2021-10-01T23:00:53.6573112Z Found online and idle hosted runner in the current repository's enterprise account that matches the required labels: 'ubuntu-20.04' 2021-10-01T23:00:53.7342612Z Waiting for a Hosted runner in the 'enterprise' to pick this job... 2021-10-01T23:00:54.2475901Z Job is waiting for a hosted runner to come online. 2021-10-01T23:00:58.3498431Z Job is about to start running on the hosted runner: GitHub Actions 9 (hosted) 2021-10-01T23:01:01.6859951Z Current runner version: '2.283.1' 2021-10-01T23:01:01.6889350Z ##[group]Operating System 2021-10-01T23:01:01.6890469Z Ubuntu 2021-10-01T23:01:01.6891087Z 20.04.3 2021-10-01T23:01:01.6891564Z LTS 2021-10-01T23:01:01.6892141Z ##[endgroup] 2021-10-01T23:01:01.6892775Z ##[group]Virtual Environment 2021-10-01T23:01:01.6893568Z Environment: ubuntu-20.04 2021-10-01T23:01:01.6894238Z Version: 20210929.1 2021-10-01T23:01:01.6895373Z Included Software: https://github.com/actions/virtual-environments/blob/ubuntu20/20210929.1/images/linux/Ubuntu2004-README.md 2021-10-01T23:01:01.6896989Z Image Release: https://github.com/actions/virtual-environments/releases/tag/ubuntu20%2F20210929.1 2021-10-01T23:01:01.6898226Z ##[endgroup] 2021-10-01T23:01:01.6899005Z ##[group]Virtual Environment Provisioner 2021-10-01T23:01:01.6899736Z 1.0.0.0-master-20210914-1 2021-10-01T23:01:01.6900393Z ##[endgroup] 2021-10-01T23:01:01.6902639Z ##[group]GITHUB_TOKEN Permissions 2021-10-01T23:01:01.6904273Z Actions: write 2021-10-01T23:01:01.6904918Z Checks: write 2021-10-01T23:01:01.6905563Z Contents: write 2021-10-01T23:01:01.6906168Z Deployments: write 2021-10-01T23:01:01.6906867Z Discussions: write 2021-10-01T23:01:01.6907496Z Issues: write 2021-10-01T23:01:01.6908050Z Metadata: read 2021-10-01T23:01:01.6908686Z Packages: write 2021-10-01T23:01:01.6909298Z PullRequests: write 2021-10-01T23:01:01.6910068Z RepositoryProjects: write 2021-10-01T23:01:01.6910840Z SecurityEvents: write 2021-10-01T23:01:01.6911471Z Statuses: write 2021-10-01T23:01:01.6912200Z ##[endgroup] 2021-10-01T23:01:01.6915643Z Prepare workflow directory 2021-10-01T23:01:01.8031325Z Prepare all required actions 2021-10-01T23:01:01.8042395Z Getting action download info 2021-10-01T23:01:02.0935792Z Download action repository 'actions/checkout@v2' (SHA:5a4ac9002d0be2fb38bd78e4b4dbde5606d7042f) 2021-10-01T23:01:04.1561124Z Download action repository 'r-lib/actions@master' (SHA:a6c42d57e6b906e39156f2848eff828a2ef2ce7f) 2021-10-01T23:01:04.7779480Z Download action repository 'adigherman/actions@master' (SHA:823b84b9048a5c2c02e5cb4270eb98609230dd11) 2021-10-01T23:01:06.9748612Z Download action repository 'msys2/setup-msys2@v2' (SHA:549e904fc53cb840ec72fec29f3e8fc00f579b5b) 2021-10-01T23:01:07.1387225Z Download action repository 'actions/cache@v1' (SHA:70655ec8323daeeaa7ef06d7c56e1b9191396cbe) 2021-10-01T23:01:07.2805887Z Download action repository 'actions/upload-artifact@master' (SHA:11e311c8b504ea40cbed20583a64d75b4735cff3) 2021-10-01T23:01:07.4319676Z Download action repository 'actions/upload-release-asset@v1.0.1' (SHA:64e5e85fc528f162d7ba7ce2d15a3bb67efb3d80) 2021-10-01T23:01:08.3576479Z ##[group]Run actions/checkout@v2 2021-10-01T23:01:08.3577177Z with: 2021-10-01T23:01:08.3636944Z repository: neuroconductor/ciftiTools 2021-10-01T23:01:08.3638291Z token: *** 2021-10-01T23:01:08.3638721Z ssh-strict: true 2021-10-01T23:01:08.3639289Z persist-credentials: true 2021-10-01T23:01:08.3639824Z clean: true 2021-10-01T23:01:08.3640246Z fetch-depth: 1 2021-10-01T23:01:08.3640677Z lfs: false 2021-10-01T23:01:08.3641129Z submodules: false 2021-10-01T23:01:08.3641540Z env: 2021-10-01T23:01:08.3642024Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:01:08.3642535Z TIC_DEPLOY_KEY: 2021-10-01T23:01:08.3643435Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:01:08.3644780Z GITHUB_PAT: *** 2021-10-01T23:01:08.3645681Z COVERALLS_TOKEN: *** 2021-10-01T23:01:08.3646221Z continue-on-error: false 2021-10-01T23:01:08.3646759Z VDIFFR_RUN_TESTS: 2021-10-01T23:01:08.3647208Z ##[endgroup] 2021-10-01T23:01:09.1699492Z Syncing repository: neuroconductor/ciftiTools 2021-10-01T23:01:09.1700972Z ##[group]Getting Git version info 2021-10-01T23:01:09.1702254Z Working directory is '/home/runner/work/ciftiTools/ciftiTools' 2021-10-01T23:01:09.1703948Z [command]/usr/bin/git version 2021-10-01T23:01:09.1704448Z git version 2.33.0 2021-10-01T23:01:09.1706509Z ##[endgroup] 2021-10-01T23:01:09.1707384Z Deleting the contents of '/home/runner/work/ciftiTools/ciftiTools' 2021-10-01T23:01:09.1710049Z ##[group]Initializing the repository 2021-10-01T23:01:09.1710825Z [command]/usr/bin/git init /home/runner/work/ciftiTools/ciftiTools 2021-10-01T23:01:09.1711905Z hint: Using 'master' as the name for the initial branch. This default branch name 2021-10-01T23:01:09.1712810Z hint: is subject to change. To configure the initial branch name to use in all 2021-10-01T23:01:09.1713710Z hint: of your new repositories, which will suppress this warning, call: 2021-10-01T23:01:09.1714338Z hint: 2021-10-01T23:01:09.1715114Z hint: git config --global init.defaultBranch 2021-10-01T23:01:09.1715716Z hint: 2021-10-01T23:01:09.1716475Z hint: Names commonly chosen instead of 'master' are 'main', 'trunk' and 2021-10-01T23:01:09.1717559Z hint: 'development'. The just-created branch can be renamed via this command: 2021-10-01T23:01:09.1718230Z hint: 2021-10-01T23:01:09.1718784Z hint: git branch -m 2021-10-01T23:01:09.1719561Z Initialized empty Git repository in /home/runner/work/ciftiTools/ciftiTools/.git/ 2021-10-01T23:01:09.1720673Z [command]/usr/bin/git remote add origin https://github.com/neuroconductor/ciftiTools 2021-10-01T23:01:09.1722001Z ##[endgroup] 2021-10-01T23:01:09.1723114Z ##[group]Disabling automatic garbage collection 2021-10-01T23:01:09.1723983Z [command]/usr/bin/git config --local gc.auto 0 2021-10-01T23:01:09.1725062Z ##[endgroup] 2021-10-01T23:01:09.1727692Z ##[group]Setting up auth 2021-10-01T23:01:09.1728644Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-10-01T23:01:09.1730266Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-10-01T23:01:09.1731916Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-10-01T23:01:09.1733949Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-10-01T23:01:09.1735934Z [command]/usr/bin/git config --local http.https://github.com/.extraheader AUTHORIZATION: basic *** 2021-10-01T23:01:09.1737378Z ##[endgroup] 2021-10-01T23:01:09.1738618Z ##[group]Fetching the repository 2021-10-01T23:01:09.1740664Z [command]/usr/bin/git -c protocol.version=2 fetch --no-tags --prune --progress --no-recurse-submodules --depth=1 origin +ddbcd44f1c047acb37bd27dee424044a328f8b15:refs/tags/0.6.1.s 2021-10-01T23:01:09.1742287Z remote: Enumerating objects: 272, done. 2021-10-01T23:01:09.1742932Z remote: Counting objects: 0% (1/272) 2021-10-01T23:01:09.1743510Z remote: Counting objects: 1% (3/272) 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2021-10-01T23:01:09.1830041Z remote: Compressing objects: 43% (111/257) 2021-10-01T23:01:09.1830680Z remote: Compressing objects: 44% (114/257) 2021-10-01T23:01:09.1831316Z remote: Compressing objects: 45% (116/257) 2021-10-01T23:01:09.1831934Z remote: Compressing objects: 46% (119/257) 2021-10-01T23:01:09.1832573Z remote: Compressing objects: 47% (121/257) 2021-10-01T23:01:09.1833202Z remote: Compressing objects: 48% (124/257) 2021-10-01T23:01:09.1833818Z remote: Compressing objects: 49% (126/257) 2021-10-01T23:01:09.1834466Z remote: Compressing objects: 50% (129/257) 2021-10-01T23:01:09.1835085Z remote: Compressing objects: 51% (132/257) 2021-10-01T23:01:09.1835735Z remote: Compressing objects: 52% (134/257) 2021-10-01T23:01:09.1836477Z remote: Compressing objects: 53% (137/257) 2021-10-01T23:01:09.1837106Z remote: Compressing objects: 54% (139/257) 2021-10-01T23:01:09.1837744Z remote: Compressing objects: 55% (142/257) 2021-10-01T23:01:09.1838378Z remote: Compressing objects: 56% (144/257) 2021-10-01T23:01:09.1838999Z remote: Compressing objects: 57% (147/257) 2021-10-01T23:01:09.1839634Z remote: Compressing objects: 58% (150/257) 2021-10-01T23:01:09.1840265Z remote: Compressing objects: 59% (152/257) 2021-10-01T23:01:09.1840889Z remote: Compressing objects: 60% (155/257) 2021-10-01T23:01:09.1841527Z remote: Compressing objects: 61% (157/257) 2021-10-01T23:01:09.1842160Z remote: Compressing objects: 62% (160/257) 2021-10-01T23:01:09.1842776Z remote: Compressing objects: 63% (162/257) 2021-10-01T23:01:09.1843412Z remote: Compressing objects: 64% (165/257) 2021-10-01T23:01:09.1844044Z remote: Compressing objects: 65% (168/257) 2021-10-01T23:01:09.1844664Z remote: Compressing objects: 66% (170/257) 2021-10-01T23:01:09.1845299Z remote: Compressing objects: 67% (173/257) 2021-10-01T23:01:09.1845930Z remote: Compressing objects: 68% (175/257) 2021-10-01T23:01:09.1846551Z remote: Compressing objects: 69% (178/257) 2021-10-01T23:01:09.1847182Z remote: Compressing objects: 70% (180/257) 2021-10-01T23:01:09.1847798Z remote: Compressing objects: 71% (183/257) 2021-10-01T23:01:09.1848527Z remote: Compressing objects: 72% (186/257) 2021-10-01T23:01:09.1849160Z remote: Compressing objects: 73% (188/257) 2021-10-01T23:01:09.1849785Z remote: Compressing objects: 74% (191/257) 2021-10-01T23:01:09.1850415Z remote: Compressing objects: 75% (193/257) 2021-10-01T23:01:09.1851044Z remote: Compressing objects: 76% (196/257) 2021-10-01T23:01:09.1851658Z remote: Compressing objects: 77% (198/257) 2021-10-01T23:01:09.1852294Z remote: Compressing objects: 78% (201/257) 2021-10-01T23:01:09.1852931Z remote: Compressing objects: 79% (204/257) 2021-10-01T23:01:09.1853573Z remote: Compressing objects: 80% (206/257) 2021-10-01T23:01:09.1854203Z remote: Compressing objects: 81% (209/257) 2021-10-01T23:01:09.1854834Z remote: Compressing objects: 82% (211/257) 2021-10-01T23:01:09.1855449Z remote: Compressing objects: 83% (214/257) 2021-10-01T23:01:09.1856088Z remote: Compressing objects: 84% (216/257) 2021-10-01T23:01:09.1856766Z remote: Compressing objects: 85% (219/257) 2021-10-01T23:01:09.1857382Z remote: Compressing objects: 86% (222/257) 2021-10-01T23:01:09.1858142Z remote: Compressing objects: 87% (224/257) 2021-10-01T23:01:09.1858800Z remote: Compressing objects: 88% (227/257) 2021-10-01T23:01:09.1859433Z remote: Compressing objects: 89% (229/257) 2021-10-01T23:01:09.1860047Z remote: Compressing objects: 90% (232/257) 2021-10-01T23:01:09.1860689Z remote: Compressing objects: 91% (234/257) 2021-10-01T23:01:09.1861321Z remote: Compressing objects: 92% (237/257) 2021-10-01T23:01:09.1861934Z remote: Compressing objects: 93% (240/257) 2021-10-01T23:01:09.1862567Z remote: Compressing objects: 94% (242/257) 2021-10-01T23:01:09.1863198Z remote: Compressing objects: 95% (245/257) 2021-10-01T23:01:09.1863812Z remote: Compressing objects: 96% (247/257) 2021-10-01T23:01:09.1864450Z remote: Compressing objects: 97% (250/257) 2021-10-01T23:01:09.1865082Z remote: Compressing objects: 98% (252/257) 2021-10-01T23:01:09.1865700Z remote: Compressing objects: 99% (255/257) 2021-10-01T23:01:09.1866331Z remote: Compressing objects: 100% (257/257) 2021-10-01T23:01:09.1866974Z remote: Compressing objects: 100% (257/257), done. 2021-10-01T23:01:09.1867575Z Receiving objects: 0% (1/272) 2021-10-01T23:01:09.1868102Z Receiving objects: 1% (3/272) 2021-10-01T23:01:09.1868608Z Receiving objects: 2% (6/272) 2021-10-01T23:01:09.1869245Z Receiving objects: 3% (9/272) 2021-10-01T23:01:09.1869780Z Receiving objects: 4% (11/272) 2021-10-01T23:01:09.1870291Z Receiving objects: 5% (14/272) 2021-10-01T23:01:09.1870843Z Receiving objects: 6% (17/272) 2021-10-01T23:01:09.1871365Z Receiving objects: 7% (20/272) 2021-10-01T23:01:09.1871868Z Receiving objects: 8% (22/272) 2021-10-01T23:01:09.1941329Z Receiving objects: 9% (25/272) 2021-10-01T23:01:09.1947866Z Receiving objects: 10% (28/272) 2021-10-01T23:01:09.1949002Z Receiving objects: 11% (30/272) 2021-10-01T23:01:09.1949632Z Receiving objects: 12% (33/272) 2021-10-01T23:01:09.1950269Z Receiving objects: 13% (36/272) 2021-10-01T23:01:09.1950955Z Receiving objects: 14% (39/272) 2021-10-01T23:01:09.1951592Z Receiving objects: 15% (41/272) 2021-10-01T23:01:09.1952205Z Receiving objects: 16% (44/272) 2021-10-01T23:01:09.1952842Z Receiving objects: 17% (47/272) 2021-10-01T23:01:09.1953468Z Receiving objects: 18% (49/272) 2021-10-01T23:01:09.1954101Z Receiving objects: 19% (52/272) 2021-10-01T23:01:09.1954734Z Receiving objects: 20% (55/272) 2021-10-01T23:01:09.1955359Z Receiving objects: 21% (58/272) 2021-10-01T23:01:09.1955973Z Receiving objects: 22% (60/272) 2021-10-01T23:01:09.2554814Z Receiving objects: 23% (63/272) 2021-10-01T23:01:09.2555396Z Receiving objects: 24% (66/272) 2021-10-01T23:01:09.2560630Z Receiving objects: 25% (68/272) 2021-10-01T23:01:09.2565593Z Receiving objects: 26% (71/272) 2021-10-01T23:01:09.2581391Z Receiving objects: 27% (74/272) 2021-10-01T23:01:09.2584595Z Receiving objects: 