43:28.8432350Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-chdir-perl all 0.1008-1 [11.7 kB] 2021-05-15T13:43:28.8435777Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-compare-perl all 0.03-1 [7318 B] 2021-05-15T13:43:28.8441501Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-glob-perl all 0.10-1 [7554 B] 2021-05-15T13:43:28.8456356Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-find-rule-perl all 0.34-1 [28.3 kB] 2021-05-15T13:43:28.8458063Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-string-perl all 1.08-3 [11.1 kB] 2021-05-15T13:43:28.8477161Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfont-ttf-perl all 1.06-1 [313 kB] 2021-05-15T13:43:28.8498197Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfuture-perl all 0.43-1 [77.8 kB] 2021-05-15T13:43:28.8505558Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-validate-perl amd64 1.29-3 [52.7 kB] 2021-05-15T13:43:28.8512034Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgetopt-long-descriptive-perl all 0.104-1 [24.6 kB] 2021-05-15T13:43:28.8516907Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-versions-perl all 1.62-1 [9294 B] 2021-05-15T13:43:28.8520265Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgit-wrapper-perl all 0.048-1 [29.9 kB] 2021-05-15T13:43:28.8526376Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhttp-tiny-multipart-perl all 0.08-1 [8488 B] 2021-05-15T13:43:28.8529668Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-prompter-perl all 0.004015-1 [58.1 kB] 2021-05-15T13:43:28.8535391Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-perl all 4.02000-2 [80.9 kB] 2021-05-15T13:43:28.8542854Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-perl all 1.708-1 [67.8 kB] 2021-05-15T13:43:28.8549714Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-adapter-screen-perl all 0.140-1 [12.1 kB] 2021-05-15T13:43:28.8553820Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-perl all 0.38-1 [19.1 kB] 2021-05-15T13:43:28.8558397Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-identify-perl amd64 0.14-1build2 [10.7 kB] 2021-05-15T13:43:28.8561845Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-name-perl amd64 0.26-1 [11.5 kB] 2021-05-15T13:43:28.8566911Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnamespace-clean-perl all 0.27-1 [13.6 kB] 2021-05-15T13:43:28.8571013Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-tiny-perl all 0.108-1 [42.6 kB] 2021-05-15T13:43:28.8576730Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-perl all 1.008001-2 [304 kB] 2021-05-15T13:43:28.8599841Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgitlab-api-v4-perl all 0.25-1 [83.8 kB] 2021-05-15T13:43:28.8608289Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhash-fieldhash-perl amd64 0.15-1build2 [16.9 kB] 2021-05-15T13:43:28.8613139Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstruct-dumb-perl all 0.09-1 [10.5 kB] 2021-05-15T13:43:28.8619250Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-perl all 0.75-1 [254 kB] 2021-05-15T13:43:28.8638778Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.0 kB] 2021-05-15T13:43:28.8643096Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-loop-epoll-perl all 0.20-1 [10.4 kB] 2021-05-15T13:43:28.8646770Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtypes-serialiser-perl all 1.0-1 [12.1 kB] 2021-05-15T13:43:28.8652832Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-xs-perl amd64 4.020-1build1 [83.7 kB] 2021-05-15T13:43:28.8660343Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-maybexs-perl all 1.004000-1 [11.0 kB] 2021-05-15T13:43:28.8664237Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-compare-perl all 0.53-1 [65.6 kB] 2021-05-15T13:43:28.8670823Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-moreutils-perl amd64 0.416-1build5 [55.5 kB] 2021-05-15T13:43:28.8678184Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-perl all 0.58-1 [29.7 kB] 2021-05-15T13:43:28.8683800Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-xs-perl amd64 0.58-2 [32.5 kB] 2021-05-15T13:43:28.8688952Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-aliases-perl all 0.001006-1 [7176 B] 2021-05-15T13:43:28.8692252Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libobject-id-perl all 0.1.2-2ubuntu1 [15.9 kB] 2021-05-15T13:43:28.8696042Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-struct-perl all 0.017-1 [23.4 kB] 2021-05-15T13:43:28.8702242Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-sec-perl amd64 1.15-1 [44.6 kB] 2021-05-15T13:43:28.8708726Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-libidn-perl amd64 0.12.ds-3build2 [17.3 kB] 2021-05-15T13:43:28.8713182Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-range-perl all 0.12-1 [8556 B] 2021-05-15T13:43:28.8718286Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-xs-perl amd64 0.29-1build1 [18.4 kB] 2021-05-15T13:43:28.8724516Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-iterator-rule-perl all 1.014-1 [49.5 kB] 2021-05-15T13:43:28.8731527Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperl4-corelibs-perl all 0.004-2 [37.4 kB] 2021-05-15T13:43:28.8737270Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperlio-gzip-perl amd64 0.19-1build5 [14.6 kB] 2021-05-15T13:43:28.8741124Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpod-constants-perl all 0.19-1 [16.0 kB] 2021-05-15T13:43:28.8745194Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqpdf26 amd64 9.1.1-1build1 [421 kB] 2021-05-15T13:43:28.8800762Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libre-engine-re2-perl amd64 0.13-5 [16.2 kB] 2021-05-15T13:43:28.8820877Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libreadonly-perl all 2.050-2 [19.9 kB] 2021-05-15T13:43:28.8830688Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-perl all 0.204-1 [15.0 kB] 2021-05-15T13:43:28.8836904Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-xs-perl amd64 0.117-1build2 [12.0 kB] 2021-05-15T13:43:28.8856465Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-license-perl all 3.2.0-1 [36.2 kB] 2021-05-15T13:43:28.8858494Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-perl all 0.2.12-1 [17.1 kB] 2021-05-15T13:43:28.8860211Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-decoder-perl amd64 4.011+ds-1build1 [102 kB] 2021-05-15T13:43:28.8923008Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-encoder-perl amd64 4.011+ds-1build1 [104 kB] 2021-05-15T13:43:28.8929068Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-perl all 4.011-1 [8604 B] 2021-05-15T13:43:28.8932847Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-key-perl amd64 1.33-2build2 [35.4 kB] 2021-05-15T13:43:28.8938418Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-copyright-perl all 0.003006-1 [9608 B] 2021-05-15T13:43:28.8942296Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-escape-perl all 2010.002-2 [17.6 kB] 2021-05-15T13:43:28.8947416Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-shellquote-perl all 1.04-1 [12.0 kB] 2021-05-15T13:43:28.8951575Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libterm-readkey-perl amd64 2.38-1build1 [24.6 kB] 2021-05-15T13:43:28.8957086Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-fatal-perl all 0.014-1 [11.1 kB] 2021-05-15T13:43:28.8960410Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-refcount-perl all 0.10-1 [11.4 kB] 2021-05-15T13:43:28.8966307Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-levenshtein-perl all 0.13-1 [9612 B] 2021-05-15T13:43:28.8970299Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-xs-perl amd64 0.016-1 [22.9 kB] 2021-05-15T13:43:28.8975423Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libunicode-utf8-perl amd64 0.62-1build1 [18.1 kB] 2021-05-15T13:43:28.8980350Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxml-writer-perl all 0.625-1 [24.9 kB] 2021-05-15T13:43:28.8983948Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [28.5 kB] 2021-05-15T13:43:28.8988708Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 licensecheck all 3.0.45-1 [23.9 kB] 2021-05-15T13:43:28.8992382Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-size-perl amd64 0.83-1build1 [20.0 kB] 2021-05-15T13:43:28.8996082Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 t1utils amd64 1.41-3 [56.1 kB] 2021-05-15T13:43:28.9001789Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 lintian all 2.62.0 [980 kB] 2021-05-15T13:43:28.9146022Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-unidiff all 0.5.5-2 [9180 B] 2021-05-15T13:43:28.9149404Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-xdg all 0.26-1ubuntu1 [36.1 kB] 2021-05-15T13:43:28.9150938Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qpdf amd64 9.1.1-1build1 [476 kB] 2021-05-15T13:43:28.9186630Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-magic all 2:0.4.15-3 [9376 B] 2021-05-15T13:43:29.6180861Z Fetched 8648 kB in 0s (51.6 MB/s) 2021-05-15T13:43:29.6972504Z Selecting previously unselected package dctrl-tools. 2021-05-15T13:43:29.7636096Z (Reading database ... 2021-05-15T13:43:29.7637320Z (Reading database ... 5% 2021-05-15T13:43:29.7638221Z (Reading database ... 10% 2021-05-15T13:43:29.7639161Z (Reading database ... 15% 2021-05-15T13:43:29.7639694Z (Reading database ... 20% 2021-05-15T13:43:29.7640127Z (Reading database ... 25% 2021-05-15T13:43:29.7640648Z (Reading database ... 30% 2021-05-15T13:43:29.7641140Z (Reading database ... 35% 2021-05-15T13:43:29.7641631Z (Reading database ... 40% 2021-05-15T13:43:29.7642088Z (Reading database ... 45% 2021-05-15T13:43:29.7642559Z (Reading database ... 50% 2021-05-15T13:43:30.2358684Z (Reading database ... 55% 2021-05-15T13:43:30.9207524Z (Reading database ... 60% 2021-05-15T13:43:31.4215727Z (Reading database ... 65% 2021-05-15T13:43:32.1214406Z (Reading database ... 70% 2021-05-15T13:43:32.8805335Z 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r-devel (1) ... 2021-05-15T13:44:07.4286158Z 2021-05-15T13:44:07.4286974Z 2021-05-15T13:44:07.4287530Z Reading state information... Done 2021-05-15T13:44:07.4531364Z [command]/usr/bin/sudo ln -s /opt/R/devel/bin/R /usr/local/bin/R 2021-05-15T13:44:07.4643170Z [command]/usr/bin/sudo ln -s /opt/R/devel/bin/Rscript /usr/local/bin/Rscript 2021-05-15T13:44:07.4911092Z ##[group]Run r-lib/actions/setup-tinytex@master 2021-05-15T13:44:07.4911574Z env: 2021-05-15T13:44:07.4911972Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T13:44:07.4912412Z TIC_DEPLOY_KEY: 2021-05-15T13:44:07.4913161Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T13:44:07.4914851Z GITHUB_PAT: *** 2021-05-15T13:44:07.4915218Z COVERALLS_TOKEN: 2021-05-15T13:44:07.4915672Z continue-on-error: true 2021-05-15T13:44:07.4916103Z VDIFFR_RUN_TESTS: 2021-05-15T13:44:07.4916555Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T13:44:07.4916972Z TZ: UTC 2021-05-15T13:44:07.4917319Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T13:44:07.4917701Z NOT_CRAN: true 2021-05-15T13:44:07.4918041Z ##[endgroup] 2021-05-15T13:44:07.5405701Z [command]sudo apt-get install -y texinfo 2021-05-15T13:44:07.7061839Z Reading package lists... 2021-05-15T13:44:07.8617685Z Building dependency tree... 2021-05-15T13:44:07.8634565Z Reading state information... 2021-05-15T13:44:08.0623104Z texinfo is already the newest version (6.7.0.dfsg.2-5). 2021-05-15T13:44:08.0660862Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:44:08.3128901Z [command]sh /home/runner/work/_temp/install-unx.sh 2021-05-15T13:44:08.3623415Z --2021-05-15 13:44:08-- https://yihui.org/tinytex/TinyTeX-1.tar.gz 2021-05-15T13:44:08.3869403Z Resolving yihui.org (yihui.org)... 76.76.21.21 2021-05-15T13:44:08.3938248Z Connecting to yihui.org (yihui.org)|76.76.21.21|:443... connected. 2021-05-15T13:44:08.4335285Z HTTP request sent, awaiting response... 301 Moved Permanently 2021-05-15T13:44:08.4337917Z Location: https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu [following] 2021-05-15T13:44:08.4340192Z --2021-05-15 13:44:08-- https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu 2021-05-15T13:44:08.5052106Z Resolving ci.appveyor.com (ci.appveyor.com)... 138.91.141.243 2021-05-15T13:44:08.5667057Z Connecting to ci.appveyor.com (ci.appveyor.com)|138.91.141.243|:443... connected. 2021-05-15T13:44:08.7803152Z HTTP request sent, awaiting response... 302 Found 2021-05-15T13:44:08.7806507Z Location: https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1548/8i40h7amajmqecux/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=m8TX%2FOIxSbYRDOrVd4lFJ%2B4ADUdFdq7PZE5ddVP9BLM%3D&st=2021-05-15T13%3A43%3A08Z&se=2021-05-15T13%3A49%3A08Z&sp=r [following] 2021-05-15T13:44:08.7810442Z --2021-05-15 13:44:08-- https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1548/8i40h7amajmqecux/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=m8TX%2FOIxSbYRDOrVd4lFJ%2B4ADUdFdq7PZE5ddVP9BLM%3D&st=2021-05-15T13%3A43%3A08Z&se=2021-05-15T13%3A49%3A08Z&sp=r 2021-05-15T13:44:08.8307852Z Resolving appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)... 52.239.228.196 2021-05-15T13:44:08.8915059Z Connecting to appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)|52.239.228.196|:443... connected. 2021-05-15T13:44:09.1230688Z HTTP request sent, awaiting response... 200 OK 2021-05-15T13:44:09.1232233Z Length: 67312830 (64M) [application/octet-stream] 2021-05-15T13:44:09.1234113Z Saving to: ‘TinyTeX.tar.gz’ 2021-05-15T13:44:09.7106525Z 2021-05-15T13:44:11.8297804Z 0K ........ ........ ........ ........ 49% 12.2M 3s 2021-05-15T13:44:13.8624266Z 32768K ........ ........ ........ ........ 99% 15.6M 0s 2021-05-15T13:44:13.8625432Z 65536K 100% 3.20M=4.7s 2021-05-15T13:44:13.8625973Z 2021-05-15T13:44:13.8630782Z 2021-05-15 13:44:13 (13.5 MB/s) - ‘TinyTeX.tar.gz’ saved [67312830/67312830] 2021-05-15T13:44:13.8631609Z 2021-05-15T13:44:15.6717625Z tlmgr: setting option sys_bin to /home/runner/bin. 2021-05-15T13:44:15.6718960Z tlmgr: updating /home/runner/.TinyTeX/tlpkg/texlive.tlpdb 2021-05-15T13:44:15.9371702Z ##[group]Run tlmgr update --self 2021-05-15T13:44:15.9372303Z tlmgr update --self 2021-05-15T13:44:15.9373202Z tlmgr install filecontents upquote courier courier-scaled biber biblatex collection-luatex ae thumbpdf grfext 2021-05-15T13:44:15.9374029Z tlmgr update --all 2021-05-15T13:44:15.9420829Z shell: /usr/bin/bash -e {0} 2021-05-15T13:44:15.9421232Z env: 2021-05-15T13:44:15.9421719Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T13:44:15.9422186Z TIC_DEPLOY_KEY: 2021-05-15T13:44:15.9423088Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T13:44:15.9424819Z GITHUB_PAT: *** 2021-05-15T13:44:15.9425268Z COVERALLS_TOKEN: 2021-05-15T13:44:15.9425795Z continue-on-error: true 2021-05-15T13:44:15.9426262Z VDIFFR_RUN_TESTS: 2021-05-15T13:44:15.9426818Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T13:44:15.9427257Z TZ: UTC 2021-05-15T13:44:15.9427686Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T13:44:15.9428187Z NOT_CRAN: true 2021-05-15T13:44:15.9428683Z ##[endgroup] 2021-05-15T13:44:17.5202634Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-05-15T13:44:17.5204427Z tlmgr: no self-updates for tlmgr available 2021-05-15T13:44:18.7411925Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-05-15T13:44:18.7413092Z [1/89, ??:??/??:??] install: addliga [1k] 2021-05-15T13:44:18.8310627Z [2/89, 00:00/00:00] install: ae [57k] 2021-05-15T13:44:18.8822644Z [3/89, 00:00/00:00] install: auto-pst-pdf-lua [3k] 2021-05-15T13:44:18.9241143Z [4/89, 00:00/00:00] install: barracuda 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--no-error-if-no-engine=luajithbtex,luajittex,mfluajit --status-file=/tmp/y7VTWNJpuC/Xyx7eI3gwH. 2021-05-15T13:44:25.2173197Z OK: optex.fmt/luatex 2021-05-15T13:44:25.2174416Z tlmgr: package log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr.log 2021-05-15T13:44:25.2175863Z tlmgr: command log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr-commands.log 2021-05-15T13:44:27.0778647Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-05-15T13:44:27.0779889Z tlmgr: no updates available 2021-05-15T13:44:27.0844219Z ##[group]Run r-lib/actions/setup-pandoc@master 2021-05-15T13:44:27.0844790Z with: 2021-05-15T13:44:27.0845167Z pandoc-version: 2.7.3 2021-05-15T13:44:27.0845527Z env: 2021-05-15T13:44:27.0845933Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T13:44:27.0846368Z TIC_DEPLOY_KEY: 2021-05-15T13:44:27.0847109Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T13:44:27.0848836Z GITHUB_PAT: *** 2021-05-15T13:44:27.0849199Z COVERALLS_TOKEN: 2021-05-15T13:44:27.0849651Z continue-on-error: true 2021-05-15T13:44:27.0850080Z VDIFFR_RUN_TESTS: 2021-05-15T13:44:27.0850536Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T13:44:27.0850940Z TZ: UTC 2021-05-15T13:44:27.0851304Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T13:44:27.0851693Z NOT_CRAN: true 2021-05-15T13:44:27.0852033Z ##[endgroup] 2021-05-15T13:44:27.5242942Z [command]sudo apt-get install -y gdebi-core 2021-05-15T13:44:27.5905015Z Reading package lists... 2021-05-15T13:44:27.7596979Z Building dependency tree... 2021-05-15T13:44:27.7612888Z Reading state information... 2021-05-15T13:44:27.9832537Z gdebi-core is already the newest version (0.9.5.7+nmu3). 2021-05-15T13:44:27.9833904Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:44:27.9862289Z [command]sudo gdebi --non-interactive /home/runner/work/_temp/pandoc-2.7.3-1-amd64.deb 2021-05-15T13:44:28.0984611Z 2021-05-15T13:44:28.1142608Z Reading package lists... 0% 2021-05-15T13:44:28.1143552Z 2021-05-15T13:44:28.1187122Z Reading package lists... 100% 2021-05-15T13:44:28.1187834Z 2021-05-15T13:44:28.1188164Z 2021-05-15T13:44:28.1188715Z Reading package lists... Done 2021-05-15T13:44:28.1189140Z 2021-05-15T13:44:28.1189677Z Building dependency tree... 0% 2021-05-15T13:44:28.1190109Z 2021-05-15T13:44:28.1518831Z Building dependency tree... 0% 2021-05-15T13:44:28.1519730Z 2021-05-15T13:44:28.1520385Z Building dependency tree... 50% 2021-05-15T13:44:28.1520885Z 2021-05-15T13:44:28.2914729Z Building dependency tree... 50% 2021-05-15T13:44:28.2915183Z 2021-05-15T13:44:28.2915690Z Building dependency tree 2021-05-15T13:44:28.2916049Z 2021-05-15T13:44:28.2916560Z Reading state information... 0% 2021-05-15T13:44:28.2916932Z 2021-05-15T13:44:28.4505463Z Reading state information... 0% 2021-05-15T13:44:28.4505912Z 2021-05-15T13:44:28.4506152Z 2021-05-15T13:44:28.4506674Z Reading state information... Done 2021-05-15T13:44:28.4507074Z 2021-05-15T13:44:28.4507588Z Reading state information... 0% 2021-05-15T13:44:28.4562366Z 2021-05-15T13:44:28.4563492Z Reading state information... 1% 2021-05-15T13:44:28.4603725Z 2021-05-15T13:44:28.4604550Z Reading state information... 3% 2021-05-15T13:44:28.4643166Z 2021-05-15T13:44:28.4643910Z Reading state information... 5% 2021-05-15T13:44:28.4682774Z 2021-05-15T13:44:28.4683463Z Reading state information... 7% 2021-05-15T13:44:28.4719310Z 2021-05-15T13:44:28.4720000Z Reading state information... 9% 2021-05-15T13:44:28.4756184Z 2021-05-15T13:44:28.4756894Z Reading state information... 11% 2021-05-15T13:44:28.4794790Z 2021-05-15T13:44:28.4795461Z Reading state information... 13% 2021-05-15T13:44:28.4832486Z 2021-05-15T13:44:28.4833150Z Reading state information... 15% 2021-05-15T13:44:28.4869386Z 2021-05-15T13:44:28.4870089Z Reading state information... 17% 2021-05-15T13:44:28.4910074Z 2021-05-15T13:44:28.4910746Z Reading state information... 19% 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2021-05-15T13:44:28.6296120Z 2021-05-15T13:44:28.6296742Z Reading state information... 87% 2021-05-15T13:44:28.6346063Z 2021-05-15T13:44:28.6346555Z Reading state information... 89% 2021-05-15T13:44:28.6368596Z 2021-05-15T13:44:28.6369097Z Reading state information... 91% 2021-05-15T13:44:28.6406836Z 2021-05-15T13:44:28.6407343Z Reading state information... 93% 2021-05-15T13:44:28.6444483Z 2021-05-15T13:44:28.6444999Z Reading state information... 95% 2021-05-15T13:44:28.6484408Z 2021-05-15T13:44:28.6484924Z Reading state information... 97% 2021-05-15T13:44:28.6522652Z 2021-05-15T13:44:28.6523166Z Reading state information... 99% 2021-05-15T13:44:28.9234050Z Selecting previously unselected package pandoc. 2021-05-15T13:44:29.0510413Z (Reading database ... 261973 files and directories currently installed.) 2021-05-15T13:44:29.0651035Z Preparing to unpack .../_temp/pandoc-2.7.3-1-amd64.deb ... 2021-05-15T13:44:29.0661678Z Unpacking pandoc (2.7.3-1) ... 2021-05-15T13:44:31.1987400Z Setting up pandoc (2.7.3-1) ... 2021-05-15T13:44:31.2059034Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:44:31.9057765Z 2021-05-15T13:44:31.9058730Z 2021-05-15T13:44:31.9059457Z Reading state information... Done 2021-05-15T13:44:31.9405024Z ##[group]Run git config user.name adigherman 2021-05-15T13:44:31.9405597Z git config user.name adigherman 2021-05-15T13:44:31.9406065Z git config user.email adig@jhu.edu 2021-05-15T13:44:31.9444334Z shell: /usr/bin/bash -e {0} 2021-05-15T13:44:31.9444680Z env: 2021-05-15T13:44:31.9445059Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T13:44:31.9445472Z TIC_DEPLOY_KEY: 2021-05-15T13:44:31.9446159Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T13:44:31.9447679Z GITHUB_PAT: *** 2021-05-15T13:44:31.9448027Z COVERALLS_TOKEN: 2021-05-15T13:44:31.9448433Z continue-on-error: true 2021-05-15T13:44:31.9448839Z VDIFFR_RUN_TESTS: 2021-05-15T13:44:31.9449246Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T13:44:31.9449626Z TZ: UTC 2021-05-15T13:44:31.9449948Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T13:44:31.9450308Z NOT_CRAN: true 2021-05-15T13:44:31.9450632Z ##[endgroup] 2021-05-15T13:44:31.9706523Z ##[group]Run adigherman/actions/install-sysdeps-linux@master 2021-05-15T13:44:31.9707038Z env: 2021-05-15T13:44:31.9707428Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T13:44:31.9707816Z TIC_DEPLOY_KEY: 2021-05-15T13:44:31.9708478Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T13:44:31.9709978Z GITHUB_PAT: *** 2021-05-15T13:44:31.9710304Z COVERALLS_TOKEN: 2021-05-15T13:44:31.9710704Z continue-on-error: true 2021-05-15T13:44:31.9711095Z VDIFFR_RUN_TESTS: 2021-05-15T13:44:31.9711496Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T13:44:31.9711853Z TZ: UTC 2021-05-15T13:44:31.9712173Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T13:44:31.9712517Z NOT_CRAN: true 2021-05-15T13:44:31.9712817Z ##[endgroup] 2021-05-15T13:44:32.2838871Z Reading package lists... 2021-05-15T13:44:32.4427793Z Building dependency tree... 2021-05-15T13:44:32.4444580Z Reading state information... 2021-05-15T13:44:32.5766885Z The following additional packages will be installed: 2021-05-15T13:44:32.5771581Z cmake-data libjsoncpp1 librhash0 2021-05-15T13:44:32.5776178Z Suggested packages: 2021-05-15T13:44:32.5777204Z cmake-doc ninja-build 2021-05-15T13:44:32.6252871Z The following NEW packages will be installed: 2021-05-15T13:44:32.6264111Z cmake cmake-data libjsoncpp1 librhash0 2021-05-15T13:44:32.7250235Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:44:32.7251040Z Need to get 5470 kB of archives. 2021-05-15T13:44:32.7251981Z After this operation, 28.3 MB of additional disk space will be used. 2021-05-15T13:44:32.7254005Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake-data all 3.16.3-1ubuntu1 [1612 kB] 2021-05-15T13:44:32.7604419Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjsoncpp1 amd64 1.7.4-3.1ubuntu2 [75.6 kB] 2021-05-15T13:44:32.7616271Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librhash0 amd64 1.3.9-1 [113 kB] 2021-05-15T13:44:32.7627347Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake amd64 3.16.3-1ubuntu1 [3669 kB] 2021-05-15T13:44:33.2085438Z Fetched 5470 kB in 0s (26.1 MB/s) 2021-05-15T13:44:33.2509681Z Selecting previously unselected package cmake-data. 2021-05-15T13:44:33.2579894Z (Reading database ... 2021-05-15T13:44:33.2580424Z (Reading database ... 5% 2021-05-15T13:44:33.2580838Z (Reading database ... 10% 2021-05-15T13:44:33.2581235Z (Reading database ... 15% 2021-05-15T13:44:33.2581641Z (Reading database ... 20% 2021-05-15T13:44:33.2582073Z (Reading database ... 25% 2021-05-15T13:44:33.2582474Z (Reading database ... 30% 2021-05-15T13:44:33.2582864Z (Reading database ... 35% 2021-05-15T13:44:33.2583269Z (Reading database ... 40% 2021-05-15T13:44:33.2583658Z (Reading database ... 45% 2021-05-15T13:44:33.2584063Z (Reading database ... 50% 2021-05-15T13:44:33.2621229Z (Reading database ... 55% 2021-05-15T13:44:33.2657478Z (Reading database ... 60% 2021-05-15T13:44:33.2695142Z (Reading database ... 65% 2021-05-15T13:44:33.2814656Z (Reading database ... 70% 2021-05-15T13:44:33.2921672Z (Reading database ... 75% 2021-05-15T13:44:33.3178314Z (Reading database ... 80% 2021-05-15T13:44:33.3464486Z (Reading database ... 85% 2021-05-15T13:44:33.3599194Z (Reading database ... 90% 2021-05-15T13:44:33.3674370Z (Reading database ... 95% 2021-05-15T13:44:33.3674868Z (Reading database ... 100% 2021-05-15T13:44:33.3675486Z (Reading database ... 261980 files and directories currently installed.) 2021-05-15T13:44:33.3803859Z Preparing to unpack .../cmake-data_3.16.3-1ubuntu1_all.deb ... 2021-05-15T13:44:33.4023504Z Unpacking cmake-data (3.16.3-1ubuntu1) ... 2021-05-15T13:44:33.9518729Z Selecting previously unselected package libjsoncpp1:amd64. 2021-05-15T13:44:33.9798088Z Preparing to unpack .../libjsoncpp1_1.7.4-3.1ubuntu2_amd64.deb ... 2021-05-15T13:44:33.9873942Z Unpacking libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-05-15T13:44:34.0338098Z Selecting previously unselected package librhash0:amd64. 2021-05-15T13:44:34.0578047Z Preparing to unpack .../librhash0_1.3.9-1_amd64.deb ... 2021-05-15T13:44:34.0599019Z Unpacking librhash0:amd64 (1.3.9-1) ... 2021-05-15T13:44:34.1059969Z Selecting previously unselected package cmake. 2021-05-15T13:44:34.1342869Z Preparing to unpack .../cmake_3.16.3-1ubuntu1_amd64.deb ... 2021-05-15T13:44:34.1369511Z Unpacking cmake (3.16.3-1ubuntu1) ... 2021-05-15T13:44:34.5257881Z Setting up librhash0:amd64 (1.3.9-1) ... 2021-05-15T13:44:34.5352459Z Setting up cmake-data (3.16.3-1ubuntu1) ... 2021-05-15T13:44:34.5828604Z Setting up libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-05-15T13:44:34.5902363Z Setting up cmake (3.16.3-1ubuntu1) ... 2021-05-15T13:44:34.5999879Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:44:35.6559264Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:44:37.6266218Z Reading package lists... 2021-05-15T13:44:37.7845311Z Building dependency tree... 2021-05-15T13:44:37.7863285Z Reading state information... 2021-05-15T13:44:37.9290932Z Suggested packages: 2021-05-15T13:44:37.9293961Z libssh-doc 2021-05-15T13:44:37.9732407Z The following NEW packages will be installed: 2021-05-15T13:44:37.9735961Z libssh-dev 2021-05-15T13:44:37.9954473Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:44:37.9955645Z Need to get 219 kB of archives. 2021-05-15T13:44:37.9956741Z After this operation, 1127 kB of additional disk space will be used. 2021-05-15T13:44:37.9958666Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-dev amd64 0.9.3-2ubuntu2.1 [219 kB] 2021-05-15T13:44:38.3616082Z Fetched 219 kB in 0s (9557 kB/s) 2021-05-15T13:44:38.3941785Z Selecting previously unselected package libssh-dev:amd64. 2021-05-15T13:44:38.4009653Z (Reading database ... 2021-05-15T13:44:38.4010284Z (Reading database ... 5% 2021-05-15T13:44:38.4010859Z (Reading database ... 10% 2021-05-15T13:44:38.4011423Z (Reading database ... 15% 2021-05-15T13:44:38.4011976Z (Reading database ... 20% 2021-05-15T13:44:38.4012533Z (Reading database ... 25% 2021-05-15T13:44:38.4013142Z (Reading database ... 30% 2021-05-15T13:44:38.4013706Z (Reading database ... 35% 2021-05-15T13:44:38.4014264Z (Reading database ... 40% 2021-05-15T13:44:38.4014808Z (Reading database ... 45% 2021-05-15T13:44:38.4015363Z (Reading database ... 50% 2021-05-15T13:44:38.4045832Z (Reading database ... 55% 2021-05-15T13:44:38.4079935Z (Reading database ... 60% 2021-05-15T13:44:38.4115718Z (Reading database ... 65% 2021-05-15T13:44:38.4234652Z (Reading database ... 70% 2021-05-15T13:44:38.4342218Z (Reading database ... 75% 2021-05-15T13:44:38.4606815Z (Reading database ... 80% 2021-05-15T13:44:38.4913408Z (Reading database ... 85% 2021-05-15T13:44:38.5063555Z (Reading database ... 90% 2021-05-15T13:44:38.5142218Z (Reading database ... 95% 2021-05-15T13:44:38.5145296Z (Reading database ... 100% 2021-05-15T13:44:38.5146106Z (Reading database ... 264764 files and directories currently installed.) 2021-05-15T13:44:38.5272659Z Preparing to unpack .../libssh-dev_0.9.3-2ubuntu2.1_amd64.deb ... 2021-05-15T13:44:38.5297670Z Unpacking libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-05-15T13:44:38.6196388Z Setting up libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-05-15T13:44:40.4955667Z Reading package lists... 2021-05-15T13:44:40.6518705Z Building dependency tree... 2021-05-15T13:44:40.6534284Z Reading state information... 2021-05-15T13:44:40.8369093Z The following NEW packages will be installed: 2021-05-15T13:44:40.8372375Z jags 2021-05-15T13:44:40.8556216Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:44:40.8557117Z Need to get 1562 kB of archives. 2021-05-15T13:44:40.8557809Z After this operation, 3615 kB of additional disk space will be used. 2021-05-15T13:44:40.8559527Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 jags amd64 4.3.0-3build1 [1562 kB] 2021-05-15T13:44:41.2563261Z Fetched 1562 kB in 0s (32.3 MB/s) 2021-05-15T13:44:41.2905129Z Selecting previously unselected package jags. 2021-05-15T13:44:41.2973227Z (Reading database ... 2021-05-15T13:44:41.2973874Z (Reading database ... 5% 2021-05-15T13:44:41.2975821Z (Reading database ... 10% 2021-05-15T13:44:41.2976389Z (Reading database ... 15% 2021-05-15T13:44:41.2978673Z (Reading database ... 20% 2021-05-15T13:44:41.2979549Z (Reading database ... 25% 2021-05-15T13:44:41.2980141Z (Reading database ... 30% 2021-05-15T13:44:41.2980700Z (Reading database ... 35% 2021-05-15T13:44:41.2981276Z (Reading database ... 40% 2021-05-15T13:44:41.2981842Z (Reading database ... 45% 2021-05-15T13:44:41.2982415Z (Reading database ... 50% 2021-05-15T13:44:41.3014648Z (Reading database ... 55% 2021-05-15T13:44:41.3048105Z (Reading database ... 60% 2021-05-15T13:44:41.3083710Z (Reading database ... 65% 2021-05-15T13:44:41.3202441Z (Reading database ... 70% 2021-05-15T13:44:41.3307864Z (Reading database ... 75% 2021-05-15T13:44:41.3554224Z (Reading database ... 80% 2021-05-15T13:44:41.3845617Z (Reading database ... 85% 2021-05-15T13:44:41.3978932Z (Reading database ... 90% 2021-05-15T13:44:41.4049679Z (Reading database ... 95% 2021-05-15T13:44:41.4050460Z (Reading database ... 100% 2021-05-15T13:44:41.4051427Z (Reading database ... 264783 files and directories currently installed.) 2021-05-15T13:44:41.4171778Z Preparing to unpack .../jags_4.3.0-3build1_amd64.deb ... 2021-05-15T13:44:41.4219483Z Unpacking jags (4.3.0-3build1) ... 2021-05-15T13:44:41.5729856Z Setting up jags (4.3.0-3build1) ... 2021-05-15T13:44:41.5913410Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:44:42.2491225Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:44:44.0690010Z Reading package lists... 2021-05-15T13:44:44.2191255Z Building dependency tree... 2021-05-15T13:44:44.2207492Z Reading state information... 2021-05-15T13:44:44.3625317Z The following additional packages will be installed: 2021-05-15T13:44:44.3628481Z libnode64 libuv1-dev 2021-05-15T13:44:44.4068575Z The following NEW packages will be installed: 2021-05-15T13:44:44.4071728Z libnode-dev libnode64 libuv1-dev 2021-05-15T13:44:44.4263658Z 0 upgraded, 3 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:44:44.4264723Z Need to get 6239 kB of archives. 2021-05-15T13:44:44.4265862Z After this operation, 24.9 MB of additional disk space will be used. 2021-05-15T13:44:44.4267734Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libuv1-dev amd64 1.34.2-1ubuntu1.1 [103 kB] 2021-05-15T13:44:44.4310003Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode64 amd64 10.19.0~dfsg-3ubuntu1 [5765 kB] 2021-05-15T13:44:44.5230322Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode-dev amd64 10.19.0~dfsg-3ubuntu1 [370 kB] 2021-05-15T13:44:44.9042637Z Fetched 6239 kB in 0s (54.3 MB/s) 2021-05-15T13:44:44.9328515Z Selecting previously unselected package libuv1-dev:amd64. 2021-05-15T13:44:44.9395823Z (Reading database ... 2021-05-15T13:44:44.9396645Z (Reading database ... 5% 2021-05-15T13:44:44.9397299Z (Reading database ... 10% 2021-05-15T13:44:44.9397942Z (Reading database ... 15% 2021-05-15T13:44:44.9398609Z (Reading database ... 20% 2021-05-15T13:44:44.9399231Z (Reading database ... 25% 2021-05-15T13:44:44.9399857Z (Reading database ... 30% 2021-05-15T13:44:44.9400474Z (Reading database ... 35% 2021-05-15T13:44:44.9401098Z (Reading database ... 40% 2021-05-15T13:44:44.9401722Z (Reading database ... 45% 2021-05-15T13:44:44.9402336Z (Reading database ... 50% 2021-05-15T13:44:44.9420194Z (Reading database ... 55% 2021-05-15T13:44:44.9455267Z (Reading database ... 60% 2021-05-15T13:44:44.9491029Z (Reading database ... 65% 2021-05-15T13:44:44.9602566Z (Reading database ... 70% 2021-05-15T13:44:44.9714341Z (Reading database ... 75% 2021-05-15T13:44:44.9978304Z (Reading database ... 80% 2021-05-15T13:44:45.0281313Z (Reading database ... 85% 2021-05-15T13:44:45.0423138Z (Reading database ... 90% 2021-05-15T13:44:45.0500719Z (Reading database ... 95% 2021-05-15T13:44:45.0501278Z (Reading database ... 100% 2021-05-15T13:44:45.0502098Z (Reading database ... 264923 files and directories currently installed.) 2021-05-15T13:44:45.0626180Z Preparing to unpack .../libuv1-dev_1.34.2-1ubuntu1.1_amd64.deb ... 2021-05-15T13:44:45.0642908Z Unpacking libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-05-15T13:44:45.1138601Z Selecting previously unselected package libnode64:amd64. 2021-05-15T13:44:45.1410216Z Preparing to unpack .../libnode64_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-05-15T13:44:45.1470797Z Unpacking libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-15T13:44:45.7513733Z Selecting previously unselected package libnode-dev:amd64. 2021-05-15T13:44:45.7795029Z Preparing to unpack .../libnode-dev_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-05-15T13:44:45.7805558Z Unpacking libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-15T13:44:45.8749432Z Setting up libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-05-15T13:44:45.8770240Z Setting up libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-15T13:44:45.8815269Z Setting up libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-15T13:44:45.8927984Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:44:47.7913433Z Reading package lists... 2021-05-15T13:44:47.9412298Z Building dependency tree... 2021-05-15T13:44:47.9430579Z Reading state information... 2021-05-15T13:44:48.0864745Z The following additional packages will be installed: 2021-05-15T13:44:48.0868059Z libfftw3-bin libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-05-15T13:44:48.0871485Z Suggested packages: 2021-05-15T13:44:48.0873667Z libfftw3-doc 2021-05-15T13:44:48.1315155Z The following NEW packages will be installed: 2021-05-15T13:44:48.1319187Z libfftw3-bin libfftw3-dev libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-05-15T13:44:48.1488553Z 0 upgraded, 5 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:44:48.1489585Z Need to get 3986 kB of archives. 2021-05-15T13:44:48.1490723Z After this operation, 22.4 MB of additional disk space will be used. 2021-05-15T13:44:48.1492579Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-long3 amd64 3.3.8-2ubuntu1 [313 kB] 2021-05-15T13:44:48.1546719Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-quad3 amd64 3.3.8-2ubuntu1 [673 kB] 2021-05-15T13:44:48.1637625Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-single3 amd64 3.3.8-2ubuntu1 [756 kB] 2021-05-15T13:44:48.1698626Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-bin amd64 3.3.8-2ubuntu1 [32.2 kB] 2021-05-15T13:44:48.1702216Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-dev amd64 3.3.8-2ubuntu1 [2211 kB] 2021-05-15T13:44:48.5698785Z Fetched 3986 kB in 0s (75.2 MB/s) 2021-05-15T13:44:48.6048363Z Selecting previously unselected package libfftw3-long3:amd64. 2021-05-15T13:44:48.6049124Z (Reading database ... 2021-05-15T13:44:48.6049595Z (Reading database ... 5% 2021-05-15T13:44:48.6050040Z (Reading database ... 10% 2021-05-15T13:44:48.6050495Z (Reading database ... 15% 2021-05-15T13:44:48.6050936Z (Reading database ... 20% 2021-05-15T13:44:48.6051388Z (Reading database ... 25% 2021-05-15T13:44:48.6051858Z (Reading database ... 30% 2021-05-15T13:44:48.6052312Z (Reading database ... 35% 2021-05-15T13:44:48.6052765Z (Reading database ... 40% 2021-05-15T13:44:48.6053203Z (Reading database ... 45% 2021-05-15T13:44:48.6053649Z (Reading database ... 50% 2021-05-15T13:44:48.6090827Z (Reading database ... 55% 2021-05-15T13:44:48.6126467Z (Reading database ... 60% 2021-05-15T13:44:48.6162886Z (Reading database ... 65% 2021-05-15T13:44:48.6279254Z (Reading database ... 70% 2021-05-15T13:44:48.6387135Z (Reading database ... 75% 2021-05-15T13:44:48.6640850Z (Reading database ... 80% 2021-05-15T13:44:48.6930411Z (Reading database ... 85% 2021-05-15T13:44:48.7066750Z (Reading database ... 90% 2021-05-15T13:44:48.7139247Z (Reading database ... 95% 2021-05-15T13:44:48.7139768Z (Reading database ... 100% 2021-05-15T13:44:48.7140464Z (Reading database ... 265059 files and directories currently installed.) 2021-05-15T13:44:48.7265079Z Preparing to unpack .../libfftw3-long3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-15T13:44:48.7300175Z Unpacking libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-05-15T13:44:48.7978730Z Selecting previously unselected package libfftw3-quad3:amd64. 2021-05-15T13:44:48.8215924Z Preparing to unpack .../libfftw3-quad3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-15T13:44:49.0723379Z Unpacking libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-05-15T13:44:49.5279037Z Selecting previously unselected package libfftw3-single3:amd64. 2021-05-15T13:44:49.5509603Z Preparing to unpack .../libfftw3-single3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-15T13:44:49.6801289Z Unpacking libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-05-15T13:44:49.7739533Z Selecting previously unselected package libfftw3-bin. 2021-05-15T13:44:49.7965916Z Preparing to unpack .../libfftw3-bin_3.3.8-2ubuntu1_amd64.deb ... 2021-05-15T13:44:49.7983252Z Unpacking libfftw3-bin (3.3.8-2ubuntu1) ... 2021-05-15T13:44:49.8341226Z Selecting previously unselected package libfftw3-dev:amd64. 2021-05-15T13:44:49.8624549Z Preparing to unpack .../libfftw3-dev_3.3.8-2ubuntu1_amd64.deb ... 2021-05-15T13:44:49.8670956Z Unpacking libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-05-15T13:44:50.1415163Z Setting up libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-05-15T13:44:50.1493995Z Setting up libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-05-15T13:44:50.1559330Z Setting up libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-05-15T13:44:50.1611913Z Setting up libfftw3-bin (3.3.8-2ubuntu1) ... 2021-05-15T13:44:50.1645348Z Setting up libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-05-15T13:44:50.1716758Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:44:50.9096451Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:44:52.7786965Z Reading package lists... 2021-05-15T13:44:52.9429640Z Building dependency tree... 2021-05-15T13:44:52.9446743Z Reading state information... 2021-05-15T13:44:53.0901724Z The following additional packages will be installed: 2021-05-15T13:44:53.0902925Z libdcmtk14 2021-05-15T13:44:53.1353056Z The following NEW packages will be installed: 2021-05-15T13:44:53.1358825Z dcmtk libdcmtk14 2021-05-15T13:44:53.1569926Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:44:53.1570935Z Need to get 5546 kB of archives. 2021-05-15T13:44:53.1572029Z After this operation, 26.5 MB of additional disk space will be used. 2021-05-15T13:44:53.1573936Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdcmtk14 amd64 3.6.4-2.1build2 [4682 kB] 2021-05-15T13:44:53.2199911Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 dcmtk amd64 3.6.4-2.1build2 [864 kB] 2021-05-15T13:44:53.6066202Z Fetched 5546 kB in 0s (64.1 MB/s) 2021-05-15T13:44:53.6397470Z Selecting previously unselected package libdcmtk14. 2021-05-15T13:44:53.6468928Z (Reading database ... 2021-05-15T13:44:53.6469454Z (Reading database ... 5% 2021-05-15T13:44:53.6469915Z (Reading database ... 10% 2021-05-15T13:44:53.6470359Z (Reading database ... 15% 2021-05-15T13:44:53.6470808Z (Reading database ... 20% 2021-05-15T13:44:53.6471284Z (Reading database ... 25% 2021-05-15T13:44:53.6471737Z (Reading database ... 30% 2021-05-15T13:44:53.6472172Z (Reading database ... 35% 2021-05-15T13:44:53.6472623Z (Reading database ... 40% 2021-05-15T13:44:53.6473074Z (Reading database ... 45% 2021-05-15T13:44:53.6473512Z (Reading database ... 50% 2021-05-15T13:44:53.6513214Z (Reading database ... 55% 2021-05-15T13:44:53.6548531Z (Reading database ... 60% 2021-05-15T13:44:53.6586668Z (Reading database ... 65% 2021-05-15T13:44:53.6711158Z (Reading database ... 70% 2021-05-15T13:44:53.6827621Z (Reading database ... 75% 2021-05-15T13:44:53.7088890Z (Reading database ... 80% 2021-05-15T13:44:53.7404697Z (Reading database ... 85% 2021-05-15T13:44:53.7548824Z (Reading database ... 90% 2021-05-15T13:44:53.7624302Z (Reading database ... 95% 2021-05-15T13:44:53.7625196Z (Reading database ... 100% 2021-05-15T13:44:53.7626147Z (Reading database ... 265150 files and directories currently installed.) 2021-05-15T13:44:53.7756847Z Preparing to unpack .../libdcmtk14_3.6.4-2.1build2_amd64.deb ... 2021-05-15T13:44:53.7790774Z Unpacking libdcmtk14 (3.6.4-2.1build2) ... 2021-05-15T13:44:54.2618159Z Selecting previously unselected package dcmtk. 2021-05-15T13:44:54.2827255Z Preparing to unpack .../dcmtk_3.6.4-2.1build2_amd64.deb ... 2021-05-15T13:44:54.2881217Z Unpacking dcmtk (3.6.4-2.1build2) ... 2021-05-15T13:44:54.4243865Z Setting up libdcmtk14 (3.6.4-2.1build2) ... 2021-05-15T13:44:54.4311127Z Setting up dcmtk (3.6.4-2.1build2) ... 2021-05-15T13:44:54.4639859Z Adding `dcmtk' group to system ... 2021-05-15T13:44:54.5357378Z Adding `dcmtk' user to system ... 2021-05-15T13:44:54.6748015Z adduser: Warning: The home directory `/var/lib/dcmtk/db' does not belong to the user you are currently creating. 2021-05-15T13:44:54.9234787Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:44:56.4112877Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:44:58.3259533Z Reading package lists... 2021-05-15T13:44:58.4829075Z Building dependency tree... 2021-05-15T13:44:58.4846761Z Reading state information... 2021-05-15T13:44:58.7019652Z libsecret-1-dev is already the newest version (0.20.3-0ubuntu1). 2021-05-15T13:44:58.7020997Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:44:58.7623470Z Reading package lists... 2021-05-15T13:44:58.9190463Z Building dependency tree... 2021-05-15T13:44:58.9207023Z Reading state information... 2021-05-15T13:44:59.1498130Z libpng-dev is already the newest version (1.6.37-2). 2021-05-15T13:44:59.1499665Z libpng-dev set to manually installed. 2021-05-15T13:44:59.1500713Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:44:59.2107048Z Reading package lists... 2021-05-15T13:44:59.3661449Z Building dependency tree... 2021-05-15T13:44:59.3679059Z Reading state information... 2021-05-15T13:45:00.0862604Z The following additional packages will be installed: 2021-05-15T13:45:00.0865473Z libopenjp2-7 libpoppler-cpp0v5 libpoppler-dev libpoppler97 poppler-data 2021-05-15T13:45:00.0866969Z Suggested packages: 2021-05-15T13:45:00.0868415Z poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho 2021-05-15T13:45:00.0869753Z fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai 2021-05-15T13:45:00.0870814Z fonts-arphic-uming fonts-nanum 2021-05-15T13:45:00.0871584Z The following NEW packages will be installed: 2021-05-15T13:45:00.0872740Z libopenjp2-7 libpoppler-cpp-dev libpoppler-cpp0v5 libpoppler-dev 2021-05-15T13:45:00.0873714Z libpoppler97 poppler-data 2021-05-15T13:45:00.0874515Z 0 upgraded, 6 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:45:00.0889565Z Need to get 2582 kB of archives. 2021-05-15T13:45:00.0890306Z After this operation, 16.7 MB of additional disk space will be used. 2021-05-15T13:45:00.0891784Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 poppler-data all 0.4.9-2 [1475 kB] 2021-05-15T13:45:00.0893463Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopenjp2-7 amd64 2.3.1-1ubuntu4.20.04.1 [141 kB] 2021-05-15T13:45:00.0895111Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler97 amd64 0.86.1-0ubuntu1 [915 kB] 2021-05-15T13:45:00.0896892Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp0v5 amd64 0.86.1-0ubuntu1 [35.6 kB] 2021-05-15T13:45:00.0898534Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-dev amd64 0.86.1-0ubuntu1 [5336 B] 2021-05-15T13:45:00.0900185Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp-dev amd64 0.86.1-0ubuntu1 [10.4 kB] 2021-05-15T13:45:00.0901330Z Fetched 2582 kB in 0s (37.0 MB/s) 2021-05-15T13:45:00.0902155Z Selecting previously unselected package poppler-data. 2021-05-15T13:45:00.0902769Z (Reading database ... 2021-05-15T13:45:00.0903230Z (Reading database ... 5% 2021-05-15T13:45:00.0903675Z (Reading database ... 10% 2021-05-15T13:45:00.0904132Z (Reading database ... 15% 2021-05-15T13:45:00.0904571Z (Reading database ... 20% 2021-05-15T13:45:00.0905111Z (Reading database ... 25% 2021-05-15T13:45:00.0905559Z (Reading database ... 30% 2021-05-15T13:45:00.0906013Z (Reading database ... 35% 2021-05-15T13:45:00.0906465Z (Reading database ... 40% 2021-05-15T13:45:00.0906903Z (Reading database ... 45% 2021-05-15T13:45:00.0907361Z (Reading database ... 50% 2021-05-15T13:45:00.0907803Z (Reading database ... 55% 2021-05-15T13:45:00.0908258Z (Reading database ... 60% 2021-05-15T13:45:00.0908704Z (Reading database ... 65% 2021-05-15T13:45:00.0909161Z (Reading database ... 70% 2021-05-15T13:45:00.0996912Z (Reading database ... 75% 2021-05-15T13:45:00.1278453Z (Reading database ... 80% 2021-05-15T13:45:00.1621827Z (Reading database ... 85% 2021-05-15T13:45:00.1775470Z (Reading database ... 90% 2021-05-15T13:45:00.1857325Z (Reading database ... 95% 2021-05-15T13:45:00.1857893Z (Reading database ... 100% 2021-05-15T13:45:00.1858713Z (Reading database ... 265385 files and directories currently installed.) 2021-05-15T13:45:00.1989781Z Preparing to unpack .../0-poppler-data_0.4.9-2_all.deb ... 2021-05-15T13:45:00.2019304Z Unpacking poppler-data (0.4.9-2) ... 2021-05-15T13:45:00.4352873Z Selecting previously unselected package libopenjp2-7:amd64. 2021-05-15T13:45:00.4644824Z Preparing to unpack .../1-libopenjp2-7_2.3.1-1ubuntu4.20.04.1_amd64.deb ... 2021-05-15T13:45:00.4709889Z Unpacking libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-05-15T13:45:00.5218143Z Selecting previously unselected package libpoppler97:amd64. 2021-05-15T13:45:00.5440146Z Preparing to unpack .../2-libpoppler97_0.86.1-0ubuntu1_amd64.deb ... 2021-05-15T13:45:00.5461038Z Unpacking libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-05-15T13:45:00.6699472Z Selecting previously unselected package libpoppler-cpp0v5:amd64. 2021-05-15T13:45:00.6930538Z Preparing to unpack .../3-libpoppler-cpp0v5_0.86.1-0ubuntu1_amd64.deb ... 2021-05-15T13:45:00.6946666Z Unpacking libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-05-15T13:45:00.7339527Z Selecting previously unselected package libpoppler-dev:amd64. 2021-05-15T13:45:00.7554559Z Preparing to unpack .../4-libpoppler-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-05-15T13:45:00.7574844Z Unpacking libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-15T13:45:00.7979544Z Selecting previously unselected package libpoppler-cpp-dev:amd64. 2021-05-15T13:45:00.8198688Z Preparing to unpack .../5-libpoppler-cpp-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-05-15T13:45:00.8215705Z Unpacking libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-15T13:45:00.8821848Z Setting up poppler-data (0.4.9-2) ... 2021-05-15T13:45:00.8972192Z Setting up libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-05-15T13:45:00.9035516Z Setting up libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-05-15T13:45:00.9113497Z Setting up libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-05-15T13:45:00.9174480Z Setting up libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-15T13:45:00.9225666Z Setting up libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-15T13:45:00.9273124Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-15T13:45:01.0616384Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:45:03.0269551Z Reading package lists... 2021-05-15T13:45:03.1862676Z Building dependency tree... 2021-05-15T13:45:03.1881489Z Reading state information... 2021-05-15T13:45:03.3334652Z The following additional packages will be installed: 2021-05-15T13:45:03.3340027Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libsz2 2021-05-15T13:45:03.3346357Z Suggested packages: 2021-05-15T13:45:03.3347421Z libhdf5-doc 2021-05-15T13:45:03.3801725Z The following NEW packages will be installed: 2021-05-15T13:45:03.3805191Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libhdf5-dev 2021-05-15T13:45:03.3807540Z libsz2 2021-05-15T13:45:03.4001133Z 0 upgraded, 7 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:45:03.4002058Z Need to get 4074 kB of archives. 2021-05-15T13:45:03.4002752Z After this operation, 17.6 MB of additional disk space will be used. 2021-05-15T13:45:03.4005033Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 hdf5-helpers amd64 1.10.4+repack-11ubuntu1 [13.6 kB] 2021-05-15T13:45:03.4021582Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec0 amd64 1.0.4-1 [19.1 kB] 2021-05-15T13:45:03.4026152Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsz2 amd64 1.0.4-1 [5188 B] 2021-05-15T13:45:03.4030010Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-103 amd64 1.10.4+repack-11ubuntu1 [1311 kB] 2021-05-15T13:45:03.4270912Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-cpp-103 amd64 1.10.4+repack-11ubuntu1 [120 kB] 2021-05-15T13:45:03.4291926Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec-dev amd64 1.0.4-1 [16.9 kB] 2021-05-15T13:45:03.4295762Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-dev amd64 1.10.4+repack-11ubuntu1 [2589 kB] 2021-05-15T13:45:03.8359825Z Fetched 4074 kB in 0s (61.4 MB/s) 2021-05-15T13:45:03.8659112Z Selecting previously unselected package hdf5-helpers. 2021-05-15T13:45:03.8715455Z (Reading database ... 2021-05-15T13:45:03.8716202Z (Reading database ... 5% 2021-05-15T13:45:03.8716839Z (Reading database ... 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2021-05-15T13:45:03.9876181Z (Reading database ... 265945 files and directories currently installed.) 2021-05-15T13:45:04.0000858Z Preparing to unpack .../0-hdf5-helpers_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-15T13:45:04.0021629Z Unpacking hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-05-15T13:45:04.0364766Z Selecting previously unselected package libaec0:amd64. 2021-05-15T13:45:04.0649748Z Preparing to unpack .../1-libaec0_1.0.4-1_amd64.deb ... 2021-05-15T13:45:04.0692610Z Unpacking libaec0:amd64 (1.0.4-1) ... 2021-05-15T13:45:04.1095819Z Selecting previously unselected package libsz2:amd64. 2021-05-15T13:45:04.1312782Z Preparing to unpack .../2-libsz2_1.0.4-1_amd64.deb ... 2021-05-15T13:45:04.1330908Z Unpacking libsz2:amd64 (1.0.4-1) ... 2021-05-15T13:45:04.1721271Z Selecting previously unselected package libhdf5-103:amd64. 2021-05-15T13:45:04.2014239Z Preparing to unpack .../3-libhdf5-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-15T13:45:04.2025455Z Unpacking libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-15T13:45:04.3518876Z Selecting previously unselected package libhdf5-cpp-103:amd64. 2021-05-15T13:45:04.3799358Z Preparing to unpack .../4-libhdf5-cpp-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-15T13:45:04.3832825Z Unpacking libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-15T13:45:04.4218959Z Selecting previously unselected package libaec-dev:amd64. 2021-05-15T13:45:04.4503542Z Preparing to unpack .../5-libaec-dev_1.0.4-1_amd64.deb ... 2021-05-15T13:45:04.4514823Z Unpacking libaec-dev:amd64 (1.0.4-1) ... 2021-05-15T13:45:04.4871143Z Selecting previously unselected package libhdf5-dev. 2021-05-15T13:45:04.5148981Z Preparing to unpack .../6-libhdf5-dev_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-15T13:45:04.5170997Z Unpacking libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-05-15T13:45:04.8138933Z Setting up hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-05-15T13:45:04.8179807Z Setting up libaec0:amd64 (1.0.4-1) ... 