28% (77/272) 2021-10-01T23:01:09.2591595Z Receiving objects: 29% (79/272) 2021-10-01T23:01:09.2595213Z Receiving objects: 30% (82/272) 2021-10-01T23:01:09.4336877Z Receiving objects: 31% (85/272) 2021-10-01T23:01:09.4338727Z Receiving objects: 32% (88/272) 2021-10-01T23:01:09.4339514Z Receiving objects: 33% (90/272) 2021-10-01T23:01:09.4512178Z Receiving objects: 34% (93/272) 2021-10-01T23:01:09.4515682Z Receiving objects: 35% (96/272) 2021-10-01T23:01:09.4800800Z Receiving objects: 36% (98/272) 2021-10-01T23:01:09.5212591Z Receiving objects: 37% (101/272) 2021-10-01T23:01:09.5702278Z Receiving objects: 38% (104/272) 2021-10-01T23:01:09.5957051Z Receiving objects: 39% (107/272) 2021-10-01T23:01:09.6074668Z Receiving objects: 40% (109/272) 2021-10-01T23:01:09.6075486Z Receiving objects: 41% (112/272) 2021-10-01T23:01:09.6076008Z Receiving objects: 42% (115/272) 2021-10-01T23:01:09.6076575Z Receiving objects: 43% (117/272) 2021-10-01T23:01:09.6083153Z Receiving objects: 44% (120/272) 2021-10-01T23:01:09.6083886Z Receiving objects: 45% (123/272) 2021-10-01T23:01:09.6084538Z Receiving objects: 46% (126/272) 2021-10-01T23:01:09.6085180Z Receiving objects: 47% (128/272) 2021-10-01T23:01:09.6088612Z Receiving objects: 48% (131/272) 2021-10-01T23:01:09.6089163Z Receiving objects: 49% (134/272) 2021-10-01T23:01:09.6093314Z Receiving objects: 50% (136/272) 2021-10-01T23:01:09.6093845Z Receiving objects: 51% (139/272) 2021-10-01T23:01:09.6094564Z Receiving objects: 52% (142/272) 2021-10-01T23:01:09.6095215Z Receiving objects: 53% (145/272) 2021-10-01T23:01:09.6098682Z Receiving objects: 54% (147/272) 2021-10-01T23:01:09.6099230Z Receiving objects: 55% (150/272) 2021-10-01T23:01:09.6099921Z Receiving objects: 56% (153/272) 2021-10-01T23:01:09.6102839Z Receiving objects: 57% (156/272) 2021-10-01T23:01:09.6105647Z Receiving objects: 58% (158/272) 2021-10-01T23:01:09.6108444Z Receiving objects: 59% (161/272) 2021-10-01T23:01:09.6111443Z Receiving objects: 60% (164/272) 2021-10-01T23:01:09.6114352Z Receiving objects: 61% (166/272) 2021-10-01T23:01:09.6116825Z Receiving objects: 62% (169/272) 2021-10-01T23:01:09.6120371Z Receiving objects: 63% (172/272) 2021-10-01T23:01:09.6121377Z Receiving objects: 64% (175/272) 2021-10-01T23:01:09.6123352Z Receiving objects: 65% (177/272) 2021-10-01T23:01:09.6125637Z Receiving objects: 66% (180/272) 2021-10-01T23:01:09.6126352Z Receiving objects: 67% (183/272) 2021-10-01T23:01:09.6127275Z Receiving objects: 68% (185/272) 2021-10-01T23:01:09.6127986Z Receiving objects: 69% (188/272) 2021-10-01T23:01:09.6129634Z Receiving objects: 70% (191/272) 2021-10-01T23:01:09.6130336Z Receiving objects: 71% (194/272) 2021-10-01T23:01:09.6131005Z Receiving objects: 72% (196/272) 2021-10-01T23:01:09.6131653Z Receiving objects: 73% (199/272) 2021-10-01T23:01:09.6133148Z Receiving objects: 74% (202/272) 2021-10-01T23:01:09.6133897Z Receiving objects: 75% (204/272) 2021-10-01T23:01:09.6134582Z Receiving objects: 76% (207/272) 2021-10-01T23:01:09.6135256Z Receiving objects: 77% (210/272) 2021-10-01T23:01:09.6139622Z Receiving objects: 78% (213/272) 2021-10-01T23:01:09.6140381Z Receiving objects: 79% (215/272) 2021-10-01T23:01:09.6141038Z Receiving objects: 80% (218/272) 2021-10-01T23:01:09.6141707Z Receiving objects: 81% (221/272) 2021-10-01T23:01:09.6142374Z Receiving objects: 82% (224/272) 2021-10-01T23:01:09.6143034Z Receiving objects: 83% (226/272) 2021-10-01T23:01:09.6143695Z Receiving objects: 84% (229/272) 2021-10-01T23:01:09.6144346Z Receiving objects: 85% (232/272) 2021-10-01T23:01:09.6144996Z Receiving objects: 86% (234/272) 2021-10-01T23:01:09.6145658Z Receiving objects: 87% (237/272) 2021-10-01T23:01:09.6147221Z Receiving objects: 88% (240/272) 2021-10-01T23:01:09.6147987Z Receiving objects: 89% (243/272) 2021-10-01T23:01:09.6148666Z Receiving objects: 90% (245/272) 2021-10-01T23:01:09.6150035Z Receiving objects: 91% (248/272) 2021-10-01T23:01:09.6150942Z Receiving objects: 92% (251/272) 2021-10-01T23:01:09.6151611Z Receiving objects: 93% (253/272) 2021-10-01T23:01:09.6152263Z Receiving objects: 94% (256/272) 2021-10-01T23:01:09.6152933Z Receiving objects: 95% (259/272) 2021-10-01T23:01:09.6153648Z Receiving objects: 96% (262/272) 2021-10-01T23:01:10.0361826Z Receiving objects: 97% (264/272) 2021-10-01T23:01:10.0363337Z Receiving objects: 98% (267/272), 16.85 MiB | 19.27 MiB/s 2021-10-01T23:01:10.2556023Z Receiving objects: 99% (270/272), 16.85 MiB | 19.27 MiB/s 2021-10-01T23:01:10.2566356Z remote: Total 272 (delta 23), reused 91 (delta 11), pack-reused 0 2021-10-01T23:01:10.2574290Z Receiving objects: 99% (271/272), 16.85 MiB | 19.27 MiB/s 2021-10-01T23:01:10.2576159Z Receiving objects: 100% (272/272), 16.85 MiB | 19.27 MiB/s 2021-10-01T23:01:10.2579361Z Receiving objects: 100% (272/272), 20.80 MiB | 18.93 MiB/s, done. 2021-10-01T23:01:10.2580948Z Resolving deltas: 0% (0/23) 2021-10-01T23:01:10.2583420Z Resolving deltas: 4% (1/23) 2021-10-01T23:01:10.2585088Z Resolving deltas: 8% (2/23) 2021-10-01T23:01:10.2703071Z Resolving deltas: 13% (3/23) 2021-10-01T23:01:10.2743875Z Resolving deltas: 17% (4/23) 2021-10-01T23:01:10.2821357Z Resolving deltas: 21% (5/23) 2021-10-01T23:01:10.2842770Z Resolving deltas: 26% (6/23) 2021-10-01T23:01:10.2843434Z Resolving deltas: 30% (7/23) 2021-10-01T23:01:10.2844017Z Resolving deltas: 34% (8/23) 2021-10-01T23:01:10.2844725Z Resolving deltas: 39% (9/23) 2021-10-01T23:01:10.2851352Z Resolving deltas: 43% (10/23) 2021-10-01T23:01:10.2853478Z Resolving deltas: 47% (11/23) 2021-10-01T23:01:10.2854421Z Resolving deltas: 52% (12/23) 2021-10-01T23:01:10.2855844Z Resolving deltas: 56% (13/23) 2021-10-01T23:01:10.2856849Z Resolving deltas: 60% (14/23) 2021-10-01T23:01:10.2858249Z Resolving deltas: 65% (15/23) 2021-10-01T23:01:10.2866440Z Resolving deltas: 69% (16/23) 2021-10-01T23:01:10.2885510Z Resolving deltas: 73% (17/23) 2021-10-01T23:01:10.2886501Z Resolving deltas: 78% (18/23) 2021-10-01T23:01:10.2919547Z Resolving deltas: 82% (19/23) 2021-10-01T23:01:10.2920198Z Resolving deltas: 86% (20/23) 2021-10-01T23:01:10.2920698Z Resolving deltas: 91% (21/23) 2021-10-01T23:01:10.2921205Z Resolving deltas: 95% (22/23) 2021-10-01T23:01:10.2922473Z Resolving deltas: 100% (23/23) 2021-10-01T23:01:10.2927041Z Resolving deltas: 100% (23/23), done. 2021-10-01T23:01:10.3525207Z From https://github.com/neuroconductor/ciftiTools 2021-10-01T23:01:10.3527135Z * [new ref] ddbcd44f1c047acb37bd27dee424044a328f8b15 -> 0.6.1.s 2021-10-01T23:01:10.3529326Z ##[endgroup] 2021-10-01T23:01:10.3530658Z ##[group]Determining the checkout info 2021-10-01T23:01:10.3531882Z ##[endgroup] 2021-10-01T23:01:10.3533042Z ##[group]Checking out the ref 2021-10-01T23:01:10.3534017Z [command]/usr/bin/git checkout --progress --force refs/tags/0.6.1.s 2021-10-01T23:01:10.5866211Z Note: switching to 'refs/tags/0.6.1.s'. 2021-10-01T23:01:10.5901072Z 2021-10-01T23:01:10.5909949Z You are in 'detached HEAD' state. You can look around, make experimental 2021-10-01T23:01:10.5911698Z changes and commit them, and you can discard any commits you make in this 2021-10-01T23:01:10.5912716Z state without impacting any branches by switching back to a branch. 2021-10-01T23:01:10.5913855Z 2021-10-01T23:01:10.5914633Z If you want to create a new branch to retain commits you create, you may 2021-10-01T23:01:10.5915896Z do so (now or later) by using -c with the switch command. Example: 2021-10-01T23:01:10.5916499Z 2021-10-01T23:01:10.5917294Z git switch -c 2021-10-01T23:01:10.5917840Z 2021-10-01T23:01:10.5918405Z Or undo this operation with: 2021-10-01T23:01:10.5918894Z 2021-10-01T23:01:10.5920008Z git switch - 2021-10-01T23:01:10.5920434Z 2021-10-01T23:01:10.5921640Z Turn off this advice by setting config variable advice.detachedHead to false 2021-10-01T23:01:10.5922415Z 2021-10-01T23:01:10.5923005Z HEAD is now at ddbcd44 Version id 203 stable 2021-10-01T23:01:10.5925385Z ##[endgroup] 2021-10-01T23:01:10.5955563Z [command]/usr/bin/git log -1 --format='%H' 2021-10-01T23:01:10.6000496Z 'ddbcd44f1c047acb37bd27dee424044a328f8b15' 2021-10-01T23:01:10.6159429Z ##[group]Run r-lib/actions/setup-r@master 2021-10-01T23:01:10.6159950Z with: 2021-10-01T23:01:10.6160357Z r-version: 3.5 2021-10-01T23:01:10.6160771Z Ncpus: 1 2021-10-01T23:01:10.6161222Z crayon.enabled: NULL 2021-10-01T23:01:10.6161823Z remove-openmp-macos: true 2021-10-01T23:01:10.6162449Z http-user-agent: default 2021-10-01T23:01:10.6162961Z install-r: true 2021-10-01T23:01:10.6163601Z windows-path-include-mingw: true 2021-10-01T23:01:10.6164280Z update-rtools: false 2021-10-01T23:01:10.6164815Z use-public-rspm: false 2021-10-01T23:01:10.6165283Z env: 2021-10-01T23:01:10.6165756Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:01:10.6166279Z TIC_DEPLOY_KEY: 2021-10-01T23:01:10.6167179Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:01:10.6169113Z GITHUB_PAT: *** 2021-10-01T23:01:10.6170023Z COVERALLS_TOKEN: *** 2021-10-01T23:01:10.6170581Z continue-on-error: false 2021-10-01T23:01:10.6171151Z VDIFFR_RUN_TESTS: 2021-10-01T23:01:10.6171597Z ##[endgroup] 2021-10-01T23:01:13.4952869Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive add-apt-repository -y ppa:cran/travis 2021-10-01T23:01:15.4226620Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-10-01T23:01:15.4229156Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease [114 kB] 2021-10-01T23:01:15.4234692Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease [101 kB] 2021-10-01T23:01:15.4258866Z Get:4 http://security.ubuntu.com/ubuntu focal-security InRelease [114 kB] 2021-10-01T23:01:15.4302820Z Get:5 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease [10.5 kB] 2021-10-01T23:01:15.5507666Z Get:6 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease [18.0 kB] 2021-10-01T23:01:15.7820209Z Hit:7 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-10-01T23:01:15.7983761Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 Packages [1256 kB] 2021-10-01T23:01:15.8502867Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 c-n-f Metadata [14.4 kB] 2021-10-01T23:01:15.8512310Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 Packages [864 kB] 2021-10-01T23:01:15.8640728Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe Translation-en [184 kB] 2021-10-01T23:01:16.0463432Z Get:12 https://packages.microsoft.com/ubuntu/20.04/prod focal/main amd64 Packages [99.4 kB] 2021-10-01T23:01:16.1803137Z Get:13 http://security.ubuntu.com/ubuntu focal-security/universe amd64 Packages [641 kB] 2021-10-01T23:01:16.2293595Z Get:14 http://security.ubuntu.com/ubuntu focal-security/universe Translation-en [102 kB] 2021-10-01T23:01:23.6077046Z Fetched 3518 kB in 1s (3348 kB/s) 2021-10-01T23:01:24.5592589Z Reading package lists... 2021-10-01T23:01:24.5851855Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get update -y -qq 2021-10-01T23:01:26.5890336Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get install -y gdebi-core qpdf devscripts 2021-10-01T23:01:26.6631899Z Reading package lists... 2021-10-01T23:01:26.8657691Z Building dependency tree... 2021-10-01T23:01:26.8678694Z Reading state information... 2021-10-01T23:01:27.0435895Z The following additional packages will be installed: 2021-10-01T23:01:27.0438360Z dctrl-tools diffstat dput gettext intltool-debian libapt-pkg-perl 2021-10-01T23:01:27.0440062Z libarchive-zip-perl libarray-intspan-perl libasync-mergepoint-perl 2021-10-01T23:01:27.0443404Z libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl 2021-10-01T23:01:27.0445486Z libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl 2021-10-01T23:01:27.0448292Z libconst-fast-perl libcontextual-return-perl libcpanel-json-xs-perl 2021-10-01T23:01:27.0450203Z libcroco3 libdata-optlist-perl libdevel-callchecker-perl libdevel-size-perl 2021-10-01T23:01:27.0452534Z libdigest-bubblebabble-perl libdigest-hmac-perl libdistro-info-perl 2021-10-01T23:01:27.0454625Z libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl 2021-10-01T23:01:27.0456461Z libfile-chdir-perl libfile-find-rule-perl libfile-homedir-perl 2021-10-01T23:01:27.0459199Z libfile-which-perl libfont-ttf-perl libfuture-perl 2021-10-01T23:01:27.0470897Z libgetopt-long-descriptive-perl libgit-wrapper-perl libgitlab-api-v4-perl 2021-10-01T23:01:27.0473134Z libhash-fieldhash-perl libhttp-tiny-multipart-perl libimport-into-perl 2021-10-01T23:01:27.0475310Z libio-async-loop-epoll-perl libio-async-perl libio-prompter-perl 2021-10-01T23:01:27.0476900Z libio-pty-perl libio-string-perl libipc-run-perl libjson-maybexs-perl 2021-10-01T23:01:27.0478365Z liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl 2021-10-01T23:01:27.0479808Z liblist-someutils-perl liblist-someutils-xs-perl 2021-10-01T23:01:27.0481388Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-10-01T23:01:27.0483155Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-10-01T23:01:27.0484673Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-10-01T23:01:27.0486011Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-10-01T23:01:27.0487386Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-10-01T23:01:27.0488918Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-10-01T23:01:27.0490569Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-10-01T23:01:27.0492099Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-10-01T23:01:27.0493548Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-10-01T23:01:27.0495110Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-10-01T23:01:27.0496660Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-10-01T23:01:27.0498370Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-10-01T23:01:27.0499981Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-10-01T23:01:27.0501873Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-10-01T23:01:27.0503532Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-10-01T23:01:27.0505209Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-10-01T23:01:27.0506728Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-10-01T23:01:27.0508144Z libtype-tiny-perl libtype-tiny-xs-perl libunicode-utf8-perl 2021-10-01T23:01:27.0509637Z libvariable-magic-perl libwant-perl libxml-writer-perl libyaml-libyaml-perl 2021-10-01T23:01:27.0511094Z licensecheck lintian patchutils python3-gpg python3-magic python3-unidiff 2021-10-01T23:01:27.0512050Z python3-xdg t1utils wdiff 2021-10-01T23:01:27.0512593Z Suggested packages: 2021-10-01T23:01:27.0513535Z debtags adequate autopkgtest bls-standalone bsd-mailx | mailx 2021-10-01T23:01:27.0514787Z check-all-the-things cvs-buildpackage debhelper devscripts-el diffoscope 2021-10-01T23:01:27.0516144Z disorderfs dose-extra duck faketime gnuplot how-can-i-help libdbd-pg-perl 2021-10-01T23:01:27.0517524Z libnet-smtps-perl libterm-size-perl libyaml-syck-perl mozilla-devscripts 2021-10-01T23:01:27.0518870Z mutt piuparts quilt ratt reprotest svn-buildpackage w3m debian-keyring 2021-10-01T23:01:27.0520146Z equivs libsoap-lite-perl python3-paramiko mini-dinstall gettext-doc 2021-10-01T23:01:27.0521422Z autopoint libasprintf-dev libgettextpo-dev libossp-uuid-perl 2021-10-01T23:01:27.0522849Z libscalar-number-perl libbareword-filehandles-perl libindirect-perl 2021-10-01T23:01:27.0524512Z libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl 2021-10-01T23:01:27.0525948Z binutils-multiarch libtext-template-perl wdiff-doc 2021-10-01T23:01:27.1343253Z The following NEW packages will be installed: 2021-10-01T23:01:27.1350474Z dctrl-tools devscripts diffstat dput gdebi-core gettext intltool-debian 2021-10-01T23:01:27.1352082Z libapt-pkg-perl libarchive-zip-perl libarray-intspan-perl 2021-10-01T23:01:27.1353830Z libasync-mergepoint-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl 2021-10-01T23:01:27.1355809Z libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl 2021-10-01T23:01:27.1357551Z libclone-perl libconst-fast-perl libcontextual-return-perl 2021-10-01T23:01:27.1359001Z libcpanel-json-xs-perl libcroco3 libdata-optlist-perl 2021-10-01T23:01:27.1360631Z libdevel-callchecker-perl libdevel-size-perl libdigest-bubblebabble-perl 2021-10-01T23:01:27.1363753Z libdigest-hmac-perl libdistro-info-perl libdynaloader-functions-perl 2021-10-01T23:01:27.1365698Z libemail-valid-perl libexporter-tiny-perl libfile-chdir-perl 2021-10-01T23:01:27.1367434Z libfile-find-rule-perl libfile-homedir-perl libfile-which-perl 2021-10-01T23:01:27.1369188Z libfont-ttf-perl libfuture-perl libgetopt-long-descriptive-perl 2021-10-01T23:01:27.1370954Z libgit-wrapper-perl libgitlab-api-v4-perl libhash-fieldhash-perl 2021-10-01T23:01:27.1372828Z libhttp-tiny-multipart-perl libimport-into-perl libio-async-loop-epoll-perl 2021-10-01T23:01:27.1374669Z libio-async-perl libio-prompter-perl libio-pty-perl libio-string-perl 2021-10-01T23:01:27.1376327Z libipc-run-perl libjson-maybexs-perl liblinux-epoll-perl 2021-10-01T23:01:27.1378237Z liblist-compare-perl liblist-moreutils-perl liblist-someutils-perl 2021-10-01T23:01:27.1380123Z liblist-someutils-xs-perl liblog-any-adapter-screen-perl liblog-any-perl 2021-10-01T23:01:27.1382102Z libmodule-implementation-perl libmodule-runtime-perl libmoo-perl 2021-10-01T23:01:27.1386748Z libmoox-aliases-perl libmoox-struct-perl libnamespace-clean-perl 2021-10-01T23:01:27.1388286Z libnet-dns-perl libnet-dns-sec-perl libnet-domain-tld-perl libnet-ip-perl 2021-10-01T23:01:27.1389798Z libnet-libidn-perl libnumber-compare-perl libnumber-range-perl 2021-10-01T23:01:27.1391310Z libobject-id-perl libpackage-stash-perl libpackage-stash-xs-perl 2021-10-01T23:01:27.1392840Z libparams-classify-perl libparams-util-perl libparams-validate-perl 2021-10-01T23:01:27.1394441Z libpath-iterator-rule-perl libpath-tiny-perl libperl4-corelibs-perl 2021-10-01T23:01:27.1396045Z libperlio-gzip-perl libpod-constants-perl libqpdf26 libre-engine-re2-perl 2021-10-01T23:01:27.1397442Z libreadonly-perl libref-util-perl libref-util-xs-perl 2021-10-01T23:01:27.1398942Z libregexp-pattern-license-perl libregexp-pattern-perl librole-tiny-perl 2021-10-01T23:01:27.1400544Z libsereal-decoder-perl libsereal-encoder-perl libsereal-perl 2021-10-01T23:01:27.1401916Z libsort-key-perl libsort-versions-perl libstrictures-perl 2021-10-01T23:01:27.1403455Z libstring-copyright-perl libstring-escape-perl libstring-shellquote-perl 2021-10-01T23:01:27.1405235Z libstruct-dumb-perl libsub-exporter-perl libsub-exporter-progressive-perl 2021-10-01T23:01:27.1406929Z libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl 2021-10-01T23:01:27.1408417Z libterm-readkey-perl libtest-fatal-perl libtest-refcount-perl 2021-10-01T23:01:27.1409832Z libtext-glob-perl libtext-levenshtein-perl libtype-tiny-perl 2021-10-01T23:01:27.1411255Z libtype-tiny-xs-perl libunicode-utf8-perl libvariable-magic-perl 2021-10-01T23:01:27.1412786Z libwant-perl libxml-writer-perl libyaml-libyaml-perl licensecheck lintian 2021-10-01T23:01:27.1414162Z patchutils python3-gpg python3-magic python3-unidiff python3-xdg qpdf 2021-10-01T23:01:27.1414898Z t1utils wdiff 2021-10-01T23:01:27.1846139Z 0 upgraded, 126 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:01:27.2439131Z Need to get 8452 kB of archives. 2021-10-01T23:01:27.2439978Z After this operation, 31.7 MB of additional disk space will be used. 2021-10-01T23:01:27.2441811Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dctrl-tools amd64 2.24-3 [61.5 kB] 2021-10-01T23:01:27.2501724Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-which-perl all 1.23-1 [13.8 kB] 2021-10-01T23:01:27.2509212Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-homedir-perl all 1.004-1 [37.3 kB] 2021-10-01T23:01:27.2520120Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-pty-perl amd64 1:1.12-1 [32.4 kB] 2021-10-01T23:01:27.2533273Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libipc-run-perl all 20180523.0-2 [89.7 kB] 2021-10-01T23:01:27.2561922Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-method-modifiers-perl all 2.13-1 [16.2 kB] 2021-10-01T23:01:27.2572737Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-op-check-perl amd64 0.22-1build2 [10.2 kB] 2021-10-01T23:01:27.2579366Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdynaloader-functions-perl all 0.003-1 [11.9 kB] 2021-10-01T23:01:27.2585723Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-callchecker-perl amd64 0.008-1ubuntu1 [14.5 kB] 2021-10-01T23:01:27.2592263Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-classify-perl amd64 0.015-1build2 [21.1 kB] 2021-10-01T23:01:27.2597979Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-runtime-perl all 0.016-1 [16.2 kB] 2021-10-01T23:01:27.2603717Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimport-into-perl all 1.002005-1 [11.0 kB] 2021-10-01T23:01:27.2609499Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librole-tiny-perl all 2.001004-1 [16.5 kB] 2021-10-01T23:01:27.2619828Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstrictures-perl all 2.000006-1 [16.3 kB] 2021-10-01T23:01:27.2625124Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-quote-perl all 2.006006-1 [19.5 kB] 2021-10-01T23:01:27.2630813Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoo-perl all 2.003006-1 [46.3 kB] 2021-10-01T23:01:27.2638096Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 patchutils amd64 0.3.4-2 [71.1 kB] 2021-10-01T23:01:27.2650513Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 wdiff amd64 1.2.2-2build1 [29.8 kB] 2021-10-01T23:01:27.2663316Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 devscripts amd64 2.20.2ubuntu2 [940 kB] 2021-10-01T23:01:27.2885751Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 diffstat amd64 1.63-1 [27.2 kB] 2021-10-01T23:01:27.2896469Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-gpg amd64 1.13.1-7ubuntu2 [165 kB] 2021-10-01T23:01:27.2920417Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dput all 1.0.3ubuntu1 [42.3 kB] 2021-10-01T23:01:27.2931319Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdebi-core all 0.9.5.7+nmu3 [116 kB] 2021-10-01T23:01:27.2943783Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB] 2021-10-01T23:01:27.2957013Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gettext amd64 0.19.8.1-10build1 [895 kB] 2021-10-01T23:01:27.3063490Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] 2021-10-01T23:01:27.3072304Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libapt-pkg-perl amd64 0.1.36build3 [68.5 kB] 2021-10-01T23:01:27.3082705Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-zip-perl all 1.67-2 [90.5 kB] 2021-10-01T23:01:27.3094980Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarray-intspan-perl all 2.003-1 [23.3 kB] 2021-10-01T23:01:27.3103543Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasync-mergepoint-perl all 0.04-2 [10.2 kB] 2021-10-01T23:01:27.3111312Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-implementation-perl all 0.09-1 [12.2 kB] 2021-10-01T23:01:27.3117672Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [6784 B] 2021-10-01T23:01:27.3124445Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvariable-magic-perl amd64 0.62-1build2 [34.4 kB] 2021-10-01T23:01:27.3131400Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-endofscope-perl all 0.24-1 [16.8 kB] 2021-10-01T23:01:27.3139168Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcapture-tiny-perl all 0.48-1 [20.4 kB] 2021-10-01T23:01:27.3146282Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-xsaccessor-perl amd64 1.19-3build3 [33.6 kB] 2021-10-01T23:01:27.3156978Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclone-perl amd64 0.43-2 [11.0 kB] 2021-10-01T23:01:27.3158763Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-util-perl amd64 1.07-3build5 [19.7 kB] 2021-10-01T23:01:27.3165620Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-install-perl all 0.928-1 [10.5 kB] 2021-10-01T23:01:27.3173575Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdata-optlist-perl all 0.110-1 [9956 B] 2021-10-01T23:01:27.3180038Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-perl all 0.987-1 [44.9 kB] 2021-10-01T23:01:27.3190246Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libconst-fast-perl all 0.014-1 [7958 B] 2021-10-01T23:01:27.3192050Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwant-perl amd64 0.29-1build4 [24.2 kB] 2021-10-01T23:01:27.3199769Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcontextual-return-perl all 0.004014-2 [53.1 kB] 2021-10-01T23:01:27.3209213Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcpanel-json-xs-perl amd64 4.19-1build1 [109 kB] 2021-10-01T23:01:27.3224096Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-bubblebabble-perl all 0.02-2 [7908 B] 2021-10-01T23:01:27.3236091Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.3 kB] 2021-10-01T23:01:27.3238314Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdistro-info-perl all 0.23ubuntu1 [4668 B] 2021-10-01T23:01:27.3240152Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-ip-perl all 1.26-2 [27.4 kB] 2021-10-01T23:01:27.3262700Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-perl all 1.22-1 [336 kB] 2021-10-01T23:01:27.3299974Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-domain-tld-perl all 1.75-1 [29.1 kB] 2021-10-01T23:01:27.3308660Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libemail-valid-perl all 1.202-1 [16.3 kB] 2021-10-01T23:01:27.3317147Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libexporter-tiny-perl all 1.002001-1 [35.5 kB] 2021-10-01T23:01:27.3327791Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-chdir-perl all 0.1008-1 [11.7 kB] 2021-10-01T23:01:27.3336673Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-compare-perl all 0.03-1 [7318 B] 2021-10-01T23:01:27.3340025Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-glob-perl all 0.10-1 [7554 B] 2021-10-01T23:01:27.3347956Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-find-rule-perl all 0.34-1 [28.3 kB] 2021-10-01T23:01:27.3357737Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-string-perl