2021-05-15T13:45:04.8202086Z Setting up libsz2:amd64 (1.0.4-1) ... 2021-05-15T13:45:04.8225644Z Setting up libaec-dev:amd64 (1.0.4-1) ... 2021-05-15T13:45:04.8248463Z Setting up libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-15T13:45:04.8298437Z Setting up libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-15T13:45:04.8355186Z Setting up libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-05-15T13:45:04.8435030Z update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 2021-05-15T13:45:04.8477041Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:45:05.5471731Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:45:07.4701457Z Reading package lists... 2021-05-15T13:45:07.6288926Z Building dependency tree... 2021-05-15T13:45:07.6305598Z Reading state information... 2021-05-15T13:45:07.7747886Z The following additional packages will be installed: 2021-05-15T13:45:07.7749476Z libdrm-dev libgl-dev libglu1-mesa libglx-dev 2021-05-15T13:45:07.8211640Z The following NEW packages will be installed: 2021-05-15T13:45:07.8214779Z libdrm-dev libgl-dev libglu1-mesa libglu1-mesa-dev libglx-dev 2021-05-15T13:45:07.8216297Z mesa-common-dev 2021-05-15T13:45:07.8398360Z 0 upgraded, 6 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:45:07.8399134Z Need to get 1761 kB of archives. 2021-05-15T13:45:07.8399815Z After this operation, 5442 kB of additional disk space will be used. 2021-05-15T13:45:07.8401630Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libdrm-dev amd64 2.4.102-1ubuntu1~20.04.1 [126 kB] 2021-05-15T13:45:07.8464700Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libglx-dev amd64 1.3.2-1~ubuntu0.20.04.1 [14.0 kB] 2021-05-15T13:45:07.8469096Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [97.8 kB] 2021-05-15T13:45:07.8503564Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa amd64 9.0.1-1build1 [168 kB] 2021-05-15T13:45:07.8538775Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa-dev amd64 9.0.1-1build1 [207 kB] 2021-05-15T13:45:07.8573058Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-common-dev amd64 20.2.6-0ubuntu0.20.04.1 [1148 kB] 2021-05-15T13:45:08.2552592Z Fetched 1761 kB in 0s (37.8 MB/s) 2021-05-15T13:45:08.2831875Z Selecting previously unselected package libdrm-dev:amd64. 2021-05-15T13:45:08.2901859Z (Reading database ... 2021-05-15T13:45:08.2902762Z (Reading database ... 5% 2021-05-15T13:45:08.2903274Z (Reading database ... 10% 2021-05-15T13:45:08.2905138Z (Reading database ... 15% 2021-05-15T13:45:08.2905620Z (Reading database ... 20% 2021-05-15T13:45:08.2907356Z (Reading database ... 25% 2021-05-15T13:45:08.2907851Z (Reading database ... 30% 2021-05-15T13:45:08.2909856Z (Reading 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(2.4.102-1ubuntu1~20.04.1) ... 2021-05-15T13:45:08.4677013Z Selecting previously unselected package libglx-dev:amd64. 2021-05-15T13:45:08.4962191Z Preparing to unpack .../1-libglx-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-15T13:45:08.4982883Z Unpacking libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-15T13:45:08.5414428Z Selecting previously unselected package libgl-dev:amd64. 2021-05-15T13:45:08.5703816Z Preparing to unpack .../2-libgl-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-15T13:45:08.5716214Z Unpacking libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-15T13:45:08.6218774Z Selecting previously unselected package libglu1-mesa:amd64. 2021-05-15T13:45:08.6467316Z Preparing to unpack .../3-libglu1-mesa_9.0.1-1build1_amd64.deb ... 2021-05-15T13:45:08.6532451Z Unpacking libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-05-15T13:45:08.7059145Z Selecting previously unselected package libglu1-mesa-dev:amd64. 2021-05-15T13:45:08.7269019Z Preparing to unpack .../4-libglu1-mesa-dev_9.0.1-1build1_amd64.deb ... 2021-05-15T13:45:08.7290918Z Unpacking libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-05-15T13:45:08.7859963Z Selecting previously unselected package mesa-common-dev:amd64. 2021-05-15T13:45:08.8116094Z Preparing to unpack .../5-mesa-common-dev_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-15T13:45:08.8139045Z Unpacking mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-15T13:45:08.9754935Z Setting up libdrm-dev:amd64 (2.4.102-1ubuntu1~20.04.1) ... 2021-05-15T13:45:08.9820239Z Setting up libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-15T13:45:08.9857959Z Setting up libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-05-15T13:45:08.9907396Z Setting up libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-15T13:45:08.9986472Z Setting up libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-05-15T13:45:09.0026301Z Setting up mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-15T13:45:09.0106353Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:45:10.2952250Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:45:12.2734000Z Reading package lists... 2021-05-15T13:45:12.4310639Z Building dependency tree... 2021-05-15T13:45:12.4327939Z Reading state information... 2021-05-15T13:45:12.5784933Z The following additional packages will be installed: 2021-05-15T13:45:12.5787079Z libprotobuf-lite17 libprotoc17 2021-05-15T13:45:12.6220810Z The following NEW packages will be installed: 2021-05-15T13:45:12.6225503Z libprotobuf-dev libprotobuf-lite17 libprotoc-dev libprotoc17 2021-05-15T13:45:12.6228954Z protobuf-compiler 2021-05-15T13:45:12.6450673Z 0 upgraded, 5 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:45:12.6451355Z Need to get 2754 kB of archives. 2021-05-15T13:45:12.6452051Z After this operation, 19.9 MB of additional disk space will be used. 2021-05-15T13:45:12.6453678Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-lite17 amd64 3.6.1.3-2ubuntu5 [132 kB] 2021-05-15T13:45:12.6527080Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc17 amd64 3.6.1.3-2ubuntu5 [646 kB] 2021-05-15T13:45:12.6669588Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-dev amd64 3.6.1.3-2ubuntu5 [1155 kB] 2021-05-15T13:45:12.6868122Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc-dev amd64 3.6.1.3-2ubuntu5 [793 kB] 2021-05-15T13:45:12.6990532Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 protobuf-compiler amd64 3.6.1.3-2ubuntu5 [27.6 kB] 2021-05-15T13:45:13.0822038Z Fetched 2754 kB in 0s (38.2 MB/s) 2021-05-15T13:45:13.1131982Z Selecting previously unselected package libprotobuf-lite17:amd64. 2021-05-15T13:45:13.1206672Z (Reading database ... 2021-05-15T13:45:13.1207218Z (Reading database ... 5% 2021-05-15T13:45:13.1209118Z (Reading database ... 10% 2021-05-15T13:45:13.1209602Z (Reading database ... 15% 2021-05-15T13:45:13.1211425Z (Reading 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2021-05-15T13:45:13.2485439Z Preparing to unpack .../libprotobuf-lite17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-15T13:45:13.2508569Z Unpacking libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-15T13:45:13.2967138Z Selecting previously unselected package libprotoc17:amd64. 2021-05-15T13:45:13.3215075Z Preparing to unpack .../libprotoc17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-15T13:45:13.3246459Z Unpacking libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-15T13:45:13.4099584Z Selecting previously unselected package libprotobuf-dev:amd64. 2021-05-15T13:45:13.4339592Z Preparing to unpack .../libprotobuf-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-15T13:45:13.4354979Z Unpacking libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-15T13:45:13.5868076Z Selecting previously unselected package libprotoc-dev:amd64. 2021-05-15T13:45:13.6139110Z Preparing to unpack .../libprotoc-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-15T13:45:13.6149129Z Unpacking libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-15T13:45:13.7330123Z Selecting previously unselected package protobuf-compiler. 2021-05-15T13:45:13.7614792Z Preparing to unpack .../protobuf-compiler_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-15T13:45:13.7676612Z Unpacking protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-05-15T13:45:13.8336004Z Setting up libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-15T13:45:13.8403998Z Setting up protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-05-15T13:45:13.8460788Z Setting up libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-15T13:45:13.8606740Z Setting up libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-15T13:45:13.8667253Z Setting up libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-15T13:45:13.8707445Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:45:14.5480432Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:45:16.4722922Z Reading package lists... 2021-05-15T13:45:16.6314540Z Building dependency tree... 2021-05-15T13:45:16.6332015Z Reading state information... 2021-05-15T13:45:16.7809872Z The following additional packages will be installed: 2021-05-15T13:45:16.7812053Z i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 libasyncns0 2021-05-15T13:45:16.7813550Z libavc1394-0 libavcodec58 libavdevice58 libavfilter7 libavformat58 2021-05-15T13:45:16.7815832Z libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 libcaca0 2021-05-15T13:45:16.7817455Z libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 libcodec2-0.9 2021-05-15T13:45:16.7818821Z libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 libigdgmm11 2021-05-15T13:45:16.7820050Z libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-05-15T13:45:16.7821689Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-05-15T13:45:16.7823014Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-05-15T13:45:16.7824287Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-05-15T13:45:16.7825542Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-05-15T13:45:16.7826993Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-05-15T13:45:16.7828243Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-05-15T13:45:16.7829425Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-05-15T13:45:16.7830621Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-05-15T13:45:16.7831425Z Suggested packages: 2021-05-15T13:45:16.7832503Z ffmpeg-doc i965-va-driver-shaders libbluray-bdj jackd2 libportaudio2 2021-05-15T13:45:16.7833865Z opus-tools pulseaudio libraw1394-doc serdi sndiod sordi speex opencl-icd 2021-05-15T13:45:16.7835385Z libvdpau-va-gl1 nvidia-vdpau-driver nvidia-legacy-340xx-vdpau-driver 2021-05-15T13:45:16.7837255Z nvidia-legacy-304xx-vdpau-driver 2021-05-15T13:45:16.8502614Z The following NEW packages will be installed: 2021-05-15T13:45:16.8505097Z ffmpeg i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 2021-05-15T13:45:16.8506753Z libasyncns0 libavc1394-0 libavcodec58 libavdevice58 libavfilter7 2021-05-15T13:45:16.8508133Z libavformat58 libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 2021-05-15T13:45:16.8509722Z libcaca0 libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 2021-05-15T13:45:16.8511351Z libcodec2-0.9 libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 2021-05-15T13:45:16.8512922Z libigdgmm11 libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-05-15T13:45:16.8514552Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-05-15T13:45:16.8516177Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-05-15T13:45:16.8517712Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-05-15T13:45:16.8519245Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-05-15T13:45:16.8520825Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-05-15T13:45:16.8522306Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-05-15T13:45:16.8523799Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-05-15T13:45:16.8525814Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-05-15T13:45:16.8765933Z 0 upgraded, 76 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:45:16.8766647Z Need to get 47.1 MB of archives. 2021-05-15T13:45:16.8767340Z After this operation, 195 MB of additional disk space will be used. 2021-05-15T13:45:16.8769125Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaom0 amd64 1.0.0.errata1-3build1 [1160 kB] 2021-05-15T13:45:16.9191206Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva2 amd64 2.7.0-2 [53.5 kB] 2021-05-15T13:45:16.9205705Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-drm2 amd64 2.7.0-2 [7044 B] 2021-05-15T13:45:16.9214115Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-x11-2 amd64 2.7.0-2 [11.9 kB] 2021-05-15T13:45:16.9221864Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvdpau1 amd64 1.3-1ubuntu2 [25.6 kB] 2021-05-15T13:45:16.9250228Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1ubuntu1 [30.3 kB] 2021-05-15T13:45:16.9261241Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavutil56 amd64 7:4.2.4-1ubuntu0.1 [241 kB] 2021-05-15T13:45:16.9320862Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcodec2-0.9 amd64 0.9.2-2 [7886 kB] 2021-05-15T13:45:17.1236728Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgsm1 amd64 1.0.18-2 [24.4 kB] 2021-05-15T13:45:17.1244238Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmp3lame0 amd64 3.100-3 [133 kB] 2021-05-15T13:45:17.1275049Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libopus0 amd64 1.3.1-0ubuntu1 [191 kB] 2021-05-15T13:45:17.1309023Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libshine3 amd64 3.1.1-2 [23.2 kB] 2021-05-15T13:45:17.1331767Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsnappy1v5 amd64 1.1.8-1build1 [16.7 kB] 2021-05-15T13:45:17.1344271Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libspeex1 amd64 1.2~rc1.2-1.1ubuntu1 [53.2 kB] 2021-05-15T13:45:17.1367297Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsoxr0 amd64 0.1.3-2build1 [78.0 kB] 2021-05-15T13:45:17.1393149Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswresample3 amd64 7:4.2.4-1ubuntu0.1 [57.1 kB] 2021-05-15T13:45:17.1410703Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtheora0 amd64 1.1.1+dfsg.1-15ubuntu2 [162 kB] 2021-05-15T13:45:17.1457916Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtwolame0 amd64 0.4.0-2 [47.6 kB] 2021-05-15T13:45:17.1517922Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvorbisenc2 amd64 1.3.6-2ubuntu1 [70.7 kB] 2021-05-15T13:45:17.1565435Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwavpack1 amd64 5.2.0-1ubuntu0.1 [77.3 kB] 2021-05-15T13:45:17.1591718Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx264-155 amd64 2:0.155.2917+git0a84d98-2 [521 kB] 2021-05-15T13:45:17.1666271Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx265-179 amd64 3.2.1-1build1 [1060 kB] 2021-05-15T13:45:17.1859641Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxvidcore4 amd64 2:1.3.7-1 [201 kB] 2021-05-15T13:45:17.1905621Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi-common all 0.2.35-17 [32.5 kB] 2021-05-15T13:45:17.1913328Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi0 amd64 0.2.35-17 [237 kB] 2021-05-15T13:45:17.1950649Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavcodec58 amd64 7:4.2.4-1ubuntu0.1 [4876 kB] 2021-05-15T13:45:17.2721797Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libraw1394-11 amd64 2.1.2-1 [30.7 kB] 2021-05-15T13:45:17.2729690Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavc1394-0 amd64 0.5.4-5 [16.2 kB] 2021-05-15T13:45:17.2737780Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libass9 amd64 1:0.14.0-2 [88.0 kB] 2021-05-15T13:45:17.2755787Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbluray2 amd64 1:1.2.0-1 [138 kB] 2021-05-15T13:45:17.2783969Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libchromaprint1 amd64 1.4.3-3build1 [37.6 kB] 2021-05-15T13:45:17.2792590Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgme0 amd64 0.6.2-1build1 [123 kB] 2021-05-15T13:45:17.2817191Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmpg123-0 amd64 1.25.13-1 [124 kB] 2021-05-15T13:45:17.2831185Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenmpt0 amd64 0.4.11-1build1 [599 kB] 2021-05-15T13:45:17.2971599Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-gcrypt-4 amd64 0.9.3-2ubuntu2.1 [201 kB] 2021-05-15T13:45:17.3016947Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavformat58 amd64 7:4.2.4-1ubuntu0.1 [981 kB] 2021-05-15T13:45:17.3182213Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbs2b0 amd64 3.1.0+dfsg-2.2build1 [10.2 kB] 2021-05-15T13:45:17.3187774Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libflite1 amd64 2.1-release-3 [12.8 MB] 2021-05-15T13:45:18.0270290Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libserd-0-0 amd64 0.30.2-1 [46.6 kB] 2021-05-15T13:45:18.0279467Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsord-0-0 amd64 0.16.4-1 [19.5 kB] 2021-05-15T13:45:18.0286449Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsratom-0-0 amd64 0.6.4-1 [16.9 kB] 2021-05-15T13:45:18.0292107Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 liblilv-0-0 amd64 0.24.6-1ubuntu0.1 [40.6 kB] 2021-05-15T13:45:18.0302350Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmysofa1 amd64 1.0~dfsg0-1 [39.2 kB] 2021-05-15T13:45:18.0355961Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libpostproc55 amd64 7:4.2.4-1ubuntu0.1 [55.3 kB] 2021-05-15T13:45:18.0368376Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsamplerate0 amd64 0.1.9-2 [939 kB] 2021-05-15T13:45:18.0530267Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 librubberband2 amd64 1.8.2-1build1 [89.4 kB] 2021-05-15T13:45:18.0556156Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswscale5 amd64 7:4.2.4-1ubuntu0.1 [156 kB] 2021-05-15T13:45:18.0607680Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libvidstab1.1 amd64 1.1.0-2 [35.0 kB] 2021-05-15T13:45:18.0636767Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavfilter7 amd64 7:4.2.4-1ubuntu0.1 [1084 kB] 2021-05-15T13:45:18.1072591Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcaca0 amd64 0.99.beta19-2.1ubuntu1.20.04.1 [202 kB] 2021-05-15T13:45:18.1102124Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio18 amd64 2.0.0-2 [58.6 kB] 2021-05-15T13:45:18.1112417Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-cdda2 amd64 10.2+2.0.0-1 [17.6 kB] 2021-05-15T13:45:18.1125293Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-paranoia2 amd64 10.2+2.0.0-1 [16.2 kB] 2021-05-15T13:45:18.1133105Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdc1394-22 amd64 2.2.5-2.1 [79.6 kB] 2021-05-15T13:45:18.1162463Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libiec61883-0 amd64 1.2.0-3 [24.3 kB] 2021-05-15T13:45:18.1170191Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjack-jackd2-0 amd64 1.9.12~dfsg-2ubuntu2 [267 kB] 2021-05-15T13:45:18.1208924Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal-data all 1:1.19.1-1 [162 kB] 2021-05-15T13:45:18.1262350Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsndio7.0 amd64 1.5.0-3 [24.5 kB] 2021-05-15T13:45:18.1269452Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal1 amd64 1:1.19.1-1 [492 kB] 2021-05-15T13:45:18.1376392Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasyncns0 amd64 0.8-6 [12.1 kB] 2021-05-15T13:45:18.1381993Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libflac8 amd64 1.3.3-1build1 [103 kB] 2021-05-15T13:45:18.1392087Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsndfile1 amd64 1.0.28-7 [170 kB] 2021-05-15T13:45:18.1412932Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libpulse0 amd64 1:13.99.1-1ubuntu3.10 [262 kB] 2021-05-15T13:45:18.1445788Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsdl2-2.0-0 amd64 2.0.10+dfsg1-3 [407 kB] 2021-05-15T13:45:18.1527309Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavdevice58 amd64 7:4.2.4-1ubuntu0.1 [74.3 kB] 2021-05-15T13:45:18.1541238Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavresample4 amd64 7:4.2.4-1ubuntu0.1 [54.2 kB] 2021-05-15T13:45:18.1558951Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 ffmpeg amd64 7:4.2.4-1ubuntu0.1 [1453 kB] 2021-05-15T13:45:18.1872235Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libigdgmm11 amd64 20.1.1+ds1-1 [111 kB] 2021-05-15T13:45:18.1899057Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 intel-media-va-driver amd64 20.1.1+dfsg1-1 [1764 kB] 2021-05-15T13:45:18.2368308Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaacs0 amd64 0.9.0-2 [50.1 kB] 2021-05-15T13:45:18.2382182Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbdplus0 amd64 0.1.2-3 [47.3 kB] 2021-05-15T13:45:18.2408458Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 mesa-va-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2618 kB] 2021-05-15T13:45:18.3193969Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-vdpau-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2744 kB] 2021-05-15T13:45:18.4010277Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 i965-va-driver amd64 2.4.0-0ubuntu1 [924 kB] 2021-05-15T13:45:18.4250326Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 va-driver-all amd64 2.7.0-2 [4020 B] 2021-05-15T13:45:18.4259811Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 vdpau-driver-all amd64 1.3-1ubuntu2 [4596 B] 2021-05-15T13:45:18.9714662Z Fetched 47.1 MB in 2s (30.0 MB/s) 2021-05-15T13:45:19.0059375Z Selecting previously unselected package libaom0:amd64. 2021-05-15T13:45:19.0114032Z (Reading database ... 2021-05-15T13:45:19.0114585Z (Reading database ... 5% 2021-05-15T13:45:19.0115033Z (Reading database ... 10% 2021-05-15T13:45:19.0115495Z (Reading database ... 15% 2021-05-15T13:45:19.0115964Z (Reading database ... 20% 2021-05-15T13:45:19.0116476Z (Reading database ... 25% 2021-05-15T13:45:19.0116918Z (Reading database ... 30% 2021-05-15T13:45:19.0117370Z (Reading database ... 35% 2021-05-15T13:45:19.0117810Z (Reading database ... 40% 2021-05-15T13:45:19.0118259Z (Reading database ... 45% 2021-05-15T13:45:19.0118699Z (Reading database ... 50% 2021-05-15T13:45:19.0149896Z (Reading database ... 55% 2021-05-15T13:45:19.0181611Z (Reading database ... 60% 2021-05-15T13:45:19.0217077Z (Reading database ... 65% 2021-05-15T13:45:19.0328718Z (Reading database ... 70% 2021-05-15T13:45:19.0434339Z (Reading database ... 75% 2021-05-15T13:45:19.0685577Z (Reading database ... 80% 2021-05-15T13:45:19.0996530Z (Reading database ... 85% 2021-05-15T13:45:19.1142974Z (Reading database ... 90% 2021-05-15T13:45:19.1220176Z (Reading database ... 95% 2021-05-15T13:45:19.1220691Z (Reading database ... 100% 2021-05-15T13:45:19.1221408Z (Reading database ... 266807 files and directories currently installed.) 2021-05-15T13:45:19.1349982Z Preparing to unpack .../00-libaom0_1.0.0.errata1-3build1_amd64.deb ... 2021-05-15T13:45:19.1371426Z Unpacking libaom0:amd64 (1.0.0.errata1-3build1) ... 2021-05-15T13:45:19.2738670Z Selecting previously unselected package libva2:amd64. 2021-05-15T13:45:19.2944801Z Preparing to unpack .../01-libva2_2.7.0-2_amd64.deb ... 2021-05-15T13:45:19.2985797Z Unpacking libva2:amd64 (2.7.0-2) ... 2021-05-15T13:45:19.3339513Z Selecting previously unselected package libva-drm2:amd64. 2021-05-15T13:45:19.3598059Z Preparing to unpack .../02-libva-drm2_2.7.0-2_amd64.deb ... 2021-05-15T13:45:19.3607445Z Unpacking libva-drm2:amd64 (2.7.0-2) ... 2021-05-15T13:45:19.3898784Z Selecting previously unselected package libva-x11-2:amd64. 2021-05-15T13:45:19.4124845Z Preparing to unpack .../03-libva-x11-2_2.7.0-2_amd64.deb ... 2021-05-15T13:45:19.4142522Z Unpacking libva-x11-2:amd64 (2.7.0-2) ... 2021-05-15T13:45:19.4538813Z Selecting previously unselected package libvdpau1:amd64. 2021-05-15T13:45:19.4804549Z Preparing to unpack .../04-libvdpau1_1.3-1ubuntu2_amd64.deb ... 2021-05-15T13:45:19.4815080Z Unpacking libvdpau1:amd64 (1.3-1ubuntu2) ... 2021-05-15T13:45:19.5218806Z Selecting previously unselected package ocl-icd-libopencl1:amd64. 2021-05-15T13:45:19.5492984Z Preparing to unpack .../05-ocl-icd-libopencl1_2.2.11-1ubuntu1_amd64.deb ... 2021-05-15T13:45:19.5504958Z Unpacking ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... 2021-05-15T13:45:19.5858560Z Selecting previously unselected package libavutil56:amd64. 2021-05-15T13:45:19.6115923Z Preparing to unpack .../06-libavutil56_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-05-15T13:45:19.6130884Z Unpacking libavutil56:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T13:45:19.6699425Z Selecting previously unselected package libcodec2-0.9:amd64. 2021-05-15T13:45:19.6971257Z Preparing to unpack .../07-libcodec2-0.9_0.9.2-2_amd64.deb ... 2021-05-15T13:45:19.7006842Z Unpacking libcodec2-0.9:amd64 (0.9.2-2) ... 2021-05-15T13:45:20.4137932Z Selecting previously unselected package libgsm1:amd64. 2021-05-15T13:45:20.4369477Z Preparing to unpack .../08-libgsm1_1.0.18-2_amd64.deb ... 2021-05-15T13:45:20.4392900Z Unpacking libgsm1:amd64 (1.0.18-2) ... 2021-05-15T13:45:20.4777761Z Selecting previously unselected package libmp3lame0:amd64. 2021-05-15T13:45:20.4996205Z Preparing to unpack .../09-libmp3lame0_3.100-3_amd64.deb ... 2021-05-15T13:45:20.5010964Z Unpacking 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previously unselected package libbdplus0:amd64. 2021-05-15T13:45:27.5937409Z Preparing to unpack .../70-libbdplus0_0.1.2-3_amd64.deb ... 2021-05-15T13:45:27.5938372Z Unpacking libbdplus0:amd64 (0.1.2-3) ... 2021-05-15T13:45:27.5939658Z Selecting previously unselected package mesa-va-drivers:amd64. 2021-05-15T13:45:27.5940993Z Preparing to unpack .../71-mesa-va-drivers_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-15T13:45:27.5942219Z Unpacking mesa-va-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-15T13:45:27.5944045Z Selecting previously unselected package mesa-vdpau-drivers:amd64. 2021-05-15T13:45:27.5945197Z Preparing to unpack .../72-mesa-vdpau-drivers_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-15T13:45:27.5946278Z Unpacking mesa-vdpau-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-15T13:45:27.6379115Z Selecting previously unselected package i965-va-driver:amd64. 2021-05-15T13:45:27.6617752Z Preparing to unpack .../73-i965-va-driver_2.4.0-0ubuntu1_amd64.deb ... 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2021-05-15T13:45:27.9618648Z Setting up libshine3:amd64 (3.1.1-2) ... 2021-05-15T13:45:27.9650588Z Setting up libcaca0:amd64 (0.99.beta19-2.1ubuntu1.20.04.1) ... 2021-05-15T13:45:27.9683927Z Setting up libtwolame0:amd64 (0.4.0-2) ... 2021-05-15T13:45:27.9736148Z Setting up libgsm1:amd64 (1.0.18-2) ... 2021-05-15T13:45:27.9777911Z Setting up libx264-155:amd64 (2:0.155.2917+git0a84d98-2) ... 2021-05-15T13:45:27.9814428Z Setting up libx265-179:amd64 (3.2.1-1build1) ... 2021-05-15T13:45:27.9850469Z Setting up libsoxr0:amd64 (0.1.3-2build1) ... 2021-05-15T13:45:27.9880775Z Setting up libaom0:amd64 (1.0.0.errata1-3build1) ... 2021-05-15T13:45:27.9923888Z Setting up libmysofa1:amd64 (1.0~dfsg0-1) ... 2021-05-15T13:45:27.9970910Z Setting up libdc1394-22:amd64 (2.2.5-2.1) ... 2021-05-15T13:45:28.0023058Z Setting up libcdio18:amd64 (2.0.0-2) ... 2021-05-15T13:45:28.0075818Z Setting up libxvidcore4:amd64 (2:1.3.7-1) ... 2021-05-15T13:45:28.0136193Z Setting up libsnappy1v5:amd64 (1.1.8-1build1) 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Setting up ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... 2021-05-15T13:45:28.0904532Z Setting up libasyncns0:amd64 (0.8-6) ... 2021-05-15T13:45:28.0933109Z Setting up libvdpau1:amd64 (1.3-1ubuntu2) ... 2021-05-15T13:45:28.0974686Z Setting up libwavpack1:amd64 (5.2.0-1ubuntu0.1) ... 2021-05-15T13:45:28.1006724Z Setting up libbs2b0:amd64 (3.1.0+dfsg-2.2build1) ... 2021-05-15T13:45:28.1035542Z Setting up libtheora0:amd64 (1.1.1+dfsg.1-15ubuntu2) ... 2021-05-15T13:45:28.1066554Z Setting up libopenal-data (1:1.19.1-1) ... 2021-05-15T13:45:28.1103232Z Setting up mesa-va-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-15T13:45:28.1133488Z Setting up libbluray2:amd64 (1:1.2.0-1) ... 2021-05-15T13:45:28.1159826Z Setting up libsamplerate0:amd64 (0.1.9-2) ... 2021-05-15T13:45:28.1187151Z Setting up libva-x11-2:amd64 (2.7.0-2) ... 2021-05-15T13:45:28.1217257Z Setting up libopenmpt0:amd64 (0.4.11-1build1) ... 2021-05-15T13:45:28.1305473Z Setting up libzvbi-common (0.2.35-17) ... 2021-05-15T13:45:28.1328751Z Setting up libmp3lame0:amd64 (3.100-3) ... 2021-05-15T13:45:28.1382627Z Setting up i965-va-driver:amd64 (2.4.0-0ubuntu1) ... 2021-05-15T13:45:28.1454153Z Setting up libvorbisenc2:amd64 (1.3.6-2ubuntu1) ... 2021-05-15T13:45:28.1521815Z Setting up libiec61883-0:amd64 (1.2.0-3) ... 2021-05-15T13:45:28.1563208Z Setting up libserd-0-0:amd64 (0.30.2-1) ... 2021-05-15T13:45:28.1622365Z Setting up libavc1394-0:amd64 (0.5.4-5) ... 2021-05-15T13:45:28.1678541Z Setting up mesa-vdpau-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-15T13:45:28.1722780Z Setting up libzvbi0:amd64 (0.2.35-17) ... 2021-05-15T13:45:28.1781001Z Setting up libcdio-cdda2:amd64 (10.2+2.0.0-1) ... 2021-05-15T13:45:28.1829456Z Setting up libcdio-paranoia2:amd64 (10.2+2.0.0-1) ... 2021-05-15T13:45:28.1867972Z Setting up libopenal1:amd64 (1:1.19.1-1) ... 2021-05-15T13:45:28.1898617Z Setting up libavutil56:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T13:45:28.1928353Z Setting up va-driver-all:amd64 (2.7.0-2) ... 2021-05-15T13:45:28.1968499Z Setting up libpostproc55:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T13:45:28.2010366Z Setting up librubberband2:amd64 (1.8.2-1build1) ... 2021-05-15T13:45:28.2058134Z Setting up libjack-jackd2-0:amd64 (1.9.12~dfsg-2ubuntu2) ... 2021-05-15T13:45:28.2087266Z Setting up vdpau-driver-all:amd64 (1.3-1ubuntu2) ... 2021-05-15T13:45:28.2159399Z Setting up libsord-0-0:amd64 (0.16.4-1) ... 2021-05-15T13:45:28.2190672Z Setting up libsratom-0-0:amd64 (0.6.4-1) ... 2021-05-15T13:45:28.2236473Z Setting up libswscale5:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T13:45:28.2308334Z Setting up libsndfile1:amd64 (1.0.28-7) ... 2021-05-15T13:45:28.2345464Z Setting up liblilv-0-0:amd64 (0.24.6-1ubuntu0.1) ... 2021-05-15T13:45:28.2383266Z Setting up libpulse0:amd64 (1:13.99.1-1ubuntu3.10) ... 2021-05-15T13:45:28.2486190Z Setting up libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T13:45:28.2535013Z Setting up libavresample4:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T13:45:28.2593913Z Setting up libavcodec58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T13:45:28.2635502Z Setting up libsdl2-2.0-0:amd64 (2.0.10+dfsg1-3) ... 2021-05-15T13:45:28.2664060Z Setting up libchromaprint1:amd64 (1.4.3-3build1) ... 2021-05-15T13:45:28.2697568Z Setting up libavformat58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T13:45:28.2752263Z Setting up libavfilter7:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T13:45:28.2785078Z Setting up libavdevice58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-15T13:45:28.2818610Z Setting up ffmpeg (7:4.2.4-1ubuntu0.1) ... 2021-05-15T13:45:28.2913178Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:45:29.3168314Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:45:31.2928995Z Reading package lists... 2021-05-15T13:45:31.4610480Z Building dependency tree... 2021-05-15T13:45:31.4628308Z Reading state information... 2021-05-15T13:45:31.6092228Z The following additional packages will be installed: 2021-05-15T13:45:31.6094771Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-05-15T13:45:31.6597605Z The following NEW packages will be installed: 2021-05-15T13:45:31.6599550Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-05-15T13:45:31.6604266Z libmagick++-dev 2021-05-15T13:45:31.6817604Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:45:31.6818700Z Need to get 309 kB of archives. 2021-05-15T13:45:31.6820008Z After this operation, 2202 kB of additional disk space will be used. 2021-05-15T13:45:31.6822614Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6-headers all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [47.5 kB] 2021-05-15T13:45:31.6844594Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-8 amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [133 kB] 2021-05-15T13:45:31.6860877Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-dev amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [127 kB] 2021-05-15T13:45:31.6875241Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-dev all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [1404 B] 2021-05-15T13:45:32.0793491Z Fetched 309 kB in 0s (13.3 MB/s) 2021-05-15T13:45:32.1188270Z Selecting previously unselected package libmagick++-6-headers. 2021-05-15T13:45:32.1264452Z (Reading database ... 2021-05-15T13:45:32.1264941Z (Reading database ... 5% 2021-05-15T13:45:32.1265454Z (Reading database ... 10% 2021-05-15T13:45:32.1266522Z (Reading database ... 15% 2021-05-15T13:45:32.1266984Z (Reading database ... 20% 2021-05-15T13:45:32.1267560Z (Reading database ... 25% 2021-05-15T13:45:32.1268110Z (Reading database ... 30% 2021-05-15T13:45:32.1268653Z (Reading database ... 35% 2021-05-15T13:45:32.1269186Z (Reading database ... 40% 2021-05-15T13:45:32.1269735Z (Reading database ... 45% 2021-05-15T13:45:32.1270272Z (Reading database ... 50% 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Preparing to unpack .../libmagick++-6.q16-8_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-05-15T13:45:32.3522349Z Unpacking libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-15T13:45:32.3978570Z Selecting previously unselected package libmagick++-6.q16-dev:amd64. 2021-05-15T13:45:32.4213408Z Preparing to unpack .../libmagick++-6.q16-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-05-15T13:45:32.4236417Z Unpacking libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-15T13:45:32.4901836Z Selecting previously unselected package libmagick++-dev. 2021-05-15T13:45:32.5189254Z Preparing to unpack .../libmagick++-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_all.deb ... 2021-05-15T13:45:32.5276792Z Unpacking libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-15T13:45:32.5928038Z Setting up libmagick++-6-headers (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-15T13:45:32.6083503Z Setting up libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-15T13:45:32.6182382Z Setting up libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-15T13:45:32.6258634Z Setting up libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-15T13:45:32.6420294Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:45:34.6097678Z Reading package lists... 2021-05-15T13:45:34.7776247Z Building dependency tree... 2021-05-15T13:45:34.7796264Z Reading state information... 2021-05-15T13:45:34.9291490Z imagemagick is already the newest version (8:6.9.10.23+dfsg-2.1ubuntu11.2). 2021-05-15T13:45:34.9293395Z The following additional packages will be installed: 2021-05-15T13:45:34.9295230Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 libgs9 libgs9-common 2021-05-15T13:45:34.9297133Z libijs-0.35 libjbig2dec0 2021-05-15T13:45:34.9302813Z Suggested packages: 2021-05-15T13:45:34.9304601Z fonts-noto fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre 2021-05-15T13:45:34.9305537Z ghostscript-x 2021-05-15T13:45:34.9774772Z The following NEW packages will be installed: 2021-05-15T13:45:34.9777350Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 ghostscript libgs9 2021-05-15T13:45:34.9783038Z libgs9-common libijs-0.35 libjbig2dec0 2021-05-15T13:45:34.9968042Z 0 upgraded, 8 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:45:34.9968777Z Need to get 11.2 MB of archives. 2021-05-15T13:45:34.9969473Z After this operation, 39.1 MB of additional disk space will be used. 2021-05-15T13:45:34.9971269Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-droid-fallback all 1:6.0.1r16-1.1 [1805 kB] 2021-05-15T13:45:35.0308895Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 fonts-noto-mono all 20200323-1build1~ubuntu20.04.1 [80.6 kB] 2021-05-15T13:45:35.0324842Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-urw-base35 all 20170801.1-3 [6333 kB] 2021-05-15T13:45:35.1509109Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9-common all 9.50~dfsg-5ubuntu4.2 [681 kB] 2021-05-15T13:45:35.1607262Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libijs-0.35 amd64 0.35-15 [15.7 kB] 2021-05-15T13:45:35.1615116Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjbig2dec0 amd64 0.18-1ubuntu1 [60.0 kB] 2021-05-15T13:45:35.1632572Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9 amd64 9.50~dfsg-5ubuntu4.2 [2172 kB] 2021-05-15T13:45:35.1949523Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 ghostscript amd64 9.50~dfsg-5ubuntu4.2 [51.6 kB] 2021-05-15T13:45:35.5965954Z Fetched 11.2 MB in 0s (52.5 MB/s) 2021-05-15T13:45:35.6365405Z Selecting previously unselected package fonts-droid-fallback. 2021-05-15T13:45:35.6440955Z (Reading database ... 2021-05-15T13:45:35.6441837Z (Reading database ... 5% 2021-05-15T13:45:35.6442512Z (Reading 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... 100% 2021-05-15T13:45:35.7636088Z (Reading database ... 267393 files and directories currently installed.) 2021-05-15T13:45:35.7767844Z Preparing to unpack .../0-fonts-droid-fallback_1%3a6.0.1r16-1.1_all.deb ... 2021-05-15T13:45:35.8009556Z Unpacking fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-05-15T13:45:36.0059290Z Selecting previously unselected package fonts-noto-mono. 2021-05-15T13:45:36.0275966Z Preparing to unpack .../1-fonts-noto-mono_20200323-1build1~ubuntu20.04.1_all.deb ... 2021-05-15T13:45:36.0311852Z Unpacking fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-05-15T13:45:36.0779005Z Selecting previously unselected package fonts-urw-base35. 2021-05-15T13:45:36.0981810Z Preparing to unpack .../2-fonts-urw-base35_20170801.1-3_all.deb ... 2021-05-15T13:45:36.1575760Z Unpacking fonts-urw-base35 (20170801.1-3) ... 2021-05-15T13:45:36.5329385Z Selecting previously unselected package libgs9-common. 2021-05-15T13:45:36.5617110Z Preparing to unpack .../3-libgs9-common_9.50~dfsg-5ubuntu4.2_all.deb ... 2021-05-15T13:45:36.5636928Z Unpacking libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-05-15T13:45:36.6658881Z Selecting previously unselected package libijs-0.35:amd64. 2021-05-15T13:45:36.6918760Z Preparing to unpack .../4-libijs-0.35_0.35-15_amd64.deb ... 2021-05-15T13:45:36.6972238Z Unpacking libijs-0.35:amd64 (0.35-15) ... 2021-05-15T13:45:36.7350298Z Selecting previously unselected package libjbig2dec0:amd64. 2021-05-15T13:45:36.7641914Z Preparing to unpack .../5-libjbig2dec0_0.18-1ubuntu1_amd64.deb ... 2021-05-15T13:45:36.7671528Z Unpacking libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-05-15T13:45:36.8110513Z Selecting previously unselected package libgs9:amd64. 2021-05-15T13:45:36.8400072Z Preparing to unpack .../6-libgs9_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-05-15T13:45:36.8424260Z Unpacking libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-05-15T13:45:37.1095888Z Selecting previously unselected package ghostscript. 2021-05-15T13:45:37.1328487Z Preparing to unpack .../7-ghostscript_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-05-15T13:45:37.1368135Z Unpacking ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-05-15T13:45:37.2084632Z Setting up fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-05-15T13:45:37.2216504Z Setting up libijs-0.35:amd64 (0.35-15) ... 2021-05-15T13:45:37.2283586Z Setting up fonts-urw-base35 (20170801.1-3) ... 2021-05-15T13:45:37.2892902Z Setting up libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-05-15T13:45:37.2970695Z Setting up fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-05-15T13:45:37.3220324Z Setting up libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-05-15T13:45:37.3272279Z Setting up libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-05-15T13:45:37.3359645Z Setting up ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-05-15T13:45:37.3595995Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-15T13:45:37.4615745Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:45:37.4887931Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:45:40.2855488Z Reading package lists... 2021-05-15T13:45:40.4508645Z Building dependency tree... 2021-05-15T13:45:40.4527658Z Reading state information... 2021-05-15T13:45:40.6004588Z The following additional packages will be installed: 2021-05-15T13:45:40.6006594Z libudunits2-0 libudunits2-data 2021-05-15T13:45:40.6436955Z The following NEW packages will be installed: 2021-05-15T13:45:40.6439066Z libudunits2-0 libudunits2-data libudunits2-dev 2021-05-15T13:45:40.6620713Z 0 upgraded, 3 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:45:40.6621927Z Need to get 429 kB of archives. 2021-05-15T13:45:40.6623062Z After this operation, 1026 kB of additional disk space will be used. 2021-05-15T13:45:40.6624923Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-data all 2.2.26-5 [18.8 kB] 2021-05-15T13:45:40.6640631Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-0 amd64 2.2.26-5 [48.9 kB] 2021-05-15T13:45:40.6650676Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-dev amd64 2.2.26-5 [362 kB] 2021-05-15T13:45:41.0634754Z Fetched 429 kB in 0s (18.4 MB/s) 2021-05-15T13:45:41.0938260Z Selecting previously unselected package libudunits2-data. 2021-05-15T13:45:41.1012785Z (Reading database ... 2021-05-15T13:45:41.1013628Z (Reading database ... 5% 2021-05-15T13:45:41.1014286Z (Reading database ... 10% 2021-05-15T13:45:41.1014928Z (Reading database ... 15% 2021-05-15T13:45:41.1015560Z (Reading database ... 20% 2021-05-15T13:45:41.1016176Z (Reading database ... 25% 2021-05-15T13:45:41.1017514Z (Reading database ... 30% 2021-05-15T13:45:41.1018198Z (Reading database ... 35% 2021-05-15T13:45:41.1018819Z (Reading database ... 40% 2021-05-15T13:45:41.1019656Z (Reading database ... 45% 2021-05-15T13:45:41.1020307Z (Reading database ... 50% 2021-05-15T13:45:41.1057445Z (Reading database ... 55% 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(2.2.26-5) ... 2021-05-15T13:45:41.3339301Z Selecting previously unselected package libudunits2-dev:amd64. 2021-05-15T13:45:41.3601003Z Preparing to unpack .../libudunits2-dev_2.2.26-5_amd64.deb ... 2021-05-15T13:45:41.3615753Z Unpacking libudunits2-dev:amd64 (2.2.26-5) ... 2021-05-15T13:45:41.4433282Z Setting up libudunits2-data (2.2.26-5) ... 2021-05-15T13:45:41.4506211Z Setting up libudunits2-0:amd64 (2.2.26-5) ... 2021-05-15T13:45:41.4585794Z Setting up libudunits2-dev:amd64 (2.2.26-5) ... 2021-05-15T13:45:41.4684861Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-15T13:45:41.5753963Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:45:43.5037780Z Reading package lists... 2021-05-15T13:45:43.6635803Z Building dependency tree... 2021-05-15T13:45:43.6653935Z Reading state information... 2021-05-15T13:45:43.8564953Z The following NEW packages will be installed: 2021-05-15T13:45:43.8568253Z libjq-dev 2021-05-15T13:45:43.8763770Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:45:43.8764486Z Need to get 11.2 kB of archives. 2021-05-15T13:45:43.8765163Z After this operation, 47.1 kB of additional disk space will be used. 2021-05-15T13:45:43.8766986Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libjq-dev amd64 1.6-1ubuntu0.20.04.1 [11.2 kB] 2021-05-15T13:45:44.2647589Z Fetched 11.2 kB in 0s (706 kB/s) 2021-05-15T13:45:44.2933058Z Selecting previously unselected package libjq-dev:amd64. 2021-05-15T13:45:44.3005713Z (Reading database ... 2021-05-15T13:45:44.3006516Z (Reading database ... 5% 2021-05-15T13:45:44.3007175Z (Reading database ... 10% 2021-05-15T13:45:44.3007802Z (Reading database ... 15% 2021-05-15T13:45:44.3008444Z (Reading database ... 20% 2021-05-15T13:45:44.3009074Z (Reading database ... 25% 2021-05-15T13:45:44.3009689Z (Reading database ... 30% 2021-05-15T13:45:44.3010321Z (Reading database ... 35% 2021-05-15T13:45:44.3010964Z (Reading database ... 40% 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(1.6-1ubuntu0.20.04.1) ... 2021-05-15T13:45:46.3741641Z Reading package lists... 2021-05-15T13:45:46.5323372Z Building dependency tree... 2021-05-15T13:45:46.5341464Z Reading state information... 2021-05-15T13:45:46.7222646Z The following NEW packages will be installed: 2021-05-15T13:45:46.7226635Z libmng2 2021-05-15T13:45:46.7428815Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:45:46.7429575Z Need to get 168 kB of archives. 2021-05-15T13:45:46.7430294Z After this operation, 571 kB of additional disk space will be used. 2021-05-15T13:45:46.7431996Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmng2 amd64 2.0.3+dfsg-3 [168 kB] 2021-05-15T13:45:47.1344303Z Fetched 168 kB in 0s (7815 kB/s) 2021-05-15T13:45:47.1658622Z Selecting previously unselected package libmng2:amd64. 2021-05-15T13:45:47.1708927Z (Reading database ... 2021-05-15T13:45:47.1709708Z (Reading database ... 5% 2021-05-15T13:45:47.1710472Z (Reading database ... 10% 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2021-05-15T13:45:47.2775199Z (Reading database ... 267992 files and directories currently installed.) 2021-05-15T13:45:47.2903450Z Preparing to unpack .../libmng2_2.0.3+dfsg-3_amd64.deb ... 2021-05-15T13:45:47.2944271Z Unpacking libmng2:amd64 (2.0.3+dfsg-3) ... 2021-05-15T13:45:47.3758714Z Setting up libmng2:amd64 (2.0.3+dfsg-3) ... 2021-05-15T13:45:47.3807238Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:45:49.3455547Z Reading package lists... 2021-05-15T13:45:49.5062312Z Building dependency tree... 2021-05-15T13:45:49.5083508Z Reading state information... 2021-05-15T13:45:49.6277350Z E: Unable to locate package libmng1 2021-05-15T13:45:49.6892336Z Reading package lists... 2021-05-15T13:45:49.8598084Z Building dependency tree... 2021-05-15T13:45:49.8618716Z Reading state information... 2021-05-15T13:45:49.9893769Z E: Unable to locate package libapparmor-devel 2021-05-15T13:45:50.0506518Z Reading package lists... 2021-05-15T13:45:50.2208696Z Building dependency tree... 2021-05-15T13:45:50.2227267Z Reading state information... 2021-05-15T13:45:50.3730810Z The following additional packages will be installed: 2021-05-15T13:45:50.3733904Z libij-java 2021-05-15T13:45:50.4209220Z The following NEW packages will be installed: 2021-05-15T13:45:50.4221423Z imagej libij-java 2021-05-15T13:45:50.4429581Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:45:50.4430594Z Need to get 2328 kB of archives. 2021-05-15T13:45:50.4431556Z After this operation, 2498 kB of additional disk space will be used. 2021-05-15T13:45:50.4433531Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libij-java all 1.52r-1 [2284 kB] 2021-05-15T13:45:50.4849970Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 imagej all 1.52r-1 [43.7 kB] 2021-05-15T13:45:50.8827415Z Fetched 2328 kB in 0s (39.6 MB/s) 2021-05-15T13:45:50.9179336Z Selecting previously unselected package libij-java. 2021-05-15T13:45:50.9221517Z (Reading 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lists... 2021-05-15T13:45:55.7378540Z Building dependency tree... 2021-05-15T13:45:55.7396962Z Reading state information... 2021-05-15T13:45:55.8944158Z Suggested packages: 2021-05-15T13:45:55.8947152Z bowtie2-examples 2021-05-15T13:45:55.9388424Z The following NEW packages will be installed: 2021-05-15T13:45:55.9399984Z bowtie2 2021-05-15T13:45:55.9598973Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:45:55.9600128Z Need to get 1324 kB of archives. 2021-05-15T13:45:55.9601145Z After this operation, 5630 kB of additional disk space will be used. 2021-05-15T13:45:55.9603100Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 bowtie2 amd64 2.3.5.1-6build1 [1324 kB] 2021-05-15T13:45:56.3963159Z Fetched 1324 kB in 0s (25.4 MB/s) 2021-05-15T13:45:56.4247932Z Selecting previously unselected package bowtie2. 2021-05-15T13:45:56.4325325Z (Reading database ... 2021-05-15T13:45:56.4326190Z (Reading database ... 5% 2021-05-15T13:45:56.4326860Z (Reading database ... 10% 2021-05-15T13:45:56.4327518Z (Reading database ... 15% 2021-05-15T13:45:56.4328150Z (Reading database ... 20% 2021-05-15T13:45:56.4328816Z (Reading database ... 25% 2021-05-15T13:45:56.4329435Z (Reading database ... 30% 2021-05-15T13:45:56.4330062Z (Reading database ... 35% 2021-05-15T13:45:56.4330696Z (Reading database ... 40% 2021-05-15T13:45:56.4331327Z (Reading database ... 45% 2021-05-15T13:45:56.4331948Z (Reading database ... 50% 2021-05-15T13:45:56.4369231Z (Reading database ... 55% 2021-05-15T13:45:56.4415048Z (Reading database ... 60% 2021-05-15T13:45:56.4441085Z (Reading database ... 65% 2021-05-15T13:45:56.4569341Z (Reading database ... 70% 2021-05-15T13:45:56.4691615Z (Reading database ... 75% 2021-05-15T13:45:56.4715560Z (Reading database ... 80% 2021-05-15T13:45:56.5254364Z (Reading database ... 85% 2021-05-15T13:45:56.5430356Z (Reading database ... 90% 2021-05-15T13:45:56.5512846Z (Reading database ... 95% 2021-05-15T13:45:56.5513452Z (Reading database ... 100% 2021-05-15T13:45:56.5514258Z (Reading database ... 268021 files and directories currently installed.) 2021-05-15T13:45:56.5646194Z Preparing to unpack .../bowtie2_2.3.5.1-6build1_amd64.deb ... 2021-05-15T13:45:56.5667632Z Unpacking bowtie2 (2.3.5.1-6build1) ... 2021-05-15T13:45:56.7574345Z Setting up bowtie2 (2.3.5.1-6build1) ... 2021-05-15T13:45:56.7689098Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:45:59.5009152Z Reading package lists... 2021-05-15T13:45:59.6659182Z Building dependency tree... 2021-05-15T13:45:59.6680095Z Reading state information... 2021-05-15T13:45:59.7866234Z E: Unable to locate package install 2021-05-15T13:45:59.7867356Z E: Unable to locate package gdal 2021-05-15T13:45:59.8477814Z Reading package lists... 2021-05-15T13:46:00.0114241Z Building dependency tree... 2021-05-15T13:46:00.0133461Z Reading state information... 2021-05-15T13:46:00.0400240Z Package insighttoolkit4-python is not available, but is referred to by another package. 2021-05-15T13:46:00.0401912Z This may mean that the package is missing, has been obsoleted, or 2021-05-15T13:46:00.0402825Z is only available from another source 2021-05-15T13:46:00.0403341Z 2021-05-15T13:46:00.1343557Z E: Package 'insighttoolkit4-python' has no installation candidate 2021-05-15T13:46:00.1955822Z Reading package lists... 2021-05-15T13:46:00.3624677Z Building dependency tree... 2021-05-15T13:46:00.3644627Z Reading state information... 2021-05-15T13:46:00.3886550Z Package libav-tools is not available, but is referred to by another package. 2021-05-15T13:46:00.3888088Z This may mean that the package is missing, has been obsoleted, or 2021-05-15T13:46:00.3889095Z is only available from another source 2021-05-15T13:46:00.3890063Z However the following packages replace it: 2021-05-15T13:46:00.3890821Z ffmpeg 2021-05-15T13:46:00.3891367Z 2021-05-15T13:46:00.4851200Z E: Package 'libav-tools' has no installation candidate 2021-05-15T13:46:00.5461392Z Reading package lists... 2021-05-15T13:46:00.7087913Z Building dependency tree... 2021-05-15T13:46:00.7107239Z Reading state information... 2021-05-15T13:46:00.8582857Z The following additional packages will be installed: 2021-05-15T13:46:00.8585332Z libgcrypt20-dev libgit2-28 libgpg-error-dev libhttp-parser-dev 2021-05-15T13:46:00.8587282Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-05-15T13:46:00.8588552Z libssh2-1-dev 2021-05-15T13:46:00.8589660Z Suggested packages: 2021-05-15T13:46:00.8590730Z libgcrypt20-doc libmbedtls-doc 2021-05-15T13:46:00.9052853Z The following NEW packages will be installed: 2021-05-15T13:46:00.9055420Z libgcrypt20-dev libgit2-28 libgit2-dev libgpg-error-dev libhttp-parser-dev 2021-05-15T13:46:00.9057726Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-05-15T13:46:00.9059173Z libssh2-1-dev 2021-05-15T13:46:00.9265749Z 0 upgraded, 11 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:46:00.9266440Z Need to get 2667 kB of archives. 2021-05-15T13:46:00.9267596Z After this operation, 11.2 MB of additional disk space will be used. 2021-05-15T13:46:00.9269357Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgpg-error-dev amd64 1.37-1 [109 kB] 2021-05-15T13:46:00.9310603Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcrypt20-dev amd64 1.8.5-5ubuntu1 [470 kB] 2021-05-15T13:46:00.9417509Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser2.9 amd64 2.9.2-2 [21.8 kB] 2021-05-15T13:46:00.9423761Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedcrypto3 amd64 2.16.4-1ubuntu2 [150 kB] 2021-05-15T13:46:00.9461892Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedx509-0 amd64 2.16.4-1ubuntu2 [42.3 kB] 2021-05-15T13:46:00.9471306Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls12 amd64 2.16.4-1ubuntu2 [71.8 kB] 2021-05-15T13:46:00.9475006Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-28 amd64 0.28.4+dfsg.1-2 [403 kB] 2021-05-15T13:46:00.9521975Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls-dev amd64 2.16.4-1ubuntu2 [444 kB] 2021-05-15T13:46:00.9564136Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libssh2-1-dev amd64 1.8.0-2.1build1 [244 kB] 2021-05-15T13:46:00.9588481Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser-dev amd64 2.9.2-2 [20.2 kB] 2021-05-15T13:46:00.9593305Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-dev amd64 0.28.4+dfsg.1-2 [691 kB] 2021-05-15T13:46:01.3663781Z Fetched 2667 kB in 0s (46.4 MB/s) 2021-05-15T13:46:01.3981818Z Selecting previously unselected package libgpg-error-dev. 2021-05-15T13:46:01.4058669Z (Reading database ... 