all 1.08-3 [11.1 kB] 2021-10-01T23:01:27.3360149Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfont-ttf-perl all 1.06-1 [313 kB] 2021-10-01T23:01:27.3391452Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfuture-perl all 0.43-1 [77.8 kB] 2021-10-01T23:01:27.3402781Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-validate-perl amd64 1.29-3 [52.7 kB] 2021-10-01T23:01:27.3411483Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgetopt-long-descriptive-perl all 0.104-1 [24.6 kB] 2021-10-01T23:01:27.3441888Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-versions-perl all 1.62-1 [9294 B] 2021-10-01T23:01:27.3451895Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgit-wrapper-perl all 0.048-1 [29.9 kB] 2021-10-01T23:01:27.3463750Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhttp-tiny-multipart-perl all 0.08-1 [8488 B] 2021-10-01T23:01:27.3473516Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-prompter-perl all 0.004015-1 [58.1 kB] 2021-10-01T23:01:27.3486964Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-perl all 1.708-1 [67.8 kB] 2021-10-01T23:01:27.3502898Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-adapter-screen-perl all 0.140-1 [12.1 kB] 2021-10-01T23:01:27.3512283Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-perl all 0.38-1 [19.1 kB] 2021-10-01T23:01:27.3522856Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-identify-perl amd64 0.14-1build2 [10.7 kB] 2021-10-01T23:01:27.3532613Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-name-perl amd64 0.26-1 [11.5 kB] 2021-10-01T23:01:27.3543008Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnamespace-clean-perl all 0.27-1 [13.6 kB] 2021-10-01T23:01:27.3553381Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-tiny-perl all 0.108-1 [42.6 kB] 2021-10-01T23:01:27.3564962Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-perl all 1.008001-2 [304 kB] 2021-10-01T23:01:27.3610185Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgitlab-api-v4-perl all 0.25-1 [83.8 kB] 2021-10-01T23:01:27.3627047Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhash-fieldhash-perl amd64 0.15-1build2 [16.9 kB] 2021-10-01T23:01:27.3633612Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstruct-dumb-perl all 0.09-1 [10.5 kB] 2021-10-01T23:01:27.3640539Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-perl all 0.75-1 [254 kB] 2021-10-01T23:01:27.3666055Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.0 kB] 2021-10-01T23:01:27.3673809Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-loop-epoll-perl all 0.20-1 [10.4 kB] 2021-10-01T23:01:27.3680809Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-maybexs-perl all 1.004000-1 [11.0 kB] 2021-10-01T23:01:27.3687312Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-compare-perl all 0.53-1 [65.6 kB] 2021-10-01T23:01:27.3697267Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-moreutils-perl amd64 0.416-1build5 [55.5 kB] 2021-10-01T23:01:27.3705982Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-perl all 0.58-1 [29.7 kB] 2021-10-01T23:01:27.3714049Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-xs-perl amd64 0.58-2 [32.5 kB] 2021-10-01T23:01:27.3722925Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-aliases-perl all 0.001006-1 [7176 B] 2021-10-01T23:01:27.3729327Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libobject-id-perl all 0.1.2-2ubuntu1 [15.9 kB] 2021-10-01T23:01:27.3737073Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-struct-perl all 0.017-1 [23.4 kB] 2021-10-01T23:01:27.3745149Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-sec-perl amd64 1.15-1 [44.6 kB] 2021-10-01T23:01:27.3752829Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-libidn-perl amd64 0.12.ds-3build2 [17.3 kB] 2021-10-01T23:01:27.3761012Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-range-perl all 0.12-1 [8556 B] 2021-10-01T23:01:27.3767899Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-xs-perl amd64 0.29-1build1 [18.4 kB] 2021-10-01T23:01:27.3776082Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-iterator-rule-perl all 1.014-1 [49.5 kB] 2021-10-01T23:01:27.3782986Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperl4-corelibs-perl all 0.004-2 [37.4 kB] 2021-10-01T23:01:27.3791846Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperlio-gzip-perl amd64 0.19-1build5 [14.6 kB] 2021-10-01T23:01:27.3798791Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpod-constants-perl all 0.19-1 [16.0 kB] 2021-10-01T23:01:27.3806073Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libqpdf26 amd64 9.1.1-1ubuntu0.1 [421 kB] 2021-10-01T23:01:27.3855445Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libre-engine-re2-perl amd64 0.13-5 [16.2 kB] 2021-10-01T23:01:27.3863862Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libreadonly-perl all 2.050-2 [19.9 kB] 2021-10-01T23:01:27.3871269Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-perl all 0.204-1 [15.0 kB] 2021-10-01T23:01:27.3878265Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-xs-perl amd64 0.117-1build2 [12.0 kB] 2021-10-01T23:01:27.3929771Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-license-perl all 3.2.0-1 [36.2 kB] 2021-10-01T23:01:27.3974710Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-perl all 0.2.12-1 [17.1 kB] 2021-10-01T23:01:27.3983629Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-decoder-perl amd64 4.011+ds-1build1 [102 kB] 2021-10-01T23:01:27.4047298Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-encoder-perl amd64 4.011+ds-1build1 [104 kB] 2021-10-01T23:01:27.4080223Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-perl all 4.011-1 [8604 B] 2021-10-01T23:01:27.4088616Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-key-perl amd64 1.33-2build2 [35.4 kB] 2021-10-01T23:01:27.4099038Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-copyright-perl all 0.003006-1 [9608 B] 2021-10-01T23:01:27.4110208Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-escape-perl all 2010.002-2 [17.6 kB] 2021-10-01T23:01:27.4118730Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-shellquote-perl all 1.04-1 [12.0 kB] 2021-10-01T23:01:27.4126276Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libterm-readkey-perl amd64 2.38-1build1 [24.6 kB] 2021-10-01T23:01:27.4134341Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-fatal-perl all 0.014-1 [11.1 kB] 2021-10-01T23:01:27.4141742Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-refcount-perl all 0.10-1 [11.4 kB] 2021-10-01T23:01:27.4148259Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-levenshtein-perl all 0.13-1 [9612 B] 2021-10-01T23:01:27.4156141Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-xs-perl amd64 0.016-1 [22.9 kB] 2021-10-01T23:01:27.4163600Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libunicode-utf8-perl amd64 0.62-1build1 [18.1 kB] 2021-10-01T23:01:27.4171417Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxml-writer-perl all 0.625-1 [24.9 kB] 2021-10-01T23:01:27.4178602Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [28.5 kB] 2021-10-01T23:01:27.4185784Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 licensecheck all 3.0.45-1 [23.9 kB] 2021-10-01T23:01:27.4192103Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-size-perl amd64 0.83-1build1 [20.0 kB] 2021-10-01T23:01:27.4198991Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 t1utils amd64 1.41-3 [56.1 kB] 2021-10-01T23:01:27.4207367Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 lintian all 2.62.0ubuntu1 [981 kB] 2021-10-01T23:01:27.4408982Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-unidiff all 0.5.5-2 [9180 B] 2021-10-01T23:01:27.4414849Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-xdg all 0.26-1ubuntu1 [36.1 kB] 2021-10-01T23:01:27.4421609Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 qpdf amd64 9.1.1-1ubuntu0.1 [475 kB] 2021-10-01T23:01:27.4487350Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-magic all 2:0.4.15-3 [9376 B] 2021-10-01T23:01:28.2583063Z Fetched 8452 kB in 0s (37.0 MB/s) 2021-10-01T23:01:28.3033330Z Selecting previously unselected package dctrl-tools. 2021-10-01T23:01:28.3356348Z (Reading database ... 2021-10-01T23:01:28.3357335Z (Reading database ... 5% 2021-10-01T23:01:28.3358370Z (Reading database ... 10% 2021-10-01T23:01:28.3359022Z (Reading database ... 15% 2021-10-01T23:01:28.3359756Z (Reading database ... 20% 2021-10-01T23:01:28.3360456Z (Reading database ... 25% 2021-10-01T23:01:28.3361112Z (Reading database ... 30% 2021-10-01T23:01:28.3361863Z (Reading database ... 35% 2021-10-01T23:01:28.3362563Z (Reading database ... 40% 2021-10-01T23:01:28.3363197Z (Reading database ... 45% 2021-10-01T23:01:28.3363888Z (Reading database ... 50% 2021-10-01T23:01:28.3801076Z (Reading database ... 55% 2021-10-01T23:01:28.4442842Z (Reading database ... 60% 2021-10-01T23:01:28.4969080Z (Reading database ... 65% 2021-10-01T23:01:28.5419789Z (Reading database ... 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r-3.5.3 (1) ... 2021-10-01T23:02:10.4855322Z 2021-10-01T23:02:10.4856484Z 2021-10-01T23:02:10.4857244Z Reading state information... Done 2021-10-01T23:02:10.5120819Z [command]/usr/bin/sudo ln -sf /opt/R/3.5.3/bin/R /usr/local/bin/R 2021-10-01T23:02:10.5237223Z [command]/usr/bin/sudo ln -sf /opt/R/3.5.3/bin/Rscript /usr/local/bin/Rscript 2021-10-01T23:02:10.5527710Z ##[group]Run r-lib/actions/setup-tinytex@master 2021-10-01T23:02:10.5528298Z env: 2021-10-01T23:02:10.5528779Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:02:10.5529306Z TIC_DEPLOY_KEY: 2021-10-01T23:02:10.5530194Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:02:10.5532159Z GITHUB_PAT: *** 2021-10-01T23:02:10.5533061Z COVERALLS_TOKEN: *** 2021-10-01T23:02:10.5533621Z continue-on-error: false 2021-10-01T23:02:10.5534141Z VDIFFR_RUN_TESTS: 2021-10-01T23:02:10.5534706Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:02:10.5535211Z TZ: UTC 2021-10-01T23:02:10.5535641Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:02:10.5536107Z NOT_CRAN: true 2021-10-01T23:02:10.5536519Z ##[endgroup] 2021-10-01T23:02:10.6123001Z [command]sudo apt-get install -y texinfo 2021-10-01T23:02:10.8004333Z Reading package lists... 2021-10-01T23:02:10.9814751Z Building dependency tree... 2021-10-01T23:02:10.9836866Z Reading state information... 2021-10-01T23:02:11.1327112Z texinfo is already the newest version (6.7.0.dfsg.2-5). 2021-10-01T23:02:11.2168328Z 0 upgraded, 0 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:02:11.6679204Z [command]sh /home/runner/work/_temp/install-unx.sh 2021-10-01T23:02:11.7406101Z --2021-10-01 23:02:11-- https://yihui.org/tinytex/TinyTeX-1.tar.gz 2021-10-01T23:02:11.7547182Z Resolving yihui.org (yihui.org)... 76.223.126.88 2021-10-01T23:02:11.7565374Z Connecting to yihui.org (yihui.org)|76.223.126.88|:443... connected. 2021-10-01T23:02:11.8144041Z HTTP request sent, awaiting response... 301 Moved Permanently 2021-10-01T23:02:11.8147667Z Location: https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu [following] 2021-10-01T23:02:11.8150835Z --2021-10-01 23:02:11-- https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu 2021-10-01T23:02:11.8615774Z Resolving ci.appveyor.com (ci.appveyor.com)... 138.91.141.243 2021-10-01T23:02:11.9268962Z Connecting to ci.appveyor.com (ci.appveyor.com)|138.91.141.243|:443... connected. 2021-10-01T23:02:12.1527121Z HTTP request sent, awaiting response... 302 Found 2021-10-01T23:02:12.1533851Z Location: https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1728/2ccgxjuxwak153x5/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=KmW34fCYderOU6u012Ufg12invYLR%2F%2BhBrWPWhrzemI%3D&st=2021-10-01T23%3A01%3A12Z&se=2021-10-01T23%3A07%3A12Z&sp=r [following] 2021-10-01T23:02:12.1538812Z --2021-10-01 23:02:12-- https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1728/2ccgxjuxwak153x5/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=KmW34fCYderOU6u012Ufg12invYLR%2F%2BhBrWPWhrzemI%3D&st=2021-10-01T23%3A01%3A12Z&se=2021-10-01T23%3A07%3A12Z&sp=r 2021-10-01T23:02:12.1651582Z Resolving appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)... 52.239.228.196 2021-10-01T23:02:12.2371295Z Connecting to appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)|52.239.228.196|:443... connected. 2021-10-01T23:02:12.5138256Z HTTP request sent, awaiting response... 200 OK 2021-10-01T23:02:12.5139887Z Length: 67613813 (64M) [application/octet-stream] 2021-10-01T23:02:12.5141898Z Saving to: ‘TinyTeX.tar.gz’ 2021-10-01T23:02:13.2291134Z 2021-10-01T23:02:15.0109674Z 0K ........ ........ ........ ........ 49% 13.3M 2s 2021-10-01T23:02:16.2915518Z 32768K ........ ........ ........ ........ 99% 24.7M 0s 2021-10-01T23:02:16.2916692Z 65536K 100% 6.48M=3.8s 2021-10-01T23:02:16.2917357Z 2021-10-01T23:02:16.2919445Z 2021-10-01 23:02:16 (17.1 MB/s) - ‘TinyTeX.tar.gz’ saved [67613813/67613813] 2021-10-01T23:02:16.2919977Z 2021-10-01T23:02:19.9342852Z tlmgr: setting option sys_bin to /home/runner/bin. 2021-10-01T23:02:19.9343937Z tlmgr: updating /home/runner/.TinyTeX/tlpkg/texlive.tlpdb 2021-10-01T23:02:20.6704084Z ##[group]Run tlmgr update --self 2021-10-01T23:02:20.6704721Z tlmgr update --self 2021-10-01T23:02:20.6705701Z tlmgr install filecontents upquote courier courier-scaled biber biblatex collection-luatex ae thumbpdf grfext 2021-10-01T23:02:20.6706651Z tlmgr update --all 2021-10-01T23:02:20.6759111Z shell: /usr/bin/bash -e {0} 2021-10-01T23:02:20.6759565Z env: 2021-10-01T23:02:20.6760071Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:02:20.6760612Z TIC_DEPLOY_KEY: 2021-10-01T23:02:20.6761518Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:02:20.6763554Z GITHUB_PAT: *** 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[70/97, 00:06/00:06] install: odsfile [5k] 2021-10-01T23:02:29.1005728Z [71/97, 00:06/00:06] install: optex.x86_64-linux [1k] 2021-10-01T23:02:29.1691046Z [72/97, 00:06/00:06] install: optex [782k] 2021-10-01T23:02:29.2570736Z [73/97, 00:06/00:06] install: pdfarticle [4k] 2021-10-01T23:02:29.3008672Z [74/97, 00:06/00:06] install: pdfextra [25k] 2021-10-01T23:02:29.3501210Z [75/97, 00:06/00:06] install: penlight [98k] 2021-10-01T23:02:29.4094962Z [76/97, 00:06/00:06] install: placeat [4k] 2021-10-01T23:02:29.4540944Z [77/97, 00:06/00:06] install: plantuml [3k] 2021-10-01T23:02:29.4983364Z [78/97, 00:06/00:06] install: pyluatex [6k] 2021-10-01T23:02:29.5428991Z [79/97, 00:06/00:06] install: rsfs [55k] 2021-10-01T23:02:29.5953868Z [80/97, 00:06/00:06] install: selnolig [53k] 2021-10-01T23:02:29.6471884Z [81/97, 00:06/00:06] install: spelling [14k] 2021-10-01T23:02:29.6952587Z [82/97, 00:06/00:06] install: stricttex [2k] 2021-10-01T23:02:29.7389884Z [83/97, 00:06/00:06] install: texlive-common [1k] 2021-10-01T23:02:29.7828733Z [84/97, 00:06/00:06] install: texlive-en [1k] 2021-10-01T23:02:29.8281178Z [85/97, 00:06/00:06] install: texlive-msg-translations [144k] 2021-10-01T23:02:29.8913828Z [86/97, 00:06/00:06] install: thumbpdf.x86_64-linux [1k] 2021-10-01T23:02:29.9360256Z [87/97, 00:06/00:06] install: thumbpdf [19k] 2021-10-01T23:02:29.9823478Z [88/97, 00:06/00:06] install: tlshell.x86_64-linux [1k] 2021-10-01T23:02:30.0298436Z [89/97, 00:07/00:07] install: tlshell [29k] 2021-10-01T23:02:30.0784285Z [90/97, 00:07/00:07] install: typewriter [25k] 2021-10-01T23:02:30.1287147Z [91/97, 00:07/00:07] install: uninormalize [6k] 2021-10-01T23:02:30.1740084Z [92/97, 00:07/00:07] install: upquote [2k] 2021-10-01T23:02:30.2281611Z [93/97, 00:07/00:07] install: xdvi.x86_64-linux [530k] 2021-10-01T23:02:30.3294968Z [94/97, 00:07/00:07] install: xdvi [7k] 2021-10-01T23:02:30.3751087Z [95/97, 00:07/00:07] install: yamlvars [9k] 2021-10-01T23:02:30.4203810Z [96/97, 00:07/00:07] install: collection-basic [1k] 2021-10-01T23:02:30.4658858Z [97/97, 00:07/00:07] install: collection-luatex [1k] 2021-10-01T23:02:30.4897652Z running mktexlsr ... 2021-10-01T23:02:30.5837047Z done running mktexlsr. 2021-10-01T23:02:30.6172008Z running updmap-sys ... 2021-10-01T23:02:30.9175589Z done running updmap-sys. 2021-10-01T23:02:30.9177180Z regenerating fmtutil.cnf in /home/runner/.TinyTeX/texmf-dist 2021-10-01T23:02:30.9179835Z running fmtutil-sys --byfmt optex --no-error-if-no-engine=luajithbtex,luajittex,mfluajit --status-file=/tmp/3vjxtMooU_/tBXNC2fOpp ... 2021-10-01T23:02:31.3254545Z OK: optex.fmt/luatex 2021-10-01T23:02:31.3256721Z tlmgr: package log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr.log 2021-10-01T23:02:31.3258813Z tlmgr: command log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr-commands.log 2021-10-01T23:02:32.7385505Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-10-01T23:02:33.6775889Z tlmgr: no updates available 2021-10-01T23:02:33.6855386Z ##[group]Run r-lib/actions/setup-pandoc@master 2021-10-01T23:02:33.6855969Z with: 2021-10-01T23:02:33.6856409Z pandoc-version: 2.7.3 2021-10-01T23:02:33.6856858Z env: 2021-10-01T23:02:33.6857349Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:02:33.6858207Z TIC_DEPLOY_KEY: 2021-10-01T23:02:33.6859103Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:02:33.6861655Z GITHUB_PAT: *** 2021-10-01T23:02:33.6862577Z COVERALLS_TOKEN: *** 2021-10-01T23:02:33.6863492Z continue-on-error: false 2021-10-01T23:02:33.6864037Z VDIFFR_RUN_TESTS: 2021-10-01T23:02:33.6864569Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:02:33.6865076Z TZ: UTC 2021-10-01T23:02:33.6865517Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:02:33.6865970Z NOT_CRAN: true 2021-10-01T23:02:33.6866398Z ##[endgroup] 2021-10-01T23:02:34.0603751Z [command]sudo apt-get install -y gdebi-core 2021-10-01T23:02:34.1342483Z Reading package lists... 2021-10-01T23:02:34.3384838Z Building dependency tree... 2021-10-01T23:02:34.3405111Z Reading state information... 2021-10-01T23:02:35.1779935Z gdebi-core is already the newest version (0.9.5.7+nmu3). 2021-10-01T23:02:35.1781140Z 0 upgraded, 0 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:02:35.1830861Z [command]sudo gdebi --non-interactive /home/runner/work/_temp/pandoc-2.7.3-1-amd64.deb 2021-10-01T23:02:35.1831539Z 2021-10-01T23:02:35.1832057Z Reading package lists... 0% 2021-10-01T23:02:35.1832417Z 2021-10-01T23:02:35.1832921Z Reading package lists... 100% 2021-10-01T23:02:35.1833261Z 2021-10-01T23:02:35.1833508Z 2021-10-01T23:02:35.1834017Z Reading package lists... Done 2021-10-01T23:02:35.1834384Z 2021-10-01T23:02:35.1834919Z Building dependency tree... 0% 2021-10-01T23:02:35.1835297Z 2021-10-01T23:02:35.1835821Z Building dependency tree... 0% 2021-10-01T23:02:35.1836198Z 2021-10-01T23:02:35.1836705Z Building dependency tree... 50% 2021-10-01T23:02:35.1837080Z 2021-10-01T23:02:35.1837621Z Building dependency tree... 50% 2021-10-01T23:02:35.1837996Z 2021-10-01T23:02:35.1838499Z Building dependency tree 2021-10-01T23:02:35.1838869Z 2021-10-01T23:02:35.1839399Z Reading state information... 0% 2021-10-01T23:02:35.1839785Z 2021-10-01T23:02:35.1988408Z Reading state information... 0% 2021-10-01T23:02:35.1988851Z 2021-10-01T23:02:35.1989104Z 2021-10-01T23:02:35.1989668Z Reading state information... Done 2021-10-01T23:02:35.1990075Z 2021-10-01T23:02:35.1990600Z Reading state information... 0% 2021-10-01T23:02:35.2035386Z 2021-10-01T23:02:35.2036000Z Reading state information... 1% 2021-10-01T23:02:35.2078837Z 2021-10-01T23:02:35.2079451Z Reading state information... 3% 2021-10-01T23:02:35.2138726Z 2021-10-01T23:02:35.2139497Z Reading state information... 5% 2021-10-01T23:02:35.2178944Z 2021-10-01T23:02:35.2179527Z Reading state information... 7% 2021-10-01T23:02:35.2222694Z 2021-10-01T23:02:35.2223307Z Reading state information... 9% 2021-10-01T23:02:35.2268405Z 2021-10-01T23:02:35.2269043Z Reading state information... 11% 2021-10-01T23:02:35.2315153Z 2021-10-01T23:02:35.2315749Z Reading state information... 13% 2021-10-01T23:02:35.2359639Z 2021-10-01T23:02:35.2360684Z Reading state information... 15% 2021-10-01T23:02:35.2407181Z 2021-10-01T23:02:35.2407994Z Reading state information... 17% 2021-10-01T23:02:35.2453456Z 2021-10-01T23:02:35.2454051Z Reading state information... 19% 2021-10-01T23:02:35.2498332Z 2021-10-01T23:02:35.2498958Z Reading state information... 21% 2021-10-01T23:02:35.2542093Z 2021-10-01T23:02:35.2542694Z Reading state information... 23% 2021-10-01T23:02:35.2593197Z 2021-10-01T23:02:35.2593784Z Reading state information... 25% 2021-10-01T23:02:35.2643395Z 2021-10-01T23:02:35.2644001Z Reading state information... 27% 2021-10-01T23:02:35.2690922Z 2021-10-01T23:02:35.2691527Z Reading state information... 29% 2021-10-01T23:02:35.2741555Z 2021-10-01T23:02:35.2742140Z Reading state information... 31% 2021-10-01T23:02:35.2785424Z 2021-10-01T23:02:35.2786363Z Reading state information... 33% 2021-10-01T23:02:35.2827959Z 2021-10-01T23:02:35.2828570Z Reading state information... 35% 2021-10-01T23:02:35.2875766Z 2021-10-01T23:02:35.2876368Z Reading state information... 37% 2021-10-01T23:02:35.2925367Z 2021-10-01T23:02:35.2926318Z Reading state information... 39% 2021-10-01T23:02:35.2977056Z 2021-10-01T23:02:35.2977679Z Reading state information... 41% 2021-10-01T23:02:35.3022491Z 2021-10-01T23:02:35.3023090Z Reading state information... 43% 2021-10-01T23:02:35.3123304Z 2021-10-01T23:02:35.3123925Z Reading state information... 45% 2021-10-01T23:02:35.3168861Z 2021-10-01T23:02:35.3169466Z Reading state information... 47% 2021-10-01T23:02:35.3219394Z 2021-10-01T23:02:35.3220009Z Reading state information... 49% 2021-10-01T23:02:35.3264001Z 2021-10-01T23:02:35.3264601Z Reading state information... 51% 2021-10-01T23:02:35.3309944Z 2021-10-01T23:02:35.3310553Z Reading state information... 53% 2021-10-01T23:02:35.3358253Z 2021-10-01T23:02:35.3358905Z Reading state information... 55% 2021-10-01T23:02:35.3407402Z 2021-10-01T23:02:35.3407991Z Reading state information... 57% 2021-10-01T23:02:35.3463135Z 2021-10-01T23:02:35.3463731Z Reading state information... 59% 2021-10-01T23:02:35.3506886Z 2021-10-01T23:02:35.3507506Z Reading state information... 61% 2021-10-01T23:02:35.3551356Z 2021-10-01T23:02:35.3551950Z Reading state information... 63% 2021-10-01T23:02:35.3595441Z 2021-10-01T23:02:35.3596050Z Reading state information... 65% 2021-10-01T23:02:35.3640093Z 2021-10-01T23:02:35.3640810Z Reading state information... 67% 2021-10-01T23:02:35.3688564Z 2021-10-01T23:02:35.3689263Z Reading state information... 69% 2021-10-01T23:02:35.3746335Z 2021-10-01T23:02:35.3746929Z Reading state information... 71% 2021-10-01T23:02:35.3792179Z 2021-10-01T23:02:35.3792786Z Reading state information... 73% 2021-10-01T23:02:35.3833980Z 2021-10-01T23:02:35.3834595Z Reading state information... 75% 2021-10-01T23:02:35.3882286Z 2021-10-01T23:02:35.3882900Z Reading state information... 77% 2021-10-01T23:02:35.3943748Z 2021-10-01T23:02:35.3944357Z Reading state information... 79% 2021-10-01T23:02:35.3987940Z 2021-10-01T23:02:35.3988558Z Reading state information... 81% 2021-10-01T23:02:35.4036424Z 2021-10-01T23:02:35.4037038Z Reading state information... 83% 2021-10-01T23:02:35.4084247Z 2021-10-01T23:02:35.4084851Z Reading state information... 85% 2021-10-01T23:02:35.4133877Z 2021-10-01T23:02:35.4134482Z Reading state information... 87% 2021-10-01T23:02:35.4177607Z 2021-10-01T23:02:35.4178384Z Reading state information... 89% 2021-10-01T23:02:35.4220826Z 2021-10-01T23:02:35.4221435Z Reading state information... 91% 2021-10-01T23:02:35.4265192Z 2021-10-01T23:02:35.4265797Z Reading state information... 93% 2021-10-01T23:02:35.4311028Z 2021-10-01T23:02:35.4311620Z Reading state information... 95% 2021-10-01T23:02:35.4359469Z 2021-10-01T23:02:35.4360059Z Reading state information... 97% 2021-10-01T23:02:35.4405033Z 2021-10-01T23:02:35.4405660Z Reading state information... 99% 2021-10-01T23:02:35.7614952Z Selecting previously unselected package pandoc. 2021-10-01T23:02:35.9033980Z (Reading database ... 265106 files and directories currently installed.) 2021-10-01T23:02:35.9158697Z Preparing to unpack .../_temp/pandoc-2.7.3-1-amd64.deb ... 2021-10-01T23:02:35.9178496Z Unpacking pandoc (2.7.3-1) ... 2021-10-01T23:02:38.2541295Z Setting up pandoc (2.7.3-1) ... 2021-10-01T23:02:38.2578935Z Processing triggers for man-db (2.9.1-1) ... 2021-10-01T23:02:42.3379338Z 2021-10-01T23:02:42.3380460Z 2021-10-01T23:02:42.3381288Z Reading state information... Done 2021-10-01T23:02:42.3747579Z ##[group]Run git config user.name adigherman 2021-10-01T23:02:42.3748331Z git config user.name adigherman 2021-10-01T23:02:42.3748988Z git config user.email adig@jhu.edu 2021-10-01T23:02:42.3797485Z shell: /usr/bin/bash -e {0} 2021-10-01T23:02:42.3797950Z env: 2021-10-01T23:02:42.3798468Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:02:42.3799029Z TIC_DEPLOY_KEY: 2021-10-01T23:02:42.3799960Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:02:42.3801831Z GITHUB_PAT: *** 2021-10-01T23:02:42.3803107Z COVERALLS_TOKEN: *** 2021-10-01T23:02:42.3803692Z continue-on-error: false 2021-10-01T23:02:42.3804407Z VDIFFR_RUN_TESTS: 2021-10-01T23:02:42.3804972Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:02:42.3805489Z TZ: UTC 2021-10-01T23:02:42.3805931Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:02:42.3806418Z NOT_CRAN: true 2021-10-01T23:02:42.3806849Z ##[endgroup] 2021-10-01T23:02:42.4044391Z ##[group]Run adigherman/actions/install-sysdeps-linux@master 2021-10-01T23:02:42.4045108Z env: 2021-10-01T23:02:42.4045647Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:02:42.4046163Z TIC_DEPLOY_KEY: 2021-10-01T23:02:42.4047071Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:02:42.4049021Z GITHUB_PAT: *** 2021-10-01T23:02:42.4049924Z COVERALLS_TOKEN: *** 2021-10-01T23:02:42.4050469Z continue-on-error: false 2021-10-01T23:02:42.4051009Z VDIFFR_RUN_TESTS: 2021-10-01T23:02:42.4051544Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:02:42.4052102Z TZ: UTC 2021-10-01T23:02:42.4052545Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:02:42.4053011Z NOT_CRAN: true 2021-10-01T23:02:42.4053456Z ##[endgroup] 2021-10-01T23:02:42.4148451Z ##[group]Run /home/runner/work/_actions/adigherman/actions/master/install-sysdeps-linux/linux.sh 2021-10-01T23:02:42.4149808Z /home/runner/work/_actions/adigherman/actions/master/install-sysdeps-linux/linux.sh 2021-10-01T23:02:42.4197965Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-10-01T23:02:42.4198537Z env: 2021-10-01T23:02:42.4199047Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:02:42.4199569Z TIC_DEPLOY_KEY: 2021-10-01T23:02:42.4200475Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:02:42.4201974Z GITHUB_PAT: *** 2021-10-01T23:02:42.4202879Z COVERALLS_TOKEN: *** 2021-10-01T23:02:42.4203422Z continue-on-error: false 2021-10-01T23:02:42.4203963Z VDIFFR_RUN_TESTS: 2021-10-01T23:02:42.4204517Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:02:42.4205009Z TZ: UTC 2021-10-01T23:02:42.4205462Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:02:42.4205915Z NOT_CRAN: true 2021-10-01T23:02:42.4206346Z ##[endgroup] 2021-10-01T23:02:42.6261279Z Reading package lists... 