2021-05-15T13:46:01.4059524Z (Reading database ... 5% 2021-05-15T13:46:01.4060168Z (Reading database 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2021-05-15T13:46:01.5241519Z (Reading database ... 268047 files and directories currently installed.) 2021-05-15T13:46:01.5378123Z Preparing to unpack .../00-libgpg-error-dev_1.37-1_amd64.deb ... 2021-05-15T13:46:01.5403593Z Unpacking libgpg-error-dev (1.37-1) ... 2021-05-15T13:46:01.5883292Z Selecting previously unselected package libgcrypt20-dev. 2021-05-15T13:46:01.6173152Z Preparing to unpack .../01-libgcrypt20-dev_1.8.5-5ubuntu1_amd64.deb ... 2021-05-15T13:46:01.6196594Z Unpacking libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-05-15T13:46:01.7059790Z Selecting previously unselected package libhttp-parser2.9:amd64. 2021-05-15T13:46:01.7310886Z Preparing to unpack .../02-libhttp-parser2.9_2.9.2-2_amd64.deb ... 2021-05-15T13:46:01.7407818Z Unpacking libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-05-15T13:46:01.7899042Z Selecting previously unselected package libmbedcrypto3:amd64. 2021-05-15T13:46:01.8195220Z Preparing to unpack .../03-libmbedcrypto3_2.16.4-1ubuntu2_amd64.deb ... 2021-05-15T13:46:01.8214567Z Unpacking libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-05-15T13:46:01.8819326Z Selecting previously unselected package libmbedx509-0:amd64. 2021-05-15T13:46:01.9036920Z Preparing to unpack .../04-libmbedx509-0_2.16.4-1ubuntu2_amd64.deb ... 2021-05-15T13:46:01.9058048Z Unpacking libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-05-15T13:46:01.9451762Z Selecting previously unselected package libmbedtls12:amd64. 2021-05-15T13:46:01.9745588Z Preparing to unpack .../05-libmbedtls12_2.16.4-1ubuntu2_amd64.deb ... 2021-05-15T13:46:01.9786586Z Unpacking libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-05-15T13:46:02.0164074Z Selecting previously unselected package libgit2-28:amd64. 2021-05-15T13:46:02.0452290Z Preparing to unpack .../06-libgit2-28_0.28.4+dfsg.1-2_amd64.deb ... 2021-05-15T13:46:02.0475811Z Unpacking libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-05-15T13:46:02.1219565Z Selecting previously unselected package libmbedtls-dev:amd64. 2021-05-15T13:46:02.1472372Z Preparing to unpack .../07-libmbedtls-dev_2.16.4-1ubuntu2_amd64.deb ... 2021-05-15T13:46:02.1495078Z Unpacking libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-05-15T13:46:02.2259674Z Selecting previously unselected package libssh2-1-dev:amd64. 2021-05-15T13:46:02.2529618Z Preparing to unpack .../08-libssh2-1-dev_1.8.0-2.1build1_amd64.deb ... 2021-05-15T13:46:02.2555877Z Unpacking libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-05-15T13:46:02.3219561Z Selecting previously unselected package libhttp-parser-dev. 2021-05-15T13:46:02.3482556Z Preparing to unpack .../09-libhttp-parser-dev_2.9.2-2_amd64.deb ... 2021-05-15T13:46:02.3538190Z Unpacking libhttp-parser-dev (2.9.2-2) ... 2021-05-15T13:46:02.3819726Z Selecting previously unselected package libgit2-dev:amd64. 2021-05-15T13:46:02.4090995Z Preparing to unpack .../10-libgit2-dev_0.28.4+dfsg.1-2_amd64.deb ... 2021-05-15T13:46:02.4121810Z Unpacking libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-05-15T13:46:02.5377081Z Setting up libgpg-error-dev (1.37-1) ... 2021-05-15T13:46:02.5482921Z Setting up libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-05-15T13:46:02.5572541Z Setting up libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-05-15T13:46:02.5623879Z Setting up libhttp-parser-dev (2.9.2-2) ... 2021-05-15T13:46:02.5683437Z Setting up libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-05-15T13:46:02.5778947Z Setting up libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-05-15T13:46:02.5826357Z Setting up libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-05-15T13:46:02.5901384Z Setting up libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-05-15T13:46:02.5998180Z Setting up libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-05-15T13:46:02.6086424Z Setting up libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-05-15T13:46:02.6191803Z Setting up libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-05-15T13:46:02.6278798Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:46:07.2458901Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-15T13:46:07.3559285Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:46:09.2682256Z Reading package lists... 2021-05-15T13:46:09.4293822Z Building dependency tree... 2021-05-15T13:46:09.4312354Z Reading state information... 2021-05-15T13:46:09.6657306Z libtiff-dev is already the newest version (4.1.0+git191117-2ubuntu0.20.04.1). 2021-05-15T13:46:09.6658652Z libtiff-dev set to manually installed. 2021-05-15T13:46:09.6659597Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:46:09.7267163Z Reading package lists... 2021-05-15T13:46:09.8890044Z Building dependency tree... 2021-05-15T13:46:09.8910807Z Reading state information... 2021-05-15T13:46:10.1095001Z unixodbc-dev is already the newest version (2.3.7). 2021-05-15T13:46:10.1095959Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:46:10.1654881Z Reading package lists... 2021-05-15T13:46:10.3199074Z Building dependency tree... 2021-05-15T13:46:10.3215749Z Reading state information... 2021-05-15T13:46:10.5041016Z The following NEW packages will be installed: 2021-05-15T13:46:10.5043676Z libsodium-dev 2021-05-15T13:46:10.5242345Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:46:10.5243262Z Need to get 169 kB of archives. 2021-05-15T13:46:10.5244331Z After this operation, 826 kB of additional disk space will be used. 2021-05-15T13:46:10.5246081Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsodium-dev amd64 1.0.18-1 [169 kB] 2021-05-15T13:46:10.9020885Z Fetched 169 kB in 0s (8752 kB/s) 2021-05-15T13:46:10.9348474Z Selecting previously unselected package libsodium-dev:amd64. 2021-05-15T13:46:10.9416956Z (Reading database ... 2021-05-15T13:46:10.9417867Z (Reading database ... 5% 2021-05-15T13:46:10.9418462Z (Reading database ... 10% 2021-05-15T13:46:10.9419100Z (Reading database ... 15% 2021-05-15T13:46:10.9419657Z (Reading database ... 20% 2021-05-15T13:46:10.9420278Z (Reading database ... 25% 2021-05-15T13:46:10.9421038Z (Reading database ... 30% 2021-05-15T13:46:10.9421608Z (Reading database ... 35% 2021-05-15T13:46:10.9422161Z (Reading database ... 40% 2021-05-15T13:46:10.9422714Z (Reading database ... 45% 2021-05-15T13:46:10.9423276Z (Reading database ... 50% 2021-05-15T13:46:10.9456883Z (Reading database ... 55% 2021-05-15T13:46:10.9499294Z (Reading database ... 60% 2021-05-15T13:46:10.9521518Z (Reading database ... 65% 2021-05-15T13:46:10.9636434Z (Reading database ... 70% 2021-05-15T13:46:10.9745761Z (Reading database ... 75% 2021-05-15T13:46:10.9767062Z (Reading database ... 80% 2021-05-15T13:46:11.0260726Z (Reading database ... 85% 2021-05-15T13:46:11.0415815Z (Reading database ... 90% 2021-05-15T13:46:11.0490844Z (Reading database ... 95% 2021-05-15T13:46:11.0491420Z (Reading database ... 100% 2021-05-15T13:46:11.0492240Z (Reading database ... 268550 files and directories currently installed.) 2021-05-15T13:46:11.0623289Z Preparing to unpack .../libsodium-dev_1.0.18-1_amd64.deb ... 2021-05-15T13:46:11.0645111Z Unpacking libsodium-dev:amd64 (1.0.18-1) ... 2021-05-15T13:46:11.1434746Z Setting up libsodium-dev:amd64 (1.0.18-1) ... 2021-05-15T13:46:12.9974107Z Reading package lists... 2021-05-15T13:46:13.1663251Z Building dependency tree... 2021-05-15T13:46:13.1682445Z Reading state information... 2021-05-15T13:46:13.3158069Z The following additional packages will be installed: 2021-05-15T13:46:13.3161399Z libarchive-dev liblept5 libtesseract4 tesseract-ocr tesseract-ocr-osd 2021-05-15T13:46:13.3631005Z The following NEW packages will be installed: 2021-05-15T13:46:13.3636371Z libarchive-dev liblept5 libleptonica-dev libtesseract-dev libtesseract4 2021-05-15T13:46:13.3637869Z tesseract-ocr tesseract-ocr-eng tesseract-ocr-osd 2021-05-15T13:46:13.3840038Z 0 upgraded, 8 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:46:13.3840948Z Need to get 10.4 MB of archives. 2021-05-15T13:46:13.3842121Z After this operation, 38.0 MB of additional disk space will be used. 2021-05-15T13:46:13.3844097Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-dev amd64 3.4.0-2ubuntu1 [490 kB] 2021-05-15T13:46:13.3945636Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblept5 amd64 1.79.0-1 [999 kB] 2021-05-15T13:46:13.4110930Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libleptonica-dev amd64 1.79.0-1 [1389 kB] 2021-05-15T13:46:13.4314598Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract4 amd64 4.1.1-2build2 [1237 kB] 2021-05-15T13:46:13.4549141Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract-dev amd64 4.1.1-2build2 [1463 kB] 2021-05-15T13:46:13.4809245Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-eng all 1:4.00~git30-7274cfa-1 [1598 kB] 2021-05-15T13:46:13.5070054Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-osd all 1:4.00~git30-7274cfa-1 [2990 kB] 2021-05-15T13:46:13.5521134Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr amd64 4.1.1-2build2 [262 kB] 2021-05-15T13:46:13.9539651Z Fetched 10.4 MB in 0s (55.4 MB/s) 2021-05-15T13:46:13.9873563Z Selecting previously unselected package libarchive-dev:amd64. 2021-05-15T13:46:13.9947630Z (Reading database ... 2021-05-15T13:46:13.9948346Z (Reading database ... 5% 2021-05-15T13:46:13.9949014Z (Reading database ... 10% 2021-05-15T13:46:13.9949661Z (Reading database ... 15% 2021-05-15T13:46:13.9950297Z (Reading database ... 20% 2021-05-15T13:46:13.9950955Z (Reading database ... 25% 2021-05-15T13:46:13.9951591Z (Reading database ... 30% 2021-05-15T13:46:13.9952210Z (Reading database ... 35% 2021-05-15T13:46:13.9952844Z (Reading database ... 40% 2021-05-15T13:46:13.9953483Z (Reading database ... 45% 2021-05-15T13:46:13.9954103Z (Reading database ... 50% 2021-05-15T13:46:13.9991223Z (Reading database ... 55% 2021-05-15T13:46:14.0035803Z (Reading database ... 60% 2021-05-15T13:46:14.0060402Z (Reading database ... 65% 2021-05-15T13:46:14.0180011Z (Reading database ... 70% 2021-05-15T13:46:14.0294492Z (Reading database ... 75% 2021-05-15T13:46:14.0323391Z (Reading database ... 80% 2021-05-15T13:46:14.0865276Z (Reading database ... 85% 2021-05-15T13:46:14.1041204Z (Reading database ... 90% 2021-05-15T13:46:14.1122781Z (Reading database ... 95% 2021-05-15T13:46:14.1123377Z (Reading database ... 100% 2021-05-15T13:46:14.1124180Z (Reading database ... 268620 files and directories currently installed.) 2021-05-15T13:46:14.1254793Z Preparing to unpack .../0-libarchive-dev_3.4.0-2ubuntu1_amd64.deb ... 2021-05-15T13:46:14.1268519Z Unpacking libarchive-dev:amd64 (3.4.0-2ubuntu1) ... 2021-05-15T13:46:14.2059387Z Selecting previously unselected package liblept5:amd64. 2021-05-15T13:46:14.2302933Z Preparing to unpack .../1-liblept5_1.79.0-1_amd64.deb ... 2021-05-15T13:46:14.2343132Z Unpacking liblept5:amd64 (1.79.0-1) ... 2021-05-15T13:46:14.3569180Z Selecting previously unselected package libleptonica-dev:amd64. 2021-05-15T13:46:14.3857352Z Preparing to unpack .../2-libleptonica-dev_1.79.0-1_amd64.deb ... 2021-05-15T13:46:14.3909041Z Unpacking libleptonica-dev:amd64 (1.79.0-1) ... 2021-05-15T13:46:14.5498225Z Selecting previously unselected package libtesseract4:amd64. 2021-05-15T13:46:14.5733711Z Preparing to unpack .../3-libtesseract4_4.1.1-2build2_amd64.deb ... 2021-05-15T13:46:14.5793197Z Unpacking libtesseract4:amd64 (4.1.1-2build2) ... 2021-05-15T13:46:14.7184781Z Selecting previously unselected package libtesseract-dev:amd64. 2021-05-15T13:46:14.7473852Z Preparing to unpack .../4-libtesseract-dev_4.1.1-2build2_amd64.deb ... 2021-05-15T13:46:14.7501858Z Unpacking libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-05-15T13:46:14.9218717Z Selecting previously unselected package tesseract-ocr-eng. 2021-05-15T13:46:14.9455441Z Preparing to unpack .../5-tesseract-ocr-eng_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-05-15T13:46:14.9491140Z Unpacking tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-05-15T13:46:15.1179241Z Selecting previously unselected package tesseract-ocr-osd. 2021-05-15T13:46:15.1436050Z Preparing to unpack .../6-tesseract-ocr-osd_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-05-15T13:46:15.1464743Z Unpacking tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-05-15T13:46:15.5119550Z Selecting previously unselected package tesseract-ocr. 2021-05-15T13:46:15.5409327Z Preparing to unpack .../7-tesseract-ocr_4.1.1-2build2_amd64.deb ... 2021-05-15T13:46:15.5424838Z Unpacking tesseract-ocr (4.1.1-2build2) ... 2021-05-15T13:46:15.6278515Z Setting up tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-05-15T13:46:15.6423673Z Setting up liblept5:amd64 (1.79.0-1) ... 2021-05-15T13:46:15.6540655Z Setting up libleptonica-dev:amd64 (1.79.0-1) ... 2021-05-15T13:46:15.6663967Z Setting up libtesseract4:amd64 (4.1.1-2build2) ... 2021-05-15T13:46:15.6732131Z Setting up libarchive-dev:amd64 (3.4.0-2ubuntu1) ... 2021-05-15T13:46:15.6790124Z Setting up tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-05-15T13:46:15.6848413Z Setting up libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-05-15T13:46:15.6904431Z Setting up tesseract-ocr (4.1.1-2build2) ... 2021-05-15T13:46:15.7009051Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:46:18.4768187Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:46:20.4305203Z Reading package lists... 2021-05-15T13:46:20.5867172Z Building dependency tree... 2021-05-15T13:46:20.5885050Z Reading state information... 2021-05-15T13:46:20.7963786Z wget is already the newest version (1.20.3-1ubuntu1). 2021-05-15T13:46:20.7965281Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:46:20.8562261Z Reading package lists... 2021-05-15T13:46:21.0119646Z Building dependency tree... 2021-05-15T13:46:21.0137725Z Reading state information... 2021-05-15T13:46:21.1597990Z The following additional packages will be installed: 2021-05-15T13:46:21.1602563Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-05-15T13:46:21.1603788Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev 2021-05-15T13:46:21.1607633Z Suggested packages: 2021-05-15T13:46:21.1608514Z doc-base krb5-doc krb5-user libnorm-doc 2021-05-15T13:46:21.2101042Z The following NEW packages will be installed: 2021-05-15T13:46:21.2103909Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-05-15T13:46:21.2109011Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev libzmq3-dev 2021-05-15T13:46:21.2309506Z 0 upgraded, 10 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:46:21.2310499Z Need to get 1459 kB of archives. 2021-05-15T13:46:21.2311204Z After this operation, 7754 kB of additional disk space will be used. 2021-05-15T13:46:21.2313412Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgssrpc4 amd64 1.17-6ubuntu4.1 [55.4 kB] 2021-05-15T13:46:21.2336841Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkdb5-9 amd64 1.17-6ubuntu4.1 [37.3 kB] 2021-05-15T13:46:21.2346358Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5srv-mit11 amd64 1.17-6ubuntu4.1 [49.5 kB] 2021-05-15T13:46:21.2360138Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5clnt-mit11 amd64 1.17-6ubuntu4.1 [37.6 kB] 2021-05-15T13:46:21.2367631Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 comerr-dev amd64 2.1-1.45.5-2ubuntu1 [39.9 kB] 2021-05-15T13:46:21.2380576Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 krb5-multidev amd64 1.17-6ubuntu4.1 [120 kB] 2021-05-15T13:46:21.2414896Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnorm-dev amd64 1.5.8+dfsg2-2build1 [463 kB] 2021-05-15T13:46:21.2499495Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpgm-dev amd64 5.2.122~dfsg-3ubuntu1 [189 kB] 2021-05-15T13:46:21.2519053Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkrb5-dev amd64 1.17-6ubuntu4.1 [11.7 kB] 2021-05-15T13:46:21.2524460Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzmq3-dev amd64 4.3.2-2ubuntu1 [455 kB] 2021-05-15T13:46:21.6544272Z Fetched 1459 kB in 0s (35.5 MB/s) 2021-05-15T13:46:21.6850258Z Selecting previously unselected package libgssrpc4:amd64. 2021-05-15T13:46:21.6927758Z (Reading database ... 2021-05-15T13:46:21.6928393Z (Reading database ... 5% 2021-05-15T13:46:21.6928970Z (Reading database ... 10% 2021-05-15T13:46:21.6929524Z (Reading database ... 15% 2021-05-15T13:46:21.6930057Z (Reading database ... 20% 2021-05-15T13:46:21.6930604Z (Reading database ... 25% 2021-05-15T13:46:21.6931157Z (Reading database ... 30% 2021-05-15T13:46:21.6931700Z (Reading database ... 35% 2021-05-15T13:46:21.6932250Z (Reading database ... 40% 2021-05-15T13:46:21.6932773Z (Reading database ... 45% 2021-05-15T13:46:21.6933316Z (Reading database ... 50% 2021-05-15T13:46:21.6961521Z (Reading database ... 55% 2021-05-15T13:46:21.7008348Z (Reading database ... 60% 2021-05-15T13:46:21.7040268Z (Reading database ... 65% 2021-05-15T13:46:21.7168125Z (Reading database ... 70% 2021-05-15T13:46:21.7286898Z (Reading database ... 75% 2021-05-15T13:46:21.7310945Z (Reading database ... 80% 2021-05-15T13:46:21.7692678Z (Reading database ... 85% 2021-05-15T13:46:21.7993302Z (Reading database ... 90% 2021-05-15T13:46:21.8073401Z (Reading database ... 95% 2021-05-15T13:46:21.8074006Z (Reading database ... 100% 2021-05-15T13:46:21.8074787Z (Reading database ... 268845 files and directories currently installed.) 2021-05-15T13:46:21.8201583Z Preparing to unpack .../0-libgssrpc4_1.17-6ubuntu4.1_amd64.deb ... 2021-05-15T13:46:21.8279640Z Unpacking libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T13:46:21.8778322Z Selecting previously unselected package libkdb5-9:amd64. 2021-05-15T13:46:21.8987953Z Preparing to unpack .../1-libkdb5-9_1.17-6ubuntu4.1_amd64.deb ... 2021-05-15T13:46:21.9002809Z Unpacking libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T13:46:21.9378193Z Selecting previously unselected package libkadm5srv-mit11:amd64. 2021-05-15T13:46:21.9656816Z Preparing to unpack .../2-libkadm5srv-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-05-15T13:46:21.9673138Z Unpacking libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T13:46:22.0139333Z Selecting previously unselected package libkadm5clnt-mit11:amd64. 2021-05-15T13:46:22.0357050Z Preparing to unpack .../3-libkadm5clnt-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-05-15T13:46:22.0379899Z Unpacking libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T13:46:22.0818348Z Selecting previously unselected package comerr-dev:amd64. 2021-05-15T13:46:22.1034247Z Preparing to unpack .../4-comerr-dev_2.1-1.45.5-2ubuntu1_amd64.deb ... 2021-05-15T13:46:22.1102321Z Unpacking comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-05-15T13:46:22.1545687Z Selecting previously unselected package krb5-multidev:amd64. 2021-05-15T13:46:22.1833004Z Preparing to unpack .../5-krb5-multidev_1.17-6ubuntu4.1_amd64.deb ... 2021-05-15T13:46:22.1862099Z Unpacking krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T13:46:22.2318222Z Selecting previously unselected package libnorm-dev:amd64. 2021-05-15T13:46:22.2605456Z Preparing to unpack .../6-libnorm-dev_1.5.8+dfsg2-2build1_amd64.deb ... 2021-05-15T13:46:22.2660498Z Unpacking libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-05-15T13:46:22.3460175Z Selecting previously unselected package libpgm-dev:amd64. 2021-05-15T13:46:22.3704576Z Preparing to unpack .../7-libpgm-dev_5.2.122~dfsg-3ubuntu1_amd64.deb ... 2021-05-15T13:46:22.3730849Z Unpacking libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-05-15T13:46:22.4181953Z Selecting previously unselected package libkrb5-dev:amd64. 2021-05-15T13:46:22.4467603Z Preparing to unpack .../8-libkrb5-dev_1.17-6ubuntu4.1_amd64.deb ... 2021-05-15T13:46:22.4477662Z Unpacking libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T13:46:22.4818854Z Selecting previously unselected package libzmq3-dev:amd64. 2021-05-15T13:46:22.5053260Z Preparing to unpack .../9-libzmq3-dev_4.3.2-2ubuntu1_amd64.deb ... 2021-05-15T13:46:22.5070680Z Unpacking libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-05-15T13:46:22.6192481Z Setting up libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-05-15T13:46:22.6291847Z Setting up libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T13:46:22.6322512Z Setting up libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-05-15T13:46:22.6358036Z Setting up comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-05-15T13:46:22.6473148Z Setting up libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T13:46:22.6514584Z Setting up libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T13:46:22.6534656Z Setting up libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T13:46:22.6561106Z Setting up krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T13:46:22.6586446Z Setting up libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-05-15T13:46:22.6613873Z Setting up libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-05-15T13:46:22.6662710Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:46:22.6858782Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:46:25.6441832Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-15T13:46:27.7001102Z Reading package lists... 2021-05-15T13:46:28.6065326Z E: Unable to locate package udunits 2021-05-15T13:46:28.6065960Z Building dependency tree... 2021-05-15T13:46:28.6067385Z Reading state information... 2021-05-15T13:46:28.6068285Z Reading package lists... 2021-05-15T13:46:28.6072816Z Building dependency tree... 2021-05-15T13:46:28.6073506Z Reading state information... 2021-05-15T13:46:28.6074281Z The following additional packages will be installed: 2021-05-15T13:46:28.6074938Z libwebpdemux2 2021-05-15T13:46:28.6075623Z The following NEW packages will be installed: 2021-05-15T13:46:28.6076863Z libwebp-dev libwebpdemux2 2021-05-15T13:46:28.6077994Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:46:28.6078690Z Need to get 277 kB of archives. 2021-05-15T13:46:28.6079470Z After this operation, 965 kB of additional disk space will be used. 2021-05-15T13:46:28.6080970Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwebpdemux2 amd64 0.6.1-2 [9472 B] 2021-05-15T13:46:28.6083068Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwebp-dev amd64 0.6.1-2 [267 kB] 2021-05-15T13:46:28.8576830Z Fetched 277 kB in 0s (10.1 MB/s) 2021-05-15T13:46:28.8933533Z Selecting previously unselected package libwebpdemux2:amd64. 2021-05-15T13:46:28.9010018Z (Reading database ... 2021-05-15T13:46:28.9010835Z (Reading database ... 5% 2021-05-15T13:46:28.9011506Z (Reading database ... 10% 2021-05-15T13:46:28.9012151Z (Reading database ... 15% 2021-05-15T13:46:28.9012970Z (Reading database ... 20% 2021-05-15T13:46:28.9013645Z (Reading database ... 25% 2021-05-15T13:46:28.9014262Z (Reading database ... 30% 2021-05-15T13:46:28.9014886Z (Reading database ... 35% 2021-05-15T13:46:28.9015515Z (Reading database ... 40% 2021-05-15T13:46:28.9016132Z (Reading database ... 45% 2021-05-15T13:46:28.9017075Z (Reading database ... 50% 2021-05-15T13:46:28.9049531Z (Reading database ... 55% 2021-05-15T13:46:28.9090903Z (Reading database ... 60% 2021-05-15T13:46:28.9120856Z (Reading database ... 65% 2021-05-15T13:46:28.9246148Z (Reading database ... 70% 2021-05-15T13:46:28.9364778Z (Reading database ... 75% 2021-05-15T13:46:28.9388802Z (Reading database ... 80% 2021-05-15T13:46:28.9792060Z (Reading database ... 85% 2021-05-15T13:46:29.0113590Z (Reading database ... 90% 2021-05-15T13:46:29.0194406Z (Reading database ... 95% 2021-05-15T13:46:29.0195000Z (Reading database ... 100% 2021-05-15T13:46:29.0195811Z (Reading database ... 269145 files and directories currently installed.) 2021-05-15T13:46:29.0327286Z Preparing to unpack .../libwebpdemux2_0.6.1-2_amd64.deb ... 2021-05-15T13:46:29.0380625Z Unpacking libwebpdemux2:amd64 (0.6.1-2) ... 2021-05-15T13:46:29.0700666Z Selecting previously unselected package libwebp-dev:amd64. 2021-05-15T13:46:29.0914992Z Preparing to unpack .../libwebp-dev_0.6.1-2_amd64.deb ... 2021-05-15T13:46:29.0945347Z Unpacking libwebp-dev:amd64 (0.6.1-2) ... 2021-05-15T13:46:29.1892894Z Setting up libwebpdemux2:amd64 (0.6.1-2) ... 2021-05-15T13:46:29.1973585Z Setting up libwebp-dev:amd64 (0.6.1-2) ... 2021-05-15T13:46:29.2067853Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:46:31.1090891Z Reading package lists... 2021-05-15T13:46:31.2719786Z Building dependency tree... 2021-05-15T13:46:31.2738520Z Reading state information... 2021-05-15T13:46:31.4254926Z The following additional packages will be installed: 2021-05-15T13:46:31.4258162Z gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-05-15T13:46:31.4259713Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-05-15T13:46:31.4261227Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-05-15T13:46:31.4264255Z Suggested packages: 2021-05-15T13:46:31.4265313Z cargo-doc gdb-doc gdbserver rust-doc rust-src 2021-05-15T13:46:31.4266112Z Recommended packages: 2021-05-15T13:46:31.4266708Z cargo 2021-05-15T13:46:31.4780836Z The following NEW packages will be installed: 2021-05-15T13:46:31.4787560Z cargo gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-05-15T13:46:31.4789196Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-05-15T13:46:31.4791017Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-05-15T13:46:31.5026912Z 0 upgraded, 13 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:46:31.5027901Z Need to get 108 MB of archives. 2021-05-15T13:46:31.5028590Z After this operation, 501 MB of additional disk space will be used. 2021-05-15T13:46:31.5030803Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libbabeltrace1 amd64 1.5.8-1build1 [156 kB] 2021-05-15T13:46:31.5091541Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libipt2 amd64 2.0.1-1 [42.8 kB] 2021-05-15T13:46:31.5100212Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight-common all 3.1.8-1.2build5 [50.7 kB] 2021-05-15T13:46:31.5107119Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libboost-regex1.71.0 amd64 1.71.0-6ubuntu6 [471 kB] 2021-05-15T13:46:31.5175873Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight4v5 amd64 3.1.8-1.2build5 [232 kB] 2021-05-15T13:46:31.5194113Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxxhash0 amd64 0.7.3-1 [15.3 kB] 2021-05-15T13:46:31.5198639Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-1.47 amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [59.6 MB] 2021-05-15T13:46:31.6561928Z Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal/main amd64 gdb amd64 10.2-0ubuntu1~20.04~1 [3282 kB] 2021-05-15T13:46:32.8814755Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-dev amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [28.5 MB] 2021-05-15T13:46:33.1821534Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rustc amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [1921 kB] 2021-05-15T13:46:33.2016314Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 cargo amd64 0.47.0-1~exp1ubuntu1~20.04.1 [3147 kB] 2021-05-15T13:46:33.2329591Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libc6-dbg amd64 2.31-0ubuntu9.2 [10.5 MB] 2021-05-15T13:46:33.4571053Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rust-gdb all 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [27.5 kB] 2021-05-15T13:46:33.8631857Z Fetched 108 MB in 2s (54.7 MB/s) 2021-05-15T13:46:33.9024050Z Selecting previously unselected package libbabeltrace1:amd64. 2021-05-15T13:46:33.9102976Z (Reading database ... 2021-05-15T13:46:33.9103802Z (Reading database ... 5% 2021-05-15T13:46:33.9104466Z (Reading database ... 10% 2021-05-15T13:46:33.9105105Z (Reading database ... 15% 2021-05-15T13:46:33.9105729Z (Reading database ... 20% 2021-05-15T13:46:33.9106361Z (Reading database ... 25% 2021-05-15T13:46:33.9106988Z (Reading database ... 30% 2021-05-15T13:46:33.9107602Z (Reading database ... 35% 2021-05-15T13:46:33.9108229Z (Reading database ... 40% 2021-05-15T13:46:33.9108840Z (Reading database ... 45% 2021-05-15T13:46:33.9109474Z (Reading database ... 50% 2021-05-15T13:46:33.9131960Z (Reading database ... 55% 2021-05-15T13:46:33.9175293Z (Reading database ... 60% 2021-05-15T13:46:33.9205351Z (Reading database ... 65% 2021-05-15T13:46:33.9327028Z (Reading database ... 70% 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libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-15T13:46:45.3659167Z Setting up libsource-highlight-common (3.1.8-1.2build5) ... 2021-05-15T13:46:45.3755413Z Setting up libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-05-15T13:46:45.3828666Z Setting up libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-15T13:46:45.3941861Z Setting up libipt2 (2.0.1-1) ... 2021-05-15T13:46:45.4058608Z Setting up libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-05-15T13:46:45.4158634Z Setting up libbabeltrace1:amd64 (1.5.8-1build1) ... 2021-05-15T13:46:45.4252709Z Setting up rustc (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-15T13:46:45.4345967Z Setting up libxxhash0:amd64 (0.7.3-1) ... 2021-05-15T13:46:45.4413275Z Setting up libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-05-15T13:46:45.4551343Z Setting up cargo (0.47.0-1~exp1ubuntu1~20.04.1) ... 2021-05-15T13:46:45.4609856Z Setting up gdb (10.2-0ubuntu1~20.04~1) ... 2021-05-15T13:46:45.4744912Z Setting up rust-gdb (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-15T13:46:45.4900689Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:46:45.5181764Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:46:48.5396411Z Reading package lists... 2021-05-15T13:46:48.6849310Z Building dependency tree... 2021-05-15T13:46:48.6868466Z Reading state information... 2021-05-15T13:46:48.8379886Z The following additional packages will be installed: 2021-05-15T13:46:48.8382273Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-05-15T13:46:48.8385030Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-05-15T13:46:48.8386486Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-05-15T13:46:48.8387868Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-05-15T13:46:48.8389277Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-05-15T13:46:48.8391029Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-05-15T13:46:48.8392269Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-05-15T13:46:48.8393712Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-05-15T13:46:48.8395157Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-05-15T13:46:48.8396700Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-05-15T13:46:48.8398160Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-05-15T13:46:48.8399595Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-05-15T13:46:48.8401122Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-05-15T13:46:48.8402785Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-05-15T13:46:48.8404396Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-05-15T13:46:48.8405914Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-05-15T13:46:48.8407373Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-05-15T13:46:48.8408841Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-05-15T13:46:48.8410374Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-05-15T13:46:48.8411630Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-05-15T13:46:48.8412831Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-05-15T13:46:48.8414125Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-05-15T13:46:48.8415345Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-05-15T13:46:48.8416490Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-05-15T13:46:48.8417875Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-05-15T13:46:48.8419296Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-05-15T13:46:48.8420720Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-05-15T13:46:48.8422163Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-05-15T13:46:48.8423628Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-05-15T13:46:48.8424999Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-05-15T13:46:48.8426290Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-05-15T13:46:48.8427613Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-05-15T13:46:48.8428978Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-05-15T13:46:48.8430528Z python3-cycler python3-dateutil python3-decorator python3-future 2021-05-15T13:46:48.8431841Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-05-15T13:46:48.8433157Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-05-15T13:46:48.8434391Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-05-15T13:46:48.8435576Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-05-15T13:46:48.8436734Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-05-15T13:46:48.8437979Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-05-15T13:46:48.8439258Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-05-15T13:46:48.8440421Z python3-webencodings qdoc-qt5 qgis-common qgis-plugin-grass 2021-05-15T13:46:48.8441586Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-05-15T13:46:48.8442970Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-05-15T13:46:48.8444398Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-05-15T13:46:48.8445638Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-05-15T13:46:48.8446966Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-05-15T13:46:48.8448281Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-05-15T13:46:48.8449404Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-05-15T13:46:48.8450045Z Suggested packages: 2021-05-15T13:46:48.8450972Z avahi-autoipd blt-demo libgdal-grass grass-dev grass-gui e00compr avce00 2021-05-15T13:46:48.8452097Z gnuplot gpsbabel gpstrans netpbm python3-rpy2 python3-termcolor grass 2021-05-15T13:46:48.8453375Z grass-dev-doc gvfs exiv2 geotiff-bin libgeotiff-epsg libvisual-0.4-plugins 2021-05-15T13:46:48.8454665Z libhdf4-doc libhdf4-alt-dev hdf4-tools libjs-jquery-ui-docs avahi-autoipd 2021-05-15T13:46:48.8455755Z | zeroconf ogdi-bin pcscd libqscintilla2-doc qtwayland5 2021-05-15T13:46:48.8457039Z qt5-qmltooling-plugins pinentry-doc python-cycler-doc python-future-doc 2021-05-15T13:46:48.8458302Z python3-genshi python3-lxml-dbg python-lxml-doc dvipng gir1.2-gtk-3.0 2021-05-15T13:46:48.8459600Z inkscape ipython3 python-matplotlib-doc python3-cairocffi python3-gi-cairo 2021-05-15T13:46:48.8460779Z python3-gobject python3-nose python3-scipy python3-tornado 2021-05-15T13:46:48.8462003Z texlive-extra-utils texlive-latex-extra ttf-staypuft python-numpy-doc 2021-05-15T13:46:48.8463326Z python3-pytest python3-numpy-dbg owslib-doc python-pil-doc python3-pil-dbg 2021-05-15T13:46:48.8464661Z python3-pandas python3-ipykernel python-psycopg2-doc python-pyparsing-doc 2021-05-15T13:46:48.8465915Z python3-pyqt5-dbg otb-qgis saga tix python3-tk-dbg qt5-doc comgt wvdial 2021-05-15T13:46:48.8466819Z wpagui libengine-pkcs11-openssl 2021-05-15T13:46:48.9284631Z The following NEW packages will be installed: 2021-05-15T13:46:48.9287085Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-05-15T13:46:48.9288885Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-05-15T13:46:48.9290622Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-05-15T13:46:48.9292325Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-05-15T13:46:48.9294006Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-05-15T13:46:48.9295620Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-05-15T13:46:48.9297320Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-05-15T13:46:48.9299055Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-05-15T13:46:48.9300767Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-05-15T13:46:48.9302402Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-05-15T13:46:48.9304082Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-05-15T13:46:48.9305767Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-05-15T13:46:48.9308817Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-05-15T13:46:48.9313400Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-05-15T13:46:48.9315013Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-05-15T13:46:48.9316534Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-05-15T13:46:48.9317979Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-05-15T13:46:48.9319449Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-05-15T13:46:48.9321002Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-05-15T13:46:48.9322232Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-05-15T13:46:48.9323452Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-05-15T13:46:48.9324725Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-05-15T13:46:48.9325945Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-05-15T13:46:48.9327357Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-05-15T13:46:48.9328520Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-05-15T13:46:48.9329946Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-05-15T13:46:48.9331350Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-05-15T13:46:48.9332796Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-05-15T13:46:48.9334340Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-05-15T13:46:48.9335725Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-05-15T13:46:48.9337142Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-05-15T13:46:48.9338405Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-05-15T13:46:48.9339783Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-05-15T13:46:48.9341196Z python3-cycler python3-dateutil python3-decorator python3-future 2021-05-15T13:46:48.9342718Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-05-15T13:46:48.9344225Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-05-15T13:46:48.9345717Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-05-15T13:46:48.9346917Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-05-15T13:46:48.9348065Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-05-15T13:46:48.9349324Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-05-15T13:46:48.9350584Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-05-15T13:46:48.9351767Z python3-webencodings qdoc-qt5 qgis qgis-common qgis-plugin-grass 2021-05-15T13:46:48.9352943Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-05-15T13:46:48.9354327Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-05-15T13:46:48.9355766Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-05-15T13:46:48.9356994Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-05-15T13:46:48.9358207Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-05-15T13:46:48.9359517Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-05-15T13:46:48.9360635Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-05-15T13:46:48.9528159Z 0 upgraded, 214 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:46:48.9529045Z Need to get 183 MB of archives. 2021-05-15T13:46:48.9529736Z After this operation, 776 MB of additional disk space will be used. 2021-05-15T13:46:48.9531607Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdouble-conversion3 amd64 3.1.5-4ubuntu1 [37.9 kB] 2021-05-15T13:46:48.9553438Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5core5a amd64 5.12.8+dfsg-0ubuntu1 [2005 kB] 2021-05-15T13:46:49.0128950Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl-mesa0 amd64 20.2.6-0ubuntu0.20.04.1 [97.7 kB] 2021-05-15T13:46:49.0168863Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl1 amd64 1.3.2-1~ubuntu0.20.04.1 [31.9 kB] 2021-05-15T13:46:49.0181399Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libevdev2 amd64 1.9.0+dfsg-1ubuntu0.1 [31.6 kB] 2021-05-15T13:46:49.0234000Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmtdev1 amd64 1.1.5-1.1 [14.2 kB] 2021-05-15T13:46:49.0240391Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-common all 1.3-2ubuntu3 [45.3 kB] 2021-05-15T13:46:49.0256357Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom2 amd64 1.3-2ubuntu3 [20.0 kB] 2021-05-15T13:46:49.0263097Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput-bin amd64 1.15.5-1ubuntu0.2 [19.1 kB] 2021-05-15T13:46:49.0273329Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput10 amd64 1.15.5-1ubuntu0.2 [112 kB] 2021-05-15T13:46:49.0309493Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5dbus5 amd64 5.12.8+dfsg-0ubuntu1 [208 kB] 2021-05-15T13:46:49.0357031Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5network5 amd64 5.12.8+dfsg-0ubuntu1 [674 kB] 2021-05-15T13:46:49.0498295Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [10.8 kB] 2021-05-15T13:46:49.0507086Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-util1 amd64 0.4.0-0ubuntu3 [11.2 kB] 2021-05-15T13:46:49.0512020Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-image0 amd64 0.4.0-1build1 [12.3 kB] 2021-05-15T13:46:49.0517245Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-keysyms1 amd64 0.4.0-1build1 [8452 B] 2021-05-15T13:46:49.0525011Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-randr0 amd64 1.14-2 [16.3 kB] 2021-05-15T13:46:49.0532190Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-render-util0 amd64 0.3.9-1build1 [9912 B] 2021-05-15T13:46:49.0541268Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinerama0 amd64 1.14-2 [5260 B] 2021-05-15T13:46:49.0552107Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinput0 amd64 1.14-2 [29.3 kB] 2021-05-15T13:46:49.0570668Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xkb1 amd64 1.14-2 [29.6 kB] 2021-05-15T13:46:49.0585046Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxkbcommon-x11-0 amd64 0.10.0-1 [13.4 kB] 2021-05-15T13:46:49.0597632Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5gui5 amd64 5.12.8+dfsg-0ubuntu1 [2971 kB] 2021-05-15T13:46:49.1463568Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5widgets5 amd64 5.12.8+dfsg-0ubuntu1 [2293 kB] 2021-05-15T13:46:49.2052087Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5svg5 amd64 5.12.8-0ubuntu1 [131 kB] 2021-05-15T13:46:49.2089694Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liborc-0.4-0 amd64 1:0.4.31-1 [188 kB] 2021-05-15T13:46:49.2141846Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgstreamer-plugins-base1.0-0 amd64 1.16.2-4 [735 kB] 2021-05-15T13:46:49.2353670Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhyphen0 amd64 2.8.8-7 [27.0 kB] 2021-05-15T13:46:49.2366722Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5positioning5 amd64 5.12.8+dfsg-0ubuntu1 [197 kB] 2021-05-15T13:46:49.2433611Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5printsupport5 amd64 5.12.8+dfsg-0ubuntu1 [193 kB] 2021-05-15T13:46:49.2496890Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5qml5 amd64 5.12.8-0ubuntu1 [1438 kB] 2021-05-15T13:46:49.3043661Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quick5 amd64 5.12.8-0ubuntu1 [1335 kB] 2021-05-15T13:46:49.3449206Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sensors5 amd64 5.12.8-0ubuntu1 [114 kB] 2021-05-15T13:46:49.3483436Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webchannel5 amd64 5.12.8-0ubuntu1 [51.2 kB] 2021-05-15T13:46:49.3510599Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwoff1 amd64 1.0.2-1build2 [42.0 kB] 2021-05-15T13:46:49.3528367Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webkit5 amd64 5.212.0~alpha4-1ubuntu2 [12.1 MB] 2021-05-15T13:46:49.6833501Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-image-formats-plugins amd64 5.12.8-0ubuntu1 [43.4 kB] 2021-05-15T13:46:49.6841167Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers-common all 3.10.4+dfsg-1ubuntu2 [897 kB] 2021-05-15T13:46:49.6980907Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2 amd64 2.2.1-2build1 [307 kB] 2021-05-15T13:46:49.7072748Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2-plugins amd64 2.2.1-2build1 [191 kB] 2021-05-15T13:46:49.7114608Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5 amd64 5.12.8+dfsg-0ubuntu1 [121 kB] 2021-05-15T13:46:49.7142645Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5-sqlite amd64 5.12.8+dfsg-0ubuntu1 [47.5 kB] 2021-05-15T13:46:49.7159402Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-data all 3.0.4+dfsg-1build3 [186 kB] 2021-05-15T13:46:49.7202634Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarpack2 amd64 3.7.0-3 [92.8 kB] 2021-05-15T13:46:49.7227814Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsuperlu5 amd64 5.2.1+dfsg1-4 [159 kB] 2021-05-15T13:46:49.7262452Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarmadillo9 amd64 1:9.800.4+dfsg-1build1 [93.2 kB] 2021-05-15T13:46:49.7290114Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcfitsio8 amd64 3.470-3 [466 kB] 2021-05-15T13:46:49.7404824Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcharls2 amd64 2.0.0+dfsg-1build1 [74.1 kB] 2021-05-15T13:46:49.7439675Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdap25 amd64 3.20.5-1 [435 kB] 2021-05-15T13:46:49.7550044Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdapclient6v5 amd64 3.20.5-1 [92.2 kB] 2021-05-15T13:46:49.7569940Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libepsilon1 amd64 0.9.2+dfsg-4 [41.0 kB] 2021-05-15T13:46:49.7582423Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfreexl1 amd64 1.0.5-3 [33.4 kB] 2021-05-15T13:46:49.7588308Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfyba0 amd64 4.1.1-6build1 [113 kB] 2021-05-15T13:46:49.7618188Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-3.8.0 amd64 3.8.0-1build1 [535 kB] 2021-05-15T13:46:49.7765139Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-c1v5 amd64 3.8.0-1build1 [69.9 kB] 2021-05-15T13:46:49.7778773Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-data all 6.3.1-1 [7647 kB] 2021-05-15T13:46:49.9273848Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libproj15 amd64 6.3.1-1 [925 kB] 2021-05-15T13:46:49.9348842Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeotiff5 amd64 1.5.1-2 [53.1 kB] 2021-05-15T13:46:49.9356574Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf4-0-alt amd64 4.2.14-1ubuntu1 [268 kB] 2021-05-15T13:46:49.9378713Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libminizip1 amd64 1.1-8build1 [20.2 kB] 2021-05-15T13:46:49.9384655Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liburiparser1 amd64 0.9.3-2 [39.3 kB] 2021-05-15T13:46:49.9390435Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlbase1 amd64 1.3.0-8build1 [45.4 kB] 2021-05-15T13:46:49.9398174Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmldom1 amd64 1.3.0-8build1 [152 kB] 2021-05-15T13:46:49.9421793Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlengine1 amd64 1.3.0-8build1 [72.5 kB] 2021-05-15T13:46:49.9443167Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnetcdf15 amd64 1:4.7.3-1 [341 kB] 2021-05-15T13:46:49.9472861Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libogdi4.1 amd64 4.1.0+ds-1build1 [198 kB] 2021-05-15T13:46:49.9521043Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqhull7 amd64 2015.2-4 [152 kB] 2021-05-15T13:46:49.9534982Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialite7 amd64 4.3.0a-6build1 [1286 kB] 2021-05-15T13:46:49.9911296Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxerces-c3.2 amd64 3.2.2+debian-1build3 [878 kB] 2021-05-15T13:46:50.0151400Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgdal26 amd64 3.0.4+dfsg-1build3 [6156 kB] 2021-05-15T13:46:50.1411643Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5concurrent5 amd64 5.12.8+dfsg-0ubuntu1 [33.5 kB] 2021-05-15T13:46:50.1418154Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5keychain1 amd64 0.10.0-1build1 [48.4 kB] 2021-05-15T13:46:50.1427963Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5serialport5 amd64 5.12.8-0ubuntu1 [33.1 kB] 2021-05-15T13:46:50.1435768Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5xml5 amd64 5.12.8+dfsg-0ubuntu1 [105 kB] 2021-05-15T13:46:50.1466755Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialindex6 amd64 1.9.3-1build1 [266 kB] 2021-05-15T13:46:50.1534016Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzip5 amd64 1.5.1-0ubuntu1 [46.7 kB] 2021-05-15T13:46:50.1546658Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-core3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [5216 kB] 2021-05-15T13:46:50.2739247Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-native3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [44.5 kB] 2021-05-15T13:46:50.2748160Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-l10n all 2.11.2+dfsg-6 [41.3 kB] 2021-05-15T13:46:50.2763626Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-15 amd64 2.11.2+dfsg-6 [1238 kB] 2021-05-15T13:46:50.4483969Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quickwidgets5 amd64 5.12.8-0ubuntu1 [39.8 kB] 2021-05-15T13:46:50.4498692Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5opengl5 amd64 5.12.8+dfsg-0ubuntu1 [136 kB] 2021-05-15T13:46:50.4540230Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqwt-qt5-6 amd64 6.1.4-1.1build1 [427 kB] 2021-05-15T13:46:50.4661942Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-gui3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3195 kB] 2021-05-15T13:46:50.5039457Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers amd64 3.10.4+dfsg-1ubuntu2 [1940 kB] 2021-05-15T13:46:50.5691128Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-core7 amd64 0.7-4ubuntu7 [81.7 kB] 2021-05-15T13:46:50.5702359Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdaemon0 amd64 0.14-7 [13.9 kB] 2021-05-15T13:46:50.5708050Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 avahi-daemon amd64 0.7-4ubuntu7 [61.0 kB] 2021-05-15T13:46:50.5715664Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4 [572 kB] 2021-05-15T13:46:50.5866814Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 blt amd64 2.5.3+dfsg-4 [4944 B] 2021-05-15T13:46:50.5872486Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 fonts-lyx all 2.3.4.2-2 [154 kB] 2021-05-15T13:46:50.5891527Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgck-1-0 amd64 3.36.0-2build1 [75.5 kB] 2021-05-15T13:46:50.5902761Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-base-3-1 amd64 3.36.0-2build1 [193 kB] 2021-05-15T13:46:50.5957276Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-ui-3-1 amd64 3.36.0-2build1 [127 kB] 2021-05-15T13:46:50.5993165Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gcr amd64 3.36.0-2build1 [63.9 kB] 2021-05-15T13:46:50.6004695Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-numpy amd64 1:1.17.4-5ubuntu3 [2725 kB] 2021-05-15T13:46:50.6787417Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-gdal amd64 3.0.4+dfsg-1build3 [527 kB] 2021-05-15T13:46:50.6862729Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-bin amd64 3.0.4+dfsg-1build3 [256 kB] 2021-05-15T13:46:50.6912571Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-glib1 amd64 0.7-4ubuntu7 [7804 B] 2021-05-15T13:46:50.6920433Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmm-glib0 amd64 1.12.8-1 [185 kB] 2021-05-15T13:46:50.6948628Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 geoclue-2.0 amd64 2.5.6-0ubuntu1 [91.9 kB] 2021-05-15T13:46:50.6988845Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit-modules amd64 0.23.20-1ubuntu0.1 [231 kB] 2021-05-15T13:46:50.7070363Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit amd64 0.23.20-1ubuntu0.1 [93.8 kB] 2021-05-15T13:46:50.7086682Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 pinentry-gnome3 amd64 1.1.0-3build1 [38.6 kB] 2021-05-15T13:46:50.7092240Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring amd64 3.36.0-1ubuntu1 [613 kB] 2021-05-15T13:46:50.7207849Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring-pkcs11 amd64 3.36.0-1ubuntu1 [28.0 kB] 2021-05-15T13:46:50.7214047Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-doc all 7.8.2-1build3 [32.4 MB] 2021-05-15T13:46:51.4664764Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblaszip8 amd64 3.4.3-1build1 [125 kB] 2021-05-15T13:46:51.4682511Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-util9 amd64 2.0.1+ds-1build3 [68.5 kB] 2021-05-15T13:46:51.4694363Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-base9 amd64 2.0.1+ds-1build3 [1739 kB] 2021-05-15T13:46:51.4840999Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-core amd64 7.8.2-1build3 [5737 kB] 2021-05-15T13:46:51.5990554Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdparanoia0 amd64 3.10.2+debian-13 [46.7 kB] 