2021-10-01T23:02:42.8137012Z Building dependency tree... 2021-10-01T23:02:42.8158601Z Reading state information... 2021-10-01T23:02:42.9719532Z The following additional packages will be installed: 2021-10-01T23:02:42.9723999Z cmake-data libjsoncpp1 librhash0 2021-10-01T23:02:42.9729575Z Suggested packages: 2021-10-01T23:02:42.9731131Z cmake-doc ninja-build 2021-10-01T23:02:43.0285808Z The following NEW packages will be installed: 2021-10-01T23:02:43.0293892Z cmake cmake-data libjsoncpp1 librhash0 2021-10-01T23:02:43.0681333Z 0 upgraded, 4 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:02:43.1266996Z Need to get 5470 kB of archives. 2021-10-01T23:02:43.1268200Z After this operation, 28.3 MB of additional disk space will be used. 2021-10-01T23:02:43.1270321Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake-data all 3.16.3-1ubuntu1 [1612 kB] 2021-10-01T23:02:43.1741478Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjsoncpp1 amd64 1.7.4-3.1ubuntu2 [75.6 kB] 2021-10-01T23:02:43.1753924Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librhash0 amd64 1.3.9-1 [113 kB] 2021-10-01T23:02:43.1765855Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake amd64 3.16.3-1ubuntu1 [3669 kB] 2021-10-01T23:02:43.7128581Z Fetched 5470 kB in 0s (47.8 MB/s) 2021-10-01T23:02:43.7602565Z Selecting previously unselected package cmake-data. 2021-10-01T23:02:43.7689695Z (Reading database ... 2021-10-01T23:02:43.7690699Z (Reading database ... 5% 2021-10-01T23:02:43.7691507Z (Reading database ... 10% 2021-10-01T23:02:43.7692275Z (Reading database ... 15% 2021-10-01T23:02:43.7693025Z (Reading database ... 20% 2021-10-01T23:02:43.7693791Z (Reading database ... 25% 2021-10-01T23:02:43.7694546Z (Reading database ... 30% 2021-10-01T23:02:43.7695800Z (Reading database ... 35% 2021-10-01T23:02:43.7696912Z (Reading database ... 40% 2021-10-01T23:02:43.7697689Z (Reading database ... 45% 2021-10-01T23:02:43.7699124Z (Reading database ... 50% 2021-10-01T23:02:43.7742292Z (Reading database ... 55% 2021-10-01T23:02:43.7781473Z (Reading database ... 60% 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Selecting previously unselected package librhash0:amd64. 2021-10-01T23:02:45.1820957Z Preparing to unpack .../librhash0_1.3.9-1_amd64.deb ... 2021-10-01T23:02:45.1822660Z Unpacking librhash0:amd64 (1.3.9-1) ... 2021-10-01T23:02:45.1824209Z Selecting previously unselected package cmake. 2021-10-01T23:02:45.1826151Z Preparing to unpack .../cmake_3.16.3-1ubuntu1_amd64.deb ... 2021-10-01T23:02:45.1827806Z Unpacking cmake (3.16.3-1ubuntu1) ... 2021-10-01T23:02:45.1832391Z Setting up librhash0:amd64 (1.3.9-1) ... 2021-10-01T23:02:45.1833693Z Setting up cmake-data (3.16.3-1ubuntu1) ... 2021-10-01T23:02:45.1835096Z Setting up libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-10-01T23:02:45.1836395Z Setting up cmake (3.16.3-1ubuntu1) ... 2021-10-01T23:02:45.1837700Z Processing triggers for man-db (2.9.1-1) ... 2021-10-01T23:02:50.3125773Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:02:52.3204037Z Reading package lists... 2021-10-01T23:02:52.5130949Z Building dependency tree... 2021-10-01T23:02:52.5153142Z Reading state information... 2021-10-01T23:02:52.6928926Z Suggested packages: 2021-10-01T23:02:52.6930598Z libssh-doc 2021-10-01T23:02:52.7490757Z The following NEW packages will be installed: 2021-10-01T23:02:52.7493826Z libssh-dev 2021-10-01T23:02:52.7873352Z 0 upgraded, 1 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:02:52.8413536Z Need to get 219 kB of archives. 2021-10-01T23:02:52.8414770Z After this operation, 1128 kB of additional disk space will be used. 2021-10-01T23:02:52.8416937Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-dev amd64 0.9.3-2ubuntu2.2 [219 kB] 2021-10-01T23:02:53.3339153Z Fetched 219 kB in 0s (6678 kB/s) 2021-10-01T23:02:53.3675057Z Selecting previously unselected package libssh-dev:amd64. 2021-10-01T23:02:53.3755603Z (Reading database ... 2021-10-01T23:02:53.3756900Z (Reading database ... 5% 2021-10-01T23:02:53.3757976Z (Reading database ... 10% 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2021-10-01T23:02:53.5099828Z (Reading database ... 267897 files and directories currently installed.) 2021-10-01T23:02:53.5223971Z Preparing to unpack .../libssh-dev_0.9.3-2ubuntu2.2_amd64.deb ... 2021-10-01T23:02:53.5236499Z Unpacking libssh-dev:amd64 (0.9.3-2ubuntu2.2) ... 2021-10-01T23:02:53.6130726Z Setting up libssh-dev:amd64 (0.9.3-2ubuntu2.2) ... 2021-10-01T23:02:55.5905805Z Reading package lists... 2021-10-01T23:02:55.7917700Z Building dependency tree... 2021-10-01T23:02:55.7937676Z Reading state information... 2021-10-01T23:02:56.0347310Z The following NEW packages will be installed: 2021-10-01T23:02:56.0355128Z jags 2021-10-01T23:02:56.0735543Z 0 upgraded, 1 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:02:56.1325864Z Need to get 1562 kB of archives. 2021-10-01T23:02:56.1326769Z After this operation, 3615 kB of additional disk space will be used. 2021-10-01T23:02:56.1328896Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 jags amd64 4.3.0-3build1 [1562 kB] 2021-10-01T23:02:56.6576972Z Fetched 1562 kB in 0s (20.4 MB/s) 2021-10-01T23:02:56.6957030Z Selecting previously unselected package jags. 2021-10-01T23:02:56.7041746Z (Reading database ... 2021-10-01T23:02:56.7042384Z (Reading database ... 5% 2021-10-01T23:02:56.7044594Z (Reading database ... 10% 2021-10-01T23:02:56.7045186Z (Reading database ... 15% 2021-10-01T23:02:56.7047309Z (Reading database ... 20% 2021-10-01T23:02:56.7047915Z (Reading database ... 25% 2021-10-01T23:02:56.7050051Z (Reading database ... 30% 2021-10-01T23:02:56.7050612Z (Reading database ... 35% 2021-10-01T23:02:56.7052702Z (Reading database ... 40% 2021-10-01T23:02:56.7053283Z (Reading database ... 45% 2021-10-01T23:02:56.7055314Z (Reading database ... 50% 2021-10-01T23:02:56.7108321Z (Reading database ... 55% 2021-10-01T23:02:56.7151569Z (Reading database ... 60% 2021-10-01T23:02:56.7199236Z (Reading database ... 65% 2021-10-01T23:02:56.7230427Z (Reading database ... 70% 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2021-10-01T23:03:03.7419235Z The following additional packages will be installed: 2021-10-01T23:03:03.7421811Z libnode64 libuv1-dev 2021-10-01T23:03:03.8076647Z The following NEW packages will be installed: 2021-10-01T23:03:03.8083756Z libnode-dev libnode64 libuv1-dev 2021-10-01T23:03:03.8473686Z 0 upgraded, 3 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:03:03.8990124Z Need to get 6239 kB of archives. 2021-10-01T23:03:03.8991077Z After this operation, 24.9 MB of additional disk space will be used. 2021-10-01T23:03:03.8993285Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libuv1-dev amd64 1.34.2-1ubuntu1.3 [103 kB] 2021-10-01T23:03:03.9163584Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode64 amd64 10.19.0~dfsg-3ubuntu1 [5765 kB] 2021-10-01T23:03:03.9881115Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode-dev amd64 10.19.0~dfsg-3ubuntu1 [370 kB] 2021-10-01T23:03:04.4785501Z Fetched 6239 kB in 0s (55.2 MB/s) 2021-10-01T23:03:04.5132885Z Selecting previously unselected package libuv1-dev:amd64. 2021-10-01T23:03:04.5214443Z (Reading database ... 2021-10-01T23:03:04.5215105Z (Reading database ... 5% 2021-10-01T23:03:04.5215658Z (Reading database ... 10% 2021-10-01T23:03:04.5216460Z (Reading database ... 15% 2021-10-01T23:03:04.5217646Z (Reading database ... 20% 2021-10-01T23:03:04.5218417Z (Reading database ... 25% 2021-10-01T23:03:04.5218972Z (Reading database ... 30% 2021-10-01T23:03:04.5219507Z (Reading database ... 35% 2021-10-01T23:03:04.5220096Z (Reading database ... 40% 2021-10-01T23:03:04.5220646Z (Reading database ... 45% 2021-10-01T23:03:04.5221186Z (Reading database ... 50% 2021-10-01T23:03:04.5270012Z (Reading database ... 55% 2021-10-01T23:03:04.5307342Z (Reading database ... 60% 2021-10-01T23:03:04.5349551Z (Reading database ... 65% 2021-10-01T23:03:04.5379742Z (Reading database ... 70% 2021-10-01T23:03:04.5432895Z (Reading database ... 75% 2021-10-01T23:03:04.5694984Z (Reading database ... 80% 2021-10-01T23:03:04.6357390Z (Reading database ... 85% 2021-10-01T23:03:04.6530846Z (Reading database ... 90% 2021-10-01T23:03:04.6603556Z (Reading database ... 95% 2021-10-01T23:03:04.6604607Z (Reading database ... 100% 2021-10-01T23:03:04.6606153Z (Reading database ... 268056 files and directories currently installed.) 2021-10-01T23:03:04.6737318Z Preparing to unpack .../libuv1-dev_1.34.2-1ubuntu1.3_amd64.deb ... 2021-10-01T23:03:04.6753412Z Unpacking libuv1-dev:amd64 (1.34.2-1ubuntu1.3) ... 2021-10-01T23:03:04.7179398Z Selecting previously unselected package libnode64:amd64. 2021-10-01T23:03:04.7484924Z Preparing to unpack .../libnode64_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-10-01T23:03:04.7507850Z Unpacking libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-10-01T23:03:06.1854684Z Selecting previously unselected package libnode-dev:amd64. 2021-10-01T23:03:06.1856840Z Preparing to unpack .../libnode-dev_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-10-01T23:03:06.1858523Z Unpacking libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-10-01T23:03:06.1859909Z Setting up libuv1-dev:amd64 (1.34.2-1ubuntu1.3) ... 2021-10-01T23:03:06.1861210Z Setting up libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-10-01T23:03:06.1862595Z Setting up libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-10-01T23:03:06.1863966Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:03:07.6633267Z Reading package lists... 2021-10-01T23:03:07.8557896Z Building dependency tree... 2021-10-01T23:03:07.8578505Z Reading state information... 2021-10-01T23:03:08.0314620Z The following additional packages will be installed: 2021-10-01T23:03:08.0317478Z libfftw3-bin libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-10-01T23:03:08.0321235Z Suggested packages: 2021-10-01T23:03:08.0322532Z libfftw3-doc 2021-10-01T23:03:08.1018270Z The following NEW packages will be installed: 2021-10-01T23:03:08.1026101Z libfftw3-bin libfftw3-dev libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-10-01T23:03:08.1425011Z 0 upgraded, 5 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:03:08.1998135Z Need to get 3986 kB of archives. 2021-10-01T23:03:08.1999632Z After this operation, 22.4 MB of additional disk space will be used. 2021-10-01T23:03:08.2002160Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-long3 amd64 3.3.8-2ubuntu1 [313 kB] 2021-10-01T23:03:08.2175577Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-quad3 amd64 3.3.8-2ubuntu1 [673 kB] 2021-10-01T23:03:08.2350745Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-single3 amd64 3.3.8-2ubuntu1 [756 kB] 2021-10-01T23:03:08.2489154Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-bin amd64 3.3.8-2ubuntu1 [32.2 kB] 2021-10-01T23:03:08.2494831Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-dev amd64 3.3.8-2ubuntu1 [2211 kB] 2021-10-01T23:03:08.7534552Z Fetched 3986 kB in 0s (39.7 MB/s) 2021-10-01T23:03:08.7900504Z Selecting previously unselected package libfftw3-long3:amd64. 2021-10-01T23:03:08.7981853Z (Reading database ... 2021-10-01T23:03:08.7982561Z (Reading database ... 5% 2021-10-01T23:03:08.7983127Z (Reading database ... 10% 2021-10-01T23:03:08.7983675Z (Reading database ... 15% 2021-10-01T23:03:08.7984232Z (Reading database ... 20% 2021-10-01T23:03:08.7984985Z (Reading database ... 25% 2021-10-01T23:03:08.7985529Z (Reading database ... 30% 2021-10-01T23:03:08.7986080Z (Reading database ... 35% 2021-10-01T23:03:08.7986631Z (Reading database ... 40% 2021-10-01T23:03:08.7987163Z (Reading database ... 45% 2021-10-01T23:03:08.7987707Z (Reading database ... 50% 2021-10-01T23:03:08.8031733Z (Reading database ... 55% 2021-10-01T23:03:08.8065977Z (Reading database ... 