2021-05-15T13:46:51.6001983Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvisual-0.4-0 amd64 0.4.0-17 [99.8 kB] 2021-05-15T13:46:51.6013281Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gstreamer1.0-plugins-base amd64 1.16.2-4 [619 kB] 2021-05-15T13:46:51.6064204Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 iio-sensor-proxy amd64 2.8-1ubuntu1 [35.8 kB] 2021-05-15T13:46:51.6073309Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libassimp5 amd64 5.0.1~ds0-1build1 [2775 kB] 2021-05-15T13:46:51.6285601Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libexiv2-27 amd64 0.27.2-8ubuntu2.2 [788 kB] 2021-05-15T13:46:51.6364002Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi0ldbl amd64 2.4.0-10build1 [155 kB] 2021-05-15T13:46:51.6378379Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi-bin amd64 2.4.0-10build1 [10.5 kB] 2021-05-15T13:46:51.6383926Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimagequant0 amd64 2.12.2-1.1 [31.4 kB] 2021-05-15T13:46:51.6390045Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] 2021-05-15T13:46:51.6408778Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-glib4 amd64 1.22.0-2 [101 kB] 2021-05-15T13:46:51.6419097Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-proxy amd64 1.22.0-2 [5908 B] 2021-05-15T13:46:51.6424117Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-genl-3-200 amd64 3.4.0-1 [11.1 kB] 2021-05-15T13:46:51.6426957Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-route-3-200 amd64 3.4.0-1 [149 kB] 2021-05-15T13:46:51.6438714Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnss-mdns amd64 0.14.1-1ubuntu1 [22.9 kB] 2021-05-15T13:46:51.6450246Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpam-gnome-keyring amd64 3.36.0-1ubuntu1 [23.3 kB] 2021-05-15T13:46:51.6459407Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpcsclite1 amd64 1.8.26-3 [22.0 kB] 2021-05-15T13:46:51.6469536Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-faux amd64 2.0.1+ds-1build3 [27.3 kB] 2021-05-15T13:46:51.6487176Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-icebridge amd64 2.0.1+ds-1build3 [42.8 kB] 2021-05-15T13:46:51.6513605Z Get:131 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-pgpointcloud amd64 2.0.1+ds-1build3 [75.3 kB] 2021-05-15T13:46:51.6534820Z Get:132 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-python amd64 2.0.1+ds-1build3 [136 kB] 2021-05-15T13:46:51.6569386Z Get:133 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsqlite3-mod-spatialite amd64 4.3.0a-6build1 [1265 kB] 2021-05-15T13:46:51.6855387Z Get:134 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-sqlite amd64 2.0.1+ds-1build3 [89.5 kB] 2021-05-15T13:46:51.6881194Z Get:135 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugins amd64 2.0.1+ds-1build3 [12.9 kB] 2021-05-15T13:46:51.6891694Z Get:136 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dcore5 amd64 5.12.8+dfsg-0ubuntu1 [137 kB] 2021-05-15T13:46:51.6938621Z Get:137 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53drender5 amd64 5.12.8+dfsg-0ubuntu1 [689 kB] 2021-05-15T13:46:51.7094437Z Get:138 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53danimation5 amd64 5.12.8+dfsg-0ubuntu1 [159 kB] 2021-05-15T13:46:51.7135515Z Get:139 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dinput5 amd64 5.12.8+dfsg-0ubuntu1 [125 kB] 2021-05-15T13:46:51.7162097Z Get:140 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dlogic5 amd64 5.12.8+dfsg-0ubuntu1 [25.9 kB] 2021-05-15T13:46:51.7170473Z Get:141 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dextras5 amd64 5.12.8+dfsg-0ubuntu1 [157 kB] 2021-05-15T13:46:51.7206240Z Get:142 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-assimpsceneimport-plugin amd64 5.12.8+dfsg-0ubuntu1 [45.2 kB] 2021-05-15T13:46:51.7218546Z Get:143 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-defaultgeometryloader-plugin amd64 5.12.8+dfsg-0ubuntu1 [33.3 kB] 2021-05-15T13:46:51.7230437Z Get:144 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-gltfsceneio-plugin amd64 5.12.8+dfsg-0ubuntu1 [110 kB] 2021-05-15T13:46:51.7255199Z Get:145 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dquickscene2d5 amd64 5.12.8+dfsg-0ubuntu1 [38.4 kB] 2021-05-15T13:46:51.7264575Z Get:146 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-scene2d-plugin amd64 5.12.8+dfsg-0ubuntu1 [17.1 kB] 2021-05-15T13:46:51.7277260Z Get:147 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-3d3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [224 kB] 2021-05-15T13:46:51.7338173Z Get:148 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-analysis3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [927 kB] 2021-05-15T13:46:51.7542946Z Get:149 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-app3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3060 kB] 2021-05-15T13:46:51.8425589Z Get:150 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtchooser amd64 66-2build1 [24.7 kB] 2021-05-15T13:46:51.8432554Z Get:151 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qdoc-qt5 amd64 5.12.8-0ubuntu1 [507 kB] 2021-05-15T13:46:51.8565662Z Get:152 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5help5 amd64 5.12.8-0ubuntu1 [134 kB] 2021-05-15T13:46:51.8583111Z Get:153 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qhelpgenerator-qt5 amd64 5.12.8-0ubuntu1 [64.3 kB] 2021-05-15T13:46:51.8591677Z Get:154 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-assistant amd64 5.12.8-0ubuntu1 [369 kB] 2021-05-15T13:46:51.8663056Z Get:155 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtattributionsscanner-qt5 amd64 5.12.8-0ubuntu1 [26.0 kB] 2021-05-15T13:46:51.8667706Z Get:156 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designer5 amd64 5.12.8-0ubuntu1 [2778 kB] 2021-05-15T13:46:51.9337840Z Get:157 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designercomponents5 amd64 5.12.8-0ubuntu1 [718 kB] 2021-05-15T13:46:51.9478699Z Get:158 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttools5-dev-tools amd64 5.12.8-0ubuntu1 [1031 kB] 2021-05-15T13:46:51.9708363Z Get:159 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-customwidgets amd64 3.10.4+dfsg-1ubuntu2 [3397 kB] 2021-05-15T13:46:52.0603448Z Get:160 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-server3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [311 kB] 2021-05-15T13:46:52.0662686Z Get:161 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgisgrass7-3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [228 kB] 2021-05-15T13:46:52.0704097Z Get:162 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgispython3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [43.1 kB] 2021-05-15T13:46:52.0710728Z Get:163 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-glib5 amd64 1.24.8-1 [529 kB] 2021-05-15T13:46:52.0826371Z Get:164 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-proxy amd64 1.24.8-1 [5856 B] 2021-05-15T13:46:52.0834220Z Get:165 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5test5 amd64 5.12.8+dfsg-0ubuntu1 [131 kB] 2021-05-15T13:46:52.0849214Z Get:166 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-bin amd64 1.3-2ubuntu3 [5484 B] 2021-05-15T13:46:52.0850976Z Get:167 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 modemmanager amd64 1.12.8-1 [755 kB] 2021-05-15T13:46:52.0910567Z Get:168 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 ttf-bitstream-vera all 1.10-8 [352 kB] 2021-05-15T13:46:52.0948072Z Get:169 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python-matplotlib-data all 3.1.2-1ubuntu4 [3788 kB] 2021-05-15T13:46:52.3928033Z Get:170 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-soupsieve all 1.9.5+dfsg-1 [29.1 kB] 2021-05-15T13:46:52.3939694Z Get:171 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-bs4 all 4.8.2-1 [83.0 kB] 2021-05-15T13:46:52.3951149Z Get:172 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-cycler all 0.10.0-3 [8132 B] 2021-05-15T13:46:52.3959085Z Get:173 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-dateutil all 2.7.3-3ubuntu1 [63.3 kB] 2021-05-15T13:46:52.3967977Z Get:174 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-decorator all 4.4.2-0ubuntu1 [10.3 kB] 2021-05-15T13:46:52.3977121Z Get:175 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-future all 0.18.2-2 [336 kB] 2021-05-15T13:46:52.4007178Z Get:176 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-webencodings all 0.5.1-1ubuntu1 [11.0 kB] 2021-05-15T13:46:52.4014763Z Get:177 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-html5lib all 1.0.1-2 [84.3 kB] 2021-05-15T13:46:52.4026557Z Get:178 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-ipython-genutils all 0.2.0-1ubuntu1 [21.1 kB] 2021-05-15T13:46:52.4035093Z Get:179 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-traitlets all 4.3.3-3 [59.9 kB] 2021-05-15T13:46:52.4044196Z Get:180 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-jupyter-core all 4.6.3-3 [41.2 kB] 2021-05-15T13:46:52.4054272Z Get:181 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-kiwisolver amd64 1.0.1-3build1 [61.3 kB] 2021-05-15T13:46:52.4061458Z Get:182 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-lxml amd64 4.5.0-1ubuntu0.3 [1382 kB] 2021-05-15T13:46:52.4408740Z Get:183 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-pyparsing all 2.4.6-1 [61.3 kB] 2021-05-15T13:46:52.4418136Z Get:184 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-matplotlib amd64 3.1.2-1ubuntu4 [4459 kB] 2021-05-15T13:46:52.5355827Z Get:185 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-nbformat all 5.0.4-1 [29.8 kB] 2021-05-15T13:46:52.5364823Z Get:186 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-olefile all 0.46-2 [33.7 kB] 2021-05-15T13:46:52.5372583Z Get:187 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyproj amd64 2.5.0+ds-1 [297 kB] 2021-05-15T13:46:52.5435581Z Get:188 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-tz all 2019.3-1 [24.4 kB] 2021-05-15T13:46:52.5445707Z Get:189 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-owslib all 0.19.1-1 [115 kB] 2021-05-15T13:46:52.5472619Z Get:190 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-pil amd64 7.0.0-4ubuntu0.3 [363 kB] 2021-05-15T13:46:52.5553277Z Get:191 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-retrying all 1.3.3-4 [8160 B] 2021-05-15T13:46:52.5558344Z Get:192 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-plotly all 4.4.1+dfsg-1 [1960 kB] 2021-05-15T13:46:52.5998862Z Get:193 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-psycopg2 amd64 2.8.4-2 [112 kB] 2021-05-15T13:46:52.6010148Z Get:194 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-sip amd64 4.19.21+dfsg-1build1 [87.9 kB] 2021-05-15T13:46:52.6017441Z Get:195 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5 amd64 5.14.1+dfsg-3build1 [2318 kB] 2021-05-15T13:46:52.6581650Z Get:196 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qsci amd64 2.11.2+dfsg-6 [230 kB] 2021-05-15T13:46:52.6598667Z Get:197 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsql amd64 5.14.1+dfsg-3build1 [87.5 kB] 2021-05-15T13:46:52.6605930Z Get:198 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsvg amd64 5.14.1+dfsg-3build1 [26.9 kB] 2021-05-15T13:46:52.6612178Z Get:199 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtwebkit amd64 5.14.1+dfsg-3build1 [103 kB] 2021-05-15T13:46:52.6621688Z Get:200 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis-common all 3.10.4+dfsg-1ubuntu2 [2390 kB] 2021-05-15T13:46:52.7161545Z Get:201 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis amd64 3.10.4+dfsg-1ubuntu2 [7772 kB] 2021-05-15T13:46:52.9229629Z Get:202 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-tk amd64 3.8.5-1~20.04.1 [103 kB] 2021-05-15T13:46:52.9290578Z Get:203 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-leaflet all 1.6.0~dfsg-1 [313 kB] 2021-05-15T13:46:52.9387471Z Get:204 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-common all 3.10.4+dfsg-1ubuntu2 [16.7 MB] 2021-05-15T13:46:53.0765423Z Get:205 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis amd64 3.10.4+dfsg-1ubuntu2 [4788 kB] 2021-05-15T13:46:53.1110781Z Get:206 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass-common all 3.10.4+dfsg-1ubuntu2 [463 kB] 2021-05-15T13:46:53.1145262Z Get:207 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-provider-grass amd64 3.10.4+dfsg-1ubuntu2 [92.3 kB] 2021-05-15T13:46:53.1153028Z Get:208 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass amd64 3.10.4+dfsg-1ubuntu2 [601 kB] 2021-05-15T13:46:53.1198061Z Get:209 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-gtk-platformtheme amd64 5.12.8+dfsg-0ubuntu1 [124 kB] 2021-05-15T13:46:53.1207787Z Get:210 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttranslations5-l10n all 5.12.8-0ubuntu1 [1486 kB] 2021-05-15T13:46:53.1327044Z Get:211 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 wpasupplicant amd64 2:2.9-1ubuntu4.3 [1183 kB] 2021-05-15T13:46:53.1436348Z Get:212 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-bin amd64 6.3.1-1 [88.8 kB] 2021-05-15T13:46:53.1443925Z Get:213 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch-data all 20191128-3 [32.3 kB] 2021-05-15T13:46:53.1448059Z Get:214 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch amd64 2.5.2+repack0-2ubuntu3 [53.1 kB] 2021-05-15T13:46:54.1322982Z Fetched 183 MB in 4s (43.5 MB/s) 2021-05-15T13:46:54.1694137Z Selecting previously unselected package libdouble-conversion3:amd64. 2021-05-15T13:46:54.1771481Z (Reading database ... 2021-05-15T13:46:54.1771980Z (Reading database ... 5% 2021-05-15T13:46:54.1772382Z (Reading database ... 10% 2021-05-15T13:46:54.1772897Z (Reading database ... 15% 2021-05-15T13:46:54.1773358Z (Reading database ... 20% 2021-05-15T13:46:54.1773801Z (Reading database ... 25% 2021-05-15T13:46:54.1774252Z (Reading database ... 30% 2021-05-15T13:46:54.1774695Z (Reading database ... 35% 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(2.5.2+repack0-2ubuntu3) ... 2021-05-15T13:47:28.6024462Z Setting up libarmadillo9 (1:9.800.4+dfsg-1build1) ... 2021-05-15T13:47:28.6077266Z Setting up p11-kit (0.23.20-1ubuntu0.1) ... 2021-05-15T13:47:28.6116076Z Setting up libqt5sensors5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T13:47:28.6146005Z Setting up libgck-1-0:amd64 (3.36.0-2build1) ... 2021-05-15T13:47:28.6188772Z Setting up python3-future (0.18.2-2) ... 2021-05-15T13:47:28.6261493Z update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode 2021-05-15T13:47:28.6318014Z update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode 2021-05-15T13:47:28.9535499Z Setting up qgis-plugin-grass-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:47:29.0949275Z Setting up libdaemon0:amd64 (0.14-7) ... 2021-05-15T13:47:29.1012168Z Setting up libqt5test5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:29.1072160Z Setting up libavahi-core7:amd64 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2021-05-15T13:47:29.9037344Z Setting up libkmldom1:amd64 (1.3.0-8build1) ... 2021-05-15T13:47:29.9113802Z Setting up libspatialite7:amd64 (4.3.0a-6build1) ... 2021-05-15T13:47:29.9220741Z Setting up libgcr-ui-3-1:amd64 (3.36.0-2build1) ... 2021-05-15T13:47:29.9294595Z Setting up python3-matplotlib (3.1.2-1ubuntu4) ... 2021-05-15T13:47:30.8409148Z Setting up libkmlengine1:amd64 (1.3.0-8build1) ... 2021-05-15T13:47:30.8516727Z Setting up libqt5keychain1:amd64 (0.10.0-1build1) ... 2021-05-15T13:47:30.8612802Z Setting up libsqlite3-mod-spatialite:amd64 (4.3.0a-6build1) ... 2021-05-15T13:47:30.8716870Z Setting up qdoc-qt5 (5.12.8-0ubuntu1) ... 2021-05-15T13:47:30.8779283Z Setting up libqt5positioning5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:30.8843625Z Setting up proj-bin (6.3.1-1) ... 2021-05-15T13:47:30.8910841Z Setting up libqca-qt5-2-plugins:amd64 (2.2.1-2build1) ... 2021-05-15T13:47:30.8987372Z Setting up libgstreamer-plugins-base1.0-0:amd64 (1.16.2-4) ... 2021-05-15T13:47:30.9062826Z Setting up geoclue-2.0 (2.5.6-0ubuntu1) ... 2021-05-15T13:47:31.3681227Z geoclue.service is a disabled or a static unit, not starting it. 2021-05-15T13:47:31.3709187Z Setting up libqt5serialport5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T13:47:31.3788603Z Setting up python3-nbformat (5.0.4-1) ... 2021-05-15T13:47:31.5451933Z Setting up libmbim-proxy (1.22.0-2) ... 2021-05-15T13:47:31.5524534Z Setting up python3-pyproj (2.5.0+ds-1) ... 2021-05-15T13:47:31.7190205Z Setting up libqt5network5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:31.7307196Z Setting up python3-bs4 (4.8.2-1) ... 2021-05-15T13:47:31.9209954Z Setting up libgeotiff5:amd64 (1.5.1-2) ... 2021-05-15T13:47:31.9327321Z Setting up gcr (3.36.0-2build1) ... 2021-05-15T13:47:31.9380760Z Setting up libqt5sql5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:31.9464674Z Setting up wpasupplicant (2:2.9-1ubuntu4.3) ... 2021-05-15T13:47:32.0975629Z Created symlink /etc/systemd/system/dbus-fi.w1.wpa_supplicant1.service → /lib/systemd/system/wpa_supplicant.service. 2021-05-15T13:47:32.0978505Z Created symlink /etc/systemd/system/multi-user.target.wants/wpa_supplicant.service → /lib/systemd/system/wpa_supplicant.service. 2021-05-15T13:47:32.6236664Z Setting up python3-pil:amd64 (7.0.0-4ubuntu0.3) ... 2021-05-15T13:47:32.8851759Z Setting up libqt5xml5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:32.8909725Z Setting up gstreamer1.0-plugins-base:amd64 (1.16.2-4) ... 2021-05-15T13:47:32.8979649Z Setting up libqt5qml5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T13:47:32.9063455Z Setting up qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:47:32.9134266Z Setting up qtattributionsscanner-qt5 (5.12.8-0ubuntu1) ... 2021-05-15T13:47:32.9201703Z Setting up libqt5webchannel5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T13:47:32.9282331Z Setting up python3-plotly (4.4.1+dfsg-1) ... 2021-05-15T13:47:33.0789324Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T13:47:33.0791216Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-05-15T13:47:33.0792675Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T13:47:33.0794039Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-05-15T13:47:33.1188212Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:194: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T13:47:33.1189571Z if direction is "increasing": 2021-05-15T13:47:33.1191581Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:199: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T13:47:33.1192527Z elif direction is "decreasing": 2021-05-15T13:47:33.1364359Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:176: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T13:47:33.1365638Z if direction is "increasing": 2021-05-15T13:47:33.1367089Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:179: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T13:47:33.1368114Z elif direction is "decreasing": 2021-05-15T13:47:34.0222429Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:460: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T13:47:34.0224178Z if props["offset_coordinates"] is "data": 2021-05-15T13:47:34.0226014Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:572: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-05-15T13:47:34.0227331Z if props["coordinates"] is not "data": 2021-05-15T13:47:34.8136270Z Setting up avahi-daemon (0.7-4ubuntu7) ... 2021-05-15T13:47:35.3699886Z Created symlink /etc/systemd/system/dbus-org.freedesktop.Avahi.service → /lib/systemd/system/avahi-daemon.service. 2021-05-15T13:47:35.3702258Z Created symlink /etc/systemd/system/multi-user.target.wants/avahi-daemon.service → /lib/systemd/system/avahi-daemon.service. 2021-05-15T13:47:35.3704311Z Created symlink /etc/systemd/system/sockets.target.wants/avahi-daemon.socket → /lib/systemd/system/avahi-daemon.socket. 2021-05-15T13:47:36.4891609Z Setting up libnss-mdns:amd64 (0.14.1-1ubuntu1) ... 2021-05-15T13:47:36.5020658Z First installation detected... 2021-05-15T13:47:36.5023062Z Checking NSS setup... 2021-05-15T13:47:36.5109246Z Setting up libwacom2:amd64 (1.3-2ubuntu3) ... 2021-05-15T13:47:36.5145219Z Setting up libqt5sql5-sqlite:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:36.5241909Z Setting up python3-owslib (0.19.1-1) ... 2021-05-15T13:47:36.7947028Z Setting up libgdal26 (3.0.4+dfsg-1build3) ... 2021-05-15T13:47:36.8041134Z Setting up libqmi-glib5:amd64 (1.24.8-1) ... 2021-05-15T13:47:36.8149946Z Setting up libpdal-base9 (2.0.1+ds-1build3) ... 2021-05-15T13:47:36.8252759Z Setting up libinput-bin (1.15.5-1ubuntu0.2) ... 2021-05-15T13:47:36.8345853Z Setting up libwacom-bin (1.3-2ubuntu3) ... 2021-05-15T13:47:36.8444045Z Setting up libpdal-plugin-pgpointcloud (2.0.1+ds-1build3) ... 2021-05-15T13:47:36.8533353Z Setting up libpdal-plugin-icebridge (2.0.1+ds-1build3) ... 2021-05-15T13:47:36.8631649Z Setting up libpdal-plugin-python (2.0.1+ds-1build3) ... 2021-05-15T13:47:36.8733498Z Setting up python3-gdal (3.0.4+dfsg-1build3) ... 2021-05-15T13:47:37.0560636Z Setting up libinput10:amd64 (1.15.5-1ubuntu0.2) ... 2021-05-15T13:47:37.0636484Z Setting up libpdal-plugin-faux (2.0.1+ds-1build3) ... 2021-05-15T13:47:37.0708576Z Setting up grass-core (7.8.2-1build3) ... 2021-05-15T13:47:37.4060396Z /usr/lib/grass78/etc/python/grass/pygrass/gis/__init__.py:75: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T13:47:37.4062426Z if value is '': 2021-05-15T13:47:37.5003438Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T13:47:37.5004880Z if do_profiling is "True" or do_profiling is "1": 2021-05-15T13:47:37.5006100Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T13:47:37.5007267Z if do_profiling is "True" or do_profiling is "1": 2021-05-15T13:47:37.5008567Z /usr/lib/grass78/etc/python/grass/temporal/core.py:582: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-05-15T13:47:37.5009699Z if driver_string is not None and driver_string is not "": 2021-05-15T13:47:37.5423338Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T13:47:37.5424932Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-05-15T13:47:37.5426324Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-15T13:47:37.5427559Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-05-15T13:47:37.6055046Z Setting up libpdal-plugin-sqlite (2.0.1+ds-1build3) ... 2021-05-15T13:47:37.6086589Z Setting up libqt5gui5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:37.6198749Z Setting up libqmi-proxy (1.24.8-1) ... 2021-05-15T13:47:37.6268672Z Setting up libqt5widgets5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:37.6343730Z Setting up libqt53dcore5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:37.6518720Z Setting up libqt5help5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T13:47:37.6541804Z Setting up libqt53dlogic5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:37.6563807Z Setting up qt5-gtk-platformtheme:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:37.6585492Z Setting up libqgis-native3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:47:37.6609084Z Setting up libqt5printsupport5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:37.6628889Z Setting up gdal-bin (3.0.4+dfsg-1build3) ... 2021-05-15T13:47:37.7516467Z Setting up qt5-image-formats-plugins:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T13:47:37.7607077Z Setting up libqt53dinput5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:37.7679683Z Setting up libqt5opengl5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:37.7782218Z Setting up modemmanager (1.12.8-1) ... 2021-05-15T13:47:37.9015648Z Created symlink /etc/systemd/system/dbus-org.freedesktop.ModemManager1.service → /lib/systemd/system/ModemManager.service. 2021-05-15T13:47:37.9018573Z Created symlink /etc/systemd/system/multi-user.target.wants/ModemManager.service → /lib/systemd/system/ModemManager.service. 2021-05-15T13:47:38.6220582Z Setting up libqt5quick5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T13:47:38.6224983Z Setting up libqt5designer5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T13:47:38.6226409Z Setting up libpdal-plugins (2.0.1+ds-1build3) ... 2021-05-15T13:47:38.6227363Z Setting up libqt5svg5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T13:47:38.6228367Z Setting up libqt53drender5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:38.6229420Z Setting up qhelpgenerator-qt5 (5.12.8-0ubuntu1) ... 2021-05-15T13:47:38.6230379Z Setting up libqwt-qt5-6 (6.1.4-1.1build1) ... 2021-05-15T13:47:38.6231346Z Setting up libqscintilla2-qt5-15 (2.11.2+dfsg-6) ... 2021-05-15T13:47:38.6232557Z Setting up libqt5webkit5:amd64 (5.212.0~alpha4-1ubuntu2) ... 2021-05-15T13:47:38.6233742Z Setting up libqt5designercomponents5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T13:47:38.6234873Z Setting up libqt5quickwidgets5:amd64 (5.12.8-0ubuntu1) ... 2021-05-15T13:47:38.6235943Z Setting up libqgis-core3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:47:38.6237067Z Setting up libqt53dquickscene2d5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:38.6238175Z Setting up libqgis-gui3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:47:38.6239288Z Setting up libqgis-analysis3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:47:38.6240286Z Setting up qt5-assistant (5.12.8-0ubuntu1) ... 2021-05-15T13:47:38.6241218Z Setting up qttools5-dev-tools (5.12.8-0ubuntu1) ... 2021-05-15T13:47:38.6242267Z Setting up libqgispython3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:47:38.6243444Z Setting up qt3d-scene2d-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:38.6244483Z Setting up python3-pyqt5 (5.14.1+dfsg-3build1) ... 2021-05-15T13:47:38.7729482Z Setting up python3-pyqt5.qtsvg (5.14.1+dfsg-3build1) ... 2021-05-15T13:47:38.7840636Z Setting up libqt53danimation5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:38.7957806Z Setting up qt3d-defaultgeometryloader-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:47:38.8051600Z Setting up qgis-providers (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:48:09.7272850Z Setting up libqt53dextras5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:48:09.7320050Z Setting up python3-pyqt5.qtsql (5.14.1+dfsg-3build1) ... 2021-05-15T13:48:09.7389270Z Setting up libqgis-customwidgets (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:48:09.7426786Z Setting up qt3d-gltfsceneio-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:48:09.7517788Z Setting up libqgis-server3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:48:09.7572163Z Setting up libqgisgrass7-3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:48:09.7640235Z Setting up qt3d-assimpsceneimport-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-15T13:48:09.7711459Z Setting up python3-qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:48:09.9108615Z Setting up libqgis-3d3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:48:09.9202026Z Setting up python3-pyqt5.qtwebkit (5.14.1+dfsg-3build1) ... 2021-05-15T13:48:09.9239325Z Setting up qgis-provider-grass (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:48:09.9277159Z Setting up python3-pyqt5.qsci (2.11.2+dfsg-6) ... 2021-05-15T13:48:09.9322918Z Setting up python3-qgis (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:48:10.0936340Z Setting up libqgis-app3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:48:10.0989176Z Setting up qgis (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:48:10.1013825Z Setting up qgis-plugin-grass (3.10.4+dfsg-1ubuntu2) ... 2021-05-15T13:48:10.1151799Z Processing triggers for dbus (1.12.16-2ubuntu2.1) ... 2021-05-15T13:48:10.1315150Z Processing triggers for shared-mime-info (1.15-1) ... 2021-05-15T13:48:11.7097200Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-15T13:48:11.7280430Z Processing triggers for mime-support (3.64ubuntu1) ... 2021-05-15T13:48:11.7554786Z Processing triggers for hicolor-icon-theme (0.17-2) ... 2021-05-15T13:48:11.7755974Z Processing triggers for libglib2.0-0:amd64 (2.64.6-1~ubuntu20.04.3) ... 2021-05-15T13:48:11.9378345Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-15T13:48:11.9677219Z Processing triggers for systemd (245.4-4ubuntu3.6) ... 2021-05-15T13:48:12.2055647Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:48:22.4898649Z Setting up pinentry-gnome3 (1.1.0-3build1) ... 2021-05-15T13:48:22.5174174Z Setting up gnome-keyring (3.36.0-1ubuntu1) ... 2021-05-15T13:48:24.4318077Z ##[group]Run adigherman/actions/get-repo-name@master 2021-05-15T13:48:24.4318582Z with: 2021-05-15T13:48:24.4319031Z github_slug: neuroconductor/dcmtk 2021-05-15T13:48:24.4319447Z env: 2021-05-15T13:48:24.4319843Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T13:48:24.4320284Z TIC_DEPLOY_KEY: 2021-05-15T13:48:24.4321029Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T13:48:24.4322737Z GITHUB_PAT: *** 2021-05-15T13:48:24.4323108Z COVERALLS_TOKEN: 2021-05-15T13:48:24.4323568Z continue-on-error: true 2021-05-15T13:48:24.4323995Z VDIFFR_RUN_TESTS: 2021-05-15T13:48:24.4324449Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T13:48:24.4324869Z TZ: UTC 2021-05-15T13:48:24.4325220Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T13:48:24.4325606Z NOT_CRAN: true 2021-05-15T13:48:24.4325943Z ##[endgroup] 2021-05-15T13:48:24.4644727Z repo slug is: neuroconductor/dcmtk 2021-05-15T13:48:24.4734114Z ##[group]Run adigherman/actions/get-repo-version@master 2021-05-15T13:48:24.4734654Z env: 2021-05-15T13:48:24.4735056Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T13:48:24.4735504Z TIC_DEPLOY_KEY: 2021-05-15T13:48:24.4736254Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T13:48:24.4737684Z GITHUB_PAT: *** 2021-05-15T13:48:24.4738045Z COVERALLS_TOKEN: 2021-05-15T13:48:24.4738505Z continue-on-error: true 2021-05-15T13:48:24.4738947Z VDIFFR_RUN_TESTS: 2021-05-15T13:48:24.4739388Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T13:48:24.4739810Z TZ: UTC 2021-05-15T13:48:24.4740162Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T13:48:24.4740551Z NOT_CRAN: true 2021-05-15T13:48:24.4740892Z ##[endgroup] 2021-05-15T13:48:24.6783162Z ##[group]Run adigherman/actions/get-release-asset@master 2021-05-15T13:48:24.6783719Z with: 2021-05-15T13:48:24.6784048Z repo_name: dcmtk 2021-05-15T13:48:24.6784436Z repo_version: 0.6.8.1 2021-05-15T13:48:24.6784791Z runner_os: Linux 2021-05-15T13:48:24.6785143Z R_version: 4.1 2021-05-15T13:48:24.6785454Z env: 2021-05-15T13:48:24.6785861Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T13:48:24.6786287Z TIC_DEPLOY_KEY: 2021-05-15T13:48:24.6787042Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T13:48:24.6788765Z GITHUB_PAT: *** 2021-05-15T13:48:24.6789133Z COVERALLS_TOKEN: 2021-05-15T13:48:24.6789583Z continue-on-error: true 2021-05-15T13:48:24.6790016Z VDIFFR_RUN_TESTS: 2021-05-15T13:48:24.6790472Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T13:48:24.6790877Z TZ: UTC 2021-05-15T13:48:24.6791241Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T13:48:24.6791617Z NOT_CRAN: true 2021-05-15T13:48:24.6791990Z ##[endgroup] 2021-05-15T13:48:24.7155420Z Package: dcmtk 2021-05-15T13:48:24.7159331Z Version: 0.6.8.1 2021-05-15T13:48:24.7160971Z OS: Linux 2021-05-15T13:48:24.7209680Z ##[group]Run install.packages('remotes') 2021-05-15T13:48:24.7210353Z install.packages('remotes') 2021-05-15T13:48:24.7211099Z saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) 2021-05-15T13:48:24.7212034Z writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") 2021-05-15T13:48:24.7219340Z shell: /usr/local/bin/Rscript {0} 2021-05-15T13:48:24.7219738Z env: 2021-05-15T13:48:24.7220140Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T13:48:24.7220582Z TIC_DEPLOY_KEY: 2021-05-15T13:48:24.7221344Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T13:48:24.7222582Z GITHUB_PAT: *** 2021-05-15T13:48:24.7222959Z COVERALLS_TOKEN: 2021-05-15T13:48:24.7223401Z continue-on-error: true 2021-05-15T13:48:24.7223846Z VDIFFR_RUN_TESTS: 2021-05-15T13:48:24.7224290Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T13:48:24.7224716Z TZ: UTC 2021-05-15T13:48:24.7225197Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T13:48:24.7225581Z NOT_CRAN: true 2021-05-15T13:48:24.7225922Z ##[endgroup] 2021-05-15T13:48:24.8963291Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-15T13:48:24.8965015Z (as ‘lib’ is unspecified) 2021-05-15T13:48:39.6025631Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/remotes_2.3.0.tar.gz' 2021-05-15T13:48:40.1081650Z Content type 'binary/octet-stream' length 148709 bytes (145 KB) 2021-05-15T13:48:40.1188665Z ================================================== 2021-05-15T13:48:40.1189574Z downloaded 145 KB 2021-05-15T13:48:40.1190098Z 2021-05-15T13:48:40.4064185Z * installing *source* package ‘remotes’ ... 2021-05-15T13:48:40.4105166Z ** package ‘remotes’ successfully unpacked and MD5 sums checked 2021-05-15T13:48:40.4106446Z ** using staged installation 2021-05-15T13:48:40.4270474Z ** R 2021-05-15T13:48:40.4457577Z ** inst 2021-05-15T13:48:40.4469842Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:48:42.1274982Z ** help 2021-05-15T13:48:42.2146984Z *** installing help indices 2021-05-15T13:48:42.2743521Z ** building package indices 2021-05-15T13:48:42.5097830Z ** installing vignettes 2021-05-15T13:48:42.5133615Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:48:42.6901187Z ** testing if installed package can be loaded from final location 2021-05-15T13:48:42.8995041Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:48:42.9019374Z * DONE (remotes) 2021-05-15T13:48:42.9097431Z 2021-05-15T13:48:42.9098188Z The downloaded source packages are in 2021-05-15T13:48:42.9099593Z ‘/tmp/RtmpPXDNKg/downloaded_packages’ 2021-05-15T13:48:59.6950866Z ##[group]Run actions/cache@v1 2021-05-15T13:48:59.6951280Z with: 2021-05-15T13:48:59.6951697Z path: /home/runner/work/_temp/Library 2021-05-15T13:48:59.6954501Z key: Linux-e3adb7ee20b68d8bd651f6f30d4cc1690a70853cf8f0c4dcbc5c14b00f693a6a-1-b53c7d6a129772880d2e6a05e7bb51f2213cf8a7636f47516eb352e0541827c5 2021-05-15T13:48:59.6958157Z restore-keys: Linux-e3adb7ee20b68d8bd651f6f30d4cc1690a70853cf8f0c4dcbc5c14b00f693a6a-1- 2021-05-15T13:48:59.6959342Z env: 2021-05-15T13:48:59.6959763Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T13:48:59.6960195Z TIC_DEPLOY_KEY: 2021-05-15T13:48:59.6960959Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T13:48:59.6962810Z GITHUB_PAT: *** 2021-05-15T13:48:59.6963177Z COVERALLS_TOKEN: 2021-05-15T13:48:59.6963631Z continue-on-error: true 2021-05-15T13:48:59.6964058Z VDIFFR_RUN_TESTS: 2021-05-15T13:48:59.6964512Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T13:48:59.6964982Z TZ: UTC 2021-05-15T13:48:59.6965333Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T13:48:59.6965715Z NOT_CRAN: true 2021-05-15T13:48:59.6966060Z ##[endgroup] 2021-05-15T13:48:59.7374236Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-05-15T13:48:59.7431703Z ##[group]Run Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-05-15T13:48:59.7432579Z Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-05-15T13:48:59.7433365Z sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") 2021-05-15T13:48:59.7434036Z sudo -s eval "$sysreqs" 2021-05-15T13:48:59.7477353Z shell: /usr/bin/bash -e {0} 2021-05-15T13:48:59.7477736Z env: 2021-05-15T13:48:59.7478137Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T13:48:59.7478579Z TIC_DEPLOY_KEY: 2021-05-15T13:48:59.7479328Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T13:48:59.7480611Z GITHUB_PAT: *** 2021-05-15T13:48:59.7480973Z COVERALLS_TOKEN: 2021-05-15T13:48:59.7481423Z continue-on-error: true 2021-05-15T13:48:59.7481862Z VDIFFR_RUN_TESTS: 2021-05-15T13:48:59.7482301Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T13:48:59.7482718Z TZ: UTC 2021-05-15T13:48:59.7483232Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T13:48:59.7483606Z NOT_CRAN: true 2021-05-15T13:48:59.7484047Z RHUB_PLATFORM: linux-x86_64-ubuntu-gcc 2021-05-15T13:48:59.7484487Z ##[endgroup] 2021-05-15T13:48:59.9313673Z Using github PAT from envvar GITHUB_PAT 2021-05-15T13:49:00.4635521Z Downloading GitHub repo r-hub/sysreqs@HEAD 2021-05-15T13:49:15.6661689Z rprojroot (NA -> 2.0.2) [CRAN] 2021-05-15T13:49:15.6662490Z crayon (NA -> 1.4.1) [CRAN] 2021-05-15T13:49:15.6663113Z R6 (NA -> 2.5.0) [CRAN] 2021-05-15T13:49:15.6663741Z desc (NA -> 1.3.0) [CRAN] 2021-05-15T13:49:15.6664375Z debugme (NA -> 1.1.0) [CRAN] 2021-05-15T13:49:15.6683485Z Installing 5 packages: rprojroot, crayon, R6, desc, debugme 2021-05-15T13:49:15.6695046Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-15T13:49:15.6695897Z (as ‘lib’ is unspecified) 2021-05-15T13:49:30.0147154Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rprojroot_2.0.2.tar.gz' 2021-05-15T13:49:30.4086679Z Content type 'binary/octet-stream' length 61445 bytes (60 KB) 2021-05-15T13:49:30.4088188Z ================================================== 2021-05-15T13:49:30.4088901Z downloaded 60 KB 2021-05-15T13:49:30.4089413Z 2021-05-15T13:49:30.4125769Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/crayon_1.4.1.tar.gz' 2021-05-15T13:49:30.8007523Z Content type 'binary/octet-stream' length 35834 bytes (34 KB) 2021-05-15T13:49:30.8009695Z ================================================== 2021-05-15T13:49:30.8010196Z downloaded 34 KB 2021-05-15T13:49:30.8010502Z 2021-05-15T13:49:30.8048744Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R6_2.5.0.tar.gz' 2021-05-15T13:49:31.3102742Z Content type 'binary/octet-stream' length 64110 bytes (62 KB) 2021-05-15T13:49:31.3126910Z ================================================== 2021-05-15T13:49:31.3127517Z downloaded 62 KB 2021-05-15T13:49:31.3127826Z 2021-05-15T13:49:31.3152742Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/desc_1.3.0.tar.gz' 2021-05-15T13:49:31.8110026Z Content type 'binary/octet-stream' length 292756 bytes (285 KB) 2021-05-15T13:49:31.8270496Z ================================================== 2021-05-15T13:49:31.8271049Z downloaded 285 KB 2021-05-15T13:49:31.8271325Z 2021-05-15T13:49:31.8311385Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/debugme_1.1.0.tar.gz' 2021-05-15T13:49:32.2197134Z Content type 'application/x-tar' length 997019 bytes (973 KB) 2021-05-15T13:49:32.2493615Z ================================================== 2021-05-15T13:49:32.2494349Z downloaded 973 KB 2021-05-15T13:49:32.2494869Z 2021-05-15T13:49:32.4969402Z * installing *source* package ‘rprojroot’ ... 2021-05-15T13:49:32.4995773Z ** package ‘rprojroot’ successfully unpacked and MD5 sums checked 2021-05-15T13:49:32.4998962Z ** using staged installation 2021-05-15T13:49:32.5135463Z ** R 2021-05-15T13:49:32.5183312Z ** inst 2021-05-15T13:49:32.5194371Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:49:32.9856749Z ** help 2021-05-15T13:49:33.0115117Z *** installing help indices 2021-05-15T13:49:33.0388170Z *** copying figures 2021-05-15T13:49:33.0393766Z ** building package indices 2021-05-15T13:49:33.6541682Z ** installing vignettes 2021-05-15T13:49:33.6544142Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:49:33.6545454Z ** testing if installed package can be loaded from final location 2021-05-15T13:49:33.6546648Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:49:33.6547531Z * DONE (rprojroot) 2021-05-15T13:49:33.8212717Z * installing *source* package ‘crayon’ ... 2021-05-15T13:49:33.8229406Z ** package ‘crayon’ successfully unpacked and MD5 sums checked 2021-05-15T13:49:33.8230328Z ** using staged installation 2021-05-15T13:49:33.8356902Z ** R 2021-05-15T13:49:33.8440714Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:49:34.6657506Z ** help 2021-05-15T13:49:34.7167830Z *** installing help indices 2021-05-15T13:49:34.7526162Z ** building package indices 2021-05-15T13:49:34.9702532Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:49:35.1428474Z ** testing if installed package can be loaded from final location 2021-05-15T13:49:35.3243799Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:49:35.3254518Z * DONE (crayon) 2021-05-15T13:49:35.5489970Z * installing *source* package ‘R6’ ... 2021-05-15T13:49:35.5504565Z ** package ‘R6’ successfully unpacked and MD5 sums checked 2021-05-15T13:49:35.5505644Z ** using staged installation 2021-05-15T13:49:35.5627832Z ** R 2021-05-15T13:49:35.5690829Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:49:36.0401731Z ** help 2021-05-15T13:49:36.0595535Z *** installing help indices 2021-05-15T13:49:36.0785889Z *** copying figures 2021-05-15T13:49:36.0789150Z ** building package indices 2021-05-15T13:49:36.2666560Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:49:36.4379372Z ** testing if installed package can be loaded from final location 2021-05-15T13:49:36.6117555Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:49:36.6124988Z * DONE (R6) 2021-05-15T13:49:36.9116092Z * installing *source* package ‘desc’ ... 2021-05-15T13:49:36.9163912Z ** package ‘desc’ successfully unpacked and MD5 sums checked 2021-05-15T13:49:36.9165111Z ** using staged installation 2021-05-15T13:49:36.9312499Z ** R 2021-05-15T13:49:36.9434773Z ** inst 2021-05-15T13:49:36.9449850Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:49:38.4556136Z ** help 2021-05-15T13:49:38.5812250Z *** installing help indices 2021-05-15T13:49:38.6672104Z ** building package indices 2021-05-15T13:49:38.9294941Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:49:39.1127863Z ** testing if installed package can be loaded from final location 2021-05-15T13:49:39.3289744Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:49:39.3306648Z * DONE (desc) 2021-05-15T13:49:39.5744518Z * installing *source* package ‘debugme’ ... 2021-05-15T13:49:39.5777378Z ** package ‘debugme’ successfully unpacked and MD5 sums checked 2021-05-15T13:49:39.5778702Z ** using staged installation 2021-05-15T13:49:39.5883253Z ** R 2021-05-15T13:49:39.5913303Z ** inst 2021-05-15T13:49:39.5934108Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:49:39.8977584Z ** help 2021-05-15T13:49:39.9095267Z *** installing help indices 2021-05-15T13:49:39.9305856Z ** building package indices 2021-05-15T13:49:40.1158216Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:49:40.2951940Z ** testing if installed package can be loaded from final location 2021-05-15T13:49:40.4714274Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:49:40.4720829Z * DONE (debugme) 2021-05-15T13:49:40.4778291Z 2021-05-15T13:49:40.4779376Z The downloaded source packages are in 2021-05-15T13:49:40.4780784Z ‘/tmp/RtmpbBSjxI/downloaded_packages’ 2021-05-15T13:49:40.4789130Z Running `R CMD build`... 2021-05-15T13:49:40.7098895Z * checking for file ‘/tmp/RtmpbBSjxI/remotes699ee2d0a1f/r-hub-sysreqs-f068afa/DESCRIPTION’ ... OK 2021-05-15T13:49:40.7100440Z * preparing ‘sysreqs’: 2021-05-15T13:49:40.7101435Z * checking DESCRIPTION meta-information ... OK 2021-05-15T13:49:40.7102755Z * checking for LF line-endings in source and make files and shell scripts 2021-05-15T13:49:40.7103717Z * checking for empty or unneeded directories 2021-05-15T13:49:40.7104670Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-15T13:49:40.7105595Z * building ‘sysreqs_1.0.0.9000.tar.gz’ 2021-05-15T13:49:40.7106441Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-15T13:49:40.7107175Z (as ‘lib’ is unspecified) 2021-05-15T13:49:40.9087723Z * installing *source* package ‘sysreqs’ ... 2021-05-15T13:49:40.9089463Z ** using staged installation 2021-05-15T13:49:40.9213384Z ** R 2021-05-15T13:49:40.9244237Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:49:41.2777458Z ** help 2021-05-15T13:49:41.2964893Z *** installing help indices 2021-05-15T13:49:41.3126463Z ** building package indices 2021-05-15T13:49:41.4944976Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:49:41.6818446Z ** testing if installed package can be loaded from final location 2021-05-15T13:49:41.8679906Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:49:41.8681333Z * DONE (sysreqs) 2021-05-15T13:49:58.7063898Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-05-15T13:49:58.7066167Z Hit:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease 2021-05-15T13:49:58.7067794Z Hit:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease 2021-05-15T13:49:58.7271230Z Hit:4 http://security.ubuntu.com/ubuntu focal-security InRelease 2021-05-15T13:49:58.7857516Z Hit:5 https://download.mono-project.com/repo/ubuntu stable-focal InRelease 2021-05-15T13:49:58.8534234Z Hit:6 http://ppa.launchpad.net/apt-fast/stable/ubuntu focal InRelease 2021-05-15T13:49:58.9788088Z Hit:7 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease 2021-05-15T13:49:59.0142089Z Hit:8 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease 2021-05-15T13:49:59.1700432Z Hit:9 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-05-15T13:50:00.4011219Z Reading package lists... 2021-05-15T13:50:00.4759092Z Reading package lists... 2021-05-15T13:50:00.6561203Z Building dependency tree... 2021-05-15T13:50:00.6583660Z Reading state information... 2021-05-15T13:50:00.8223823Z cmake is already the newest version (3.16.3-1ubuntu1). 2021-05-15T13:50:00.8227748Z libicu-dev is already the newest version (66.1-2ubuntu2). 2021-05-15T13:50:00.8228655Z libicu-dev set to manually installed. 2021-05-15T13:50:00.8229627Z libpng-dev is already the newest version (1.6.37-2). 2021-05-15T13:50:00.8230506Z make is already the newest version (4.2.1-1.2). 2021-05-15T13:50:00.8231156Z make set to manually installed. 2021-05-15T13:50:00.8232097Z libgit2-dev is already the newest version (0.28.4+dfsg.1-2). 2021-05-15T13:50:00.8233130Z libssh2-1-dev is already the newest version (1.8.0-2.1build1). 2021-05-15T13:50:00.8234066Z libssh2-1-dev set to manually installed. 2021-05-15T13:50:00.8235058Z libssl-dev is already the newest version (1.1.1f-1ubuntu2.3). 2021-05-15T13:50:00.8236182Z zlib1g-dev is already the newest version (1:1.2.11.dfsg-2ubuntu1.2). 2021-05-15T13:50:00.8236885Z Suggested packages: 2021-05-15T13:50:00.8237820Z libcurl4-doc libidn11-dev libldap2-dev librtmp-dev 2021-05-15T13:50:00.8682295Z The following NEW packages will be installed: 2021-05-15T13:50:00.8689252Z libcurl4-openssl-dev 2021-05-15T13:50:00.8881153Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-15T13:50:00.8882488Z Need to get 321 kB of archives. 2021-05-15T13:50:00.8883395Z After this operation, 1539 kB of additional disk space will be used. 2021-05-15T13:50:00.8885820Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcurl4-openssl-dev amd64 7.68.0-1ubuntu2.5 [321 kB] 2021-05-15T13:50:01.3226053Z Fetched 321 kB in 0s (14.5 MB/s) 2021-05-15T13:50:01.3570264Z Selecting previously unselected package libcurl4-openssl-dev:amd64. 2021-05-15T13:50:01.3656291Z (Reading database ... 2021-05-15T13:50:01.3657397Z (Reading database ... 5% 2021-05-15T13:50:01.3658230Z (Reading database ... 10% 2021-05-15T13:50:01.3658706Z (Reading database ... 15% 2021-05-15T13:50:01.3659154Z (Reading database ... 20% 2021-05-15T13:50:01.3659616Z (Reading database ... 25% 2021-05-15T13:50:01.3660061Z (Reading database ... 30% 2021-05-15T13:50:01.3660517Z (Reading database ... 35% 2021-05-15T13:50:01.3660963Z (Reading database ... 40% 2021-05-15T13:50:01.3661425Z (Reading database ... 45% 2021-05-15T13:50:01.3662103Z (Reading database ... 50% 2021-05-15T13:50:01.3708577Z (Reading database ... 55% 2021-05-15T13:50:01.3759494Z (Reading database ... 60% 2021-05-15T13:50:01.3804281Z (Reading database ... 65% 2021-05-15T13:50:01.4007263Z (Reading database ... 70% 2021-05-15T13:50:01.4040843Z (Reading database ... 75% 2021-05-15T13:50:01.4326447Z (Reading database ... 80% 2021-05-15T13:50:01.4442474Z (Reading database ... 85% 2021-05-15T13:50:01.4865918Z (Reading database ... 90% 2021-05-15T13:50:01.4948574Z (Reading database ... 95% 2021-05-15T13:50:01.4951520Z (Reading database ... 100% 2021-05-15T13:50:01.4952352Z (Reading database ... 285139 files and directories currently installed.) 2021-05-15T13:50:01.5093849Z Preparing to unpack .../libcurl4-openssl-dev_7.68.0-1ubuntu2.5_amd64.deb ... 2021-05-15T13:50:01.5109082Z Unpacking libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-05-15T13:50:01.6101017Z Setting up libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-05-15T13:50:01.6185627Z Processing triggers for man-db (2.9.1-1) ... 2021-05-15T13:50:06.6264298Z ##[group]Run remotes::install_github("ropensci/tic") 2021-05-15T13:50:06.6264957Z remotes::install_github("ropensci/tic") 2021-05-15T13:50:06.6265579Z remotes::install_github("muschellij2/ghtravis") 2021-05-15T13:50:06.6266212Z remotes::install_github("muschellij2/aghast") 2021-05-15T13:50:06.6266804Z remotes::install_cran("covr") 2021-05-15T13:50:06.6273690Z shell: /usr/local/bin/Rscript {0} 2021-05-15T13:50:06.6274092Z env: 2021-05-15T13:50:06.6274543Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T13:50:06.6275004Z TIC_DEPLOY_KEY: 2021-05-15T13:50:06.6275757Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T13:50:06.6277452Z GITHUB_PAT: *** 2021-05-15T13:50:06.6277821Z COVERALLS_TOKEN: 2021-05-15T13:50:06.6278276Z continue-on-error: true 2021-05-15T13:50:06.6278719Z VDIFFR_RUN_TESTS: 2021-05-15T13:50:06.6279159Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T13:50:06.6279627Z TZ: UTC 2021-05-15T13:50:06.6279995Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T13:50:06.6280371Z NOT_CRAN: true 2021-05-15T13:50:06.6280727Z ##[endgroup] 2021-05-15T13:50:06.8144605Z Using github PAT from envvar GITHUB_PAT 2021-05-15T13:50:07.3672944Z Downloading GitHub repo ropensci/tic@HEAD 2021-05-15T13:50:23.1707539Z rlang (NA -> 0.4.11) [CRAN] 2021-05-15T13:50:23.1708301Z magrittr (NA -> 2.0.1 ) [CRAN] 2021-05-15T13:50:23.1708960Z glue (NA -> 1.4.2 ) [CRAN] 2021-05-15T13:50:23.1709578Z sys (NA -> 3.4 ) [CRAN] 2021-05-15T13:50:23.1710223Z askpass (NA -> 1.1 ) [CRAN] 2021-05-15T13:50:23.1710885Z openssl (NA -> 1.4.4 ) [CRAN] 2021-05-15T13:50:23.1711524Z mime (NA -> 0.10 ) [CRAN] 2021-05-15T13:50:23.1712151Z curl (NA -> 4.3.1 ) [CRAN] 2021-05-15T13:50:23.1712783Z jsonlite (NA -> 1.7.2 ) [CRAN] 2021-05-15T13:50:23.1713421Z ini (NA -> 0.3.1 ) [CRAN] 2021-05-15T13:50:23.1714029Z httr (NA -> 1.4.2 ) [CRAN] 2021-05-15T13:50:23.1714716Z gitcreds (NA -> 0.1.1 ) [CRAN] 2021-05-15T13:50:23.1715347Z cli (NA -> 2.5.0 ) [CRAN] 2021-05-15T13:50:23.1715963Z zip (NA -> 2.1.1 ) [CRAN] 2021-05-15T13:50:23.1716606Z rstudioapi (NA -> 0.13 ) [CRAN] 2021-05-15T13:50:23.1717308Z credentials (NA -> 1.3.0 ) [CRAN] 2021-05-15T13:50:23.1717988Z fastmap (NA -> 1.1.0 ) [CRAN] 2021-05-15T13:50:23.1718618Z yaml (NA -> 2.2.1 ) [CRAN] 2021-05-15T13:50:23.1719244Z withr (NA -> 2.4.2 ) [CRAN] 2021-05-15T13:50:23.1719872Z whisker (NA -> 0.4 ) [CRAN] 2021-05-15T13:50:23.1720529Z rappdirs (NA -> 0.3.3 ) [CRAN] 2021-05-15T13:50:23.1721172Z purrr (NA -> 0.3.4 ) [CRAN] 2021-05-15T13:50:23.1721839Z lifecycle (NA -> 1.0.0 ) [CRAN] 2021-05-15T13:50:23.1722481Z gh (NA -> 1.3.0 ) [CRAN] 2021-05-15T13:50:23.1723104Z gert (NA -> 1.3.0 ) [CRAN] 2021-05-15T13:50:23.1723722Z fs (NA -> 1.5.0 ) [CRAN] 2021-05-15T13:50:23.1724336Z clipr (NA -> 0.7.1 ) [CRAN] 2021-05-15T13:50:23.1725315Z cachem (NA -> 1.0.5 ) [CRAN] 2021-05-15T13:50:23.1725957Z usethis (NA -> 2.0.1 ) [CRAN] 2021-05-15T13:50:23.1726613Z memoise (NA -> 2.0.0 ) [CRAN] 2021-05-15T13:50:23.1727248Z git2r (NA -> 0.28.0) [CRAN] 2021-05-15T13:50:23.1735705Z Installing 31 packages: rlang, magrittr, glue, sys, askpass, openssl, mime, curl, jsonlite, ini, httr, gitcreds, cli, zip, rstudioapi, credentials, fastmap, yaml, withr, whisker, rappdirs, purrr, lifecycle, gh, gert, fs, clipr, cachem, usethis, memoise, git2r 2021-05-15T13:50:23.1747296Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-15T13:50:23.1748134Z (as ‘lib’ is unspecified) 2021-05-15T13:50:37.6546652Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rlang_0.4.11.tar.gz' 2021-05-15T13:50:37.9358140Z Content type 'binary/octet-stream' length 859995 bytes (839 KB) 2021-05-15T13:50:37.9624857Z ================================================== 2021-05-15T13:50:37.9625806Z downloaded 839 KB 2021-05-15T13:50:37.9626638Z 2021-05-15T13:50:37.9665262Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/magrittr_2.0.1.tar.gz' 2021-05-15T13:50:38.3523919Z Content type 'binary/octet-stream' length 264532 bytes (258 KB) 2021-05-15T13:50:38.3709202Z ================================================== 2021-05-15T13:50:38.3710224Z downloaded 258 KB 2021-05-15T13:50:38.3710810Z 2021-05-15T13:50:38.3749296Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/glue_1.4.2.tar.gz' 2021-05-15T13:50:38.7563969Z Content type 'binary/octet-stream' length 100043 bytes (97 KB) 2021-05-15T13:50:38.7664046Z ================================================== 2021-05-15T13:50:38.7664546Z downloaded 97 KB 2021-05-15T13:50:38.7664818Z 2021-05-15T13:50:38.7701069Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sys_3.4.tar.gz' 2021-05-15T13:50:38.9404586Z Content type 'binary/octet-stream' length 20291 bytes (19 KB) 2021-05-15T13:50:38.9427427Z ================================================== 2021-05-15T13:50:38.9427873Z downloaded 19 KB 2021-05-15T13:50:38.9428141Z 2021-05-15T13:50:38.9465970Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/askpass_1.1.tar.gz' 2021-05-15T13:50:39.3284876Z Content type 'application/x-tar' length 5688 bytes 2021-05-15T13:50:39.3287058Z ================================================== 2021-05-15T13:50:39.3287526Z downloaded 5688 bytes 2021-05-15T13:50:39.3287791Z 2021-05-15T13:50:39.3327437Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/openssl_1.4.4.tar.gz' 2021-05-15T13:50:39.5201716Z Content type 'binary/octet-stream' length 1311683 bytes (1.3 MB) 2021-05-15T13:50:39.5501412Z ================================================== 2021-05-15T13:50:39.5502014Z downloaded 1.3 MB 2021-05-15T13:50:39.5502291Z 2021-05-15T13:50:39.5542181Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/mime_0.10.tar.gz' 2021-05-15T13:50:39.9419903Z Content type 'binary/octet-stream' length 12958 bytes (12 KB) 2021-05-15T13:50:39.9421268Z ================================================== 2021-05-15T13:50:39.9422226Z downloaded 12 KB 2021-05-15T13:50:39.9422560Z 2021-05-15T13:50:39.9458070Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/curl_4.3.1.tar.gz' 2021-05-15T13:50:40.2267478Z Content type 'binary/octet-stream' length 798588 bytes (779 KB) 2021-05-15T13:50:40.2536370Z ================================================== 2021-05-15T13:50:40.2537094Z downloaded 779 KB 2021-05-15T13:50:40.2537353Z 2021-05-15T13:50:40.2575593Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/jsonlite_1.7.2.tar.gz' 2021-05-15T13:50:40.5326834Z Content type 'binary/octet-stream' length 422264 bytes (412 KB) 2021-05-15T13:50:40.5531043Z ================================================== 2021-05-15T13:50:40.5531608Z downloaded 412 KB 2021-05-15T13:50:40.5532081Z 2021-05-15T13:50:40.5573118Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ini_0.3.1.tar.gz' 2021-05-15T13:50:40.8262083Z Content type 'application/x-tar' length 3475 bytes 2021-05-15T13:50:40.8262736Z ================================================== 2021-05-15T13:50:40.8263168Z downloaded 3475 bytes 2021-05-15T13:50:40.8263451Z 2021-05-15T13:50:40.8301104Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/httr_1.4.2.tar.gz' 2021-05-15T13:50:41.0989257Z Content type 'binary/octet-stream' length 159877 bytes (156 KB) 2021-05-15T13:50:41.1112191Z ================================================== 2021-05-15T13:50:41.1113111Z downloaded 156 KB 2021-05-15T13:50:41.1113592Z 2021-05-15T13:50:41.1151752Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gitcreds_0.1.1.tar.gz' 2021-05-15T13:50:41.3848245Z Content type 'binary/octet-stream' length 62129 bytes (60 KB) 2021-05-15T13:50:41.3908353Z ================================================== 2021-05-15T13:50:41.3909887Z downloaded 60 KB 2021-05-15T13:50:41.3910181Z 2021-05-15T13:50:41.3943205Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cli_2.5.0.tar.gz' 2021-05-15T13:50:41.6657662Z Content type 'binary/octet-stream' length 158132 bytes (154 KB) 2021-05-15T13:50:41.6781182Z ================================================== 2021-05-15T13:50:41.6781665Z downloaded 154 KB 2021-05-15T13:50:41.6781966Z 2021-05-15T13:50:41.6819018Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/zip_2.1.1.tar.gz' 2021-05-15T13:50:41.8708766Z Content type 'binary/octet-stream' length 113091 bytes (110 KB) 2021-05-15T13:50:41.8826440Z ================================================== 2021-05-15T13:50:41.8827313Z downloaded 110 KB 2021-05-15T13:50:41.8827785Z 2021-05-15T13:50:41.8865734Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rstudioapi_0.13.tar.gz' 2021-05-15T13:50:42.1696377Z Content type 'binary/octet-stream' length 109870 bytes (107 KB) 2021-05-15T13:50:42.1795110Z ================================================== 2021-05-15T13:50:42.1795964Z downloaded 107 KB 2021-05-15T13:50:42.1796539Z 2021-05-15T13:50:42.1828958Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/credentials_1.3.0.tar.gz' 2021-05-15T13:50:42.4602266Z Content type 'binary/octet-stream' length 230676 bytes (225 KB) 2021-05-15T13:50:42.4767057Z ================================================== 2021-05-15T13:50:42.4767574Z downloaded 225 KB 2021-05-15T13:50:42.4767829Z 2021-05-15T13:50:42.4809257Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fastmap_1.1.0.tar.gz' 2021-05-15T13:50:42.6508761Z Content type 'binary/octet-stream' length 44517 bytes (43 KB) 2021-05-15T13:50:42.6564173Z ================================================== 2021-05-15T13:50:42.6564709Z downloaded 43 KB 2021-05-15T13:50:42.6564985Z 2021-05-15T13:50:42.6604387Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/yaml_2.2.1.tar.gz' 2021-05-15T13:50:42.9325909Z Content type 'binary/octet-stream' length 92979 bytes (90 KB) 2021-05-15T13:50:42.9399354Z ================================================== 2021-05-15T13:50:42.9399902Z downloaded 90 KB 2021-05-15T13:50:42.9400211Z 2021-05-15T13:50:42.9522127Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/withr_2.4.2.tar.gz' 2021-05-15T13:50:43.2221664Z Content type 'binary/octet-stream' length 95150 bytes (92 KB) 2021-05-15T13:50:43.2301568Z ================================================== 2021-05-15T13:50:43.2302495Z downloaded 92 KB 2021-05-15T13:50:43.2303105Z 2021-05-15T13:50:43.2342570Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/whisker_0.4.tar.gz' 2021-05-15T13:50:43.6177585Z Content type 'application/x-tar' length 28675 bytes (28 KB) 2021-05-15T13:50:43.6186778Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lifecycle_1.0.0.tar.gz' 2021-05-15T13:50:44.6333664Z Content type 'binary/octet-stream' length 83493 bytes (81 KB) 2021-05-15T13:50:44.6401645Z ================================================== 2021-05-15T13:50:44.6402210Z downloaded 81 KB 2021-05-15T13:50:44.6402526Z 2021-05-15T13:50:44.6441723Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gh_1.3.0.tar.gz' 2021-05-15T13:50:44.9125656Z Content type 'binary/octet-stream' length 45853 bytes (44 KB) 2021-05-15T13:50:44.9174645Z ================================================== 2021-05-15T13:50:44.9175145Z downloaded 44 KB 2021-05-15T13:50:44.9175401Z 2021-05-15T13:50:44.9213501Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gert_1.3.0.tar.gz' 2021-05-15T13:50:45.1903136Z Content type 'binary/octet-stream' length 66528 bytes (64 KB) 2021-05-15T13:50:45.1966008Z 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2021-05-15T13:50:45.9165121Z Content type 'application/x-gzip' length 24974 bytes (24 KB) 2021-05-15T13:50:45.9171436Z ================================================== 2021-05-15T13:50:45.9171967Z downloaded 24 KB 2021-05-15T13:50:45.9172260Z 2021-05-15T13:50:45.9196159Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/usethis_2.0.1.tar.gz' 2021-05-15T13:50:46.1994167Z Content type 'binary/octet-stream' length 304209 bytes (297 KB) 2021-05-15T13:50:46.2172942Z ================================================== 2021-05-15T13:50:46.2173973Z downloaded 297 KB 2021-05-15T13:50:46.2174524Z 2021-05-15T13:50:46.2209831Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/memoise_2.0.0.tar.gz' 2021-05-15T13:50:46.4886806Z Content type 'binary/octet-stream' length 17411 bytes (17 KB) 2021-05-15T13:50:46.4888341Z ================================================== 2021-05-15T13:50:46.4889012Z downloaded 17 KB 2021-05-15T13:50:46.4889501Z 2021-05-15T13:50:46.4922282Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/git2r_0.28.0.tar.gz' 2021-05-15T13:50:46.7620628Z Content type 'binary/octet-stream' length 1223574 bytes (1.2 MB) 2021-05-15T13:50:46.7925953Z ================================================== 2021-05-15T13:50:46.7927321Z downloaded 1.2 MB 2021-05-15T13:50:46.7927856Z 2021-05-15T13:50:47.2778192Z * installing *source* package ‘rlang’ ... 2021-05-15T13:50:47.2904620Z ** package ‘rlang’ successfully unpacked and MD5 sums checked 2021-05-15T13:50:47.2905829Z ** using staged installation 2021-05-15T13:50:47.3088635Z ** libs 2021-05-15T13:50:47.3348060Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c capture.c -o capture.o 2021-05-15T13:50:47.4707166Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c export.c -o export.o 2021-05-15T13:50:47.7919441Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c internal.c -o internal.o 2021-05-15T13:50:49.9874573Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c lib.c -o lib.o 2021-05-15T13:50:50.9226164Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-15T13:50:50.9602578Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o version.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:50:51.0101222Z installing to /home/runner/work/_temp/Library/00LOCK-rlang/00new/rlang/libs 2021-05-15T13:50:51.0127682Z ** R 2021-05-15T13:50:51.0568677Z ** inst 2021-05-15T13:50:51.0577106Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:50:54.2657561Z ** help 2021-05-15T13:50:54.9550262Z *** installing help indices 2021-05-15T13:50:55.2355487Z *** copying figures 2021-05-15T13:50:55.2360559Z ** building package indices 2021-05-15T13:50:55.6915393Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:50:55.9267879Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:50:56.1218189Z ** testing if installed package can be loaded from final location 2021-05-15T13:50:56.3803344Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:50:56.3835100Z * DONE (rlang) 2021-05-15T13:50:56.6303113Z * installing *source* package ‘magrittr’ ... 2021-05-15T13:50:56.6328444Z ** package ‘magrittr’ successfully unpacked and MD5 sums checked 2021-05-15T13:50:56.6329666Z ** using staged installation 2021-05-15T13:50:56.6450596Z ** libs 2021-05-15T13:50:56.6497175Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pipe.c -o pipe.o 2021-05-15T13:50:56.7680198Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-15T13:50:56.8193362Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o magrittr.so pipe.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:50:56.8415737Z installing to /home/runner/work/_temp/Library/00LOCK-magrittr/00new/magrittr/libs 2021-05-15T13:50:56.8457113Z ** R 2021-05-15T13:50:56.8467645Z ** inst 2021-05-15T13:50:56.8481516Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:50:57.1258171Z ** help 2021-05-15T13:50:57.1647485Z *** installing help indices 2021-05-15T13:50:57.1932636Z *** copying figures 2021-05-15T13:50:57.1937358Z ** building package indices 2021-05-15T13:50:57.3902753Z ** installing vignettes 2021-05-15T13:50:57.3958707Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:50:57.5679942Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:50:57.5853111Z ** testing if installed package can be loaded from final location 2021-05-15T13:50:57.7557248Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:50:57.7575777Z * DONE (magrittr) 2021-05-15T13:50:57.9730529Z * installing *source* package ‘glue’ ... 2021-05-15T13:50:57.9748134Z ** package ‘glue’ successfully unpacked and MD5 sums checked 2021-05-15T13:50:57.9749314Z ** using staged installation 2021-05-15T13:50:57.9882203Z ** libs 2021-05-15T13:50:57.9927453Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c glue.c -o glue.o 2021-05-15T13:50:58.1158903Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:50:58.1584071Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c trim.c -o trim.o 2021-05-15T13:50:58.2389799Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o glue.so glue.o init.o trim.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:50:58.2607805Z installing to /home/runner/work/_temp/Library/00LOCK-glue/00new/glue/libs 2021-05-15T13:50:58.2620713Z ** R 2021-05-15T13:50:58.2671247Z ** inst 2021-05-15T13:50:58.2681481Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:50:58.7242327Z ** help 2021-05-15T13:50:58.7537259Z *** installing help indices 2021-05-15T13:50:58.7829855Z *** copying figures 2021-05-15T13:50:58.7833065Z ** building package indices 2021-05-15T13:50:58.9753015Z ** installing vignettes 2021-05-15T13:50:58.9812367Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:50:59.1954790Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:50:59.2126853Z ** testing if installed package can be loaded from final location 2021-05-15T13:50:59.4243832Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:50:59.4252464Z * DONE (glue) 2021-05-15T13:50:59.6329048Z * installing *source* package ‘sys’ ... 2021-05-15T13:50:59.6340822Z ** package ‘sys’ successfully unpacked and MD5 sums checked 2021-05-15T13:50:59.6341767Z ** using staged installation 2021-05-15T13:50:59.6528093Z ** libs 2021-05-15T13:50:59.6574478Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c exec.c -o exec.o 2021-05-15T13:50:59.9319949Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:50:59.9757547Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o sys.so exec.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:50:59.9974694Z installing to /home/runner/work/_temp/Library/00LOCK-sys/00new/sys/libs 2021-05-15T13:50:59.9988593Z ** R 2021-05-15T13:51:00.0021662Z ** inst 2021-05-15T13:51:00.0029548Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:51:00.2777796Z ** help 2021-05-15T13:51:00.2904023Z *** installing help indices 2021-05-15T13:51:00.3091775Z ** building package indices 2021-05-15T13:51:00.4965422Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:51:00.6662042Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:51:00.6835500Z ** testing if installed package can be loaded from final location 2021-05-15T13:51:00.8532812Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:51:00.8533835Z * DONE (sys) 2021-05-15T13:51:01.0490731Z * installing *source* package ‘mime’ ... 2021-05-15T13:51:01.0498757Z ** package ‘mime’ successfully unpacked and MD5 sums checked 2021-05-15T13:51:01.0499733Z ** using staged installation 2021-05-15T13:51:01.0625541Z ** libs 2021-05-15T13:51:01.0674279Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:51:01.1114014Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rawmatch.c -o rawmatch.o 2021-05-15T13:51:01.1652048Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o mime.so init.o rawmatch.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:51:01.1792441Z installing to /home/runner/work/_temp/Library/00LOCK-mime/00new/mime/libs 2021-05-15T13:51:01.1806219Z ** R 2021-05-15T13:51:01.1859755Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:51:01.4955524Z ** help 2021-05-15T13:51:01.5167963Z *** installing help indices 2021-05-15T13:51:01.5317408Z ** building package indices 2021-05-15T13:51:01.7162689Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:51:01.8862355Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:51:01.9035084Z ** testing if installed package can be loaded from final location 2021-05-15T13:51:02.0735240Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:51:02.0741175Z * DONE (mime) 2021-05-15T13:51:02.4079493Z * installing *source* package ‘curl’ ... 2021-05-15T13:51:02.4156937Z ** package ‘curl’ successfully unpacked and MD5 sums checked 2021-05-15T13:51:02.4158158Z ** using staged installation 2021-05-15T13:51:02.4308573Z Found pkg-config cflags and libs! 2021-05-15T13:51:02.5125560Z Using PKG_CFLAGS=-I/usr/include/x86_64-linux-gnu 2021-05-15T13:51:02.5126721Z Using PKG_LIBS=-lcurl 2021-05-15T13:51:02.5677422Z ** libs 2021-05-15T13:51:02.5729789Z rm -f curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o 2021-05-15T13:51:02.5757155Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c callbacks.c -o callbacks.o 2021-05-15T13:51:02.6470996Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c curl.c -o curl.o 2021-05-15T13:51:02.7669228Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c download.c -o download.o 2021-05-15T13:51:02.8498898Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c escape.c -o escape.o 2021-05-15T13:51:02.9043029Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fetch.c -o fetch.o 2021-05-15T13:51:03.0028915Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c form.c -o form.o 2021-05-15T13:51:03.0712157Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c getdate.c -o getdate.o 2021-05-15T13:51:03.1230626Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c handle.c -o handle.o 2021-05-15T13:51:03.4381082Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ieproxy.c -o ieproxy.o 2021-05-15T13:51:03.4750660Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:51:03.5294394Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c interrupt.c -o interrupt.o 2021-05-15T13:51:03.5932683Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c multi.c -o multi.o 2021-05-15T13:51:03.7598195Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c nslookup.c -o nslookup.o 2021-05-15T13:51:03.8652093Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c reflist.c -o reflist.o 2021-05-15T13:51:03.9181737Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c split.c -o split.o 2021-05-15T13:51:03.9599370Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ssl.c -o ssl.o 2021-05-15T13:51:04.0050290Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typechecking.c -o typechecking.o 2021-05-15T13:51:04.0588449Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-15T13:51:04.1754589Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-15T13:51:04.2405885Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c winidn.c -o winidn.o 2021-05-15T13:51:04.2593444Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c writer.c -o writer.o 2021-05-15T13:51:04.3079401Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o -lcurl -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:51:04.3382990Z installing to /home/runner/work/_temp/Library/00LOCK-curl/00new/curl/libs 2021-05-15T13:51:04.3397936Z ** R 2021-05-15T13:51:04.3513168Z ** inst 2021-05-15T13:51:04.3545573Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:51:04.8537839Z ** help 2021-05-15T13:51:04.8909449Z *** installing help indices 2021-05-15T13:51:04.9236002Z ** building package indices 2021-05-15T13:51:05.1322999Z ** installing vignettes 2021-05-15T13:51:05.1323817Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:51:05.3175823Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:51:05.3357079Z ** testing if installed package can be loaded from final location 2021-05-15T13:51:05.5211950Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:51:05.5222133Z * DONE (curl) 2021-05-15T13:51:05.8375108Z * installing *source* package ‘jsonlite’ ... 2021-05-15T13:51:05.8426828Z ** package ‘jsonlite’ successfully unpacked and MD5 sums checked 2021-05-15T13:51:05.8428945Z ** using staged installation 2021-05-15T13:51:05.8563703Z ** libs 2021-05-15T13:51:05.8616781Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c base64.c -o base64.o 2021-05-15T13:51:05.9267477Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_array.c -o collapse_array.o 2021-05-15T13:51:05.9877968Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_object.c -o collapse_object.o 2021-05-15T13:51:06.0490358Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_pretty.c -o collapse_pretty.o 2021-05-15T13:51:06.1542904Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c escape_chars.c -o escape_chars.o 2021-05-15T13:51:06.2211572Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c integer64_to_na.c -o integer64_to_na.o 2021-05-15T13:51:06.2679306Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_datelist.c -o is_datelist.o 2021-05-15T13:51:06.3143685Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_recordlist.c -o is_recordlist.o 2021-05-15T13:51:06.3663743Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_scalarlist.c -o is_scalarlist.o 2021-05-15T13:51:06.4159655Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c modp_numtoa.c -o modp_numtoa.o 2021-05-15T13:51:06.5408111Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c null_to_na.c -o null_to_na.o 2021-05-15T13:51:06.6062833Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c num_to_char.c -o num_to_char.o 2021-05-15T13:51:06.6854686Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c parse.c -o parse.o 2021-05-15T13:51:06.7543382Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c prettify.c -o prettify.o 2021-05-15T13:51:06.8207410Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c push_parser.c -o push_parser.o 2021-05-15T13:51:06.8754049Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c r-base64.c -o r-base64.o 2021-05-15T13:51:06.9277024Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c register.c -o register.o 2021-05-15T13:51:06.9706046Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c row_collapse.c -o row_collapse.o 2021-05-15T13:51:07.0349742Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c transpose_list.c -o transpose_list.o 2021-05-15T13:51:07.0844385Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c validate.c -o validate.o 2021-05-15T13:51:07.1314303Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl.c -o yajl/yajl.o 2021-05-15T13:51:07.1898000Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o 2021-05-15T13:51:07.2193561Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_buf.c -o yajl/yajl_buf.o 2021-05-15T13:51:07.2647111Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_encode.c -o yajl/yajl_encode.o 2021-05-15T13:51:07.3575637Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_gen.c -o yajl/yajl_gen.o 2021-05-15T13:51:07.5827619Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_lex.c -o yajl/yajl_lex.o 2021-05-15T13:51:07.8320317Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_parser.c -o yajl/yajl_parser.o 2021-05-15T13:51:07.9928961Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_tree.c -o yajl/yajl_tree.o 2021-05-15T13:51:08.1253864Z ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o 2021-05-15T13:51:08.1446759Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:51:08.1779261Z installing to /home/runner/work/_temp/Library/00LOCK-jsonlite/00new/jsonlite/libs 2021-05-15T13:51:08.1780585Z ** R 2021-05-15T13:51:08.1928187Z ** inst 2021-05-15T13:51:08.1944781Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:51:09.1983409Z in method for ‘asJSON’ with signature ‘"blob"’: no definition for class “blob” 2021-05-15T13:51:09.1985390Z ** help 2021-05-15T13:51:09.2286942Z *** installing help indices 2021-05-15T13:51:09.2551395Z ** building package indices 2021-05-15T13:51:09.4537699Z ** installing vignettes 2021-05-15T13:51:09.4584167Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:51:09.6455001Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:51:09.6672463Z ** testing if installed package can be loaded from final location 2021-05-15T13:51:09.8719974Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:51:09.8721325Z * DONE (jsonlite) 2021-05-15T13:51:10.0668105Z * installing *source* package ‘ini’ ... 2021-05-15T13:51:10.0675019Z ** package ‘ini’ successfully unpacked and MD5 sums checked 2021-05-15T13:51:10.0676149Z ** using staged installation 2021-05-15T13:51:10.0779440Z ** R 2021-05-15T13:51:10.0804324Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:51:10.3118111Z ** help 2021-05-15T13:51:10.3241868Z *** installing help indices 2021-05-15T13:51:10.3462764Z ** building package indices 2021-05-15T13:51:10.5270894Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:51:10.6808688Z ** testing if installed package can be loaded from final location 2021-05-15T13:51:10.8490151Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:51:10.8491306Z * DONE (ini) 2021-05-15T13:51:11.0728971Z * installing *source* package ‘gitcreds’ ... 2021-05-15T13:51:11.0746209Z ** package ‘gitcreds’ successfully unpacked and MD5 sums checked 2021-05-15T13:51:11.0747297Z ** using staged installation 2021-05-15T13:51:11.0852597Z ** R 2021-05-15T13:51:11.0907992Z ** inst 2021-05-15T13:51:11.0918589Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:51:11.5651706Z ** help 2021-05-15T13:51:11.5900518Z *** installing help indices 2021-05-15T13:51:11.6120215Z ** building package indices 2021-05-15T13:51:11.8018319Z ** installing vignettes 2021-05-15T13:51:11.8071110Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:51:11.9848112Z ** testing if installed package can be loaded from final location 2021-05-15T13:51:12.1581054Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:51:12.1588137Z * DONE (gitcreds) 2021-05-15T13:51:12.3922185Z * installing *source* package ‘zip’ ... 2021-05-15T13:51:13.1821132Z ** package ‘zip’ successfully unpacked and MD5 sums checked 2021-05-15T13:51:13.1822198Z gcc -g -O2 miniz.c zip.c unixutils.c tools/cmdzip.c -o tools/cmdzip 2021-05-15T13:51:13.1823567Z ** using staged installation 2021-05-15T13:51:13.1824131Z ** libs 2021-05-15T13:51:15.0172528Z gcc -g -O2 miniz.c zip.c unixutils.c tools/cmdunzip.c -o tools/cmdunzip 2021-05-15T13:51:17.6039948Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:51:17.6458114Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c miniz.c -o miniz.o 2021-05-15T13:51:19.9891597Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rzip.c -o rzip.o 2021-05-15T13:51:20.0803412Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c zip.c -o zip.o 2021-05-15T13:51:20.2050262Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unixutils.c -o unixutils.o 2021-05-15T13:51:20.2675608Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o zip.so init.o miniz.o rzip.o zip.o unixutils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:51:20.2938842Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-zip/00new/zip 2021-05-15T13:51:20.2987868Z ** R 2021-05-15T13:51:20.3026905Z ** inst 2021-05-15T13:51:20.3037353Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:51:20.6209215Z ** help 2021-05-15T13:51:20.6410671Z *** installing help indices 2021-05-15T13:51:20.6642527Z ** building package indices 2021-05-15T13:51:20.8554982Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:51:21.0316693Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:51:21.0493428Z ** testing if installed package can be loaded from final location 2021-05-15T13:51:21.2244606Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:51:21.2269978Z * DONE (zip) 2021-05-15T13:51:21.5068342Z * installing *source* package ‘rstudioapi’ ... 2021-05-15T13:51:21.5106525Z ** package ‘rstudioapi’ successfully unpacked and MD5 sums checked 2021-05-15T13:51:21.5107740Z ** using staged installation 2021-05-15T13:51:21.5225698Z ** R 2021-05-15T13:51:21.5322648Z ** inst 2021-05-15T13:51:21.5339987Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:51:22.0297593Z ** help 2021-05-15T13:51:22.1890127Z *** installing help indices 2021-05-15T13:51:22.2970770Z *** copying figures 2021-05-15T13:51:22.2974583Z ** building package indices 2021-05-15T13:51:22.5783141Z ** installing vignettes 2021-05-15T13:51:22.5861604Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:51:22.7552290Z ** testing if installed package can be loaded from final location 2021-05-15T13:51:22.9281812Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:51:22.9292168Z * DONE (rstudioapi) 2021-05-15T13:51:23.1450460Z * installing *source* package ‘fastmap’ ... 2021-05-15T13:51:23.1466018Z ** package ‘fastmap’ successfully unpacked and MD5 sums checked 2021-05-15T13:51:23.1467204Z ** using staged installation 2021-05-15T13:51:23.1636260Z ** libs 2021-05-15T13:51:23.1700606Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilib/ -I/usr/local/include -DR_NO_REMAP -fpic -g -O2 -c fastmap.cpp -o fastmap.o 2021-05-15T13:51:26.7258771Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilib/ -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:51:26.7662831Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fastmap.so fastmap.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:51:26.8298386Z installing to /home/runner/work/_temp/Library/00LOCK-fastmap/00new/fastmap/libs 2021-05-15T13:51:26.8314300Z ** R 2021-05-15T13:51:26.8361196Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:51:27.2457152Z ** help 2021-05-15T13:51:27.2617917Z *** installing help indices 2021-05-15T13:51:27.2780034Z ** building package indices 2021-05-15T13:51:27.4493027Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:51:27.6257133Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:51:27.6436726Z ** testing if installed package can be loaded from final location 2021-05-15T13:51:27.8200350Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:51:27.8201635Z * DONE (fastmap) 2021-05-15T13:51:28.0579093Z * installing *source* package ‘yaml’ ... 2021-05-15T13:51:28.0604497Z ** package ‘yaml’ successfully unpacked and MD5 sums checked 2021-05-15T13:51:28.0605805Z ** using staged installation 2021-05-15T13:51:28.0703377Z ** libs 2021-05-15T13:51:28.0756518Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api.c -o api.o 2021-05-15T13:51:28.3924757Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dumper.c -o dumper.o 2021-05-15T13:51:28.4888823Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c emitter.c -o emitter.o 2021-05-15T13:51:29.2797283Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c implicit.c -o implicit.o 2021-05-15T13:51:29.4349500Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c loader.c -o loader.o 2021-05-15T13:51:29.5459603Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c parser.c -o parser.o 2021-05-15T13:51:29.8518963Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_emit.c -o r_emit.o 2021-05-15T13:51:30.1008134Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_ext.c -o r_ext.o 2021-05-15T13:51:30.2017961Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_parse.c -o r_parse.o 2021-05-15T13:51:30.5979185Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reader.c -o reader.o 2021-05-15T13:51:30.7034648Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c scanner.c -o scanner.o 2021-05-15T13:51:31.9650496Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c writer.c -o writer.o 2021-05-15T13:51:32.0232452Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o yaml.so api.o dumper.o emitter.o implicit.o loader.o parser.o r_emit.o r_ext.o r_parse.o reader.o scanner.o writer.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:51:32.0532759Z installing to /home/runner/work/_temp/Library/00LOCK-yaml/00new/yaml/libs 2021-05-15T13:51:32.0553015Z ** R 2021-05-15T13:51:32.0581271Z ** inst 2021-05-15T13:51:32.0594430Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:51:32.2983313Z ** help 2021-05-15T13:51:32.3180036Z *** installing help indices 2021-05-15T13:51:32.3419803Z ** building package indices 2021-05-15T13:51:32.5328021Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:51:32.7069361Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:51:32.7251733Z ** testing if installed package can be loaded from final location 2021-05-15T13:51:32.8974954Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:51:32.8981241Z * DONE (yaml) 2021-05-15T13:51:33.1534959Z * installing *source* package ‘withr’ ... 2021-05-15T13:51:33.1560329Z ** package ‘withr’ successfully unpacked and MD5 sums checked 2021-05-15T13:51:33.1561475Z ** using staged installation 2021-05-15T13:51:33.1711995Z ** R 2021-05-15T13:51:33.1794159Z ** inst 2021-05-15T13:51:33.1803263Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:51:33.7999667Z ** help 2021-05-15T13:51:33.8765157Z *** installing help indices 2021-05-15T13:51:33.9319718Z *** copying figures 2021-05-15T13:51:33.9321854Z ** building package indices 2021-05-15T13:51:34.1707652Z ** installing vignettes 2021-05-15T13:51:34.1773586Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:51:34.3498514Z ** testing if installed package can be loaded from final location 2021-05-15T13:51:34.5300726Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:51:34.5310122Z * DONE (withr) 2021-05-15T13:51:34.7601748Z * installing *source* package ‘whisker’ ... 2021-05-15T13:51:34.7618177Z ** package ‘whisker’ successfully unpacked and MD5 sums checked 2021-05-15T13:51:34.7619381Z ** using staged installation 2021-05-15T13:51:34.7711164Z ** R 2021-05-15T13:51:34.7750989Z ** inst 2021-05-15T13:51:34.7769440Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:51:35.1669414Z ** help 2021-05-15T13:51:35.1883094Z *** installing help indices 2021-05-15T13:51:35.2104464Z ** building package indices 2021-05-15T13:51:35.4053476Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:51:35.5608669Z ** testing if installed package can be loaded from final location 2021-05-15T13:51:35.7328504Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:51:35.7336414Z * DONE (whisker) 2021-05-15T13:51:35.9454735Z * installing *source* package ‘rappdirs’ ... 2021-05-15T13:51:35.9466439Z ** package ‘rappdirs’ successfully unpacked and MD5 sums checked 2021-05-15T13:51:35.9467410Z ** using staged installation 2021-05-15T13:51:35.9689744Z ** libs 2021-05-15T13:51:35.9734255Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:51:36.0185101Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c win-path.c -o win-path.o 2021-05-15T13:51:36.0619068Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rappdirs.so init.o win-path.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:51:36.0767208Z installing to /home/runner/work/_temp/Library/00LOCK-rappdirs/00new/rappdirs/libs 2021-05-15T13:51:36.0779548Z ** R 2021-05-15T13:51:36.0819103Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:51:36.3710902Z ** help 2021-05-15T13:51:36.3940030Z *** installing help indices 2021-05-15T13:51:36.4127775Z ** building package indices 2021-05-15T13:51:36.6056206Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:51:36.7638669Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:51:36.7815261Z ** testing if installed package can be loaded from final location 2021-05-15T13:51:36.9364902Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:51:36.9371004Z * DONE (rappdirs) 2021-05-15T13:51:37.6878207Z * installing *source* package ‘fs’ ... 2021-05-15T13:51:37.6879614Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c id.cc -o id.o 2021-05-15T13:51:37.6884738Z ** package ‘fs’ successfully unpacked and MD5 sums checked 2021-05-15T13:51:37.6885530Z ** using staged installation 2021-05-15T13:51:37.6886006Z ** libs 2021-05-15T13:51:37.9916178Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c file.cc -o file.o 2021-05-15T13:51:38.4037889Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c path.cc -o path.o 2021-05-15T13:51:38.7443719Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c fs.cc -o fs.o 2021-05-15T13:51:38.8223921Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c link.cc -o link.o 2021-05-15T13:51:39.1082077Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c utils.cc -o utils.o 2021-05-15T13:51:39.3970892Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c init.cc -o init.o 2021-05-15T13:51:39.4841287Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c dir.cc -o dir.o 2021-05-15T13:51:39.8957086Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c getmode.cc -o getmode.o 2021-05-15T13:51:40.1670438Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c error.cc -o error.o 2021-05-15T13:51:40.2641405Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c unix/getmode.cc -o unix/getmode.o 2021-05-15T13:51:40.5575653Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/setmode.c -o bsd/setmode.o 2021-05-15T13:51:40.6798927Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/strmode.c -o bsd/strmode.o 2021-05-15T13:51:40.7213429Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/reallocarray.c -o bsd/reallocarray.o 2021-05-15T13:51:40.7525072Z (cd libuv-1.38.1 \ 2021-05-15T13:51:40.7526762Z && CC="gcc" CFLAGS="-g -O2 -I/usr/local/include -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" LDFLAGS="-L/usr/local/lib" ./configure --quiet) 2021-05-15T13:51:45.3627715Z make --directory=libuv-1.38.1 \ 2021-05-15T13:51:45.3628720Z HAVE_DTRACE=0 2021-05-15T13:51:45.3726866Z make[1]: Entering directory '/tmp/RtmpAPmw5O/R.INSTALL79122fa26fbf/fs/src/libuv-1.38.1' 2021-05-15T13:51:45.3821144Z CC src/libuv_la-fs-poll.lo 2021-05-15T13:51:45.9810583Z CC src/libuv_la-idna.lo 2021-05-15T13:51:46.5908519Z CC src/libuv_la-inet.lo 2021-05-15T13:51:47.2168582Z CC src/libuv_la-random.lo 2021-05-15T13:51:47.7243724Z CC src/libuv_la-strscpy.lo 2021-05-15T13:51:48.1919889Z CC src/libuv_la-threadpool.lo 2021-05-15T13:51:48.8317881Z CC src/libuv_la-timer.lo 2021-05-15T13:51:49.4375011Z CC src/libuv_la-uv-data-getter-setters.lo 2021-05-15T13:51:49.9507079Z CC src/libuv_la-uv-common.lo 2021-05-15T13:51:51.0372323Z CC src/libuv_la-version.lo 2021-05-15T13:51:51.5086660Z CC src/unix/libuv_la-async.lo 2021-05-15T13:51:52.0946197Z CC src/unix/libuv_la-core.lo 2021-05-15T13:51:53.2344675Z CC src/unix/libuv_la-dl.lo 2021-05-15T13:51:53.7355956Z CC src/unix/libuv_la-fs.lo 2021-05-15T13:51:55.1667445Z CC src/unix/libuv_la-getaddrinfo.lo 2021-05-15T13:51:55.7164822Z CC src/unix/libuv_la-getnameinfo.lo 2021-05-15T13:51:56.2153646Z CC src/unix/libuv_la-loop-watcher.lo 2021-05-15T13:51:56.8032444Z CC src/unix/libuv_la-loop.lo 2021-05-15T13:51:57.3643669Z CC src/unix/libuv_la-pipe.lo 2021-05-15T13:51:58.6924227Z CC src/unix/libuv_la-poll.lo 2021-05-15T13:51:58.6932473Z CC src/unix/libuv_la-process.lo 2021-05-15T13:51:59.2740898Z CC src/unix/libuv_la-random-devurandom.lo 2021-05-15T13:51:59.7908102Z CC src/unix/libuv_la-signal.lo 2021-05-15T13:52:00.6580354Z CC src/unix/libuv_la-stream.lo 2021-05-15T13:52:01.6717073Z CC src/unix/libuv_la-tcp.lo 2021-05-15T13:52:02.3124534Z CC src/unix/libuv_la-thread.lo 2021-05-15T13:52:03.0144022Z CC src/unix/libuv_la-tty.lo 2021-05-15T13:52:03.6046348Z CC src/unix/libuv_la-udp.lo 2021-05-15T13:52:04.6089604Z CC src/unix/libuv_la-linux-core.lo 2021-05-15T13:52:05.6151123Z CC src/unix/libuv_la-linux-inotify.lo 2021-05-15T13:52:06.4163840Z CC src/unix/libuv_la-linux-syscalls.lo 2021-05-15T13:52:06.8805168Z CC src/unix/libuv_la-procfs-exepath.lo 2021-05-15T13:52:07.3799010Z CC src/unix/libuv_la-proctitle.lo 2021-05-15T13:52:07.9083998Z CC src/unix/libuv_la-random-getrandom.lo 2021-05-15T13:52:08.3974366Z CC src/unix/libuv_la-random-sysctl-linux.lo 2021-05-15T13:52:08.9083992Z CCLD libuv.la 2021-05-15T13:52:09.1066084Z ar: `u' modifier ignored since `D' is the default (see `U') 2021-05-15T13:52:09.1482169Z make[1]: Leaving directory '/tmp/RtmpAPmw5O/R.INSTALL79122fa26fbf/fs/src/libuv-1.38.1' 2021-05-15T13:52:09.1499334Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fs.so id.o file.o path.o fs.o link.o utils.o init.o dir.o getmode.o error.o unix/getmode.o bsd/setmode.o bsd/strmode.o bsd/reallocarray.o ./libuv-1.38.1/.libs/libuv.a -pthread -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:52:09.2343889Z installing to /home/runner/work/_temp/Library/00LOCK-fs/00new/fs/libs 2021-05-15T13:52:09.2373411Z ** R 2021-05-15T13:52:09.2471179Z ** inst 2021-05-15T13:52:09.2481094Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:52:10.2107580Z ** help 2021-05-15T13:52:10.2777837Z *** installing help indices 2021-05-15T13:52:10.3264955Z ** building package indices 2021-05-15T13:52:10.5457656Z ** installing vignettes 2021-05-15T13:52:10.5565758Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:52:10.7780126Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:52:10.7964432Z ** testing if installed package can be loaded from final location 2021-05-15T13:52:11.0247206Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:52:11.0259396Z * DONE (fs) 2021-05-15T13:52:11.2517263Z * installing *source* package ‘clipr’ ... 2021-05-15T13:52:11.2530079Z ** package ‘clipr’ successfully unpacked and MD5 sums checked 2021-05-15T13:52:11.2532302Z ** using staged installation 2021-05-15T13:52:11.2740359Z ** R 2021-05-15T13:52:11.2779622Z ** inst 2021-05-15T13:52:11.2790330Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:52:11.5617771Z ** help 2021-05-15T13:52:11.5801877Z *** installing help indices 2021-05-15T13:52:11.6004801Z ** building package indices 2021-05-15T13:52:11.7730816Z ** installing vignettes 2021-05-15T13:52:11.7732203Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:52:11.9419702Z ** testing if installed package can be loaded from final location 2021-05-15T13:52:12.1130272Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:52:12.1131548Z * DONE (clipr) 2021-05-15T13:52:12.8148425Z * installing *source* package ‘git2r’ ... 2021-05-15T13:52:12.8380653Z ** package ‘git2r’ successfully unpacked and MD5 sums checked 2021-05-15T13:52:12.8381932Z ** using staged installation 2021-05-15T13:52:13.0078627Z checking build system type... x86_64-unknown-linux-gnu 2021-05-15T13:52:13.0080194Z checking host system type... x86_64-unknown-linux-gnu 2021-05-15T13:52:13.0086644Z checking for gcc... gcc 2021-05-15T13:52:13.0645727Z checking whether the C compiler works... yes 2021-05-15T13:52:13.0647041Z checking for C compiler default output file name... a.out 2021-05-15T13:52:13.0997421Z checking for suffix of executables... 2021-05-15T13:52:13.1382172Z checking whether we are cross compiling... no 2021-05-15T13:52:13.1596419Z checking for suffix of object files... o 2021-05-15T13:52:13.1791958Z checking whether we are using the GNU C compiler... yes 2021-05-15T13:52:13.1986486Z checking whether gcc accepts -g... yes 2021-05-15T13:52:13.2322799Z checking for gcc option to accept ISO C89... none needed 2021-05-15T13:52:13.2329949Z checking for pkg-config... /usr/bin/pkg-config 2021-05-15T13:52:13.2343940Z checking pkg-config is at least version 0.9.0... yes 2021-05-15T13:52:13.2476862Z Found pkg-config cflags and libs! 2021-05-15T13:52:13.3351830Z checking whether the libgit2 version will work in git2r... yes 2021-05-15T13:52:13.4526406Z checking whether the libgit2 function git_buf_dispose is available... yes 2021-05-15T13:52:13.5688510Z checking whether the libgit2 constant GIT_OBJECT_ANY is available... yes 2021-05-15T13:52:13.6843618Z checking whether the libgit2 function git_error_last is available... yes 2021-05-15T13:52:13.7834787Z checking whether the libgit2 function git_oid_is_zero is available... no 2021-05-15T13:52:13.7836246Z ----- Results of the git2r package configure ----- 2021-05-15T13:52:13.7836625Z 2021-05-15T13:52:13.7837479Z PKG_CFLAGS: -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR 2021-05-15T13:52:13.7838187Z PKG_LIBS: -lgit2 2021-05-15T13:52:13.7838442Z 2021-05-15T13:52:13.7839050Z -------------------------------------------------- 2021-05-15T13:52:13.8035651Z configure: creating ./config.status 2021-05-15T13:52:13.8726820Z config.status: creating src/Makevars 2021-05-15T13:52:13.9267534Z ** libs 2021-05-15T13:52:13.9324973Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r.c -o git2r.o 2021-05-15T13:52:13.9955712Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_S3.c -o git2r_S3.o 2021-05-15T13:52:14.0437584Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_arg.c -o git2r_arg.o 2021-05-15T13:52:14.1918932Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_blame.c -o git2r_blame.o 2021-05-15T13:52:14.2778867Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_blob.c -o git2r_blob.o 2021-05-15T13:52:14.3919602Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_branch.c -o git2r_branch.o 2021-05-15T13:52:14.6065569Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_checkout.c -o git2r_checkout.o 2021-05-15T13:52:14.6939601Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_clone.c -o git2r_clone.o 2021-05-15T13:52:14.7787629Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_commit.c -o git2r_commit.o 2021-05-15T13:52:14.9215357Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_config.c -o git2r_config.o 2021-05-15T13:52:15.0712492Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_cred.c -o git2r_cred.o 2021-05-15T13:52:15.1573279Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_diff.c -o git2r_diff.o 2021-05-15T13:52:15.3919849Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_error.c -o git2r_error.o 2021-05-15T13:52:15.4530921Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_graph.c -o git2r_graph.o 2021-05-15T13:52:15.5313839Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_index.c -o git2r_index.o 2021-05-15T13:52:15.6117748Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_libgit2.c -o git2r_libgit2.o 2021-05-15T13:52:15.6870494Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_merge.c -o git2r_merge.o 2021-05-15T13:52:15.8531584Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_note.c -o git2r_note.o 2021-05-15T13:52:15.9740324Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_object.c -o git2r_object.o 2021-05-15T13:52:16.0509990Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_odb.c -o git2r_odb.o 2021-05-15T13:52:16.2026705Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_oid.c -o git2r_oid.o 2021-05-15T13:52:16.2635247Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_push.c -o git2r_push.o 2021-05-15T13:52:16.3408470Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reference.c -o git2r_reference.o 2021-05-15T13:52:16.4299010Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reflog.c -o git2r_reflog.o 2021-05-15T13:52:16.5110248Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_remote.c -o git2r_remote.o 2021-05-15T13:52:16.6756911Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_repository.c -o git2r_repository.o 2021-05-15T13:52:16.8216481Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reset.c -o git2r_reset.o 2021-05-15T13:52:16.8984989Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_revparse.c -o git2r_revparse.o 2021-05-15T13:52:16.9751885Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_revwalk.c -o git2r_revwalk.o 2021-05-15T13:52:17.1421979Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_signature.c -o git2r_signature.o 2021-05-15T13:52:17.2185161Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_stash.c -o git2r_stash.o 2021-05-15T13:52:17.3280089Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_status.c -o git2r_status.o 2021-05-15T13:52:17.4769005Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_tag.c -o git2r_tag.o 2021-05-15T13:52:17.5961852Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_transfer.c -o git2r_transfer.o 2021-05-15T13:52:17.6577574Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_tree.c -o git2r_tree.o 2021-05-15T13:52:17.7652113Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o git2r.so git2r.o git2r_S3.o git2r_arg.o git2r_blame.o git2r_blob.o git2r_branch.o git2r_checkout.o git2r_clone.o git2r_commit.o git2r_config.o git2r_cred.o git2r_diff.o git2r_error.o git2r_graph.o git2r_index.o git2r_libgit2.o git2r_merge.o git2r_note.o git2r_object.o git2r_odb.o git2r_oid.o git2r_push.o git2r_reference.o git2r_reflog.o git2r_remote.o git2r_repository.o git2r_reset.o git2r_revparse.o git2r_revwalk.o git2r_signature.o git2r_stash.o git2r_status.o git2r_tag.o git2r_transfer.o git2r_tree.o -lgit2 -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:52:17.8059591Z installing to /home/runner/work/_temp/Library/00LOCK-git2r/00new/git2r/libs 2021-05-15T13:52:17.8061008Z ** R 2021-05-15T13:52:17.8242605Z ** inst 2021-05-15T13:52:17.8251260Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:52:19.1973232Z ** help 2021-05-15T13:52:19.1981992Z *** installing help indices 2021-05-15T13:52:19.1983077Z ** building package indices 2021-05-15T13:52:19.4652561Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:52:19.6709933Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:52:19.6890074Z ** testing if installed package can be loaded from final location 2021-05-15T13:52:19.8814054Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:52:19.8826168Z * DONE (git2r) 2021-05-15T13:52:20.0967013Z * installing *source* package ‘askpass’ ... 2021-05-15T13:52:20.0975431Z ** package ‘askpass’ successfully unpacked and MD5 sums checked 2021-05-15T13:52:20.0976525Z ** using staged installation 2021-05-15T13:52:20.1108454Z ** libs 2021-05-15T13:52:20.1157857Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c askpass.c -o askpass.o 2021-05-15T13:52:20.1652734Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o askpass.so askpass.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:52:20.1864946Z installing to /home/runner/work/_temp/Library/00LOCK-askpass/00new/askpass/libs 2021-05-15T13:52:20.1881086Z ** R 2021-05-15T13:52:20.1913938Z ** inst 2021-05-15T13:52:20.1921948Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:52:20.4378067Z ** help 2021-05-15T13:52:20.4527638Z *** installing help indices 2021-05-15T13:52:20.4669494Z ** building package indices 2021-05-15T13:52:20.6478332Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:52:20.8186282Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:52:20.8358563Z ** testing if installed package can be loaded from final location 2021-05-15T13:52:21.0023224Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:52:21.0028746Z * DONE (askpass) 2021-05-15T13:52:21.3282521Z * installing *source* package ‘cli’ ... 2021-05-15T13:52:21.3338561Z ** package ‘cli’ successfully unpacked and MD5 sums checked 2021-05-15T13:52:21.3340594Z ** using staged installation 2021-05-15T13:52:21.3522271Z ** R 2021-05-15T13:52:21.3778620Z ** inst 2021-05-15T13:52:21.3790650Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:52:23.7457547Z ** help 2021-05-15T13:52:23.9314717Z *** installing help indices 2021-05-15T13:52:24.0556891Z *** copying figures 2021-05-15T13:52:24.0558344Z ** building package indices 2021-05-15T13:52:24.3480754Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:52:24.5588993Z ** testing if installed package can be loaded from final location 2021-05-15T13:52:24.8177851Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:52:24.8206926Z * DONE (cli) 2021-05-15T13:52:25.1320147Z * installing *source* package ‘purrr’ ... 2021-05-15T13:52:25.1369473Z ** package ‘purrr’ successfully unpacked and MD5 sums checked 2021-05-15T13:52:25.1370672Z ** using staged installation 2021-05-15T13:52:25.1514893Z ** libs 2021-05-15T13:52:25.1564867Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c backports.c -o backports.o 2021-05-15T13:52:25.1935111Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-05-15T13:52:25.2805535Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c conditions.c -o conditions.o 2021-05-15T13:52:25.3661561Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c flatten.c -o flatten.o 2021-05-15T13:52:25.4720269Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:52:25.5151520Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c map.c -o map.o 2021-05-15T13:52:25.6287773Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pluck.c -o pluck.o 2021-05-15T13:52:25.7656469Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c transpose.c -o transpose.o 2021-05-15T13:52:25.8646986Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-15T13:52:25.9181627Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o purrr.so backports.o coerce.o conditions.o flatten.o init.o map.o pluck.o transpose.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:52:25.9458658Z installing to /home/runner/work/_temp/Library/00LOCK-purrr/00new/purrr/libs 2021-05-15T13:52:25.9460017Z ** R 2021-05-15T13:52:25.9605429Z ** inst 2021-05-15T13:52:25.9615137Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:52:27.1479361Z ** help 2021-05-15T13:52:27.3113929Z *** installing help indices 2021-05-15T13:52:27.4075387Z *** copying figures 2021-05-15T13:52:27.4080111Z ** building package indices 2021-05-15T13:52:27.6806140Z ** installing vignettes 2021-05-15T13:52:27.6888511Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:52:27.8878980Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:52:27.9055194Z ** testing if installed package can be loaded from final location 2021-05-15T13:52:28.1240646Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:52:28.1241950Z * DONE (purrr) 2021-05-15T13:52:28.3763135Z * installing *source* package ‘lifecycle’ ... 2021-05-15T13:52:28.3788663Z ** package ‘lifecycle’ successfully unpacked and MD5 sums checked 2021-05-15T13:52:28.3789665Z ** using staged installation 2021-05-15T13:52:28.3930895Z ** R 2021-05-15T13:52:28.3976881Z ** inst 2021-05-15T13:52:28.3989075Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:52:28.8017633Z ** help 2021-05-15T13:52:28.8301429Z *** installing help indices 2021-05-15T13:52:28.8538419Z *** copying figures 2021-05-15T13:52:28.8543585Z ** building package indices 2021-05-15T13:52:29.0457180Z ** installing vignettes 2021-05-15T13:52:29.0511747Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:52:29.2523220Z ** testing if installed package can be loaded from final location 2021-05-15T13:52:29.4411560Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:52:29.4421060Z * DONE (lifecycle) 2021-05-15T13:52:29.6515517Z * installing *source* package ‘cachem’ ... 