60% 2021-10-01T23:03:08.8107231Z (Reading database ... 65% 2021-10-01T23:03:08.8136068Z (Reading database ... 70% 2021-10-01T23:03:08.8191026Z (Reading database ... 75% 2021-10-01T23:03:08.8448615Z (Reading database ... 80% 2021-10-01T23:03:08.9089911Z (Reading database ... 85% 2021-10-01T23:03:08.9260387Z (Reading database ... 90% 2021-10-01T23:03:08.9330079Z (Reading database ... 95% 2021-10-01T23:03:08.9330736Z (Reading database ... 100% 2021-10-01T23:03:08.9331578Z (Reading database ... 268192 files and directories currently installed.) 2021-10-01T23:03:08.9454676Z Preparing to unpack .../libfftw3-long3_3.3.8-2ubuntu1_amd64.deb ... 2021-10-01T23:03:08.9533994Z Unpacking libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-10-01T23:03:09.0181633Z Selecting previously unselected package libfftw3-quad3:amd64. 2021-10-01T23:03:09.0451549Z Preparing to unpack .../libfftw3-quad3_3.3.8-2ubuntu1_amd64.deb ... 2021-10-01T23:03:09.0464528Z Unpacking libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-10-01T23:03:09.1582206Z Selecting previously unselected package libfftw3-single3:amd64. 2021-10-01T23:03:09.1842016Z Preparing to unpack .../libfftw3-single3_3.3.8-2ubuntu1_amd64.deb ... 2021-10-01T23:03:09.1865802Z Unpacking libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-10-01T23:03:09.2941320Z Selecting previously unselected package libfftw3-bin. 2021-10-01T23:03:09.3184433Z Preparing to unpack .../libfftw3-bin_3.3.8-2ubuntu1_amd64.deb ... 2021-10-01T23:03:09.3202045Z Unpacking libfftw3-bin (3.3.8-2ubuntu1) ... 2021-10-01T23:03:09.3521657Z Selecting previously unselected package libfftw3-dev:amd64. 2021-10-01T23:03:09.3822321Z Preparing to unpack .../libfftw3-dev_3.3.8-2ubuntu1_amd64.deb ... 2021-10-01T23:03:09.3836267Z Unpacking libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-10-01T23:03:09.7080343Z Setting up libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-10-01T23:03:09.7119177Z Setting up libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-10-01T23:03:09.7149010Z Setting up libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-10-01T23:03:09.7178889Z Setting up libfftw3-bin (3.3.8-2ubuntu1) ... 2021-10-01T23:03:09.7215205Z Setting up libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-10-01T23:03:09.7251036Z Processing triggers for man-db (2.9.1-1) ... 2021-10-01T23:03:13.9062468Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:03:15.8827209Z Reading package lists... 2021-10-01T23:03:16.0725310Z Building dependency tree... 2021-10-01T23:03:16.0745688Z Reading state information... 2021-10-01T23:03:16.2554116Z The following additional packages will be installed: 2021-10-01T23:03:16.2556846Z libdcmtk14 2021-10-01T23:03:16.3153956Z The following NEW packages will be installed: 2021-10-01T23:03:16.3161084Z dcmtk libdcmtk14 2021-10-01T23:03:16.3546654Z 0 upgraded, 2 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:03:16.4088319Z Need to get 5546 kB of archives. 2021-10-01T23:03:16.4089291Z After this operation, 26.5 MB of additional disk space will be used. 2021-10-01T23:03:16.4092035Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdcmtk14 amd64 3.6.4-2.1build2 [4682 kB] 2021-10-01T23:03:16.4952090Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 dcmtk amd64 3.6.4-2.1build2 [864 kB] 2021-10-01T23:03:16.9791859Z Fetched 5546 kB in 0s (47.4 MB/s) 2021-10-01T23:03:17.0152811Z Selecting previously unselected package libdcmtk14. 2021-10-01T23:03:17.0234341Z (Reading database ... 2021-10-01T23:03:17.0234933Z (Reading database ... 5% 2021-10-01T23:03:17.0235658Z (Reading database ... 10% 2021-10-01T23:03:17.0236759Z (Reading database ... 15% 2021-10-01T23:03:17.0237549Z (Reading database ... 20% 2021-10-01T23:03:17.0238249Z (Reading database ... 25% 2021-10-01T23:03:17.0238910Z (Reading database ... 30% 2021-10-01T23:03:17.0239559Z (Reading database ... 35% 2021-10-01T23:03:17.0240189Z (Reading database ... 40% 2021-10-01T23:03:17.0240839Z (Reading database ... 45% 2021-10-01T23:03:17.0241489Z (Reading database ... 50% 2021-10-01T23:03:17.0287229Z (Reading database ... 55% 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2021-10-01T23:03:17.9414579Z Setting up libdcmtk14 (3.6.4-2.1build2) ... 2021-10-01T23:03:17.9460825Z Setting up dcmtk (3.6.4-2.1build2) ... 2021-10-01T23:03:17.9609100Z Adding `dcmtk' group to system ... 2021-10-01T23:03:18.1205586Z Adding `dcmtk' user to system ... 2021-10-01T23:03:18.3316263Z adduser: Warning: The home directory `/var/lib/dcmtk/db' does not belong to the user you are currently creating. 2021-10-01T23:03:18.6506977Z Processing triggers for man-db (2.9.1-1) ... 2021-10-01T23:03:24.0683742Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:03:26.0749102Z Reading package lists... 2021-10-01T23:03:26.2776442Z Building dependency tree... 2021-10-01T23:03:26.2797037Z Reading state information... 2021-10-01T23:03:26.4609183Z libsecret-1-dev is already the newest version (0.20.4-0ubuntu1). 2021-10-01T23:03:26.5531989Z 0 upgraded, 0 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:03:26.7022826Z Reading package lists... 2021-10-01T23:03:26.8922524Z Building dependency tree... 2021-10-01T23:03:26.8943105Z Reading state information... 2021-10-01T23:03:27.0909381Z libpng-dev is already the newest version (1.6.37-2). 2021-10-01T23:03:27.0910444Z libpng-dev set to manually installed. 2021-10-01T23:03:27.1818951Z 0 upgraded, 0 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:03:27.3403303Z Reading package lists... 2021-10-01T23:03:27.5376140Z Building dependency tree... 2021-10-01T23:03:27.5396232Z Reading state information... 2021-10-01T23:03:27.7190424Z The following additional packages will be installed: 2021-10-01T23:03:27.7193756Z libopenjp2-7 libpoppler-cpp0v5 libpoppler-dev libpoppler97 poppler-data 2021-10-01T23:03:27.7201245Z Suggested packages: 2021-10-01T23:03:27.7202871Z poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho 2021-10-01T23:03:27.7204415Z fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai 2021-10-01T23:03:27.7205583Z fonts-arphic-uming fonts-nanum 2021-10-01T23:03:27.7805940Z The following NEW packages will be installed: 2021-10-01T23:03:27.7807832Z libopenjp2-7 libpoppler-cpp-dev libpoppler-cpp0v5 libpoppler-dev 2021-10-01T23:03:27.7816981Z libpoppler97 poppler-data 2021-10-01T23:03:27.8231024Z 0 upgraded, 6 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:03:27.8835862Z Need to get 2582 kB of archives. 2021-10-01T23:03:27.8837206Z After this operation, 16.7 MB of additional disk space will be used. 2021-10-01T23:03:27.8839403Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 poppler-data all 0.4.9-2 [1475 kB] 2021-10-01T23:03:27.9288127Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopenjp2-7 amd64 2.3.1-1ubuntu4.20.04.1 [141 kB] 2021-10-01T23:03:27.9325863Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler97 amd64 0.86.1-0ubuntu1 [915 kB] 2021-10-01T23:03:27.9437942Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp0v5 amd64 0.86.1-0ubuntu1 [35.6 kB] 2021-10-01T23:03:27.9444641Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-dev amd64 0.86.1-0ubuntu1 [5336 B] 2021-10-01T23:03:27.9449609Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp-dev amd64 0.86.1-0ubuntu1 [10.4 kB] 2021-10-01T23:03:28.4265795Z Fetched 2582 kB in 0s (29.6 MB/s) 2021-10-01T23:03:28.4679693Z Selecting previously unselected package poppler-data. 2021-10-01T23:03:28.4765069Z (Reading database ... 2021-10-01T23:03:28.4765871Z (Reading database ... 5% 2021-10-01T23:03:28.4766629Z (Reading database ... 10% 2021-10-01T23:03:28.4767231Z (Reading database ... 15% 2021-10-01T23:03:28.4767896Z (Reading database ... 20% 2021-10-01T23:03:28.4768472Z (Reading database ... 25% 2021-10-01T23:03:28.4769125Z (Reading database ... 30% 2021-10-01T23:03:28.4769776Z (Reading database ... 35% 2021-10-01T23:03:28.4771140Z (Reading database ... 40% 2021-10-01T23:03:28.4771795Z (Reading database ... 45% 2021-10-01T23:03:28.4772600Z (Reading database ... 50% 2021-10-01T23:03:28.4819954Z (Reading database ... 55% 2021-10-01T23:03:28.4854142Z (Reading database ... 60% 2021-10-01T23:03:28.4896859Z (Reading database ... 65% 2021-10-01T23:03:28.4931520Z (Reading database ... 70% 2021-10-01T23:03:28.4986589Z (Reading database ... 75% 2021-10-01T23:03:28.5239084Z (Reading database ... 80% 2021-10-01T23:03:28.5894763Z (Reading database ... 85% 2021-10-01T23:03:28.6073578Z (Reading database ... 90% 2021-10-01T23:03:28.6145961Z (Reading database ... 95% 2021-10-01T23:03:28.6146730Z (Reading database ... 100% 2021-10-01T23:03:28.6147626Z (Reading database ... 268518 files and directories currently installed.) 2021-10-01T23:03:28.6279669Z Preparing to unpack .../0-poppler-data_0.4.9-2_all.deb ... 2021-10-01T23:03:28.6296456Z Unpacking poppler-data (0.4.9-2) ... 2021-10-01T23:03:28.9102717Z Selecting previously unselected package libopenjp2-7:amd64. 2021-10-01T23:03:28.9473068Z Preparing to unpack .../1-libopenjp2-7_2.3.1-1ubuntu4.20.04.1_amd64.deb ... 2021-10-01T23:03:28.9496866Z Unpacking libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-10-01T23:03:28.9941070Z Selecting previously unselected package libpoppler97:amd64. 2021-10-01T23:03:29.0225352Z Preparing to unpack .../2-libpoppler97_0.86.1-0ubuntu1_amd64.deb ... 2021-10-01T23:03:29.0236718Z Unpacking libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-10-01T23:03:29.1620957Z Selecting previously unselected package libpoppler-cpp0v5:amd64. 2021-10-01T23:03:29.1919244Z Preparing to unpack .../3-libpoppler-cpp0v5_0.86.1-0ubuntu1_amd64.deb ... 2021-10-01T23:03:29.1932852Z Unpacking libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-10-01T23:03:29.2381240Z Selecting previously unselected package libpoppler-dev:amd64. 2021-10-01T23:03:29.2656561Z Preparing to unpack .../4-libpoppler-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-10-01T23:03:29.2668350Z Unpacking libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-10-01T23:03:29.2939949Z Selecting previously unselected package libpoppler-cpp-dev:amd64. 2021-10-01T23:03:29.3230316Z Preparing to unpack .../5-libpoppler-cpp-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-10-01T23:03:29.3242790Z Unpacking libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-10-01T23:03:29.3964707Z Setting up poppler-data (0.4.9-2) ... 2021-10-01T23:03:29.4072391Z Setting up libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-10-01T23:03:29.4099071Z Setting up libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-10-01T23:03:29.4128149Z Setting up libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-10-01T23:03:29.4157369Z Setting up libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-10-01T23:03:29.4191098Z Setting up libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-10-01T23:03:29.4232816Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-10-01T23:03:29.5536305Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:03:31.5671102Z Reading package lists... 2021-10-01T23:03:31.7605526Z Building dependency tree... 2021-10-01T23:03:31.7625191Z Reading state information... 2021-10-01T23:03:31.9385481Z The following additional packages will be installed: 2021-10-01T23:03:31.9389542Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libsz2 2021-10-01T23:03:31.9396400Z Suggested packages: 2021-10-01T23:03:31.9397266Z libhdf5-doc 2021-10-01T23:03:31.9982837Z The following NEW packages will be installed: 2021-10-01T23:03:31.9991713Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libhdf5-dev 2021-10-01T23:03:31.9992886Z libsz2 2021-10-01T23:03:32.0366675Z 0 upgraded, 7 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:03:32.0916592Z Need to get 4074 kB of archives. 2021-10-01T23:03:32.0917628Z After this operation, 17.6 MB of additional disk space will be used. 2021-10-01T23:03:32.0919823Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 hdf5-helpers amd64 1.10.4+repack-11ubuntu1 [13.6 kB] 2021-10-01T23:03:32.0957042Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec0 amd64 1.0.4-1 [19.1 kB] 2021-10-01T23:03:32.0963952Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsz2 amd64 1.0.4-1 [5188 B] 2021-10-01T23:03:32.0970364Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-103 amd64 1.10.4+repack-11ubuntu1 [1311 kB] 2021-10-01T23:03:32.1296889Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-cpp-103 amd64 1.10.4+repack-11ubuntu1 [120 kB] 2021-10-01T23:03:32.1314524Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec-dev amd64 1.0.4-1 [16.9 kB] 2021-10-01T23:03:32.1320523Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-dev amd64 1.10.4+repack-11ubuntu1 [2589 kB] 2021-10-01T23:03:32.6449601Z Fetched 4074 kB in 0s (41.8 MB/s) 2021-10-01T23:03:32.6786555Z Selecting previously unselected package hdf5-helpers. 2021-10-01T23:03:32.6871052Z (Reading database ... 2021-10-01T23:03:32.6871706Z (Reading database ... 5% 2021-10-01T23:03:32.6872252Z (Reading database ... 