2021-05-15T13:52:29.6527639Z ** package ‘cachem’ successfully unpacked and MD5 sums checked 2021-05-15T13:52:29.6529760Z ** using staged installation 2021-05-15T13:52:29.6661031Z ** libs 2021-05-15T13:52:29.6711942Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cache.c -o cache.o 2021-05-15T13:52:29.7219186Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:52:29.7665612Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o cachem.so cache.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:52:29.7873507Z installing to /home/runner/work/_temp/Library/00LOCK-cachem/00new/cachem/libs 2021-05-15T13:52:29.7888413Z ** R 2021-05-15T13:52:29.8020054Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:52:30.3230235Z ** help 2021-05-15T13:52:30.3456359Z *** installing help indices 2021-05-15T13:52:30.3651859Z ** building package indices 2021-05-15T13:52:30.5589028Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:52:30.7559713Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:52:30.7738497Z ** testing if installed package can be loaded from final location 2021-05-15T13:52:30.9772341Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:52:30.9773625Z * DONE (cachem) 2021-05-15T13:52:31.4219710Z * installing *source* package ‘openssl’ ... 2021-05-15T13:52:31.4344147Z ** package ‘openssl’ successfully unpacked and MD5 sums checked 2021-05-15T13:52:31.4346632Z ** using staged installation 2021-05-15T13:52:31.4480522Z Found pkg-config cflags and libs! 2021-05-15T13:52:31.5303547Z Using PKG_CFLAGS= 2021-05-15T13:52:31.8668867Z Using PKG_LIBS=-l:libssl.so.1.1 -l:libcrypto.so.1.1 2021-05-15T13:52:31.8827407Z ** libs 2021-05-15T13:52:31.8886647Z rm -f aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o openssl.so bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o 2021-05-15T13:52:31.8914015Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o 2021-05-15T13:52:31.9743123Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-15T13:52:32.0523089Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bignum.c -o bignum.o 2021-05-15T13:52:32.1527340Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cert.c -o cert.o 2021-05-15T13:52:32.3099880Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c compatibility.c -o compatibility.o 2021-05-15T13:52:32.3752089Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffie.c -o diffie.o 2021-05-15T13:52:32.4702981Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c envelope.c -o envelope.o 2021-05-15T13:52:32.5870417Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error.c -o error.o 2021-05-15T13:52:32.6413249Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c hash.c -o hash.o 2021-05-15T13:52:32.7377683Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c info.c -o info.o 2021-05-15T13:52:32.8027854Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keygen.c -o keygen.o 2021-05-15T13:52:32.9045295Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keys.c -o keys.o 2021-05-15T13:52:33.0339087Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c onload.c -o onload.o 2021-05-15T13:52:33.1229259Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c openssh.c -o openssh.o 2021-05-15T13:52:33.3066563Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c password.c -o password.o 2021-05-15T13:52:33.3604220Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pbkdf.c -o pbkdf.o 2021-05-15T13:52:33.4036128Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pem.c -o pem.o 2021-05-15T13:52:33.5324544Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs12.c -o pkcs12.o 2021-05-15T13:52:33.6741489Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs7.c -o pkcs7.o 2021-05-15T13:52:33.7985081Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rand.c -o rand.o 2021-05-15T13:52:33.8452605Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rsa.c -o rsa.o 2021-05-15T13:52:33.9439463Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signing.c -o signing.o 2021-05-15T13:52:34.0632074Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c ssl.c -o ssl.o 2021-05-15T13:52:34.2068442Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stream.c -o stream.o 2021-05-15T13:52:34.3234107Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write.c -o write.o 2021-05-15T13:52:34.4507762Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c x25519.c -o x25519.o 2021-05-15T13:52:34.5741885Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bcrypt/bcrypt_pbkdf.c -o bcrypt/bcrypt_pbkdf.o 2021-05-15T13:52:34.6428999Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bcrypt/blowfish.c -o bcrypt/blowfish.o 2021-05-15T13:52:34.8170265Z ar rcs bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o 2021-05-15T13:52:34.8228422Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o openssl.so aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o -Lbcrypt -lstatbcrypt -l:libssl.so.1.1 -l:libcrypto.so.1.1 -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:52:34.8819505Z installing to /home/runner/work/_temp/Library/00LOCK-openssl/00new/openssl/libs 2021-05-15T13:52:34.8820986Z ** R 2021-05-15T13:52:34.8911772Z ** inst 2021-05-15T13:52:34.8962677Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:52:35.8263748Z ** help 2021-05-15T13:52:35.8788438Z *** installing help indices 2021-05-15T13:52:35.9162018Z ** building package indices 2021-05-15T13:52:36.1330851Z ** installing vignettes 2021-05-15T13:52:36.1478933Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:52:36.3375874Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:52:36.3549723Z ** testing if installed package can be loaded from final location 2021-05-15T13:52:36.5508918Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:52:36.5522770Z * DONE (openssl) 2021-05-15T13:52:36.7693055Z * installing *source* package ‘memoise’ ... 2021-05-15T13:52:36.7708324Z ** package ‘memoise’ successfully unpacked and MD5 sums checked 2021-05-15T13:52:36.7712171Z ** using staged installation 2021-05-15T13:52:36.7864187Z ** R 2021-05-15T13:52:36.7971885Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:52:37.1937623Z ** help 2021-05-15T13:52:37.2178231Z *** installing help indices 2021-05-15T13:52:37.2417562Z ** building package indices 2021-05-15T13:52:37.4391701Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:52:37.6340355Z ** testing if installed package can be loaded from final location 2021-05-15T13:52:37.8309891Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:52:37.8316377Z * DONE (memoise) 2021-05-15T13:52:38.1426043Z * installing *source* package ‘httr’ ... 2021-05-15T13:52:38.1474008Z ** package ‘httr’ successfully unpacked and MD5 sums checked 2021-05-15T13:52:38.1475194Z ** using staged installation 2021-05-15T13:52:38.1627717Z ** R 2021-05-15T13:52:38.1795553Z ** demo 2021-05-15T13:52:38.1805694Z ** inst 2021-05-15T13:52:38.1819678Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:52:40.6816983Z ** help 2021-05-15T13:52:40.8364745Z *** installing help indices 2021-05-15T13:52:40.9420233Z ** building package indices 2021-05-15T13:52:41.2204254Z ** installing vignettes 2021-05-15T13:52:41.2272912Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:52:41.4174703Z ** testing if installed package can be loaded from final location 2021-05-15T13:52:41.6468439Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:52:41.6495970Z * DONE (httr) 2021-05-15T13:52:41.8764983Z * installing *source* package ‘credentials’ ... 2021-05-15T13:52:41.8781748Z ** package ‘credentials’ successfully unpacked and MD5 sums checked 2021-05-15T13:52:41.8782963Z ** using staged installation 2021-05-15T13:52:41.8912128Z ** R 2021-05-15T13:52:41.8953972Z ** inst 2021-05-15T13:52:41.8964855Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:52:42.3177646Z ** help 2021-05-15T13:52:42.3328106Z *** installing help indices 2021-05-15T13:52:42.3524985Z ** building package indices 2021-05-15T13:52:42.5371086Z ** installing vignettes 2021-05-15T13:52:42.5427990Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:52:42.8486860Z ** testing if installed package can be loaded from final location 2021-05-15T13:52:43.0784045Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:52:43.0791210Z * DONE (credentials) 2021-05-15T13:52:43.3101327Z * installing *source* package ‘gh’ ... 2021-05-15T13:52:43.3118965Z ** package ‘gh’ successfully unpacked and MD5 sums checked 2021-05-15T13:52:43.3119750Z ** using staged installation 2021-05-15T13:52:43.3261411Z ** R 2021-05-15T13:52:43.3339607Z ** inst 2021-05-15T13:52:43.3348359Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:52:44.3186405Z ** help 2021-05-15T13:52:44.3473157Z *** installing help indices 2021-05-15T13:52:44.3763678Z ** building package indices 2021-05-15T13:52:44.5653811Z ** installing vignettes 2021-05-15T13:52:44.5712274Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:52:44.8094582Z ** testing if installed package can be loaded from final location 2021-05-15T13:52:45.0572449Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:52:45.0584488Z * DONE (gh) 2021-05-15T13:52:45.3126907Z * installing *source* package ‘gert’ ... 2021-05-15T13:52:45.3151943Z ** package ‘gert’ successfully unpacked and MD5 sums checked 2021-05-15T13:52:45.3153131Z ** using staged installation 2021-05-15T13:52:45.3245389Z Found pkg-config cflags and libs! 2021-05-15T13:52:45.4069428Z Using PKG_CFLAGS= 2021-05-15T13:52:45.4070841Z Using PKG_LIBS=-lgit2 2021-05-15T13:52:45.4436901Z Configuration OK! 2021-05-15T13:52:45.4590956Z ** libs 2021-05-15T13:52:45.4642437Z rm -f gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o 2021-05-15T13:52:45.4673200Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c branch.c -o branch.o 2021-05-15T13:52:45.6675080Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c clone.c -o clone.o 2021-05-15T13:52:45.8839535Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c commit.c -o commit.o 2021-05-15T13:52:46.0954673Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c config.c -o config.o 2021-05-15T13:52:46.1784275Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c conflicts.c -o conflicts.o 2021-05-15T13:52:46.2500173Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c files.c -o files.o 2021-05-15T13:52:46.3896330Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:52:46.4495933Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c merge.c -o merge.o 2021-05-15T13:52:46.5481403Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rebase.c -o rebase.o 2021-05-15T13:52:46.6543178Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c stash.c -o stash.o 2021-05-15T13:52:46.7364540Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c submodules.c -o submodules.o 2021-05-15T13:52:46.8446889Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c tag.c -o tag.o 2021-05-15T13:52:46.9247135Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-15T13:52:47.0411367Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-15T13:52:47.1138871Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o -lgit2 -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:52:47.1474797Z installing to /home/runner/work/_temp/Library/00LOCK-gert/00new/gert/libs 2021-05-15T13:52:47.1476076Z ** R 2021-05-15T13:52:47.1534299Z ** inst 2021-05-15T13:52:47.1543561Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:52:47.8557559Z ** help 2021-05-15T13:52:47.9142864Z *** installing help indices 2021-05-15T13:52:47.9569322Z ** building package indices 2021-05-15T13:52:48.1710658Z ** installing vignettes 2021-05-15T13:52:48.1806769Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:52:48.3959099Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:52:48.4139876Z ** testing if installed package can be loaded from final location 2021-05-15T13:52:48.6341048Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:52:48.6351181Z * DONE (gert) 2021-05-15T13:52:49.0187034Z * installing *source* package ‘usethis’ ... 2021-05-15T13:52:49.0263221Z ** package ‘usethis’ successfully unpacked and MD5 sums checked 2021-05-15T13:52:49.0264435Z ** using staged installation 2021-05-15T13:52:49.0500004Z ** R 2021-05-15T13:52:49.0827977Z ** inst 2021-05-15T13:52:49.0860564Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:52:51.7244451Z ** help 2021-05-15T13:52:51.9120262Z *** installing help indices 2021-05-15T13:52:52.0354166Z *** copying figures 2021-05-15T13:52:52.0358755Z ** building package indices 2021-05-15T13:52:52.3316258Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:52:52.6042936Z ** testing if installed package can be loaded from final location 2021-05-15T13:52:52.9250250Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:52:52.9280341Z * DONE (usethis) 2021-05-15T13:52:52.9372761Z 2021-05-15T13:52:52.9373588Z The downloaded source packages are in 2021-05-15T13:52:52.9374964Z ‘/tmp/RtmpjWHLac/downloaded_packages’ 2021-05-15T13:52:52.9390153Z Running `R CMD build`... 2021-05-15T13:52:54.9118585Z * checking for file ‘/tmp/RtmpjWHLac/remotes72e463f37e47/ropensci-tic-3b4dfb8/DESCRIPTION’ ... OK 2021-05-15T13:52:54.9120162Z * preparing ‘tic’: 2021-05-15T13:52:54.9121142Z * checking DESCRIPTION meta-information ... OK 2021-05-15T13:52:54.9122142Z * installing the package to process help pages 2021-05-15T13:52:54.9123332Z * checking for LF line-endings in source and make files and shell scripts 2021-05-15T13:52:54.9124286Z * checking for empty or unneeded directories 2021-05-15T13:52:54.9125266Z Removed empty directory ‘tic/.circleci’ 2021-05-15T13:52:54.9126235Z Removed empty directory ‘tic/pkgdown’ 2021-05-15T13:52:54.9127118Z * building ‘tic_0.10.0.tar.gz’ 2021-05-15T13:52:54.9129160Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-15T13:52:54.9130126Z (as ‘lib’ is unspecified) 2021-05-15T13:52:55.2126543Z * installing *source* package ‘tic’ ... 2021-05-15T13:52:55.2151927Z ** using staged installation 2021-05-15T13:52:55.2355137Z ** R 2021-05-15T13:52:55.2518762Z ** inst 2021-05-15T13:52:55.2547277Z ** preparing package for lazy loading 2021-05-15T13:52:55.6057552Z ** help 2021-05-15T13:52:55.7566823Z *** installing help indices 2021-05-15T13:52:55.8527831Z *** copying figures 2021-05-15T13:52:55.8532086Z ** building package indices 2021-05-15T13:52:56.1177657Z ** installing vignettes 2021-05-15T13:52:56.1203066Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:52:56.3713174Z ** testing if installed package can be loaded from final location 2021-05-15T13:52:56.6773309Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:52:56.6805815Z * DONE (tic) 2021-05-15T13:52:56.6936144Z Using github PAT from envvar GITHUB_PAT 2021-05-15T13:52:59.2290336Z Downloading GitHub repo muschellij2/ghtravis@HEAD 2021-05-15T13:53:00.2745421Z desc (1.3.0 -> 7be86f2f7...) [GitHub] 2021-05-15T13:53:00.2746877Z utf8 (NA -> 1.2.1 ) [CRAN] 2021-05-15T13:53:00.2747868Z vctrs (NA -> 0.3.8 ) [CRAN] 2021-05-15T13:53:00.2748835Z pkgconfig (NA -> 2.0.3 ) [CRAN] 2021-05-15T13:53:00.2749786Z pillar (NA -> 1.6.0 ) [CRAN] 2021-05-15T13:53:00.2750726Z tibble (NA -> 3.1.1 ) [CRAN] 2021-05-15T13:53:00.2753370Z Installing 37 packages: utf8, vctrs, pkgconfig, pillar, tibble, rematch2, fansi, diffobj, waldo, ps, processx, praise, pkgload, evaluate, ellipsis, digest, callr, brio, xml2, xfun, markdown, highr, stringr, stringi, Rcpp, knitr, commonmark, brew, xopen, sessioninfo, prettyunits, pkgbuild, testthat, rversions, roxygen2, rcmdcheck, devtools 2021-05-15T13:53:00.2755381Z rematch2 (NA -> 2.1.2 ) [CRAN] 2021-05-15T13:53:00.2756352Z fansi (NA -> 0.4.2 ) [CRAN] 2021-05-15T13:53:00.2757317Z diffobj (NA -> 0.3.4 ) [CRAN] 2021-05-15T13:53:00.2758261Z waldo (NA -> 0.2.5 ) [CRAN] 2021-05-15T13:53:00.2761529Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-15T13:53:00.2762374Z ps (NA -> 1.6.0 ) [CRAN] 2021-05-15T13:53:00.2769863Z (as ‘lib’ is unspecified) 2021-05-15T13:53:00.2770570Z processx (NA -> 3.5.2 ) [CRAN] 2021-05-15T13:53:00.2771572Z praise (NA -> 1.0.0 ) [CRAN] 2021-05-15T13:53:00.2772353Z pkgload (NA -> 1.2.1 ) [CRAN] 2021-05-15T13:53:00.2773102Z evaluate (NA -> 0.14 ) [CRAN] 2021-05-15T13:53:00.2773869Z ellipsis (NA -> 0.3.2 ) [CRAN] 2021-05-15T13:53:00.2774609Z digest (NA -> 0.6.27 ) [CRAN] 2021-05-15T13:53:00.2775365Z callr (NA -> 3.7.0 ) [CRAN] 2021-05-15T13:53:00.2776090Z brio (NA -> 1.1.2 ) [CRAN] 2021-05-15T13:53:00.2777014Z xml2 (NA -> 1.3.2 ) [CRAN] 2021-05-15T13:53:00.2778062Z xfun (NA -> 0.23 ) [CRAN] 2021-05-15T13:53:00.2778787Z markdown (NA -> 1.1 ) [CRAN] 2021-05-15T13:53:00.2779530Z highr (NA -> 0.9 ) [CRAN] 2021-05-15T13:53:00.2780262Z stringr (NA -> 1.4.0 ) [CRAN] 2021-05-15T13:53:00.2780983Z stringi (NA -> 1.6.1 ) [CRAN] 2021-05-15T13:53:00.2781719Z Rcpp (NA -> 1.0.6 ) [CRAN] 2021-05-15T13:53:00.2782427Z knitr (NA -> 1.33 ) [CRAN] 2021-05-15T13:53:00.2783180Z commonmark (NA -> 1.7 ) [CRAN] 2021-05-15T13:53:00.2783930Z brew (NA -> 1.0-6 ) [CRAN] 2021-05-15T13:53:00.2784697Z xopen (NA -> 1.0.0 ) [CRAN] 2021-05-15T13:53:00.2785458Z sessioninfo (NA -> 1.1.1 ) [CRAN] 2021-05-15T13:53:00.2786233Z prettyunits (NA -> 1.1.1 ) [CRAN] 2021-05-15T13:53:00.2787005Z pkgbuild (NA -> 1.2.0 ) [CRAN] 2021-05-15T13:53:00.2787758Z testthat (NA -> 3.0.2 ) [CRAN] 2021-05-15T13:53:00.2788689Z rversions (NA -> 2.0.2 ) [CRAN] 2021-05-15T13:53:00.2789492Z roxygen2 (NA -> 7.1.1 ) [CRAN] 2021-05-15T13:53:00.2790251Z rcmdcheck (NA -> 1.3.3 ) [CRAN] 2021-05-15T13:53:00.2790995Z devtools (NA -> 2.4.1 ) [CRAN] 2021-05-15T13:53:14.5320963Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/utf8_1.2.1.tar.gz' 2021-05-15T13:53:14.7986960Z Content type 'binary/octet-stream' length 237667 bytes (232 KB) 2021-05-15T13:53:14.8138932Z ================================================== 2021-05-15T13:53:14.8139851Z downloaded 232 KB 2021-05-15T13:53:14.8140368Z 2021-05-15T13:53:14.8176737Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/vctrs_0.3.8.tar.gz' 2021-05-15T13:53:15.0926346Z Content type 'binary/octet-stream' length 784938 bytes (766 KB) 2021-05-15T13:53:15.1236782Z ================================================== 2021-05-15T13:53:15.1237751Z downloaded 766 KB 2021-05-15T13:53:15.1238415Z 2021-05-15T13:53:15.1279007Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgconfig_2.0.3.tar.gz' 2021-05-15T13:53:15.3951884Z Content type 'application/x-tar' length 6108 bytes 2021-05-15T13:53:15.3953270Z ================================================== 2021-05-15T13:53:15.3954012Z downloaded 6108 bytes 2021-05-15T13:53:15.3954569Z 2021-05-15T13:53:15.3983704Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pillar_1.6.0.tar.gz' 2021-05-15T13:53:15.6825533Z Content type 'binary/octet-stream' length 1103143 bytes (1.1 MB) 2021-05-15T13:53:15.7106330Z ================================================== 2021-05-15T13:53:15.7107136Z downloaded 1.1 MB 2021-05-15T13:53:15.7107662Z 2021-05-15T13:53:15.7145640Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tibble_3.1.1.tar.gz' 2021-05-15T13:53:16.1066810Z Content type 'binary/octet-stream' length 690530 bytes (674 KB) 2021-05-15T13:53:16.1301378Z ================================================== 2021-05-15T13:53:16.1302492Z downloaded 674 KB 2021-05-15T13:53:16.1303009Z 2021-05-15T13:53:16.1337124Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rematch2_2.1.2.tar.gz' 2021-05-15T13:53:16.4136441Z Content type 'binary/octet-stream' length 13441 bytes (13 KB) 2021-05-15T13:53:16.4138022Z ================================================== 2021-05-15T13:53:16.4138449Z downloaded 13 KB 2021-05-15T13:53:16.4138877Z 2021-05-15T13:53:16.4178665Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fansi_0.4.2.tar.gz' 2021-05-15T13:53:16.8110464Z Content type 'binary/octet-stream' length 270970 bytes (264 KB) 2021-05-15T13:53:16.8271199Z ================================================== 2021-05-15T13:53:16.8272136Z downloaded 264 KB 2021-05-15T13:53:16.8272683Z 2021-05-15T13:53:16.8312622Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/diffobj_0.3.4.tar.gz' 2021-05-15T13:53:17.0979643Z Content type 'binary/octet-stream' length 476003 bytes (464 KB) 2021-05-15T13:53:17.1226728Z ================================================== 2021-05-15T13:53:17.1227620Z downloaded 464 KB 2021-05-15T13:53:17.1228075Z 2021-05-15T13:53:17.1264362Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/waldo_0.2.5.tar.gz' 2021-05-15T13:53:17.4219426Z Content type 'binary/octet-stream' length 26261 bytes (25 KB) 2021-05-15T13:53:17.4220718Z ================================================== 2021-05-15T13:53:17.4221359Z downloaded 25 KB 2021-05-15T13:53:17.4221795Z 2021-05-15T13:53:17.4258268Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ps_1.6.0.tar.gz' 2021-05-15T13:53:17.8162855Z Content type 'binary/octet-stream' length 120042 bytes (117 KB) 2021-05-15T13:53:17.8222846Z ================================================== 2021-05-15T13:53:17.8223313Z downloaded 117 KB 2021-05-15T13:53:17.8223763Z 2021-05-15T13:53:17.8349628Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/processx_3.5.2.tar.gz' 2021-05-15T13:53:18.1195838Z Content type 'binary/octet-stream' length 141949 bytes (138 KB) 2021-05-15T13:53:18.1334677Z ================================================== 2021-05-15T13:53:18.1335535Z downloaded 138 KB 2021-05-15T13:53:18.1336120Z 2021-05-15T13:53:18.1371844Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/praise_1.0.0.tar.gz' 2021-05-15T13:53:18.4060310Z Content type 'application/x-tar' length 6100 bytes 2021-05-15T13:53:18.4061797Z ================================================== 2021-05-15T13:53:18.4062517Z downloaded 6100 bytes 2021-05-15T13:53:18.4063080Z 2021-05-15T13:53:18.4097627Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgload_1.2.1.tar.gz' 2021-05-15T13:53:18.8081711Z Content type 'binary/octet-stream' length 60723 bytes (59 KB) 2021-05-15T13:53:18.8083320Z ================================================== 2021-05-15T13:53:18.8084050Z downloaded 59 KB 2021-05-15T13:53:18.8084560Z 2021-05-15T13:53:18.8121048Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/evaluate_0.14.tar.gz' 2021-05-15T13:53:19.1954447Z Content type 'application/x-tar' length 23661 bytes (23 KB) 2021-05-15T13:53:19.1960356Z ================================================== 2021-05-15T13:53:19.1960798Z downloaded 23 KB 2021-05-15T13:53:19.1961061Z 2021-05-15T13:53:19.1997939Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ellipsis_0.3.2.tar.gz' 2021-05-15T13:53:19.4741603Z Content type 'binary/octet-stream' length 8130 bytes 2021-05-15T13:53:19.4745098Z ================================================== 2021-05-15T13:53:19.4745568Z downloaded 8130 bytes 2021-05-15T13:53:19.4745852Z 2021-05-15T13:53:19.4781099Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/digest_0.6.27.tar.gz' 2021-05-15T13:53:19.7695960Z Content type 'binary/octet-stream' length 164442 bytes (160 KB) 2021-05-15T13:53:19.7831767Z ================================================== 2021-05-15T13:53:19.7832614Z downloaded 160 KB 2021-05-15T13:53:19.7833156Z 2021-05-15T13:53:19.7868146Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/callr_3.7.0.tar.gz' 2021-05-15T13:53:20.0559584Z Content type 'binary/octet-stream' length 74923 bytes (73 KB) 2021-05-15T13:53:20.0619069Z ================================================== 2021-05-15T13:53:20.0619577Z downloaded 73 KB 2021-05-15T13:53:20.0619845Z 2021-05-15T13:53:20.0658258Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brio_1.1.2.tar.gz' 2021-05-15T13:53:20.3354294Z Content type 'binary/octet-stream' length 12096 bytes (11 KB) 2021-05-15T13:53:20.3355646Z ================================================== 2021-05-15T13:53:20.3356487Z downloaded 11 KB 2021-05-15T13:53:20.3357026Z 2021-05-15T13:53:20.3392279Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xml2_1.3.2.tar.gz' 2021-05-15T13:53:20.7221548Z Content type 'binary/octet-stream' length 272736 bytes (266 KB) 2021-05-15T13:53:20.7397921Z ================================================== 2021-05-15T13:53:20.7398443Z downloaded 266 KB 2021-05-15T13:53:20.7398698Z 2021-05-15T13:53:20.7436292Z trying URL 'https://cloud.r-project.org/src/contrib/xfun_0.23.tar.gz' 2021-05-15T13:53:20.8742446Z Content type 'application/x-gzip' length 111696 bytes (109 KB) 2021-05-15T13:53:20.8849721Z ================================================== 2021-05-15T13:53:20.8850261Z downloaded 109 KB 2021-05-15T13:53:20.8850574Z 2021-05-15T13:53:20.8877161Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/markdown_1.1.tar.gz' 2021-05-15T13:53:21.1544047Z Content type 'application/x-tar' length 81636 bytes (79 KB) 2021-05-15T13:53:21.1623200Z ================================================== 2021-05-15T13:53:21.1623950Z downloaded 79 KB 2021-05-15T13:53:21.1624410Z 2021-05-15T13:53:21.1662429Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/highr_0.9.tar.gz' 2021-05-15T13:53:21.3533040Z Content type 'binary/octet-stream' length 15361 bytes (15 KB) 2021-05-15T13:53:21.3534574Z ================================================== 2021-05-15T13:53:21.3535287Z downloaded 15 KB 2021-05-15T13:53:21.3535798Z 2021-05-15T13:53:21.3567705Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringr_1.4.0.tar.gz' 2021-05-15T13:53:21.5472118Z Content type 'application/x-tar' length 135526 bytes (132 KB) 2021-05-15T13:53:21.5583214Z ================================================== 2021-05-15T13:53:21.5584116Z downloaded 132 KB 2021-05-15T13:53:21.5584637Z 2021-05-15T13:53:21.5620499Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringi_1.6.1.tar.gz' 2021-05-15T13:53:21.8349558Z Content type 'binary/octet-stream' length 7574951 bytes (7.2 MB) 2021-05-15T13:53:21.8945971Z ================================================== 2021-05-15T13:53:21.8946534Z downloaded 7.2 MB 2021-05-15T13:53:21.8946801Z 2021-05-15T13:53:21.8984041Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/Rcpp_1.0.6.tar.gz' 2021-05-15T13:53:22.1656275Z Content type 'binary/octet-stream' length 2954251 bytes (2.8 MB) 2021-05-15T13:53:22.2025248Z ================================================== 2021-05-15T13:53:22.2026054Z downloaded 2.8 MB 2021-05-15T13:53:22.2026548Z 2021-05-15T13:53:22.2060794Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/knitr_1.33.tar.gz' 2021-05-15T13:53:22.4724676Z Content type 'binary/octet-stream' length 890176 bytes (869 KB) 2021-05-15T13:53:22.4983888Z ================================================== 2021-05-15T13:53:22.4984419Z downloaded 869 KB 2021-05-15T13:53:22.4984741Z 2021-05-15T13:53:22.5022012Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/commonmark_1.7.tar.gz' 2021-05-15T13:53:22.7714288Z Content type 'application/x-tar' length 134376 bytes (131 KB) 2021-05-15T13:53:22.7821453Z ================================================== 2021-05-15T13:53:22.7821943Z downloaded 131 KB 2021-05-15T13:53:22.7822183Z 2021-05-15T13:53:22.7858586Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brew_1.0-6.tar.gz' 2021-05-15T13:53:23.0605230Z Content type 'application/x-tar' length 83765 bytes (81 KB) 2021-05-15T13:53:23.0667529Z ================================================== 2021-05-15T13:53:23.0668407Z downloaded 81 KB 2021-05-15T13:53:23.0668930Z 2021-05-15T13:53:23.0701568Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xopen_1.0.0.tar.gz' 2021-05-15T13:53:23.2710718Z Content type 'application/x-tar' length 11313 bytes (11 KB) 2021-05-15T13:53:23.2712528Z ================================================== 2021-05-15T13:53:23.2713241Z downloaded 11 KB 2021-05-15T13:53:23.2713747Z 2021-05-15T13:53:23.2748823Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sessioninfo_1.1.1.tar.gz' 2021-05-15T13:53:23.5454840Z Content type 'application/x-tar' length 45020 bytes (43 KB) 2021-05-15T13:53:23.5510919Z ================================================== 2021-05-15T13:53:23.5511353Z downloaded 43 KB 2021-05-15T13:53:23.5511591Z 2021-05-15T13:53:23.5546054Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/prettyunits_1.1.1.tar.gz' 2021-05-15T13:53:23.7357308Z Content type 'binary/octet-stream' length 10377 bytes (10 KB) 2021-05-15T13:53:23.7371799Z ================================================== 2021-05-15T13:53:23.7372516Z downloaded 10 KB 2021-05-15T13:53:23.7373765Z 2021-05-15T13:53:23.7408352Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgbuild_1.2.0.tar.gz' 2021-05-15T13:53:24.0225019Z Content type 'binary/octet-stream' length 30622 bytes (29 KB) 2021-05-15T13:53:24.0242163Z ================================================== 2021-05-15T13:53:24.0242625Z downloaded 29 KB 2021-05-15T13:53:24.0242892Z 2021-05-15T13:53:24.0281841Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/testthat_3.0.2.tar.gz' 2021-05-15T13:53:24.2940091Z Content type 'binary/octet-stream' length 678280 bytes (662 KB) 2021-05-15T13:53:24.3184063Z ================================================== 2021-05-15T13:53:24.3184800Z downloaded 662 KB 2021-05-15T13:53:24.3185362Z 2021-05-15T13:53:24.3221150Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rversions_2.0.2.tar.gz' 2021-05-15T13:53:24.5997066Z Content type 'binary/octet-stream' length 40913 bytes (39 KB) 2021-05-15T13:53:24.6036999Z ================================================== 2021-05-15T13:53:24.6037480Z downloaded 39 KB 2021-05-15T13:53:24.6037787Z 2021-05-15T13:53:24.6073981Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/roxygen2_7.1.1.tar.gz' 2021-05-15T13:53:24.8292401Z Content type 'binary/octet-stream' length 255098 bytes (249 KB) 2021-05-15T13:53:24.8469551Z ================================================== 2021-05-15T13:53:24.8470490Z downloaded 249 KB 2021-05-15T13:53:24.8471017Z 2021-05-15T13:53:24.8505539Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rcmdcheck_1.3.3.tar.gz' 2021-05-15T13:53:25.1251844Z Content type 'application/x-tar' length 44991 bytes (43 KB) 2021-05-15T13:53:25.1301982Z ================================================== 2021-05-15T13:53:25.1302820Z downloaded 43 KB 2021-05-15T13:53:25.1303479Z 2021-05-15T13:53:25.1336472Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/devtools_2.4.1.tar.gz' 2021-05-15T13:53:25.5266600Z Content type 'binary/octet-stream' length 370450 bytes (361 KB) 2021-05-15T13:53:25.5452853Z ================================================== 2021-05-15T13:53:25.5453558Z downloaded 361 KB 2021-05-15T13:53:25.5453866Z 2021-05-15T13:53:25.8558920Z * installing *source* package ‘utf8’ ... 2021-05-15T13:53:25.8619411Z ** package ‘utf8’ successfully unpacked and MD5 sums checked 2021-05-15T13:53:25.8620580Z ** using staged installation 2021-05-15T13:53:25.8750837Z ** libs 2021-05-15T13:53:25.8804004Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c as_utf8.c -o as_utf8.o 2021-05-15T13:53:25.9446177Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c bytes.c -o bytes.o 2021-05-15T13:53:26.0811210Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c context.c -o context.o 2021-05-15T13:53:26.1403366Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:53:26.1823373Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c render.c -o render.o 2021-05-15T13:53:26.2445528Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c render_table.c -o render_table.o 2021-05-15T13:53:26.4016947Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c string.c -o string.o 2021-05-15T13:53:26.4616285Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c text.c -o text.o 2021-05-15T13:53:26.5860061Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_encode.c -o utf8_encode.o 2021-05-15T13:53:26.6585520Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_format.c -o utf8_format.o 2021-05-15T13:53:26.7367287Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_normalize.c -o utf8_normalize.o 2021-05-15T13:53:26.7965066Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_valid.c -o utf8_valid.o 2021-05-15T13:53:26.8477310Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_width.c -o utf8_width.o 2021-05-15T13:53:26.9016941Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c util.c -o util.o 2021-05-15T13:53:26.9487940Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/array.c -o utf8lite/src/array.o 2021-05-15T13:53:26.9965391Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/char.c -o utf8lite/src/char.o 2021-05-15T13:53:27.0552429Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/encode.c -o utf8lite/src/encode.o 2021-05-15T13:53:27.1067227Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/error.c -o utf8lite/src/error.o 2021-05-15T13:53:27.1417307Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/escape.c -o utf8lite/src/escape.o 2021-05-15T13:53:27.1971446Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/graph.c -o utf8lite/src/graph.o 2021-05-15T13:53:27.2364906Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o 2021-05-15T13:53:27.4309736Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o 2021-05-15T13:53:27.7201481Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/render.c -o utf8lite/src/render.o 2021-05-15T13:53:27.8902207Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/text.c -o utf8lite/src/text.o 2021-05-15T13:53:27.9593139Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o 2021-05-15T13:53:28.0193093Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o 2021-05-15T13:53:28.0898376Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o 2021-05-15T13:53:28.1589165Z ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o 2021-05-15T13:53:28.1660300Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:53:28.1978644Z installing to /home/runner/work/_temp/Library/00LOCK-utf8/00new/utf8/libs 2021-05-15T13:53:28.1983181Z ** R 2021-05-15T13:53:28.2068835Z ** inst 2021-05-15T13:53:28.2077842Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:53:28.6506194Z ** help 2021-05-15T13:53:28.6789286Z *** installing help indices 2021-05-15T13:53:28.7025392Z ** building package indices 2021-05-15T13:53:28.9013736Z ** installing vignettes 2021-05-15T13:53:28.9014752Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:53:29.0771979Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:53:29.0951003Z ** testing if installed package can be loaded from final location 2021-05-15T13:53:29.2723972Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:53:29.2730942Z * DONE (utf8) 2021-05-15T13:53:29.4796881Z * installing *source* package ‘pkgconfig’ ... 2021-05-15T13:53:29.4806187Z ** package ‘pkgconfig’ successfully unpacked and MD5 sums checked 2021-05-15T13:53:29.4807357Z ** using staged installation 2021-05-15T13:53:29.4919806Z ** R 2021-05-15T13:53:29.4944717Z ** inst 2021-05-15T13:53:29.4952319Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:53:29.7266217Z ** help 2021-05-15T13:53:29.7483787Z *** installing help indices 2021-05-15T13:53:29.7649680Z ** building package indices 2021-05-15T13:53:29.9528321Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:53:30.1277216Z ** testing if installed package can be loaded from final location 2021-05-15T13:53:30.2991138Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:53:30.2996415Z * DONE (pkgconfig) 2021-05-15T13:53:30.5682491Z * installing *source* package ‘fansi’ ... 2021-05-15T13:53:30.5716566Z ** package ‘fansi’ successfully unpacked and MD5 sums checked 2021-05-15T13:53:30.5717752Z ** using staged installation 2021-05-15T13:53:30.5845559Z ** libs 2021-05-15T13:53:30.5929469Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c assumptions.c -o assumptions.o 2021-05-15T13:53:30.6311204Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c has.c -o has.o 2021-05-15T13:53:30.6899117Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:53:30.7352352Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c nchar.c -o nchar.o 2021-05-15T13:53:30.8040496Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read.c -o read.o 2021-05-15T13:53:31.2363130Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rnchar.c -o rnchar.o 2021-05-15T13:53:31.2820448Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c state.c -o state.o 2021-05-15T13:53:31.6277225Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c strip.c -o strip.o 2021-05-15T13:53:31.7615082Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c strsplit.c -o strsplit.o 2021-05-15T13:53:31.8058234Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c tabs.c -o tabs.o 2021-05-15T13:53:31.9235622Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c tohtml.c -o tohtml.o 2021-05-15T13:53:32.1585573Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unhandled.c -o unhandled.o 2021-05-15T13:53:32.2572490Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unique.c -o unique.o 2021-05-15T13:53:32.3113786Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-15T13:53:32.3679855Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-15T13:53:32.5244400Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c wrap.c -o wrap.o 2021-05-15T13:53:32.8220875Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fansi.so assumptions.o has.o init.o nchar.o read.o rnchar.o state.o strip.o strsplit.o tabs.o tohtml.o unhandled.o unique.o utf8.o utils.o wrap.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:53:32.8491674Z installing to /home/runner/work/_temp/Library/00LOCK-fansi/00new/fansi/libs 2021-05-15T13:53:32.8508081Z ** R 2021-05-15T13:53:32.8603644Z ** inst 2021-05-15T13:53:32.8612762Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:53:33.4570638Z ** help 2021-05-15T13:53:33.5207583Z *** installing help indices 2021-05-15T13:53:33.5585950Z ** building package indices 2021-05-15T13:53:33.7757867Z ** installing vignettes 2021-05-15T13:53:33.7814593Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:53:33.9566028Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:53:33.9749285Z ** testing if installed package can be loaded from final location 2021-05-15T13:53:34.1531680Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:53:34.1543568Z * DONE (fansi) 2021-05-15T13:53:34.5860868Z * installing *source* package ‘diffobj’ ... 2021-05-15T13:53:34.5959012Z ** package ‘diffobj’ successfully unpacked and MD5 sums checked 2021-05-15T13:53:34.5960245Z ** using staged installation 2021-05-15T13:53:34.6103426Z ** libs 2021-05-15T13:53:34.6152362Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diff.c -o diff.o 2021-05-15T13:53:34.8117995Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffobj.c -o diffobj.o 2021-05-15T13:53:34.8701966Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:53:34.9149079Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o diffobj.so diff.o diffobj.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:53:34.9366373Z installing to /home/runner/work/_temp/Library/00LOCK-diffobj/00new/diffobj/libs 2021-05-15T13:53:34.9380135Z ** R 2021-05-15T13:53:34.9773624Z ** inst 2021-05-15T13:53:34.9789141Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:53:41.1007981Z ** help 2021-05-15T13:53:41.3090250Z *** installing help indices 2021-05-15T13:53:41.4496226Z ** building package indices 2021-05-15T13:53:41.7236110Z ** installing vignettes 2021-05-15T13:53:41.7301455Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:53:42.0161290Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:53:42.0331240Z ** testing if installed package can be loaded from final location 2021-05-15T13:53:42.4380952Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:53:42.4462152Z * DONE (diffobj) 2021-05-15T13:53:42.7299204Z * installing *source* package ‘ps’ ... 2021-05-15T13:53:42.7336336Z ** package ‘ps’ successfully unpacked and MD5 sums checked 2021-05-15T13:53:42.7337951Z ** using staged installation 2021-05-15T13:53:42.9251761Z ** libs 2021-05-15T13:53:42.9304466Z gcc -g -O2 -Wall px.c -o px 2021-05-15T13:53:43.0541644Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:53:43.1176425Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-common.c -o api-common.o 2021-05-15T13:53:43.1806535Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c common.c -o common.o 2021-05-15T13:53:43.2451738Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c extra.c -o extra.o 2021-05-15T13:53:43.3964664Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dummy.c -o dummy.o 2021-05-15T13:53:43.4447723Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error-codes.c -o error-codes.o 2021-05-15T13:53:43.7088273Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c posix.c -o posix.o 2021-05-15T13:53:43.9151588Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-posix.c -o api-posix.o 2021-05-15T13:53:44.0122008Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c linux.c -o linux.o 2021-05-15T13:53:44.1633061Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-linux.c -o api-linux.o 2021-05-15T13:53:44.5839444Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o ps.so init.o api-common.o common.o extra.o dummy.o error-codes.o posix.o api-posix.o linux.o api-linux.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:53:44.6102948Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-ps/00new/ps 2021-05-15T13:53:44.6139423Z ** R 2021-05-15T13:53:44.6241924Z ** inst 2021-05-15T13:53:44.6250975Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:53:45.5857391Z ** help 2021-05-15T13:53:45.7193471Z *** installing help indices 2021-05-15T13:53:45.8086186Z ** building package indices 2021-05-15T13:53:46.0709724Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:53:46.2450664Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:53:46.2626112Z ** testing if installed package can be loaded from final location 2021-05-15T13:53:46.4465743Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:53:46.4478036Z * DONE (ps) 2021-05-15T13:53:46.6473282Z * installing *source* package ‘praise’ ... 2021-05-15T13:53:46.6481767Z ** package ‘praise’ successfully unpacked and MD5 sums checked 2021-05-15T13:53:46.6482848Z ** using staged installation 2021-05-15T13:53:46.6582263Z ** R 2021-05-15T13:53:46.6619566Z ** inst 2021-05-15T13:53:46.6627699Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:53:46.8777521Z ** help 2021-05-15T13:53:46.8874315Z *** installing help indices 2021-05-15T13:53:46.9085038Z ** building package indices 2021-05-15T13:53:47.0895623Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:53:47.2572665Z ** testing if installed package can be loaded from final location 2021-05-15T13:53:47.4222260Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:53:47.4227082Z * DONE (praise) 2021-05-15T13:53:47.7362794Z * installing *source* package ‘pkgload’ ... 2021-05-15T13:53:47.7409060Z ** package ‘pkgload’ successfully unpacked and MD5 sums checked 2021-05-15T13:53:47.7410281Z ** using staged installation 2021-05-15T13:53:47.7545144Z ** R 2021-05-15T13:53:47.7642840Z ** inst 2021-05-15T13:53:47.7649370Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:53:48.5668505Z ** help 2021-05-15T13:53:48.6191242Z *** installing help indices 2021-05-15T13:53:48.6623717Z ** building package indices 2021-05-15T13:53:48.8804278Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:53:49.3320766Z ** testing if installed package can be loaded from final location 2021-05-15T13:53:49.7926201Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:53:49.7938441Z * DONE (pkgload) 2021-05-15T13:53:50.0296336Z * installing *source* package ‘evaluate’ ... 2021-05-15T13:53:50.0313959Z ** package ‘evaluate’ successfully unpacked and MD5 sums checked 2021-05-15T13:53:50.0315156Z ** using staged installation 2021-05-15T13:53:50.0448864Z ** R 2021-05-15T13:53:50.0498980Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:53:50.5230086Z ** help 2021-05-15T13:53:50.5511491Z *** installing help indices 2021-05-15T13:53:50.5824198Z ** building package indices 2021-05-15T13:53:50.7787866Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:53:50.9516142Z ** testing if installed package can be loaded from final location 2021-05-15T13:53:51.1270613Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:53:51.1274613Z * DONE (evaluate) 2021-05-15T13:53:51.3150809Z * installing *source* package ‘ellipsis’ ... 2021-05-15T13:53:51.3159850Z ** package ‘ellipsis’ successfully unpacked and MD5 sums checked 2021-05-15T13:53:51.3160914Z ** using staged installation 2021-05-15T13:53:51.3284953Z ** libs 2021-05-15T13:53:51.3331884Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dots.c -o dots.o 2021-05-15T13:53:51.4031096Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:53:51.4421841Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o ellipsis.so dots.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:53:51.4637204Z installing to /home/runner/work/_temp/Library/00LOCK-ellipsis/00new/ellipsis/libs 2021-05-15T13:53:51.4650762Z ** R 2021-05-15T13:53:51.4682817Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:53:51.7220510Z ** help 2021-05-15T13:53:51.7451935Z *** installing help indices 2021-05-15T13:53:51.7624120Z ** building package indices 2021-05-15T13:53:51.9493668Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:53:52.1225173Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:53:52.1388665Z ** testing if installed package can be loaded from final location 2021-05-15T13:53:52.3235081Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:53:52.3240936Z * DONE (ellipsis) 2021-05-15T13:53:52.5815722Z * installing *source* package ‘digest’ ... 2021-05-15T13:53:52.5849070Z ** package ‘digest’ successfully unpacked and MD5 sums checked 2021-05-15T13:53:52.5852151Z ** using staged installation 2021-05-15T13:53:52.5959123Z ** libs 2021-05-15T13:53:52.6017373Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c SpookyV2.cpp -o SpookyV2.o 2021-05-15T13:53:52.7540387Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o 2021-05-15T13:53:53.0530997Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3.c -o blake3.o 2021-05-15T13:53:53.7439204Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3_dispatch.c -o blake3_dispatch.o 2021-05-15T13:53:53.9630061Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3_portable.c -o blake3_portable.o 2021-05-15T13:53:54.4806781Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c crc32.c -o crc32.o 2021-05-15T13:53:54.5524346Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest.c -o digest.o 2021-05-15T13:53:54.7578307Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest2int.c -o digest2int.o 2021-05-15T13:53:54.8123484Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:53:54.8347481Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c md5.c -o md5.o 2021-05-15T13:53:54.9695852Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pmurhash.c -o pmurhash.o 2021-05-15T13:53:55.0149394Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c raes.c -o raes.o 2021-05-15T13:53:55.0773492Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha1.c -o sha1.o 2021-05-15T13:53:55.3305067Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha2.c -o sha2.o 2021-05-15T13:53:55.4380099Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha256.c -o sha256.o 2021-05-15T13:53:55.9242876Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c spooky_serialize.cpp -o spooky_serialize.o 2021-05-15T13:53:56.0337079Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c xxhash.c -o xxhash.o 2021-05-15T13:53:56.2714539Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o digest.so SpookyV2.o aes.o blake3.o blake3_dispatch.o blake3_portable.o crc32.o digest.o digest2int.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o spooky_serialize.o xxhash.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:53:56.3139750Z installing to /home/runner/work/_temp/Library/00LOCK-digest/00new/digest/libs 2021-05-15T13:53:56.3141145Z ** R 2021-05-15T13:53:56.3197006Z ** demo 2021-05-15T13:53:56.3202263Z ** inst 2021-05-15T13:53:56.3219092Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:53:56.8305547Z ** help 2021-05-15T13:53:56.8649124Z *** installing help indices 2021-05-15T13:53:56.8878775Z ** building package indices 2021-05-15T13:53:57.0800641Z ** installing vignettes 2021-05-15T13:53:57.0857670Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:53:57.2619207Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:53:57.2796092Z ** testing if installed package can be loaded from final location 2021-05-15T13:53:57.4547905Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:53:57.4559651Z * DONE (digest) 2021-05-15T13:53:57.6700942Z * installing *source* package ‘brio’ ... 2021-05-15T13:53:57.6713543Z ** package ‘brio’ successfully unpacked and MD5 sums checked 2021-05-15T13:53:57.6714641Z ** using staged installation 2021-05-15T13:53:57.6891790Z ** libs 2021-05-15T13:53:57.6941336Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c brio.c -o brio.o 2021-05-15T13:53:57.7311161Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c file_line_endings.c -o file_line_endings.o 2021-05-15T13:53:57.7787529Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:53:57.8210860Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_file.c -o read_file.o 2021-05-15T13:53:57.8723313Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_file_raw.c -o read_file_raw.o 2021-05-15T13:53:57.9228666Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_lines.c -o read_lines.o 2021-05-15T13:53:58.0005148Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write_file.c -o write_file.o 2021-05-15T13:53:58.0456394Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write_lines.c -o write_lines.o 2021-05-15T13:53:58.1005793Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o brio.so brio.o file_line_endings.o init.o read_file.o read_file_raw.o read_lines.o write_file.o write_lines.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:53:58.1258350Z installing to /home/runner/work/_temp/Library/00LOCK-brio/00new/brio/libs 2021-05-15T13:53:58.1259503Z ** R 2021-05-15T13:53:58.1282215Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:53:58.3505905Z ** help 2021-05-15T13:53:58.3697626Z *** installing help indices 2021-05-15T13:53:58.3888788Z ** building package indices 2021-05-15T13:53:58.5755411Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:53:58.7489260Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:53:58.7672970Z ** testing if installed package can be loaded from final location 2021-05-15T13:53:58.9420189Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:53:58.9425284Z * DONE (brio) 2021-05-15T13:53:59.2221208Z * installing *source* package ‘xml2’ ... 2021-05-15T13:53:59.2259572Z ** package ‘xml2’ successfully unpacked and MD5 sums checked 2021-05-15T13:53:59.2260725Z ** using staged installation 2021-05-15T13:53:59.2396581Z Found pkg-config cflags and libs! 2021-05-15T13:53:59.3214677Z Using PKG_CFLAGS=-I/usr/include/libxml2 2021-05-15T13:53:59.3215971Z Using PKG_LIBS=-lxml2 2021-05-15T13:53:59.5588275Z ** libs 2021-05-15T13:53:59.5639537Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c connection.cpp -o connection.o 2021-05-15T13:54:00.0575126Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:54:00.1021837Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_doc.cpp -o xml2_doc.o 2021-05-15T13:54:00.6267770Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_init.cpp -o xml2_init.o 2021-05-15T13:54:01.0281347Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_namespace.cpp -o xml2_namespace.o 2021-05-15T13:54:01.6911804Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_node.cpp -o xml2_node.o 2021-05-15T13:54:03.4535411Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_output.cpp -o xml2_output.o 2021-05-15T13:54:03.9639824Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_schema.cpp -o xml2_schema.o 2021-05-15T13:54:04.5146727Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_url.cpp -o xml2_url.o 2021-05-15T13:54:04.9587639Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_xpath.cpp -o xml2_xpath.o 2021-05-15T13:54:05.3771819Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o xml2.so connection.o init.o xml2_doc.o xml2_init.o xml2_namespace.o xml2_node.o xml2_output.o xml2_schema.o xml2_url.o xml2_xpath.o -lxml2 -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:54:05.4658752Z installing to /home/runner/work/_temp/Library/00LOCK-xml2/00new/xml2/libs 2021-05-15T13:54:05.4686405Z ** R 2021-05-15T13:54:05.4795549Z ** inst 2021-05-15T13:54:05.4808824Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:54:06.3610829Z ** help 2021-05-15T13:54:06.4508245Z *** installing help indices 2021-05-15T13:54:06.4979676Z ** building package indices 2021-05-15T13:54:06.7204365Z ** installing vignettes 2021-05-15T13:54:06.7301799Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:54:06.9099128Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:54:06.9280509Z ** testing if installed package can be loaded from final location 2021-05-15T13:54:07.1202916Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:54:07.1217013Z * DONE (xml2) 2021-05-15T13:54:07.3895770Z * installing *source* package ‘xfun’ ... 2021-05-15T13:54:07.3928486Z ** package ‘xfun’ successfully unpacked and MD5 sums checked 2021-05-15T13:54:07.3929530Z ** using staged installation 2021-05-15T13:54:07.4073974Z ** libs 2021-05-15T13:54:07.4150770Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-15T13:54:07.5105613Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:54:07.5547413Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o xfun.so base64.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:54:07.5870721Z installing to /home/runner/work/_temp/Library/00LOCK-xfun/00new/xfun/libs 2021-05-15T13:54:07.5883037Z ** R 2021-05-15T13:54:07.6022743Z ** inst 2021-05-15T13:54:07.6034170Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:54:08.8607872Z ** help 2021-05-15T13:54:09.0010153Z *** installing help indices 2021-05-15T13:54:09.1005897Z ** building package indices 2021-05-15T13:54:09.3671948Z ** installing vignettes 2021-05-15T13:54:09.3741396Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:54:09.5513851Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:54:09.5682145Z ** testing if installed package can be loaded from final location 2021-05-15T13:54:09.7605169Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:54:09.7619796Z * DONE (xfun) 2021-05-15T13:54:12.1734414Z * installing *source* package ‘stringi’ ... 2021-05-15T13:54:12.2835688Z ** package ‘stringi’ successfully unpacked and MD5 sums checked 2021-05-15T13:54:12.2836535Z ** using staged installation 2021-05-15T13:54:12.3976271Z checking for R_HOME... /opt/R/devel/lib/R 2021-05-15T13:54:12.3981011Z checking for R... /opt/R/devel/lib/R/bin/R 2021-05-15T13:54:12.5500198Z checking for endianness... little 2021-05-15T13:54:12.7007446Z checking for R >= 3.1.0 for C++11 use... yes 2021-05-15T13:54:12.8536498Z checking for R < 3.4.0 for CXX1X flag use... no 2021-05-15T13:54:12.8541137Z checking for cat... /usr/bin/cat 2021-05-15T13:54:13.0685396Z checking for local ICUDT_DIR... icu69/data 2021-05-15T13:54:13.0686498Z checking for gcc... gcc 2021-05-15T13:54:13.1251807Z checking whether the C compiler works... yes 2021-05-15T13:54:13.1253248Z checking for C compiler default output file name... a.out 2021-05-15T13:54:13.1611646Z checking for suffix of executables... 2021-05-15T13:54:13.2050468Z checking whether we are cross compiling... no 2021-05-15T13:54:13.2270165Z checking for suffix of object files... o 2021-05-15T13:54:13.2473669Z checking whether we are using the GNU C compiler... yes 2021-05-15T13:54:13.2669526Z checking whether gcc accepts -g... yes 2021-05-15T13:54:13.3005226Z checking for gcc option to accept ISO C89... none needed 2021-05-15T13:54:13.3208514Z checking how to run the C preprocessor... gcc -E 2021-05-15T13:54:13.3425308Z checking for grep that handles long lines and -e... /usr/bin/grep 2021-05-15T13:54:13.3441163Z checking for egrep... /usr/bin/grep -E 2021-05-15T13:54:13.4454862Z checking for ANSI C header files... yes 2021-05-15T13:54:13.4732998Z checking for sys/types.h... yes 2021-05-15T13:54:13.5049356Z checking for sys/stat.h... yes 2021-05-15T13:54:13.5363071Z checking for stdlib.h... yes 2021-05-15T13:54:13.5688553Z checking for string.h... yes 2021-05-15T13:54:13.6021583Z checking for memory.h... yes 2021-05-15T13:54:13.6348880Z checking for strings.h... yes 2021-05-15T13:54:13.6687438Z checking for inttypes.h... yes 2021-05-15T13:54:13.7027082Z checking for stdint.h... yes 2021-05-15T13:54:13.7399476Z checking for unistd.h... yes 2021-05-15T13:54:13.7846553Z checking elf.h usability... yes 2021-05-15T13:54:13.7954465Z checking elf.h presence... yes 2021-05-15T13:54:13.7955297Z checking for elf.h... yes 2021-05-15T13:54:13.8453016Z checking whether we are using the GNU C++ compiler... yes 2021-05-15T13:54:13.8665713Z checking whether g++ -std=gnu++11 accepts -g... yes 2021-05-15T13:54:14.1721677Z checking whether the C++ compiler supports the long long type... yes 2021-05-15T13:54:14.1962613Z checking whether the compiler implements namespaces... yes 2021-05-15T13:54:14.3388785Z checking whether the compiler supports Standard Template Library... yes 2021-05-15T13:54:14.8353923Z checking whether std::map is available... yes 2021-05-15T13:54:14.8374274Z checking for pkg-config... /usr/bin/pkg-config 2021-05-15T13:54:14.8532301Z checking with pkg-config for the system ICU4C... 66.1 2021-05-15T13:54:14.8554331Z checking for ICU4C >= 55... yes 2021-05-15T13:54:14.8618459Z checking for additional required CPPFLAGS, LDFLAGS, and LIBS... done 2021-05-15T13:54:15.5436396Z checking whether an ICU4C-based project can be built... yes 2021-05-15T13:54:15.5999465Z checking programmatically for sufficient U_ICU_VERSION_MAJOR_NUM... yes 2021-05-15T13:54:15.8680254Z checking programmatically if U_CHARSET_IS_UTF8 is defined and set... yes 2021-05-15T13:54:16.8195628Z checking the capabilities of the ICU data library (ucnv, uloc, utrans)... yes 2021-05-15T13:54:17.3869459Z checking the capabilities of the ICU data library (ucol)... yes 2021-05-15T13:54:17.4215165Z configure: creating ./config.status 2021-05-15T13:54:17.4967782Z config.status: creating src/Makevars 2021-05-15T13:54:17.5133929Z config.status: creating src/uconfig_local.h 2021-05-15T13:54:17.5304460Z config.status: creating src/install.libs.R 2021-05-15T13:54:17.5458200Z 2021-05-15T13:54:17.5459053Z *** stringi configure summary: 2021-05-15T13:54:17.5459690Z ICU_FOUND=1 2021-05-15T13:54:17.5460326Z STRINGI_CXXSTD=CXX_STD=CXX11 2021-05-15T13:54:17.5461497Z STRINGI_CFLAGS= -fpic 2021-05-15T13:54:17.5462479Z STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H 2021-05-15T13:54:17.5463385Z STRINGI_CXXFLAGS= -fpic 2021-05-15T13:54:17.5464312Z STRINGI_LDFLAGS=-L/usr/lib/x86_64-linux-gnu 2021-05-15T13:54:17.5465305Z STRINGI_LIBS=-licui18n -licuuc -licudata 2021-05-15T13:54:17.5465932Z 2021-05-15T13:54:17.5466695Z *** Compiler settings used: 2021-05-15T13:54:17.5468442Z CC=gcc 2021-05-15T13:54:17.5469221Z LD=g++ -std=gnu++14 2021-05-15T13:54:17.5469783Z CFLAGS=-g -O2 -fpic 2021-05-15T13:54:17.5470507Z CPPFLAGS=-I/usr/local/include -UDEBUG -DNDEBUG 2021-05-15T13:54:17.5471144Z CXX=g++ -std=gnu++11 2021-05-15T13:54:17.5471704Z CXXFLAGS=-g -O2 -fpic 2021-05-15T13:54:17.5472109Z LDFLAGS= 2021-05-15T13:54:17.5472444Z LIBS= 2021-05-15T13:54:17.5472671Z 2021-05-15T13:54:17.5826108Z ** libs 2021-05-15T13:54:17.5912339Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_brkiter.cpp -o stri_brkiter.o 2021-05-15T13:54:18.2321325Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_collator.cpp -o stri_collator.o 2021-05-15T13:54:18.8324553Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_common.cpp -o stri_common.o 2021-05-15T13:54:19.4593830Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_compare.cpp -o stri_compare.o 2021-05-15T13:54:20.1565593Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_base.cpp -o stri_container_base.o 2021-05-15T13:54:20.6469703Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o 2021-05-15T13:54:21.4527269Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listint.cpp -o stri_container_listint.o 2021-05-15T13:54:21.9773704Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listraw.cpp -o stri_container_listraw.o 2021-05-15T13:54:22.5306254Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listutf8.cpp -o stri_container_listutf8.o 2021-05-15T13:54:23.0569703Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_regex.cpp -o stri_container_regex.o 2021-05-15T13:54:23.6681964Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_usearch.cpp -o stri_container_usearch.o 2021-05-15T13:54:24.2824705Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf16.cpp -o stri_container_utf16.o 2021-05-15T13:54:24.9809131Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8.cpp -o stri_container_utf8.o 2021-05-15T13:54:25.6205469Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o 2021-05-15T13:54:26.2093942Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o 2021-05-15T13:54:27.1296730Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_detection.cpp -o stri_encoding_detection.o 2021-05-15T13:54:28.6507214Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_management.cpp -o stri_encoding_management.o 2021-05-15T13:54:29.3044469Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_escape.cpp -o stri_escape.o 2021-05-15T13:54:29.8833285Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_exception.cpp -o stri_exception.o 2021-05-15T13:54:30.3975993Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ICU_settings.cpp -o stri_ICU_settings.o 2021-05-15T13:54:30.9063680Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_join.cpp -o stri_join.o 2021-05-15T13:54:31.8008365Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_length.cpp -o stri_length.o 2021-05-15T13:54:32.4537022Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_pad.cpp -o stri_pad.o 2021-05-15T13:54:33.0600050Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_prepare_arg.cpp -o stri_prepare_arg.o 2021-05-15T13:54:33.8105482Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_random.cpp -o stri_random.o 2021-05-15T13:54:34.5564775Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_reverse.cpp -o stri_reverse.o 2021-05-15T13:54:35.1158081Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_count.cpp -o stri_search_class_count.o 2021-05-15T13:54:35.7376237Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_detect.cpp -o stri_search_class_detect.o 2021-05-15T13:54:36.3697015Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_extract.cpp -o stri_search_class_extract.o 2021-05-15T13:54:37.2088004Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_locate.cpp -o stri_search_class_locate.o 2021-05-15T13:54:38.0271365Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_replace.cpp -o stri_search_class_replace.o 2021-05-15T13:54:38.9925079Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_split.cpp -o stri_search_class_split.o 2021-05-15T13:54:39.7841902Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o 2021-05-15T13:54:40.4884477Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_subset.cpp -o stri_search_class_subset.o 2021-05-15T13:54:41.2226564Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_trim.cpp -o stri_search_class_trim.o 2021-05-15T13:54:41.8523253Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_common.cpp -o stri_search_common.o 2021-05-15T13:54:42.4723116Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_count.cpp -o stri_search_coll_count.o 2021-05-15T13:54:43.0881281Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o 2021-05-15T13:54:43.7203927Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o 2021-05-15T13:54:44.5035132Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o 2021-05-15T13:54:45.2776767Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o 2021-05-15T13:54:46.1201355Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_split.cpp -o stri_search_coll_split.o 2021-05-15T13:54:46.9314105Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o 2021-05-15T13:54:47.6418402Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o 2021-05-15T13:54:48.3593502Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o 2021-05-15T13:54:48.8868565Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o 2021-05-15T13:54:49.5679865Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o 2021-05-15T13:54:50.2511654Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o 2021-05-15T13:54:50.9321153Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o 2021-05-15T13:54:51.4860175Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o 2021-05-15T13:54:52.0330496Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o 2021-05-15T13:54:52.7521112Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o 2021-05-15T13:54:53.4644867Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o 2021-05-15T13:54:54.2533143Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o 2021-05-15T13:54:55.0064242Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o 2021-05-15T13:54:55.7356336Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o 2021-05-15T13:54:56.3851744Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_in.cpp -o stri_search_in.o 2021-05-15T13:54:56.3998956Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_other_split.cpp -o stri_search_other_split.o 2021-05-15T13:54:57.2130621Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_count.cpp -o stri_search_regex_count.o 2021-05-15T13:54:57.7691609Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o 2021-05-15T13:54:58.3295204Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o 2021-05-15T13:54:59.0937862Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o 2021-05-15T13:54:59.8307544Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_match.cpp -o stri_search_regex_match.o 2021-05-15T13:55:00.7318651Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o 2021-05-15T13:55:01.3953780Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_split.cpp -o stri_search_regex_split.o 2021-05-15T13:55:02.1660299Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o 2021-05-15T13:55:02.8123565Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sort.cpp -o stri_sort.o 2021-05-15T13:55:04.3195904Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stats.cpp -o stri_stats.o 2021-05-15T13:55:04.9335923Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stringi.cpp -o stri_stringi.o 2021-05-15T13:55:05.4364727Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sub.cpp -o stri_sub.o 2021-05-15T13:55:06.1528115Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_test.cpp -o stri_test.o 2021-05-15T13:55:06.6718256Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_zone.cpp -o stri_time_zone.o 2021-05-15T13:55:07.2313094Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_calendar.cpp -o stri_time_calendar.o 2021-05-15T13:55:08.0115449Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_symbols.cpp -o stri_time_symbols.o 2021-05-15T13:55:08.7188436Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_format.cpp -o stri_time_format.o 2021-05-15T13:55:09.5931720Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_casemap.cpp -o stri_trans_casemap.o 2021-05-15T13:55:10.2538405Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_other.cpp -o stri_trans_other.o 2021-05-15T13:55:10.9406104Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_normalization.cpp -o stri_trans_normalization.o 2021-05-15T13:55:11.5393067Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o 2021-05-15T13:55:12.1085633Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ucnv.cpp -o stri_ucnv.o 2021-05-15T13:55:12.7104299Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_uloc.cpp -o stri_uloc.o 2021-05-15T13:55:13.2162750Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_utils.cpp -o stri_utils.o 2021-05-15T13:55:13.7659259Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_wrap.cpp -o stri_wrap.o 2021-05-15T13:55:15.0514014Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o stringi.so stri_brkiter.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_stats.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:55:15.2602979Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-stringi/00new/stringi 2021-05-15T13:55:15.3380657Z ** R 2021-05-15T13:55:15.3665565Z ** inst 2021-05-15T13:55:15.3673598Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:55:16.4172818Z ** help 2021-05-15T13:55:16.8296323Z *** installing help indices 2021-05-15T13:55:17.0280811Z ** building package indices 2021-05-15T13:55:17.4058760Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:55:17.5847344Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:55:17.6060021Z ** testing if installed package can be loaded from final location 2021-05-15T13:55:17.7978651Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:55:17.7991093Z * DONE (stringi) 2021-05-15T13:55:18.7283801Z * installing *source* package ‘Rcpp’ ... 2021-05-15T13:55:18.7630382Z ** package ‘Rcpp’ successfully unpacked and MD5 sums checked 2021-05-15T13:55:18.7631771Z ** using staged installation 2021-05-15T13:55:18.7741536Z ** libs 2021-05-15T13:55:18.7792222Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c api.cpp -o api.o 2021-05-15T13:55:21.7467882Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c attributes.cpp -o attributes.o 2021-05-15T13:55:36.8005134Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c barrier.cpp -o barrier.o 2021-05-15T13:55:36.9937233Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c date.cpp -o date.o 2021-05-15T13:55:40.2056113Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c module.cpp -o module.o 2021-05-15T13:55:46.3471552Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c rcpp_init.cpp -o rcpp_init.o 2021-05-15T13:55:49.1424379Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o Rcpp.so api.o attributes.o barrier.o date.o module.o rcpp_init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:55:49.3112467Z installing to /home/runner/work/_temp/Library/00LOCK-Rcpp/00new/Rcpp/libs 2021-05-15T13:55:49.3232132Z ** R 2021-05-15T13:55:49.3364565Z ** inst 2021-05-15T13:55:49.3756559Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:55:51.0186329Z ** help 2021-05-15T13:55:51.1120115Z *** installing help indices 2021-05-15T13:55:51.1719912Z ** building package indices 2021-05-15T13:55:51.4097621Z ** installing vignettes 2021-05-15T13:55:51.4126982Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:55:51.6727607Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:55:51.6996103Z ** testing if installed package can be loaded from final location 2021-05-15T13:55:51.9849997Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:55:51.9931574Z * DONE (Rcpp) 2021-05-15T13:55:52.2746916Z * installing *source* package ‘commonmark’ ... 2021-05-15T13:55:52.2782776Z ** package ‘commonmark’ successfully unpacked and MD5 sums checked 2021-05-15T13:55:52.2783948Z ** using staged installation 2021-05-15T13:55:52.2893894Z ** libs 2021-05-15T13:55:52.2943858Z rm -f cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o extensions.o init.o wrapper.o commonmark.so cmark/libstatcmark.a 2021-05-15T13:55:52.2976392Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions.c -o extensions.o 2021-05-15T13:55:52.3425415Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:55:52.3805102Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c wrapper.c -o wrapper.o 2021-05-15T13:55:52.4410249Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/cmark.c -o cmark/cmark.o 2021-05-15T13:55:52.4873513Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/node.c -o cmark/node.o 2021-05-15T13:55:52.7504337Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/iterator.c -o cmark/iterator.o 2021-05-15T13:55:52.8352031Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/blocks.c -o cmark/blocks.o 2021-05-15T13:55:53.2525979Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/inlines.c -o cmark/inlines.o 2021-05-15T13:55:53.9413717Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/scanners.c -o cmark/scanners.o 2021-05-15T13:55:55.5745054Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/utf8.c -o cmark/utf8.o 2021-05-15T13:55:58.6009757Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/buffer.c -o cmark/buffer.o 2021-05-15T13:55:58.7205822Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/references.c -o cmark/references.o 2021-05-15T13:55:58.7662293Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/render.c -o cmark/render.o 2021-05-15T13:55:58.8610858Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/man.c -o cmark/man.o 2021-05-15T13:55:59.7559602Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/xml.c -o cmark/xml.o 2021-05-15T13:55:59.7563248Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/html.c -o cmark/html.o 2021-05-15T13:55:59.7566199Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/commonmark.c -o cmark/commonmark.o 2021-05-15T13:55:59.7569161Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/latex.c -o cmark/latex.o 2021-05-15T13:55:59.7572113Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_href_e.c -o cmark/houdini_href_e.o 2021-05-15T13:55:59.7575455Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_html_e.c -o cmark/houdini_html_e.o 2021-05-15T13:55:59.7578639Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_html_u.c -o cmark/houdini_html_u.o 2021-05-15T13:55:59.7581609Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/cmark_ctype.c -o cmark/cmark_ctype.o 2021-05-15T13:55:59.7584612Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/arena.c -o cmark/arena.o 2021-05-15T13:55:59.7805284Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/linked_list.c -o cmark/linked_list.o 2021-05-15T13:55:59.8215722Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/plugin.c -o cmark/plugin.o 2021-05-15T13:55:59.8583685Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/registry.c -o cmark/registry.o 2021-05-15T13:55:59.9062949Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/syntax_extension.c -o cmark/syntax_extension.o 2021-05-15T13:55:59.9700366Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/plaintext.c -o cmark/plaintext.o 2021-05-15T13:56:00.0634496Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/footnotes.c -o cmark/footnotes.o 2021-05-15T13:56:00.1068529Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/map.c -o cmark/map.o 2021-05-15T13:56:00.1768831Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/autolink.c -o extensions/autolink.o 2021-05-15T13:56:00.3373383Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/core-extensions.c -o extensions/core-extensions.o 2021-05-15T13:56:00.3674112Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/ext_scanners.c -o extensions/ext_scanners.o 2021-05-15T13:56:00.4979176Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/strikethrough.c -o extensions/strikethrough.o 2021-05-15T13:56:00.5735849Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/table.c -o extensions/table.o 2021-05-15T13:56:00.8317450Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/tagfilter.c -o extensions/tagfilter.o 2021-05-15T13:56:00.8825862Z ar rcs cmark/libstatcmark.a cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o 2021-05-15T13:56:00.8959699Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o commonmark.so extensions.o init.o wrapper.o -Lcmark -lstatcmark -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:56:00.9378634Z installing to /home/runner/work/_temp/Library/00LOCK-commonmark/00new/commonmark/libs 2021-05-15T13:56:00.9444225Z ** R 2021-05-15T13:56:00.9470573Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:56:01.1707902Z ** help 2021-05-15T13:56:01.1828352Z *** installing help indices 2021-05-15T13:56:01.1984978Z ** building package indices 2021-05-15T13:56:01.3820455Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:56:01.5570992Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:56:01.5759381Z ** testing if installed package can be loaded from final location 2021-05-15T13:56:01.7459814Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:56:01.7465070Z * DONE (commonmark) 2021-05-15T13:56:01.9867657Z * installing *source* package ‘brew’ ... 2021-05-15T13:56:01.9869434Z ** using staged installation 2021-05-15T13:56:01.9951095Z ** R 2021-05-15T13:56:01.9977360Z ** inst 2021-05-15T13:56:02.0003169Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:56:02.3337465Z ** help 2021-05-15T13:56:02.3471441Z *** installing help indices 2021-05-15T13:56:02.3635283Z ** building package indices 2021-05-15T13:56:02.5502752Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:56:02.7273001Z ** testing if installed package can be loaded from final location 2021-05-15T13:56:02.8992890Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:56:02.9001054Z * DONE (brew) 2021-05-15T13:56:03.1185646Z * installing *source* package ‘sessioninfo’ ... 2021-05-15T13:56:03.1199330Z ** package ‘sessioninfo’ successfully unpacked and MD5 sums checked 2021-05-15T13:56:03.1200425Z ** using staged installation 2021-05-15T13:56:03.1375455Z ** R 2021-05-15T13:56:03.1414463Z ** inst 2021-05-15T13:56:03.1421189Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:56:03.5622274Z ** help 2021-05-15T13:56:03.5792193Z *** installing help indices 2021-05-15T13:56:03.5983796Z ** building package indices 2021-05-15T13:56:03.7930432Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:56:04.0156846Z ** testing if installed package can be loaded from final location 2021-05-15T13:56:04.2365787Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:56:04.2372381Z * DONE (sessioninfo) 2021-05-15T13:56:04.4425826Z * installing *source* package ‘prettyunits’ ... 2021-05-15T13:56:04.4435834Z ** package ‘prettyunits’ successfully unpacked and MD5 sums checked 2021-05-15T13:56:04.4436907Z ** using staged installation 2021-05-15T13:56:04.4541677Z ** R 2021-05-15T13:56:04.4579359Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:56:04.7617120Z ** help 2021-05-15T13:56:04.7882440Z *** installing help indices 2021-05-15T13:56:04.8079881Z ** building package indices 2021-05-15T13:56:04.9993534Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:56:05.1708129Z ** testing if installed package can be loaded from final location 2021-05-15T13:56:05.3438009Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:56:05.3439037Z * DONE (prettyunits) 2021-05-15T13:56:05.8614718Z * installing *source* package ‘vctrs’ ... 2021-05-15T13:56:05.8754421Z ** package ‘vctrs’ successfully unpacked and MD5 sums checked 2021-05-15T13:56:05.8755991Z ** using staged installation 2021-05-15T13:56:05.8924971Z ** libs 2021-05-15T13:56:05.8994013Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c altrep-rle.c -o altrep-rle.o 2021-05-15T13:56:06.0078544Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c arg-counter.c -o arg-counter.o 2021-05-15T13:56:06.0892208Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c arg.c -o arg.o 2021-05-15T13:56:06.1704978Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c bind.c -o bind.o 2021-05-15T13:56:06.3982723Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c c-unchop.c -o c-unchop.o 2021-05-15T13:56:06.5080701Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c c.c -o c.o 2021-05-15T13:56:06.6383746Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c callables.c -o callables.o 2021-05-15T13:56:06.6985025Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast-bare.c -o cast-bare.o 2021-05-15T13:56:06.7996213Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast-dispatch.c -o cast-dispatch.o 2021-05-15T13:56:06.8703738Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast.c -o cast.o 2021-05-15T13:56:06.9964919Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c compare.c -o compare.o 2021-05-15T13:56:07.1869951Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c complete.c -o complete.o 2021-05-15T13:56:07.2997985Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c conditions.c -o conditions.o 2021-05-15T13:56:07.3826880Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dictionary.c -o dictionary.o 2021-05-15T13:56:07.6177927Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dim.c -o dim.o 2021-05-15T13:56:07.6750626Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c equal.c -o equal.o 2021-05-15T13:56:08.0393789Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fields.c -o fields.o 2021-05-15T13:56:08.1265463Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fill.c -o fill.o 2021-05-15T13:56:08.2434863Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c group.c -o group.o 2021-05-15T13:56:08.3561681Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c growable.c -o growable.o 2021-05-15T13:56:08.4093780Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hash.c -o hash.o 2021-05-15T13:56:08.6280218Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:56:08.6876370Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c names.c -o names.o 2021-05-15T13:56:08.9912328Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-groups.c -o order-groups.o 2021-05-15T13:56:09.0615136Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-radix.c -o order-radix.o 2021-05-15T13:56:09.7368783Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-sortedness.c -o order-sortedness.o 2021-05-15T13:56:09.8814127Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-transform.c -o order-transform.o 2021-05-15T13:56:09.9488746Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-truelength.c -o order-truelength.o 2021-05-15T13:56:10.0189170Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c poly-op.c -o poly-op.o 2021-05-15T13:56:10.1689138Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c proxy-restore.c -o proxy-restore.o 2021-05-15T13:56:10.2731492Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c proxy.c -o proxy.o 2021-05-15T13:56:10.3927896Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ptype2-dispatch.c -o ptype2-dispatch.o 2021-05-15T13:56:10.4960544Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rep.c -o rep.o 2021-05-15T13:56:10.6223800Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c runs.c -o runs.o 2021-05-15T13:56:10.8566547Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c shape.c -o shape.o 2021-05-15T13:56:10.9493124Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size-common.c -o size-common.o 2021-05-15T13:56:11.0267521Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size.c -o size.o 2021-05-15T13:56:11.1326980Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-array.c -o slice-array.o 2021-05-15T13:56:11.5634981Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-assign-array.c -o slice-assign-array.o 2021-05-15T13:56:11.8952081Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-assign.c -o slice-assign.o 2021-05-15T13:56:12.1254473Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-chop.c -o slice-chop.o 2021-05-15T13:56:12.2838047Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice.c -o slice.o 2021-05-15T13:56:12.5430768Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c split.c -o split.o 2021-05-15T13:56:12.5963759Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c subscript-loc.c -o subscript-loc.o 2021-05-15T13:56:12.7805423Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c subscript.c -o subscript.o 2021-05-15T13:56:12.9183206Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c translate.c -o translate.o 2021-05-15T13:56:13.0175568Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-data-frame.c -o type-data-frame.o 2021-05-15T13:56:13.3477629Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-date-time.c -o type-date-time.o 2021-05-15T13:56:13.4927434Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-factor.c -o type-factor.o 2021-05-15T13:56:13.6168790Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-info.c -o type-info.o 2021-05-15T13:56:13.7164861Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-tibble.c -o type-tibble.o 2021-05-15T13:56:13.7873880Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type.c -o type.o 2021-05-15T13:56:13.9029095Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type2.c -o type2.o 2021-05-15T13:56:14.0271454Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typeof2-s3.c -o typeof2-s3.o 2021-05-15T13:56:14.1439664Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typeof2.c -o typeof2.o 2021-05-15T13:56:14.2394275Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c unspecified.c -o unspecified.o 2021-05-15T13:56:14.3102242Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils-dispatch.c -o utils-dispatch.o 2021-05-15T13:56:14.3778292Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils-rlang.c -o utils-rlang.o 2021-05-15T13:56:14.4288417Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-15T13:56:15.0228609Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-15T13:56:15.0621843Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o vctrs.so altrep-rle.o arg-counter.o arg.o bind.o c-unchop.o c.o callables.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o equal.o fields.o fill.o group.o growable.o hash.o init.o names.o order-groups.o order-radix.o order-sortedness.o order-transform.o order-truelength.o poly-op.o proxy-restore.o proxy.o ptype2-dispatch.o rep.o runs.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-tibble.o type.o type2.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils-rlang.o utils.o version.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:56:15.1218600Z installing to /home/runner/work/_temp/Library/00LOCK-vctrs/00new/vctrs/libs 2021-05-15T13:56:15.1231413Z ** R 2021-05-15T13:56:15.1564667Z ** inst 2021-05-15T13:56:15.1585115Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:56:17.7729974Z ** help 2021-05-15T13:56:18.0272449Z *** installing help indices 2021-05-15T13:56:18.2149819Z *** copying figures 2021-05-15T13:56:18.2158442Z ** building package indices 2021-05-15T13:56:18.5302192Z ** installing vignettes 2021-05-15T13:56:18.5489039Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:56:18.7752254Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:56:18.7938602Z ** testing if installed package can be loaded from final location 2021-05-15T13:56:19.0735606Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:56:19.0769686Z * DONE (vctrs) 2021-05-15T13:56:19.3616091Z * installing *source* package ‘processx’ ... 2021-05-15T13:56:19.3652569Z ** package ‘processx’ successfully unpacked and MD5 sums checked 2021-05-15T13:56:19.3653886Z ** using staged installation 2021-05-15T13:56:19.3825939Z ** libs 2021-05-15T13:56:19.3879569Z gcc -g -O2 -L/usr/local/lib -Wall tools/px.c -o tools/px 2021-05-15T13:56:19.5205524Z gcc -g -O2 -L/usr/local/lib supervisor/supervisor.c \ 2021-05-15T13:56:19.5207031Z supervisor/utils.c -o supervisor/supervisor 2021-05-15T13:56:19.6894811Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-15T13:56:19.7721732Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c client.c -o client.o 2021-05-15T13:56:19.8619237Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c errors.c -o errors.o 2021-05-15T13:56:19.9278939Z gcc -shared -L"/opt/R/devel/lib/R/lib" -L/usr/local/lib -o client.so base64.o client.o errors.o \ 2021-05-15T13:56:19.9280647Z -L"/opt/R/devel/lib/R/lib" -lR 2021-05-15T13:56:19.9507963Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:56:20.0204871Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c poll.c -o poll.o 2021-05-15T13:56:20.1182221Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c processx-connection.c -o processx-connection.o 2021-05-15T13:56:20.4415621Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c processx-vector.c -o processx-vector.o 2021-05-15T13:56:20.5278415Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c create-time.c -o create-time.o 2021-05-15T13:56:20.6365509Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/childlist.c -o unix/childlist.o 2021-05-15T13:56:20.7293572Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/connection.c -o unix/connection.o 2021-05-15T13:56:20.8042260Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/processx.c -o unix/processx.o 2021-05-15T13:56:21.1100404Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/sigchld.c -o unix/sigchld.o 2021-05-15T13:56:21.2049699Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/utils.c -o unix/utils.o 2021-05-15T13:56:21.3060502Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/named_pipe.c -o unix/named_pipe.o 2021-05-15T13:56:21.3603420Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cleancall.c -o cleancall.o 2021-05-15T13:56:21.4282151Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o processx.so init.o poll.o errors.o processx-connection.o processx-vector.o create-time.o base64.o unix/childlist.o unix/connection.o unix/processx.o unix/sigchld.o unix/utils.o unix/named_pipe.o cleancall.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:56:21.4579430Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-processx/00new/processx 2021-05-15T13:56:21.4588770Z ** R 2021-05-15T13:56:21.4720646Z ** inst 2021-05-15T13:56:21.4727718Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:56:23.0590920Z ** help 2021-05-15T13:56:23.1323989Z *** installing help indices 2021-05-15T13:56:23.1751294Z ** building package indices 2021-05-15T13:56:23.3979469Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:56:23.5881507Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:56:23.6138264Z ** testing if installed package can be loaded from final location 2021-05-15T13:56:23.8249332Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:56:23.8266557Z * DONE (processx) 2021-05-15T13:56:24.0782393Z * installing *source* package ‘markdown’ ... 2021-05-15T13:56:24.0807235Z ** package ‘markdown’ successfully unpacked and MD5 sums checked 2021-05-15T13:56:24.0808442Z ** using staged installation 2021-05-15T13:56:24.0957262Z ** libs 2021-05-15T13:56:24.1008563Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rbase64.c -o Rbase64.o 2021-05-15T13:56:24.1628927Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rinit.c -o Rinit.o 2021-05-15T13:56:24.2124471Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rmarkdown.c -o Rmarkdown.o 2021-05-15T13:56:24.3742721Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c autolink.c -o autolink.o 2021-05-15T13:56:24.4765464Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c buffer.c -o buffer.o 2021-05-15T13:56:24.5494921Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_href_e.c -o houdini_href_e.o 2021-05-15T13:56:24.5886595Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_html_e.c -o houdini_html_e.o 2021-05-15T13:56:24.6282864Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html.c -o html.o 2021-05-15T13:56:24.8308986Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html_smartypants.c -o html_smartypants.o 2021-05-15T13:56:24.9615021Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c markdown.c -o markdown.o 2021-05-15T13:56:25.9895197Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stack.c -o stack.o 2021-05-15T13:56:26.0358081Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o markdown.so Rbase64.o Rinit.o Rmarkdown.o autolink.o buffer.o houdini_href_e.o houdini_html_e.o html.o html_smartypants.o markdown.o stack.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:56:26.0698895Z installing to /home/runner/work/_temp/Library/00LOCK-markdown/00new/markdown/libs 2021-05-15T13:56:26.0702284Z ** R 2021-05-15T13:56:26.0756193Z ** inst 2021-05-15T13:56:26.0775488Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:56:26.4938100Z ** help 2021-05-15T13:56:26.5293670Z *** installing help indices 2021-05-15T13:56:26.5548125Z ** building package indices 2021-05-15T13:56:26.7577822Z ** installing vignettes 2021-05-15T13:56:26.7587689Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:56:26.9347441Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:56:26.9527442Z ** testing if installed package can be loaded from final location 2021-05-15T13:56:27.1288852Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:56:27.1299301Z * DONE (markdown) 2021-05-15T13:56:27.3377446Z * installing *source* package ‘highr’ ... 2021-05-15T13:56:27.3386977Z ** package ‘highr’ successfully unpacked and MD5 sums checked 2021-05-15T13:56:27.3388018Z ** using staged installation 2021-05-15T13:56:27.3533382Z ** R 2021-05-15T13:56:27.3567013Z ** inst 2021-05-15T13:56:27.3577869Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:56:27.6860906Z ** help 2021-05-15T13:56:27.6983723Z *** installing help indices 2021-05-15T13:56:27.7143331Z ** building package indices 2021-05-15T13:56:27.8972360Z ** installing vignettes 2021-05-15T13:56:27.9022754Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:56:28.0736778Z ** testing if installed package can be loaded from final location 2021-05-15T13:56:28.2479314Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:56:28.2480809Z * DONE (highr) 2021-05-15T13:56:28.5188324Z * installing *source* package ‘stringr’ ... 2021-05-15T13:56:28.5221250Z ** package ‘stringr’ successfully unpacked and MD5 sums checked 2021-05-15T13:56:28.5222430Z ** using staged installation 2021-05-15T13:56:28.5387817Z ** R 2021-05-15T13:56:28.5462283Z ** data 2021-05-15T13:56:28.5465982Z *** moving datasets to lazyload DB 2021-05-15T13:56:28.5635279Z ** inst 2021-05-15T13:56:28.5648611Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:56:29.0539383Z ** help 2021-05-15T13:56:29.1288777Z *** installing help indices 2021-05-15T13:56:29.1824843Z *** copying figures 2021-05-15T13:56:29.1826920Z ** building package indices 2021-05-15T13:56:29.4133556Z ** installing vignettes 2021-05-15T13:56:29.4191131Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:56:29.6078574Z ** testing if installed package can be loaded from final location 2021-05-15T13:56:29.7960077Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:56:29.7969496Z * DONE (stringr) 2021-05-15T13:56:30.0094588Z * installing *source* package ‘rversions’ ... 2021-05-15T13:56:30.0105639Z ** package ‘rversions’ successfully unpacked and MD5 sums checked 2021-05-15T13:56:30.0106626Z ** using staged installation 2021-05-15T13:56:30.0245321Z ** R 2021-05-15T13:56:30.0281308Z ** inst 2021-05-15T13:56:30.0288572Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:56:30.3433828Z ** help 2021-05-15T13:56:30.3622013Z *** installing help indices 2021-05-15T13:56:30.3820970Z *** copying figures 2021-05-15T13:56:30.3824133Z ** building package indices 2021-05-15T13:56:30.5734511Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:56:30.7723202Z ** testing if installed package can be loaded from final location 2021-05-15T13:56:30.9688797Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:56:30.9694539Z * DONE (rversions) 2021-05-15T13:56:31.3731431Z * installing *source* package ‘pillar’ ... 2021-05-15T13:56:31.3830926Z ** package ‘pillar’ successfully unpacked and MD5 sums checked 2021-05-15T13:56:31.3832202Z ** using staged installation 2021-05-15T13:56:31.4008107Z ** R 2021-05-15T13:56:31.4180632Z ** inst 2021-05-15T13:56:31.4214058Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:56:33.1207698Z ** help 2021-05-15T13:56:33.2121020Z *** installing help indices 2021-05-15T13:56:33.2754116Z *** copying figures 2021-05-15T13:56:33.2759147Z ** building package indices 2021-05-15T13:56:33.5068640Z ** installing vignettes 2021-05-15T13:56:33.5149834Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:56:33.7945901Z ** testing if installed package can be loaded from final location 2021-05-15T13:56:34.1061080Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:56:34.1085043Z * DONE (pillar) 2021-05-15T13:56:34.3697621Z * installing *source* package ‘callr’ ... 2021-05-15T13:56:34.3724324Z ** package ‘callr’ successfully unpacked and MD5 sums checked 2021-05-15T13:56:34.3725507Z ** using staged installation 2021-05-15T13:56:34.3860293Z ** R 2021-05-15T13:56:34.3989723Z ** inst 2021-05-15T13:56:34.3997024Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:56:37.6230853Z ** help 2021-05-15T13:56:37.7402103Z *** installing help indices 2021-05-15T13:56:37.8107161Z ** building package indices 2021-05-15T13:56:38.0551447Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:56:38.2534295Z ** testing if installed package can be loaded from final location 2021-05-15T13:56:38.5080681Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:56:38.5114275Z * DONE (callr) 2021-05-15T13:56:38.9643073Z * installing *source* package ‘knitr’ ... 2021-05-15T13:56:38.9751520Z ** package ‘knitr’ successfully unpacked and MD5 sums checked 2021-05-15T13:56:38.9754029Z ** using staged installation 2021-05-15T13:56:39.0088758Z ** R 2021-05-15T13:56:39.0450753Z ** demo 2021-05-15T13:56:39.0456115Z ** inst 2021-05-15T13:56:39.0557217Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:56:43.2890875Z ** help 2021-05-15T13:56:43.4762168Z *** installing help indices 2021-05-15T13:56:43.5995872Z ** building package indices 2021-05-15T13:56:43.8897736Z ** installing vignettes 2021-05-15T13:56:43.8963926Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:56:44.0875937Z ** testing if installed package can be loaded from final location 2021-05-15T13:56:44.3682945Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:56:44.3736526Z * DONE (knitr) 2021-05-15T13:56:44.5792932Z * installing *source* package ‘xopen’ ... 2021-05-15T13:56:44.5801627Z ** package ‘xopen’ successfully unpacked and MD5 sums checked 2021-05-15T13:56:44.5803679Z ** using staged installation 2021-05-15T13:56:44.5946649Z ** R 2021-05-15T13:56:44.5971057Z ** inst 2021-05-15T13:56:44.5979045Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:56:44.8302274Z ** help 2021-05-15T13:56:44.8413972Z *** installing help indices 2021-05-15T13:56:44.8630686Z ** building package indices 2021-05-15T13:56:45.0426040Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:56:45.2141838Z ** testing if installed package can be loaded from final location 2021-05-15T13:56:45.3869484Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:56:45.3874917Z * DONE (xopen) 2021-05-15T13:56:45.7921664Z * installing *source* package ‘tibble’ ... 2021-05-15T13:56:45.8015681Z ** package ‘tibble’ successfully unpacked and MD5 sums checked 2021-05-15T13:56:45.8016916Z ** using staged installation 2021-05-15T13:56:45.8214647Z ** libs 2021-05-15T13:56:45.8261475Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c attributes.c -o attributes.o 2021-05-15T13:56:45.8709482Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-05-15T13:56:45.9340098Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:56:45.9702717Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c matrixToDataFrame.c -o matrixToDataFrame.o 2021-05-15T13:56:46.0636191Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:56:46.0860991Z installing to /home/runner/work/_temp/Library/00LOCK-tibble/00new/tibble/libs 2021-05-15T13:56:46.0873846Z ** R 2021-05-15T13:56:46.1030764Z ** inst 2021-05-15T13:56:46.1060915Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:56:47.9165654Z ** help 2021-05-15T13:56:47.9874819Z *** installing help indices 2021-05-15T13:56:48.0355732Z *** copying figures 2021-05-15T13:56:48.0360596Z ** building package indices 2021-05-15T13:56:48.2571520Z ** installing vignettes 2021-05-15T13:56:48.2642790Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:56:48.5973906Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:56:48.6149132Z ** testing if installed package can be loaded from final location 2021-05-15T13:56:48.9656219Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:56:48.9679416Z * DONE (tibble) 2021-05-15T13:56:49.2119450Z * installing *source* package ‘pkgbuild’ ... 2021-05-15T13:56:49.2138568Z ** package ‘pkgbuild’ successfully unpacked and MD5 sums checked 2021-05-15T13:56:49.2140111Z ** using staged installation 2021-05-15T13:56:49.2279766Z ** R 2021-05-15T13:56:49.2355765Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:56:50.4057558Z ** help 2021-05-15T13:56:50.4403640Z *** installing help indices 2021-05-15T13:56:50.4746802Z ** building package indices 2021-05-15T13:56:50.6811393Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:56:50.9341824Z ** testing if installed package can be loaded from final location 2021-05-15T13:56:51.2035647Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:56:51.2049828Z * DONE (pkgbuild) 2021-05-15T13:56:51.5815548Z * installing *source* package ‘roxygen2’ ... 2021-05-15T13:56:51.5886942Z ** package ‘roxygen2’ successfully unpacked and MD5 sums checked 2021-05-15T13:56:51.5888213Z ** using staged installation 2021-05-15T13:56:51.6073793Z ** libs 2021-05-15T13:56:51.6125790Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-15T13:56:55.5886459Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c escapeExamples.cpp -o escapeExamples.o 2021-05-15T13:56:58.2112492Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c isComplete.cpp -o isComplete.o 2021-05-15T13:57:01.0597256Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c leadingSpaces.cpp -o leadingSpaces.o 2021-05-15T13:57:03.9617802Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c parser2.cpp -o parser2.o 2021-05-15T13:57:08.5248099Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c wrapUsage.cpp -o wrapUsage.o 2021-05-15T13:57:11.5415903Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o roxygen2.so RcppExports.o escapeExamples.o isComplete.o leadingSpaces.o parser2.o wrapUsage.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:57:11.6385789Z installing to /home/runner/work/_temp/Library/00LOCK-roxygen2/00new/roxygen2/libs 2021-05-15T13:57:11.6429741Z ** R 2021-05-15T13:57:11.6721496Z ** inst 2021-05-15T13:57:11.6739016Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:57:15.3804562Z ** help 2021-05-15T13:57:15.4488553Z *** installing help indices 2021-05-15T13:57:15.4986399Z *** copying figures 2021-05-15T13:57:15.4988663Z ** building package indices 2021-05-15T13:57:15.7222426Z ** installing vignettes 2021-05-15T13:57:15.7317954Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:57:16.0676879Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:57:16.0872540Z ** testing if installed package can be loaded from final location 2021-05-15T13:57:16.4893687Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:57:16.4934648Z * DONE (roxygen2) 2021-05-15T13:57:16.7063284Z * installing *source* package ‘rematch2’ ... 2021-05-15T13:57:16.7073697Z ** package ‘rematch2’ successfully unpacked and MD5 sums checked 2021-05-15T13:57:16.7074772Z ** using staged installation 2021-05-15T13:57:16.7204126Z ** R 2021-05-15T13:57:16.7243877Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:57:17.1929339Z ** help 2021-05-15T13:57:17.2223404Z *** installing help indices 2021-05-15T13:57:17.2429923Z ** building package indices 2021-05-15T13:57:17.4328398Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:57:17.7671326Z ** testing if installed package can be loaded from final location 2021-05-15T13:57:18.1045060Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:57:18.1050403Z * DONE (rematch2) 2021-05-15T13:57:18.3564100Z * installing *source* package ‘rcmdcheck’ ... 2021-05-15T13:57:18.3586741Z ** package ‘rcmdcheck’ successfully unpacked and MD5 sums checked 2021-05-15T13:57:18.3587904Z ** using staged installation 2021-05-15T13:57:18.3719844Z ** R 2021-05-15T13:57:18.3793223Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:57:19.5083610Z ** help 2021-05-15T13:57:19.5430587Z *** installing help indices 2021-05-15T13:57:19.5707031Z ** building package indices 2021-05-15T13:57:19.7691823Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:57:20.0397303Z ** testing if installed package can be loaded from final location 2021-05-15T13:57:20.3258675Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:57:20.3271785Z * DONE (rcmdcheck) 2021-05-15T13:57:20.5618002Z * installing *source* package ‘waldo’ ... 2021-05-15T13:57:20.5635828Z ** package ‘waldo’ successfully unpacked and MD5 sums checked 2021-05-15T13:57:20.5636989Z ** using staged installation 2021-05-15T13:57:20.5771864Z ** R 2021-05-15T13:57:20.5827153Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:57:21.2498662Z ** help 2021-05-15T13:57:21.2636298Z *** installing help indices 2021-05-15T13:57:21.2808966Z *** copying figures 2021-05-15T13:57:21.2811138Z ** building package indices 2021-05-15T13:57:21.4667063Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:57:21.6965854Z ** testing if installed package can be loaded from final location 2021-05-15T13:57:21.9317731Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:57:21.9325728Z * DONE (waldo) 2021-05-15T13:57:22.4142148Z * installing *source* package ‘testthat’ ... 2021-05-15T13:57:22.4260304Z ** package ‘testthat’ successfully unpacked and MD5 sums checked 2021-05-15T13:57:22.4262425Z ** using staged installation 2021-05-15T13:57:22.4471956Z ** libs 2021-05-15T13:57:22.4520578Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:57:22.4962511Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o 2021-05-15T13:57:22.5440898Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-catch.cpp -o test-catch.o 2021-05-15T13:57:23.2719615Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-example.cpp -o test-example.o 2021-05-15T13:57:23.8406825Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-runner.cpp -o test-runner.o 2021-05-15T13:57:39.9875535Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o testthat.so init.o reassign.o test-catch.o test-example.o test-runner.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:57:40.1575192Z installing to /home/runner/work/_temp/Library/00LOCK-testthat/00new/testthat/libs 2021-05-15T13:57:40.1684302Z ** R 2021-05-15T13:57:40.2022363Z ** inst 2021-05-15T13:57:40.2054547Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:57:49.9712066Z ** help 2021-05-15T13:57:50.1877261Z *** installing help indices 2021-05-15T13:57:50.3567950Z *** copying figures 2021-05-15T13:57:50.3572384Z ** building package indices 2021-05-15T13:57:50.6674134Z ** installing vignettes 2021-05-15T13:57:50.6791058Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:57:50.8850974Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:57:50.9077407Z ** testing if installed package can be loaded from final location 2021-05-15T13:57:51.3410452Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:57:51.3494345Z * DONE (testthat) 2021-05-15T13:57:51.7063532Z * installing *source* package ‘devtools’ ... 2021-05-15T13:57:51.7122163Z ** package ‘devtools’ successfully unpacked and MD5 sums checked 2021-05-15T13:57:51.7125581Z ** using staged installation 2021-05-15T13:57:51.7399902Z ** R 2021-05-15T13:57:51.7530926Z ** inst 2021-05-15T13:57:51.7542340Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:57:53.4666943Z ** help 2021-05-15T13:57:53.5732620Z *** installing help indices 2021-05-15T13:57:53.6455166Z *** copying figures 2021-05-15T13:57:53.6456286Z ** building package indices 2021-05-15T13:57:53.8918047Z ** installing vignettes 2021-05-15T13:57:53.8993295Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:57:54.5517097Z ** testing if installed package can be loaded from final location 2021-05-15T13:57:55.2505613Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:57:55.2525882Z * DONE (devtools) 2021-05-15T13:57:55.2640957Z 2021-05-15T13:57:55.2643194Z The downloaded source packages are in 2021-05-15T13:57:55.2646142Z ‘/tmp/RtmpjWHLac/downloaded_packages’ 2021-05-15T13:57:55.3573133Z Downloading GitHub repo muschellij2/desc@HEAD 2021-05-15T13:57:56.0721218Z 2021-05-15T13:57:56.3572264Z 2021-05-15T13:57:56.3574227Z checking for file ‘/tmp/RtmpjWHLac/remotes72e4eed21b1/muschellij2-desc-7be86f2/DESCRIPTION’ ... 2021-05-15T13:57:56.3612398Z 2021-05-15T13:57:56.3614190Z ✔ checking for file ‘/tmp/RtmpjWHLac/remotes72e4eed21b1/muschellij2-desc-7be86f2/DESCRIPTION’ 2021-05-15T13:57:56.3699932Z 2021-05-15T13:57:56.3700387Z 2021-05-15T13:57:56.3701104Z ─ preparing ‘desc’: 2021-05-15T13:57:56.3701384Z 2021-05-15T13:57:56.3701678Z 2021-05-15T13:57:56.3802908Z checking DESCRIPTION meta-information ... 2021-05-15T13:57:56.3822472Z 2021-05-15T13:57:56.3824465Z ✔ checking DESCRIPTION meta-information 2021-05-15T13:57:56.4455747Z 2021-05-15T13:57:56.4479627Z 2021-05-15T13:57:56.4482249Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-15T13:57:56.4490348Z 2021-05-15T13:57:56.4622170Z 2021-05-15T13:57:56.4624527Z ─ checking for empty or unneeded directories 2021-05-15T13:57:56.4629117Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-15T13:57:56.4636332Z 2021-05-15T13:57:56.4654210Z 2021-05-15T13:57:56.4656028Z ─ building ‘desc_1.2.0.9000.tar.gz’ 2021-05-15T13:57:56.5606915Z 2021-05-15T13:57:56.5609662Z 2021-05-15T13:57:56.5611115Z 2021-05-15T13:57:56.5709649Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-15T13:57:56.5710434Z (as ‘lib’ is unspecified) 2021-05-15T13:57:56.8619574Z * installing *source* package ‘desc’ ... 2021-05-15T13:57:56.8650496Z ** using staged installation 2021-05-15T13:57:56.8809858Z ** R 2021-05-15T13:57:56.8933980Z ** inst 2021-05-15T13:57:56.8949021Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:57:58.3914829Z ** help 2021-05-15T13:57:58.5161365Z *** installing help indices 2021-05-15T13:57:58.6050122Z ** building package indices 2021-05-15T13:57:58.8658894Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:57:59.0453033Z ** testing if installed package can be loaded from final location 2021-05-15T13:57:59.2506953Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:57:59.2521809Z * DONE (desc) 2021-05-15T13:57:59.4424191Z 2021-05-15T13:57:59.4425302Z 2021-05-15T13:57:59.4442226Z checking for file ‘/tmp/RtmpjWHLac/remotes72e4317ebc2a/muschellij2-ghtravis-0b26809/DESCRIPTION’ ... 2021-05-15T13:57:59.4462700Z 2021-05-15T13:57:59.4464513Z ✔ checking for file ‘/tmp/RtmpjWHLac/remotes72e4317ebc2a/muschellij2-ghtravis-0b26809/DESCRIPTION’ 2021-05-15T13:57:59.4537176Z 2021-05-15T13:57:59.4554622Z 2021-05-15T13:57:59.4555672Z ─ preparing ‘ghtravis’: 2021-05-15T13:57:59.4556189Z 2021-05-15T13:57:59.4556648Z 2021-05-15T13:57:59.4631713Z checking DESCRIPTION meta-information ... 2021-05-15T13:57:59.4650329Z 2021-05-15T13:57:59.4652221Z ✔ checking DESCRIPTION meta-information 2021-05-15T13:57:59.5005776Z 2021-05-15T13:57:59.5027827Z 2021-05-15T13:57:59.5030054Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-15T13:57:59.5037409Z 2021-05-15T13:57:59.5055751Z 2021-05-15T13:57:59.5057838Z ─ checking for empty or unneeded directories 2021-05-15T13:57:59.5060533Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-15T13:57:59.5149924Z 2021-05-15T13:57:59.5168925Z 2021-05-15T13:57:59.5170863Z ─ building ‘ghtravis_0.15.1.tar.gz’ 2021-05-15T13:57:59.5368395Z 2021-05-15T13:57:59.5370720Z 2021-05-15T13:57:59.5372182Z 2021-05-15T13:57:59.5671632Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-15T13:57:59.5672652Z (as ‘lib’ is unspecified) 2021-05-15T13:57:59.7979154Z * installing *source* package ‘ghtravis’ ... 2021-05-15T13:57:59.7980843Z ** using staged installation 2021-05-15T13:57:59.8176843Z ** R 2021-05-15T13:57:59.8203778Z ** inst 2021-05-15T13:57:59.8212227Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:58:01.0264845Z ** help 2021-05-15T13:58:01.0824453Z *** installing help indices 2021-05-15T13:58:01.1238504Z ** building package indices 2021-05-15T13:58:01.3432387Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:58:01.9444419Z ** testing if installed package can be loaded from final location 2021-05-15T13:58:02.5912761Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:58:02.5923300Z * DONE (ghtravis) 2021-05-15T13:58:02.6004842Z Using github PAT from envvar GITHUB_PAT 2021-05-15T13:58:02.7732958Z Downloading GitHub repo muschellij2/aghast@HEAD 2021-05-15T13:58:03.6371997Z 2021-05-15T13:58:03.6374076Z tidyselect (NA -> 1.1.1) [CRAN] 2021-05-15T13:58:03.6375114Z Installing 5 packages: tidyselect, generics, cpp11, dplyr, tidyr 2021-05-15T13:58:03.6376502Z generics (NA -> 0.1.0) [CRAN] 2021-05-15T13:58:03.6377820Z cpp11 (NA -> 0.2.7) [CRAN] 2021-05-15T13:58:03.6378450Z dplyr (NA -> 1.0.6) [CRAN] 2021-05-15T13:58:03.6379086Z tidyr (NA -> 1.1.3) [CRAN] 2021-05-15T13:58:03.6383036Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-15T13:58:03.6384201Z (as ‘lib’ is unspecified) 2021-05-15T13:58:17.3971202Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyselect_1.1.1.tar.gz' 2021-05-15T13:58:17.6773588Z Content type 'binary/octet-stream' length 92124 bytes (89 KB) 2021-05-15T13:58:17.6869715Z ================================================== 2021-05-15T13:58:17.6870567Z downloaded 89 KB 2021-05-15T13:58:17.6871024Z 2021-05-15T13:58:17.6905481Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/generics_0.1.0.tar.gz' 2021-05-15T13:58:17.9594662Z Content type 'binary/octet-stream' length 118869 bytes (116 KB) 2021-05-15T13:58:17.9707739Z ================================================== 2021-05-15T13:58:17.9708727Z downloaded 116 KB 2021-05-15T13:58:17.9709336Z 2021-05-15T13:58:17.9745896Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cpp11_0.2.7.tar.gz' 2021-05-15T13:58:18.2563117Z Content type 'binary/octet-stream' length 200157 bytes (195 KB) 2021-05-15T13:58:18.2729534Z ================================================== 2021-05-15T13:58:18.2730421Z downloaded 195 KB 2021-05-15T13:58:18.2730957Z 2021-05-15T13:58:18.2771349Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/dplyr_1.0.6.tar.gz' 2021-05-15T13:58:18.5445562Z Content type 'binary/octet-stream' length 954544 bytes (932 KB) 2021-05-15T13:58:18.5745680Z ================================================== 2021-05-15T13:58:18.5746709Z downloaded 932 KB 2021-05-15T13:58:18.5747166Z 2021-05-15T13:58:18.5781275Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyr_1.1.3.tar.gz' 2021-05-15T13:58:18.8461154Z Content type 'binary/octet-stream' length 706784 bytes (690 KB) 2021-05-15T13:58:18.8703837Z ================================================== 2021-05-15T13:58:18.8704360Z downloaded 690 KB 2021-05-15T13:58:18.8704627Z 2021-05-15T13:58:19.1331412Z * installing *source* package ‘tidyselect’ ... 2021-05-15T13:58:19.1361242Z ** package ‘tidyselect’ successfully unpacked and MD5 sums checked 2021-05-15T13:58:19.1362461Z ** using staged installation 2021-05-15T13:58:19.1522884Z ** R 2021-05-15T13:58:19.1605050Z ** inst 2021-05-15T13:58:19.1617681Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:58:20.0928076Z ** help 2021-05-15T13:58:20.1467307Z *** installing help indices 2021-05-15T13:58:20.1873445Z ** building package indices 2021-05-15T13:58:20.3977571Z ** installing vignettes 2021-05-15T13:58:20.4008636Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:58:20.6515791Z ** testing if installed package can be loaded from final location 2021-05-15T13:58:20.9140500Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:58:20.9152830Z * DONE (tidyselect) 2021-05-15T13:58:21.1819802Z * installing *source* package ‘generics’ ... 2021-05-15T13:58:21.1848331Z ** package ‘generics’ successfully unpacked and MD5 sums checked 2021-05-15T13:58:21.1849642Z ** using staged installation 2021-05-15T13:58:21.1979349Z ** R 2021-05-15T13:58:21.2030004Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:58:21.4927549Z ** help 2021-05-15T13:58:21.6059550Z *** installing help indices 2021-05-15T13:58:21.6484556Z ** building package indices 2021-05-15T13:58:21.8719557Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:58:22.0428698Z ** testing if installed package can be loaded from final location 2021-05-15T13:58:22.2177298Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:58:22.2178063Z * DONE (generics) 2021-05-15T13:58:22.4750810Z * installing *source* package ‘cpp11’ ... 2021-05-15T13:58:22.4784058Z ** package ‘cpp11’ successfully unpacked and MD5 sums checked 2021-05-15T13:58:22.4785203Z ** using staged installation 2021-05-15T13:58:22.4936100Z ** R 2021-05-15T13:58:22.4977278Z ** inst 2021-05-15T13:58:22.5005461Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:58:22.8857681Z ** help 2021-05-15T13:58:22.9058100Z *** installing help indices 2021-05-15T13:58:22.9247378Z ** building package indices 2021-05-15T13:58:23.1084654Z ** installing vignettes 2021-05-15T13:58:23.1138633Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:58:23.2843911Z ** testing if installed package can be loaded from final location 2021-05-15T13:58:23.4527512Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:58:23.4536807Z * DONE (cpp11) 2021-05-15T13:58:23.9298505Z * installing *source* package ‘dplyr’ ... 2021-05-15T13:58:23.9421484Z ** package ‘dplyr’ successfully unpacked and MD5 sums checked 2021-05-15T13:58:23.9423755Z ** using staged installation 2021-05-15T13:58:23.9631279Z ** libs 2021-05-15T13:58:23.9679807Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c chop.cpp -o chop.o 2021-05-15T13:58:24.0998222Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c filter.cpp -o filter.o 2021-05-15T13:58:24.2639607Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c funs.cpp -o funs.o 2021-05-15T13:58:24.3796058Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c group_by.cpp -o group_by.o 2021-05-15T13:58:24.8979464Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c group_data.cpp -o group_data.o 2021-05-15T13:58:25.0001387Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c imports.cpp -o imports.o 2021-05-15T13:58:25.1072353Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.cpp -o init.o 2021-05-15T13:58:25.2153668Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mask.cpp -o mask.o 2021-05-15T13:58:25.3405296Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mutate.cpp -o mutate.o 2021-05-15T13:58:25.4598639Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c slice.cpp -o slice.o 2021-05-15T13:58:25.5521695Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c summarise.cpp -o summarise.o 2021-05-15T13:58:25.7104085Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o dplyr.so chop.o filter.o funs.o group_by.o group_data.o imports.o init.o mask.o mutate.o slice.o summarise.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:58:25.7738781Z installing to /home/runner/work/_temp/Library/00LOCK-dplyr/00new/dplyr/libs 2021-05-15T13:58:25.7753344Z ** R 2021-05-15T13:58:25.8193362Z ** data 2021-05-15T13:58:25.8198942Z *** moving datasets to lazyload DB 2021-05-15T13:58:25.9134403Z ** inst 2021-05-15T13:58:25.9165734Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:58:30.3524614Z ** help 2021-05-15T13:58:30.8609499Z *** installing help indices 2021-05-15T13:58:31.1054165Z *** copying figures 2021-05-15T13:58:31.1064334Z ** building package indices 2021-05-15T13:58:31.4569188Z ** installing vignettes 2021-05-15T13:58:31.4699826Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:58:31.9341174Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:58:31.9520508Z ** testing if installed package can be loaded from final location 2021-05-15T13:58:32.4930500Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:58:32.4978847Z * DONE (dplyr) 2021-05-15T13:58:32.8433297Z * installing *source* package ‘tidyr’ ... 2021-05-15T13:58:32.8505234Z ** package ‘tidyr’ successfully unpacked and MD5 sums checked 2021-05-15T13:58:32.8506866Z ** using staged installation 2021-05-15T13:58:32.8682496Z ** libs 2021-05-15T13:58:32.8740012Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c cpp11.cpp -o cpp11.o 2021-05-15T13:58:33.7070575Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c fill.cpp -o fill.o 2021-05-15T13:58:34.0229168Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c melt.cpp -o melt.o 2021-05-15T13:58:35.4605752Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c simplifyPieces.cpp -o simplifyPieces.o 2021-05-15T13:58:36.7048509Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tidyr.so cpp11.o fill.o melt.o simplifyPieces.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:58:36.7832898Z installing to /home/runner/work/_temp/Library/00LOCK-tidyr/00new/tidyr/libs 2021-05-15T13:58:36.7857418Z ** R 2021-05-15T13:58:36.8010615Z ** data 2021-05-15T13:58:36.8022823Z *** moving datasets to lazyload DB 2021-05-15T13:58:36.9841151Z ** inst 2021-05-15T13:58:36.9862441Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:58:38.5249960Z ** help 2021-05-15T13:58:38.6297543Z *** installing help indices 2021-05-15T13:58:38.6986984Z *** copying figures 2021-05-15T13:58:38.6991371Z ** building package indices 2021-05-15T13:58:38.9261209Z ** installing vignettes 2021-05-15T13:58:38.9367905Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:58:39.3693168Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:58:39.3870802Z ** testing if installed package can be loaded from final location 2021-05-15T13:58:39.8799026Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:58:39.8817067Z * DONE (tidyr) 2021-05-15T13:58:39.8938954Z 2021-05-15T13:58:39.8940390Z The downloaded source packages are in 2021-05-15T13:58:39.8941813Z ‘/tmp/RtmpjWHLac/downloaded_packages’ 2021-05-15T13:58:40.0724073Z 2021-05-15T13:58:40.0737389Z checking for file ‘/tmp/RtmpjWHLac/remotes72e46e293a17/muschellij2-aghast-0c3b853/DESCRIPTION’ ... 2021-05-15T13:58:40.0751913Z 2021-05-15T13:58:40.0753563Z ✔ checking for file ‘/tmp/RtmpjWHLac/remotes72e46e293a17/muschellij2-aghast-0c3b853/DESCRIPTION’ 2021-05-15T13:58:40.0836031Z 2021-05-15T13:58:40.0836439Z 2021-05-15T13:58:40.0837171Z ─ preparing ‘aghast’: 2021-05-15T13:58:40.0837458Z 2021-05-15T13:58:40.0837737Z 2021-05-15T13:58:40.0940306Z checking DESCRIPTION meta-information ... 2021-05-15T13:58:40.0940832Z 2021-05-15T13:58:40.0941512Z ✔ checking DESCRIPTION meta-information 2021-05-15T13:58:40.1219360Z 2021-05-15T13:58:40.1219977Z 2021-05-15T13:58:40.1221310Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-15T13:58:40.1221845Z 2021-05-15T13:58:40.1227749Z 2021-05-15T13:58:40.1230263Z ─ checking for empty or unneeded directories 2021-05-15T13:58:40.1233368Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-15T13:58:40.1250285Z 2021-05-15T13:58:40.1270541Z 2021-05-15T13:58:40.1272972Z ─ building ‘aghast_0.2.1.tar.gz’ 2021-05-15T13:58:40.1357032Z 2021-05-15T13:58:40.1361364Z 2021-05-15T13:58:40.1363028Z 2021-05-15T13:58:40.1431320Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-15T13:58:40.1432365Z (as ‘lib’ is unspecified) 2021-05-15T13:58:40.3546819Z * installing *source* package ‘aghast’ ... 2021-05-15T13:58:40.3549352Z ** using staged installation 2021-05-15T13:58:40.3707484Z ** R 2021-05-15T13:58:40.3761462Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:58:40.8057617Z ** help 2021-05-15T13:58:40.8334136Z *** installing help indices 2021-05-15T13:58:40.8552630Z ** building package indices 2021-05-15T13:58:41.0507834Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:58:41.2289795Z ** testing if installed package can be loaded from final location 2021-05-15T13:58:41.4075289Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:58:41.4081838Z * DONE (aghast) 2021-05-15T13:58:41.4162325Z Installing 1 packages: covr 2021-05-15T13:58:41.4168517Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-15T13:58:41.4169384Z (as ‘lib’ is unspecified) 2021-05-15T13:58:55.1415569Z also installing the dependencies ‘lazyeval’, ‘rex’ 2021-05-15T13:58:55.1416798Z 2021-05-15T13:58:55.1422362Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lazyeval_0.2.2.tar.gz' 2021-05-15T13:58:55.5274215Z Content type 'application/x-tar' length 83462 bytes (81 KB) 2021-05-15T13:58:55.5337380Z ================================================== 2021-05-15T13:58:55.5338148Z downloaded 81 KB 2021-05-15T13:58:55.5338604Z 2021-05-15T13:58:55.5370462Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rex_1.2.0.tar.gz' 2021-05-15T13:58:55.9225300Z Content type 'binary/octet-stream' length 91701 bytes (89 KB) 2021-05-15T13:58:55.9299654Z ================================================== 2021-05-15T13:58:55.9300997Z downloaded 89 KB 2021-05-15T13:58:55.9301729Z 2021-05-15T13:58:55.9337010Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/covr_3.5.1.tar.gz' 2021-05-15T13:58:56.2012379Z Content type 'binary/octet-stream' length 147467 bytes (144 KB) 2021-05-15T13:58:56.2133368Z ================================================== 2021-05-15T13:58:56.2133897Z downloaded 144 KB 2021-05-15T13:58:56.2134168Z 2021-05-15T13:58:56.4676492Z * installing *source* package ‘lazyeval’ ... 2021-05-15T13:58:56.4702168Z ** package ‘lazyeval’ successfully unpacked and MD5 sums checked 2021-05-15T13:58:56.4703340Z ** using staged installation 2021-05-15T13:58:56.4823142Z ** libs 2021-05-15T13:58:56.4868581Z 2021-05-15T13:58:56.4869971Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c expr.c -o expr.o 2021-05-15T13:58:56.5452530Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-15T13:58:56.5809918Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c interp.c -o interp.o 2021-05-15T13:58:56.6388447Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c lazy.c -o lazy.o 2021-05-15T13:58:56.7118022Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c name.c -o name.o 2021-05-15T13:58:56.7720050Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-15T13:58:56.8405694Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o lazyeval.so expr.o init.o interp.o lazy.o name.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:58:56.8659441Z installing to /home/runner/work/_temp/Library/00LOCK-lazyeval/00new/lazyeval/libs 2021-05-15T13:58:56.8660921Z ** R 2021-05-15T13:58:56.8715315Z ** inst 2021-05-15T13:58:56.8721980Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:58:57.8058053Z ** help 2021-05-15T13:58:57.8059264Z *** installing help indices 2021-05-15T13:58:57.8060065Z ** building package indices 2021-05-15T13:58:57.8061007Z ** installing vignettes 2021-05-15T13:58:57.8061846Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:58:57.8444394Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:58:57.8618233Z ** testing if installed package can be loaded from final location 2021-05-15T13:58:58.0404925Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:58:58.0413806Z * DONE (lazyeval) 2021-05-15T13:58:58.2854897Z * installing *source* package ‘rex’ ... 2021-05-15T13:58:58.2878395Z ** package ‘rex’ successfully unpacked and MD5 sums checked 2021-05-15T13:58:58.2879604Z ** using staged installation 2021-05-15T13:58:58.3015644Z ** R 2021-05-15T13:58:58.3077432Z ** inst 2021-05-15T13:58:58.3090036Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:58:58.7907128Z ** help 2021-05-15T13:58:58.8398955Z *** installing help indices 2021-05-15T13:58:58.8762851Z ** building package indices 2021-05-15T13:58:59.0639172Z ** installing vignettes 2021-05-15T13:58:59.0729796Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:58:59.2427781Z ** testing if installed package can be loaded from final location 2021-05-15T13:58:59.4062714Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:58:59.4063551Z * DONE (rex) 2021-05-15T13:58:59.7175960Z * installing *source* package ‘covr’ ... 2021-05-15T13:58:59.7226363Z ** package ‘covr’ successfully unpacked and MD5 sums checked 2021-05-15T13:58:59.7227539Z ** using staged installation 2021-05-15T13:58:59.7409698Z ** libs 2021-05-15T13:58:59.7453362Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o 2021-05-15T13:58:59.7984040Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o covr.so reassign.o -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:58:59.8130972Z installing to /home/runner/work/_temp/Library/00LOCK-covr/00new/covr/libs 2021-05-15T13:58:59.8143244Z ** R 2021-05-15T13:58:59.8262203Z ** inst 2021-05-15T13:58:59.8281645Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:59:01.1029511Z ** help 2021-05-15T13:59:01.1635510Z *** installing help indices 2021-05-15T13:59:01.2112344Z *** copying figures 2021-05-15T13:59:01.2113862Z ** building package indices 2021-05-15T13:59:01.4337659Z ** installing vignettes 2021-05-15T13:59:01.4374434Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:59:01.6329592Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:59:01.6503281Z ** testing if installed package can be loaded from final location 2021-05-15T13:59:01.8647120Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:59:01.8666049Z * DONE (covr) 2021-05-15T13:59:01.8762903Z 2021-05-15T13:59:01.8763656Z The downloaded source packages are in 2021-05-15T13:59:01.8764952Z ‘/tmp/RtmpjWHLac/downloaded_packages’ 2021-05-15T13:59:01.8891924Z ##[group]Run Rscript -e "tic::before_install()" 2021-05-15T13:59:01.8892521Z Rscript -e "tic::before_install()" 2021-05-15T13:59:01.8938114Z shell: /usr/bin/bash -e {0} 2021-05-15T13:59:01.8938472Z env: 2021-05-15T13:59:01.8938898Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T13:59:01.8939328Z TIC_DEPLOY_KEY: 2021-05-15T13:59:01.8940089Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T13:59:01.8941704Z GITHUB_PAT: *** 2021-05-15T13:59:01.8942066Z COVERALLS_TOKEN: 2021-05-15T13:59:01.8942524Z continue-on-error: true 2021-05-15T13:59:01.8942951Z VDIFFR_RUN_TESTS: 2021-05-15T13:59:01.8943405Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T13:59:01.8943826Z TZ: UTC 2021-05-15T13:59:01.8944192Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T13:59:01.8944563Z NOT_CRAN: true 2021-05-15T13:59:01.8944916Z ##[endgroup] 2021-05-15T13:59:02.1580819Z ✔ Loading tic stage configuration from tic.R 2021-05-15T13:59:02.2837321Z Running before_install: step_install_remote_binaries() 2021-05-15T13:59:02.8068815Z ##[group]Run remotes::install_deps(dependencies = TRUE) 2021-05-15T13:59:02.8069632Z remotes::install_deps(dependencies = TRUE) 2021-05-15T13:59:02.8070278Z remotes::install_cran("rcmdcheck") 2021-05-15T13:59:02.8070869Z remotes::install_cran("markdown") 2021-05-15T13:59:02.8078543Z shell: /usr/local/bin/Rscript {0} 2021-05-15T13:59:02.8078952Z env: 2021-05-15T13:59:02.8079359Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T13:59:02.8079811Z TIC_DEPLOY_KEY: 2021-05-15T13:59:02.8080579Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T13:59:02.8083160Z GITHUB_PAT: *** 2021-05-15T13:59:02.8083655Z COVERALLS_TOKEN: 2021-05-15T13:59:02.8084110Z continue-on-error: true 2021-05-15T13:59:02.8084558Z VDIFFR_RUN_TESTS: 2021-05-15T13:59:02.8085017Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T13:59:02.8085420Z TZ: UTC 2021-05-15T13:59:02.8085784Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T13:59:02.8086199Z NOT_CRAN: true 2021-05-15T13:59:02.8086542Z ##[endgroup] 2021-05-15T13:59:19.8414239Z png (NA -> 0.1-7 ) [CRAN] 2021-05-15T13:59:19.8415812Z lubridate (NA -> 1.7.10) [CRAN] 2021-05-15T13:59:19.8438980Z Installing 2 packages: png, lubridate 2021-05-15T13:59:19.8451849Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-15T13:59:19.8453008Z (as ‘lib’ is unspecified) 2021-05-15T13:59:34.8017043Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/png_0.1-7.tar.gz' 2021-05-15T13:59:35.3073756Z Content type 'application/x-tar' length 24973 bytes (24 KB) 2021-05-15T13:59:35.3075294Z ================================================== 2021-05-15T13:59:35.3076018Z downloaded 24 KB 2021-05-15T13:59:35.3076536Z 2021-05-15T13:59:35.3116836Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lubridate_1.7.10.tar.gz' 2021-05-15T13:59:35.8362032Z Content type 'binary/octet-stream' length 474741 bytes (463 KB) 2021-05-15T13:59:35.8954516Z ================================================== 2021-05-15T13:59:35.8955063Z downloaded 463 KB 2021-05-15T13:59:35.8955338Z 2021-05-15T13:59:36.0971234Z * installing *source* package ‘png’ ... 2021-05-15T13:59:36.0979362Z ** package ‘png’ successfully unpacked and MD5 sums checked 2021-05-15T13:59:36.0980383Z ** using staged installation 2021-05-15T13:59:36.1080971Z ** libs 2021-05-15T13:59:36.1132099Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include `libpng-config --cflags` -fpic -g -O2 -c read.c -o read.o 2021-05-15T13:59:36.3215375Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include `libpng-config --cflags` -fpic -g -O2 -c write.c -o write.o 2021-05-15T13:59:36.5037053Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o png.so read.o write.o -lpng16 -lm -lz -lm -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:59:36.5330633Z installing to /home/runner/work/_temp/Library/00LOCK-png/00new/png/libs 2021-05-15T13:59:36.5346275Z ** R 2021-05-15T13:59:36.5371077Z ** inst 2021-05-15T13:59:36.5378938Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:59:36.7593314Z ** help 2021-05-15T13:59:36.7811425Z *** installing help indices 2021-05-15T13:59:36.7961111Z ** building package indices 2021-05-15T13:59:36.9822114Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:59:37.1572876Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:59:37.1750812Z ** testing if installed package can be loaded from final location 2021-05-15T13:59:37.3446005Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:59:37.3451834Z * DONE (png) 2021-05-15T13:59:37.7025263Z * installing *source* package ‘lubridate’ ... 2021-05-15T13:59:37.7098149Z ** package ‘lubridate’ successfully unpacked and MD5 sums checked 2021-05-15T13:59:37.7099377Z ** using staged installation 2021-05-15T13:59:37.7273990Z ** libs 2021-05-15T13:59:37.7332588Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c cctz/src/time_zone_fixed.cc -o cctz/src/time_zone_fixed.o 2021-05-15T13:59:38.1323857Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c cctz/src/time_zone_if.cc -o cctz/src/time_zone_if.o 2021-05-15T13:59:38.6483097Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c cctz/src/time_zone_impl.cc -o cctz/src/time_zone_impl.o 2021-05-15T13:59:39.4785381Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c cctz/src/time_zone_info.cc -o cctz/src/time_zone_info.o 2021-05-15T13:59:41.6964616Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c cctz/src/time_zone_libc.cc -o cctz/src/time_zone_libc.o 2021-05-15T13:59:42.3966974Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c cctz/src/time_zone_lookup.cc -o cctz/src/time_zone_lookup.o 2021-05-15T13:59:42.8930801Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c cctz/src/time_zone_posix.cc -o cctz/src/time_zone_posix.o 2021-05-15T13:59:43.1280343Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c cctz/src/zone_info_source.cc -o cctz/src/zone_info_source.o 2021-05-15T13:59:43.3982325Z ar rcs libcctz.a ./cctz/src/time_zone_fixed.o ./cctz/src/time_zone_if.o ./cctz/src/time_zone_impl.o ./cctz/src/time_zone_info.o ./cctz/src/time_zone_libc.o ./cctz/src/time_zone_lookup.o ./cctz/src/time_zone_posix.o ./cctz/src/zone_info_source.o 2021-05-15T13:59:43.4069400Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-15T13:59:47.6837856Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c update.cpp -o update.o 2021-05-15T13:59:52.5787554Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-15T13:59:52.6552856Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c datetime.c -o datetime.o 2021-05-15T13:59:52.7507663Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c period.c -o period.o 2021-05-15T13:59:52.8305576Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c tparse.c -o tparse.o 2021-05-15T13:59:53.0601750Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o lubridate.so RcppExports.o update.o utils.o datetime.o period.o tparse.o -L. -lcctz -L/opt/R/devel/lib/R/lib -lR 2021-05-15T13:59:53.1699386Z installing to /home/runner/work/_temp/Library/00LOCK-lubridate/00new/lubridate/libs 2021-05-15T13:59:53.1735754Z ** R 2021-05-15T13:59:53.2021022Z ** data 2021-05-15T13:59:53.2026719Z *** moving datasets to lazyload DB 2021-05-15T13:59:53.5498295Z ** inst 2021-05-15T13:59:53.5513931Z ** byte-compile and prepare package for lazy loading 2021-05-15T13:59:57.4408361Z ** help 2021-05-15T13:59:57.6215624Z *** installing help indices 2021-05-15T13:59:57.7533865Z *** copying figures 2021-05-15T13:59:57.7536853Z ** building package indices 2021-05-15T13:59:58.0350938Z ** installing vignettes 2021-05-15T13:59:58.0478241Z ** testing if installed package can be loaded from temporary location 2021-05-15T13:59:58.4322584Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-15T13:59:58.4519817Z ** testing if installed package can be loaded from final location 2021-05-15T13:59:58.8934313Z ** testing if installed package keeps a record of temporary installation path 2021-05-15T13:59:58.8971475Z * DONE (lubridate) 2021-05-15T13:59:58.9079146Z 2021-05-15T13:59:58.9080211Z The downloaded source packages are in 2021-05-15T13:59:58.9081547Z ‘/tmp/RtmpWVyBcR/downloaded_packages’ 2021-05-15T14:00:13.0178467Z Skipping install of 'rcmdcheck' from a cran remote, the SHA1 (1.3.3) has not changed since last install. 2021-05-15T14:00:13.0179528Z Use `force = TRUE` to force installation 2021-05-15T14:00:13.0180729Z Skipping install of 'markdown' from a cran remote, the SHA1 (1.1) has not changed since last install. 2021-05-15T14:00:13.0181608Z Use `force = TRUE` to force installation 2021-05-15T14:00:13.0211777Z ##[group]Run options(width = 100) 2021-05-15T14:00:13.0212268Z options(width = 100) 2021-05-15T14:00:13.0213122Z pkgs <- installed.packages()[, "Package"] 2021-05-15T14:00:13.0213771Z sessioninfo::session_info(pkgs, include_base = TRUE) 2021-05-15T14:00:13.0221599Z shell: /usr/local/bin/Rscript {0} 2021-05-15T14:00:13.0221989Z env: 2021-05-15T14:00:13.0222397Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T14:00:13.0222851Z TIC_DEPLOY_KEY: 2021-05-15T14:00:13.0223611Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T14:00:13.0225327Z GITHUB_PAT: *** 2021-05-15T14:00:13.0225709Z COVERALLS_TOKEN: 2021-05-15T14:00:13.0226151Z continue-on-error: true 2021-05-15T14:00:13.0226593Z VDIFFR_RUN_TESTS: 2021-05-15T14:00:13.0227030Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T14:00:13.0227448Z TZ: UTC 2021-05-15T14:00:13.0227798Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T14:00:13.0228234Z NOT_CRAN: true 2021-05-15T14:00:13.0228575Z ##[endgroup] 2021-05-15T14:00:13.4572749Z ─ Session info ─────────────────────────────────────────────────────────────────────────────────── 2021-05-15T14:00:13.4582389Z setting value 2021-05-15T14:00:13.4583551Z version R Under development (unstable) (2021-05-13 r80294) 2021-05-15T14:00:13.4584287Z os Ubuntu 20.04.2 LTS 2021-05-15T14:00:13.4585469Z system x86_64, linux-gnu 2021-05-15T14:00:13.4586075Z ui X11 2021-05-15T14:00:13.4586691Z language (EN) 2021-05-15T14:00:13.4587479Z collate C.UTF-8 2021-05-15T14:00:13.4588250Z ctype C.UTF-8 2021-05-15T14:00:13.4588846Z tz UTC 2021-05-15T14:00:13.4589537Z date 2021-05-15 2021-05-15T14:00:13.4589794Z 2021-05-15T14:00:13.4590722Z ─ Packages ─────────────────────────────────────────────────────────────────────────────────────── 2021-05-15T14:00:13.4591484Z package * version date lib source 2021-05-15T14:00:13.4592472Z aghast 0.2.1 2021-05-15 [1] Github (muschellij2/aghast@0c3b853) 2021-05-15T14:00:13.4593416Z askpass 1.1 2019-01-13 [1] RSPM (R 4.2.0) 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RSPM (R 4.2.0) 2021-05-15T14:00:13.4653962Z prettyunits 1.1.1 2020-01-24 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4654851Z processx 3.5.2 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4655681Z ps 1.6.0 2021-02-28 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4656510Z purrr 0.3.4 2020-04-17 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4657552Z R6 2.5.0 2020-10-28 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4658393Z rappdirs 0.3.3 2021-01-31 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4659278Z rcmdcheck 1.3.3 2019-05-07 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4660124Z Rcpp 1.0.6 2021-01-15 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4660974Z rematch2 2.1.2 2020-05-01 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4661839Z remotes 2.3.0 2021-04-01 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4662669Z rex 1.2.0 2020-04-21 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4663504Z rlang 0.4.11 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4664357Z roxygen2 7.1.1 2020-06-27 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4665199Z rpart 4.1-15 2019-04-12 [2] CRAN (R 4.2.0) 2021-05-15T14:00:13.4666053Z rprojroot 2.0.2 2020-11-15 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4666940Z rstudioapi 0.13 2020-11-12 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4667814Z rversions 2.0.2 2020-05-25 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4668700Z sessioninfo 1.1.1 2018-11-05 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4669565Z spatial 7.3-14 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-15T14:00:13.4670420Z splines 4.2.0 2021-05-14 [2] local 2021-05-15T14:00:13.4671364Z stats * 4.2.0 2021-05-14 [2] local 2021-05-15T14:00:13.4672206Z stats4 4.2.0 2021-05-14 [2] local 2021-05-15T14:00:13.4673057Z stringi 1.6.1 2021-05-10 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4673908Z stringr 1.4.0 2019-02-10 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4674759Z survival 3.2-11 2021-04-26 [2] CRAN (R 4.2.0) 2021-05-15T14:00:13.4675696Z sys 3.4 2020-07-23 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4676591Z sysreqs 1.0.0.9000 2021-05-15 [1] Github (r-hub/sysreqs@f068afa) 2021-05-15T14:00:13.4677464Z tcltk 4.2.0 2021-05-14 [2] local 2021-05-15T14:00:13.4678314Z testthat 3.0.2 2021-02-14 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4679157Z tibble 3.1.1 2021-04-18 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4680054Z tic 0.10.0 2021-05-15 [1] Github (ropensci/tic@3b4dfb8) 2021-05-15T14:00:13.4680937Z tidyr 1.1.3 2021-03-03 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4681779Z tidyselect 1.1.1 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4682644Z tools 4.2.0 2021-05-14 [2] local 2021-05-15T14:00:13.4683495Z usethis 2.0.1 2021-02-10 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4684366Z utf8 1.2.1 2021-03-12 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4685196Z utils * 4.2.0 2021-05-14 [2] local 2021-05-15T14:00:13.4686029Z vctrs 0.3.8 2021-04-29 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4686883Z waldo 0.2.5 2021-03-08 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4687732Z whisker 0.4 2019-08-28 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4688579Z withr 2.4.2 2021-04-18 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4689385Z xfun 0.23 2021-05-15 [1] CRAN (R 4.2.0) 2021-05-15T14:00:13.4690210Z xml2 1.3.2 2020-04-23 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4691046Z xopen 1.0.0 2018-09-17 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4691883Z yaml 2.2.1 2020-02-01 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4692713Z zip 2.1.1 2020-08-27 [1] RSPM (R 4.2.0) 2021-05-15T14:00:13.4693094Z 2021-05-15T14:00:13.4693615Z [1] /home/runner/work/_temp/Library 2021-05-15T14:00:13.4694221Z [2] /opt/R/devel/lib/R/library 2021-05-15T14:00:13.4724763Z ##[group]Run Rscript -e 'tic::script()' 2021-05-15T14:00:13.4725293Z Rscript -e 'tic::script()' 2021-05-15T14:00:13.4725680Z ls -l check 2021-05-15T14:00:13.4768567Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-05-15T14:00:13.4769044Z env: 2021-05-15T14:00:13.4769460Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T14:00:13.4769884Z TIC_DEPLOY_KEY: 2021-05-15T14:00:13.4770647Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T14:00:13.4772414Z GITHUB_PAT: *** 2021-05-15T14:00:13.4772795Z COVERALLS_TOKEN: 2021-05-15T14:00:13.4773232Z continue-on-error: true 2021-05-15T14:00:13.4773689Z VDIFFR_RUN_TESTS: 2021-05-15T14:00:13.4774127Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T14:00:13.4774548Z TZ: UTC 2021-05-15T14:00:13.4774915Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T14:00:13.4775287Z NOT_CRAN: true 2021-05-15T14:00:13.4775637Z ##[endgroup] 2021-05-15T14:00:14.3338707Z ✔ Loading tic stage configuration from tic.R 2021-05-15T14:00:14.3339971Z Running script: step_rcmdcheck(warnings_are_errors = NULL, notes_are_errors = NULL, 2021-05-15T14:00:14.3341114Z args = args, build_args = NULL, error_on = error_on, repos = repo_default(), 2021-05-15T14:00:14.3347089Z timeout = Inf, check_dir = "check") 2021-05-15T14:00:14.3354973Z ── R CMD build ───────────────────────────────────────────────────────────────── 2021-05-15T14:00:14.3355734Z * checking for file ‘.../DESCRIPTION’ ... OK 2021-05-15T14:00:14.3356361Z * preparing ‘dcmtk’: 2021-05-15T14:00:14.3357219Z * checking DESCRIPTION meta-information ... OK 2021-05-15T14:00:14.3358099Z * running ‘cleanup’ 2021-05-15T14:00:14.3358967Z * checking for LF line-endings in source and make files and shell scripts 2021-05-15T14:00:14.3359709Z * checking for empty or unneeded directories 2021-05-15T14:00:14.3360413Z * building ‘dcmtk_0.6.8.1.tar.gz’ 2021-05-15T14:00:14.3360704Z 2021-05-15T14:00:14.5146669Z ── R CMD check ───────────────────────────────────────────────────────────────── 2021-05-15T14:00:14.7215922Z * using log directory ‘/home/runner/work/dcmtk/dcmtk/check/dcmtk.Rcheck’ 2021-05-15T14:00:14.7217663Z * using R Under development (unstable) (2021-05-13 r80294) 2021-05-15T14:00:14.7232637Z * using platform: x86_64-pc-linux-gnu (64-bit) 2021-05-15T14:00:14.7233705Z * using session charset: UTF-8 2021-05-15T14:00:14.8121059Z * using option ‘--as-cran’ 2021-05-15T14:00:14.8141817Z * checking for file ‘dcmtk/DESCRIPTION’ ... OK 2021-05-15T14:00:14.8151036Z * checking extension type ... Package 2021-05-15T14:00:14.8152273Z * this is package ‘dcmtk’ version ‘0.6.8.1’ 2021-05-15T14:00:14.8153202Z * package encoding: UTF-8 2021-05-15T14:00:14.8188527Z * checking package namespace information ... OK 2021-05-15T14:00:29.3178647Z * checking package dependencies ... OK 2021-05-15T14:00:29.3189609Z * checking if this is a source package ... OK 2021-05-15T14:00:29.3190610Z * checking if there is a namespace ... OK 2021-05-15T14:00:29.5627217Z * checking for executable files ... OK 2021-05-15T14:00:29.5635068Z * checking for hidden files and directories ... OK 2021-05-15T14:00:29.5641531Z * checking for portable file names ... OK 2021-05-15T14:00:29.5648429Z * checking for sufficient/correct file permissions ... OK 2021-05-15T14:00:29.5672047Z * checking serialization versions ... OK 2021-05-15T14:00:33.1599975Z * checking whether package ‘dcmtk’ can be installed ... OK 2021-05-15T14:00:33.1658837Z * checking installed package size ... OK 2021-05-15T14:00:33.2236265Z * checking package directory ... OK 2021-05-15T14:00:33.2237161Z * checking for future file timestamps ... OK 2021-05-15T14:00:33.3740404Z * checking DESCRIPTION meta-information ... OK 2021-05-15T14:00:33.4301471Z * checking top-level files ... OK 2021-05-15T14:00:33.4302282Z * checking for left-over files ... OK 2021-05-15T14:00:33.4302842Z * checking index information ... OK 2021-05-15T14:00:33.4793725Z * checking package subdirectories ... OK 2021-05-15T14:00:33.5253671Z * checking R files for non-ASCII characters ... OK 2021-05-15T14:00:33.5763052Z * checking R files for syntax errors ... OK 2021-05-15T14:00:34.3970686Z * checking whether the package can be loaded ... OK 2021-05-15T14:00:35.0059601Z * checking whether the package can be loaded with stated dependencies ... OK 2021-05-15T14:00:35.6100120Z * checking whether the package can be unloaded cleanly ... OK 2021-05-15T14:00:36.2119947Z * checking whether the namespace can be loaded with stated dependencies ... OK 2021-05-15T14:00:37.0235707Z * checking whether the namespace can be unloaded cleanly ... OK 2021-05-15T14:00:37.8614542Z * checking loading without being on the library search path ... OK 2021-05-15T14:00:38.5322625Z * checking dependencies in R code ... OK 2021-05-15T14:00:40.1471432Z * checking S3 generic/method consistency ... OK 2021-05-15T14:00:40.7711385Z * checking replacement functions ... OK 2021-05-15T14:00:41.4397966Z * checking foreign function calls ... OK 2021-05-15T14:00:46.6578338Z * checking R code for possible problems ... OK 2021-05-15T14:00:46.8811173Z * checking Rd files ... OK 2021-05-15T14:00:46.9272069Z * checking Rd metadata ... OK 2021-05-15T14:00:47.0133481Z * checking Rd line widths ... OK 2021-05-15T14:00:47.1176297Z * checking Rd cross-references ... OK 2021-05-15T14:00:47.7103790Z * checking for missing documentation entries ... OK 2021-05-15T14:00:49.6544802Z * checking for code/documentation mismatches ... OK 2021-05-15T14:00:51.4378181Z * checking Rd \usage sections ... OK 2021-05-15T14:00:51.5385475Z * checking Rd contents ... OK 2021-05-15T14:00:51.6479154Z * checking for unstated dependencies in examples ... OK 2021-05-15T14:00:51.6637678Z * checking contents of ‘data’ directory ... OK 2021-05-15T14:00:51.8314920Z * checking data for non-ASCII characters ... OK 2021-05-15T14:00:51.8327218Z * checking LazyData ... OK 2021-05-15T14:00:51.9895025Z * checking data for ASCII and uncompressed saves ... OK 2021-05-15T14:00:51.9896064Z * checking line endings in shell scripts ... OK 2021-05-15T14:00:54.5252960Z * checking examples ... OK 2021-05-15T14:00:54.5975407Z * checking for unstated dependencies in ‘tests’ ... OK 2021-05-15T14:00:54.7572333Z * checking tests ... 2021-05-15T14:01:04.2864141Z Running ‘testthat.R’ 2021-05-15T14:01:04.2913807Z OK 2021-05-15T14:01:06.2938434Z * checking PDF version of manual ... OK 2021-05-15T14:01:06.2940241Z * checking for non-standard things in the check directory ... OK 2021-05-15T14:01:06.2959153Z * checking for detritus in the temp directory ... OK 2021-05-15T14:01:06.2959961Z * DONE 2021-05-15T14:01:06.2960372Z 2021-05-15T14:01:06.2960879Z Status: OK 2021-05-15T14:01:06.2961286Z 2021-05-15T14:01:06.3870392Z ── R CMD check results ────────────────────────────────────── dcmtk 0.6.8.1 ──── 2021-05-15T14:01:06.3887051Z Duration: 52s 2021-05-15T14:01:06.3887520Z 2021-05-15T14:01:06.3900020Z 0 errors ✔ | 0 warnings ✔ | 0 notes ✔ 2021-05-15T14:01:06.3990993Z total 1300 2021-05-15T14:01:06.3992566Z drwxr-xr-x 6 runner docker 4096 May 15 14:01 dcmtk.Rcheck 2021-05-15T14:01:06.3993871Z -rw-r--r-- 1 runner docker 627992 May 15 14:00 dcmtk_0.6.8.1.tar.gz 2021-05-15T14:01:06.3995043Z -rw-r--r-- 1 runner docker 695255 May 15 14:00 dcmtk_0.6.8.1_R_x86_64-pc-linux-gnu.tar.gz 2021-05-15T14:01:06.4025396Z ##[group]Run find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-05-15T14:01:06.4026117Z find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-05-15T14:01:06.4068974Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-05-15T14:01:06.4069452Z env: 2021-05-15T14:01:06.4069855Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T14:01:06.4070297Z TIC_DEPLOY_KEY: 2021-05-15T14:01:06.4071070Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T14:01:06.4072851Z GITHUB_PAT: *** 2021-05-15T14:01:06.4073228Z COVERALLS_TOKEN: 2021-05-15T14:01:06.4073662Z continue-on-error: true 2021-05-15T14:01:06.4074098Z VDIFFR_RUN_TESTS: 2021-05-15T14:01:06.4074537Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T14:01:06.4074956Z TZ: UTC 2021-05-15T14:01:06.4075305Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T14:01:06.4075685Z NOT_CRAN: true 2021-05-15T14:01:06.4076029Z ##[endgroup] 2021-05-15T14:01:07.3433537Z 2021-05-15T14:01:07.3443931Z R Under development (unstable) (2021-05-13 r80294) -- "Unsuffered Consequences" 2021-05-15T14:01:07.3445128Z Copyright (C) 2021 The R Foundation for Statistical Computing 2021-05-15T14:01:07.3446301Z Platform: x86_64-pc-linux-gnu (64-bit) 2021-05-15T14:01:07.3446833Z 2021-05-15T14:01:07.3447602Z R is free software and comes with ABSOLUTELY NO WARRANTY. 2021-05-15T14:01:07.3448813Z You are welcome to redistribute it under certain conditions. 2021-05-15T14:01:07.3450251Z Type 'license()' or 'licence()' for distribution details. 2021-05-15T14:01:07.3450708Z 2021-05-15T14:01:07.3451356Z R is a collaborative project with many contributors. 2021-05-15T14:01:07.3452321Z Type 'contributors()' for more information and 2021-05-15T14:01:07.3453691Z 'citation()' on how to cite R or R packages in publications. 2021-05-15T14:01:07.3454147Z 2021-05-15T14:01:07.3454920Z Type 'demo()' for some demos, 'help()' for on-line help, or 2021-05-15T14:01:07.3455892Z 'help.start()' for an HTML browser interface to help. 2021-05-15T14:01:07.3456821Z Type 'q()' to quit R. 2021-05-15T14:01:07.3457115Z 2021-05-15T14:01:07.3457539Z > library(testthat) 2021-05-15T14:01:07.3457997Z > library(dcmtk) 2021-05-15T14:01:07.3458380Z > 2021-05-15T14:01:07.3458882Z > have_dcmtk = have_dcmtk_cmd("dcmdump") 2021-05-15T14:01:07.3459408Z > if (!have_dcmtk) { 2021-05-15T14:01:07.3459895Z + install_dir = tempdir() 2021-05-15T14:01:07.3460496Z + options(dcmtk.path = install_dir) 2021-05-15T14:01:07.3461231Z + } 2021-05-15T14:01:07.3461818Z > in_ci <- function() { 2021-05-15T14:01:07.3462328Z + nzchar(Sys.getenv("CI")) 2021-05-15T14:01:07.3462746Z + } 2021-05-15T14:01:07.3463149Z > if (!have_dcmtk) { 2021-05-15T14:01:07.3463561Z + res = try({ 2021-05-15T14:01:07.3464129Z + install_dcmtk(install_dir = install_dir) 2021-05-15T14:01:07.3464595Z + }) 2021-05-15T14:01:07.3465259Z + if (inherits(res, "try-error")) { 2021-05-15T14:01:07.3465758Z + res = FALSE 2021-05-15T14:01:07.3466130Z + } 2021-05-15T14:01:07.3466496Z + if (!res) { 2021-05-15T14:01:07.3467100Z + source_install_dcmtk(install_dir = install_dir) 2021-05-15T14:01:07.3467587Z + } 2021-05-15T14:01:07.3467918Z + } 2021-05-15T14:01:07.3468233Z > 2021-05-15T14:01:07.3468558Z > 2021-05-15T14:01:07.3468972Z > test_check("dcmtk") 2021-05-15T14:01:07.3469496Z [ FAIL 0 | WARN 0 | SKIP 0 | PASS 30 ] 2021-05-15T14:01:07.3469909Z > 2021-05-15T14:01:07.3470287Z > proc.time() 2021-05-15T14:01:07.3470791Z user system elapsed 2021-05-15T14:01:07.3471246Z 1.497 0.131 9.496 2021-05-15T14:01:07.3502508Z ##[group]Run Rscript -e "tic::before_deploy()" 2021-05-15T14:01:07.3503051Z Rscript -e "tic::before_deploy()" 2021-05-15T14:01:07.3545266Z shell: /usr/bin/bash -e {0} 2021-05-15T14:01:07.3545636Z env: 2021-05-15T14:01:07.3546051Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T14:01:07.3546480Z TIC_DEPLOY_KEY: 2021-05-15T14:01:07.3547239Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T14:01:07.3548481Z GITHUB_PAT: *** 2021-05-15T14:01:07.3548852Z COVERALLS_TOKEN: 2021-05-15T14:01:07.3549289Z continue-on-error: true 2021-05-15T14:01:07.3549731Z VDIFFR_RUN_TESTS: 2021-05-15T14:01:07.3550329Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T14:01:07.3550745Z TZ: UTC 2021-05-15T14:01:07.3551105Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T14:01:07.3551475Z NOT_CRAN: true 2021-05-15T14:01:07.3551825Z ##[endgroup] 2021-05-15T14:01:07.6138479Z ✔ Loading tic stage configuration from tic.R 2021-05-15T14:01:07.7357008Z ##[group]Run actions/upload-release-asset@v1.0.1 2021-05-15T14:01:07.7357529Z with: 2021-05-15T14:01:07.7358297Z upload_url: https://uploads.github.com/repos/neuroconductor/dcmtk/releases/42997055/assets{?name,label} 2021-05-15T14:01:07.7359246Z asset_path: check/dcmtk_0.6.8.1_R_x86_64-pc-linux-gnu.tar.gz 2021-05-15T14:01:07.7359869Z asset_name: dcmtk_0.6.8.1_R_x86_64-pc-linux-gnu_R4.1.tar.gz 2021-05-15T14:01:07.7360479Z asset_content_type: application/octet-stream 2021-05-15T14:01:07.7360933Z env: 2021-05-15T14:01:07.7361343Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T14:01:07.7361789Z TIC_DEPLOY_KEY: 2021-05-15T14:01:07.7362529Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T14:01:07.7364019Z GITHUB_PAT: *** 2021-05-15T14:01:07.7364380Z COVERALLS_TOKEN: 2021-05-15T14:01:07.7364832Z continue-on-error: true 2021-05-15T14:01:07.7365262Z VDIFFR_RUN_TESTS: 2021-05-15T14:01:07.7365755Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T14:01:07.7366172Z TZ: UTC 2021-05-15T14:01:07.7366539Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T14:01:07.7366913Z NOT_CRAN: true 2021-05-15T14:01:07.7367836Z GITHUB_TOKEN: *** 2021-05-15T14:01:07.7368191Z ##[endgroup] 2021-05-15T14:01:08.2935584Z ##[group]Run Rscript -e "tic::deploy()" 2021-05-15T14:01:08.2936103Z Rscript -e "tic::deploy()" 2021-05-15T14:01:08.2978536Z shell: /usr/bin/bash -e {0} 2021-05-15T14:01:08.2978900Z env: 2021-05-15T14:01:08.2979328Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T14:01:08.2979756Z TIC_DEPLOY_KEY: 2021-05-15T14:01:08.2980522Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T14:01:08.2982056Z GITHUB_PAT: *** 2021-05-15T14:01:08.2982414Z COVERALLS_TOKEN: 2021-05-15T14:01:08.2982868Z continue-on-error: true 2021-05-15T14:01:08.2983295Z VDIFFR_RUN_TESTS: 2021-05-15T14:01:08.2983747Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T14:01:08.2984279Z TZ: UTC 2021-05-15T14:01:08.2984644Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T14:01:08.2985014Z NOT_CRAN: true 2021-05-15T14:01:08.2985366Z ##[endgroup] 2021-05-15T14:01:08.5579621Z ✔ Loading tic stage configuration from tic.R 2021-05-15T14:01:08.6799561Z ##[group]Run Rscript -e "tic::after_deploy()" 2021-05-15T14:01:08.6800123Z Rscript -e "tic::after_deploy()" 2021-05-15T14:01:08.6851668Z shell: /usr/bin/bash -e {0} 2021-05-15T14:01:08.6852047Z env: 2021-05-15T14:01:08.6852469Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-15T14:01:08.6852894Z TIC_DEPLOY_KEY: 2021-05-15T14:01:08.6853649Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-15T14:01:08.6855308Z GITHUB_PAT: *** 2021-05-15T14:01:08.6855688Z COVERALLS_TOKEN: 2021-05-15T14:01:08.6856124Z continue-on-error: true 2021-05-15T14:01:08.6857549Z VDIFFR_RUN_TESTS: 2021-05-15T14:01:08.6857999Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-15T14:01:08.6858431Z TZ: UTC 2021-05-15T14:01:08.6858794Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-15T14:01:08.6859166Z NOT_CRAN: true 2021-05-15T14:01:08.6859520Z ##[endgroup] 2021-05-15T14:01:08.9475464Z ✔ Loading tic stage configuration from tic.R 2021-05-15T14:01:09.2242910Z Post job cleanup. 2021-05-15T14:01:09.2657142Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-05-15T14:01:09.2758080Z Post job cleanup. 2021-05-15T14:01:09.3693306Z [command]/usr/bin/git version 2021-05-15T14:01:09.3749898Z git version 2.31.1 2021-05-15T14:01:09.3790572Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-05-15T14:01:09.3836681Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-05-15T14:01:09.4064970Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-05-15T14:01:09.4103100Z http.https://github.com/.extraheader 2021-05-15T14:01:09.4113399Z [command]/usr/bin/git config --local --unset-all http.https://github.com/.extraheader 2021-05-15T14:01:09.4152801Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-05-15T14:01:09.4441846Z Cleaning up orphan processes