10% 2021-10-01T23:03:32.6872814Z (Reading database ... 15% 2021-10-01T23:03:32.6873352Z (Reading database ... 20% 2021-10-01T23:03:32.6873902Z (Reading database ... 25% 2021-10-01T23:03:32.6874456Z (Reading database ... 30% 2021-10-01T23:03:32.6874991Z (Reading database ... 35% 2021-10-01T23:03:32.6875539Z (Reading database ... 40% 2021-10-01T23:03:32.6876090Z (Reading database ... 45% 2021-10-01T23:03:32.6878616Z (Reading database ... 50% 2021-10-01T23:03:32.6909950Z (Reading database ... 55% 2021-10-01T23:03:32.6943197Z (Reading database ... 60% 2021-10-01T23:03:32.6985974Z (Reading database ... 65% 2021-10-01T23:03:32.7014323Z (Reading database ... 70% 2021-10-01T23:03:32.7065397Z (Reading database ... 75% 2021-10-01T23:03:32.7318505Z (Reading database ... 80% 2021-10-01T23:03:32.7956366Z (Reading database ... 85% 2021-10-01T23:03:32.8125776Z (Reading database ... 90% 2021-10-01T23:03:32.8196323Z (Reading database ... 95% 2021-10-01T23:03:32.8198333Z (Reading database ... 100% 2021-10-01T23:03:32.8200484Z (Reading database ... 269078 files and directories currently installed.) 2021-10-01T23:03:32.8328201Z Preparing to unpack .../0-hdf5-helpers_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-10-01T23:03:32.8344627Z Unpacking hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-10-01T23:03:32.8699358Z Selecting previously unselected package libaec0:amd64. 2021-10-01T23:03:32.8975873Z Preparing to unpack .../1-libaec0_1.0.4-1_amd64.deb ... 2021-10-01T23:03:32.9001036Z Unpacking libaec0:amd64 (1.0.4-1) ... 2021-10-01T23:03:32.9379945Z Selecting previously unselected package libsz2:amd64. 2021-10-01T23:03:32.9662333Z Preparing to unpack .../2-libsz2_1.0.4-1_amd64.deb ... 2021-10-01T23:03:32.9677739Z Unpacking libsz2:amd64 (1.0.4-1) ... 2021-10-01T23:03:33.0008090Z Selecting previously unselected package libhdf5-103:amd64. 2021-10-01T23:03:33.0349737Z Preparing to unpack .../3-libhdf5-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-10-01T23:03:33.0365545Z Unpacking libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-10-01T23:03:33.2058857Z Selecting previously unselected package libhdf5-cpp-103:amd64. 2021-10-01T23:03:33.2380433Z Preparing to unpack .../4-libhdf5-cpp-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-10-01T23:03:33.2397081Z Unpacking libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-10-01T23:03:33.2797429Z Selecting previously unselected package libaec-dev:amd64. 2021-10-01T23:03:33.3118857Z Preparing to unpack .../5-libaec-dev_1.0.4-1_amd64.deb ... 2021-10-01T23:03:33.3133266Z Unpacking libaec-dev:amd64 (1.0.4-1) ... 2021-10-01T23:03:33.3460305Z Selecting previously unselected package libhdf5-dev. 2021-10-01T23:03:33.3738568Z Preparing to unpack .../6-libhdf5-dev_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-10-01T23:03:33.3752496Z Unpacking libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-10-01T23:03:33.7436470Z Setting up hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-10-01T23:03:33.7474157Z Setting up libaec0:amd64 (1.0.4-1) ... 2021-10-01T23:03:33.7510972Z Setting up libsz2:amd64 (1.0.4-1) ... 2021-10-01T23:03:33.7549786Z Setting up libaec-dev:amd64 (1.0.4-1) ... 2021-10-01T23:03:33.7582654Z Setting up libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-10-01T23:03:33.7611990Z Setting up libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-10-01T23:03:33.7648716Z Setting up libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-10-01T23:03:33.7737715Z update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 2021-10-01T23:03:33.7767444Z Processing triggers for man-db (2.9.1-1) ... 2021-10-01T23:03:37.8995382Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:03:39.9119860Z Reading package lists... 2021-10-01T23:03:40.1027578Z Building dependency tree... 2021-10-01T23:03:40.1048083Z Reading state information... 2021-10-01T23:03:40.2813377Z The following additional packages will be installed: 2021-10-01T23:03:40.2817071Z libdrm-dev libgl-dev libglu1-mesa libglx-dev 2021-10-01T23:03:40.3432071Z The following NEW packages will be installed: 2021-10-01T23:03:40.3441413Z libdrm-dev libgl-dev libglu1-mesa libglu1-mesa-dev libglx-dev 2021-10-01T23:03:40.3447496Z mesa-common-dev 2021-10-01T23:03:40.3852198Z 0 upgraded, 6 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:03:40.4443728Z Need to get 1922 kB of archives. 2021-10-01T23:03:40.4444708Z After this operation, 5634 kB of additional disk space will be used. 2021-10-01T23:03:40.4446879Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libdrm-dev amd64 2.4.105-3~20.04.2 [131 kB] 2021-10-01T23:03:40.4543753Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libglx-dev amd64 1.3.2-1~ubuntu0.20.04.1 [14.0 kB] 2021-10-01T23:03:40.4549995Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [97.8 kB] 2021-10-01T23:03:40.4579134Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa amd64 9.0.1-1build1 [168 kB] 2021-10-01T23:03:40.4625715Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa-dev amd64 9.0.1-1build1 [207 kB] 2021-10-01T23:03:40.4674566Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-common-dev amd64 21.0.3-0ubuntu0.3~20.04.2 [1304 kB] 2021-10-01T23:03:40.9768977Z Fetched 1922 kB in 0s (24.9 MB/s) 2021-10-01T23:03:41.0157054Z Selecting previously unselected package libdrm-dev:amd64. 2021-10-01T23:03:41.0239219Z (Reading database ... 2021-10-01T23:03:41.0240157Z (Reading database ... 5% 2021-10-01T23:03:41.0241179Z (Reading database ... 10% 2021-10-01T23:03:41.0241779Z (Reading database ... 15% 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and directories currently installed.) 2021-10-01T23:03:41.1764395Z Preparing to unpack .../0-libdrm-dev_2.4.105-3~20.04.2_amd64.deb ... 2021-10-01T23:03:41.1784751Z Unpacking libdrm-dev:amd64 (2.4.105-3~20.04.2) ... 2021-10-01T23:03:41.2260842Z Selecting previously unselected package libglx-dev:amd64. 2021-10-01T23:03:41.2560565Z Preparing to unpack .../1-libglx-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-10-01T23:03:41.2581378Z Unpacking libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-10-01T23:03:41.2979935Z Selecting previously unselected package libgl-dev:amd64. 2021-10-01T23:03:41.3288770Z Preparing to unpack .../2-libgl-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-10-01T23:03:41.3301433Z Unpacking libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-10-01T23:03:41.3780820Z Selecting previously unselected package libglu1-mesa:amd64. 2021-10-01T23:03:41.4056085Z Preparing to unpack .../3-libglu1-mesa_9.0.1-1build1_amd64.deb ... 2021-10-01T23:03:41.4083054Z Unpacking libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-10-01T23:03:41.4620930Z Selecting previously unselected package libglu1-mesa-dev:amd64. 2021-10-01T23:03:41.4869333Z Preparing to unpack .../4-libglu1-mesa-dev_9.0.1-1build1_amd64.deb ... 2021-10-01T23:03:41.4884257Z Unpacking libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-10-01T23:03:41.5620295Z Selecting previously unselected package mesa-common-dev:amd64. 2021-10-01T23:03:41.5883578Z Preparing to unpack .../5-mesa-common-dev_21.0.3-0ubuntu0.3~20.04.2_amd64.deb ... 2021-10-01T23:03:41.5896220Z Unpacking mesa-common-dev:amd64 (21.0.3-0ubuntu0.3~20.04.2) ... 2021-10-01T23:03:41.7958685Z Setting up libdrm-dev:amd64 (2.4.105-3~20.04.2) ... 2021-10-01T23:03:41.7999777Z Setting up libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-10-01T23:03:41.8037152Z Setting up libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-10-01T23:03:41.8067729Z Setting up libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-10-01T23:03:41.8105306Z Setting up libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-10-01T23:03:41.8138908Z Setting up mesa-common-dev:amd64 (21.0.3-0ubuntu0.3~20.04.2) ... 2021-10-01T23:03:41.8175076Z Processing triggers for man-db (2.9.1-1) ... 2021-10-01T23:03:44.0608025Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:03:46.0543596Z Reading package lists... 2021-10-01T23:03:46.2355643Z Building dependency tree... 2021-10-01T23:03:46.2376183Z Reading state information... 2021-10-01T23:03:46.4102899Z The following additional packages will be installed: 2021-10-01T23:03:46.4104980Z libprotobuf-lite17 libprotoc17 2021-10-01T23:03:46.4706022Z The following NEW packages will be installed: 2021-10-01T23:03:46.4709683Z libprotobuf-dev libprotobuf-lite17 libprotoc-dev libprotoc17 2021-10-01T23:03:46.4711062Z protobuf-compiler 2021-10-01T23:03:46.5100262Z 0 upgraded, 5 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:03:46.5898701Z Need to get 2754 kB of archives. 2021-10-01T23:03:46.5899673Z After this operation, 19.9 MB of additional disk space will be used. 2021-10-01T23:03:46.5901831Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-lite17 amd64 3.6.1.3-2ubuntu5 [132 kB] 2021-10-01T23:03:46.6037939Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc17 amd64 3.6.1.3-2ubuntu5 [646 kB] 2021-10-01T23:03:46.6256139Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-dev amd64 3.6.1.3-2ubuntu5 [1155 kB] 2021-10-01T23:03:46.6488958Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc-dev amd64 3.6.1.3-2ubuntu5 [793 kB] 2021-10-01T23:03:46.6607407Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 protobuf-compiler amd64 3.6.1.3-2ubuntu5 [27.6 kB] 2021-10-01T23:03:47.1413039Z Fetched 2754 kB in 0s (23.3 MB/s) 2021-10-01T23:03:47.1824133Z Selecting previously unselected package libprotobuf-lite17:amd64. 2021-10-01T23:03:47.1914666Z (Reading database ... 2021-10-01T23:03:47.1915341Z (Reading database ... 5% 2021-10-01T23:03:47.1915908Z (Reading database ... 10% 2021-10-01T23:03:47.1916453Z (Reading database ... 15% 2021-10-01T23:03:47.1917003Z (Reading database ... 20% 2021-10-01T23:03:47.1917538Z (Reading database ... 25% 2021-10-01T23:03:47.1918104Z (Reading database ... 30% 2021-10-01T23:03:47.1918652Z (Reading database ... 35% 2021-10-01T23:03:47.1919183Z (Reading database ... 40% 2021-10-01T23:03:47.1919725Z (Reading database ... 45% 2021-10-01T23:03:47.1920267Z (Reading database ... 50% 2021-10-01T23:03:47.1962394Z (Reading database ... 55% 2021-10-01T23:03:47.2008498Z (Reading database ... 60% 2021-10-01T23:03:47.2050520Z (Reading database ... 65% 2021-10-01T23:03:47.2091275Z (Reading database ... 70% 2021-10-01T23:03:47.2164897Z (Reading database ... 75% 2021-10-01T23:03:47.2397751Z (Reading database ... 80% 2021-10-01T23:03:47.3085356Z (Reading database ... 85% 2021-10-01T23:03:47.3263718Z (Reading database ... 90% 2021-10-01T23:03:47.3336679Z (Reading database ... 95% 2021-10-01T23:03:47.3337357Z (Reading database ... 100% 2021-10-01T23:03:47.3338376Z (Reading database ... 269777 files and directories currently installed.) 2021-10-01T23:03:47.3468591Z Preparing to unpack .../libprotobuf-lite17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-10-01T23:03:47.3492732Z Unpacking libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-10-01T23:03:47.3968202Z Selecting previously unselected package libprotoc17:amd64. 2021-10-01T23:03:47.4251040Z Preparing to unpack .../libprotoc17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-10-01T23:03:47.4263163Z Unpacking libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-10-01T23:03:47.5220645Z Selecting previously unselected package libprotobuf-dev:amd64. 2021-10-01T23:03:47.5532758Z Preparing to unpack .../libprotobuf-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-10-01T23:03:47.5547838Z Unpacking libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-10-01T23:03:47.7340787Z Selecting previously unselected package libprotoc-dev:amd64. 2021-10-01T23:03:47.7619601Z Preparing to unpack .../libprotoc-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-10-01T23:03:47.7632171Z Unpacking libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-10-01T23:03:47.8902362Z Selecting previously unselected package protobuf-compiler. 2021-10-01T23:03:47.9191269Z Preparing to unpack .../protobuf-compiler_3.6.1.3-2ubuntu5_amd64.deb ... 2021-10-01T23:03:47.9205223Z Unpacking protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-10-01T23:03:47.9958314Z Setting up libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-10-01T23:03:48.0022926Z Setting up protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-10-01T23:03:48.0060815Z Setting up libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-10-01T23:03:48.0092869Z Setting up libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-10-01T23:03:48.0129348Z Setting up libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-10-01T23:03:48.0175890Z Processing triggers for man-db (2.9.1-1) ... 2021-10-01T23:03:52.1330192Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:03:54.1951374Z Reading package lists... 2021-10-01T23:03:54.3813678Z Building dependency tree... 2021-10-01T23:03:54.3835864Z Reading state information... 2021-10-01T23:03:54.5603467Z The following additional packages will be installed: 2021-10-01T23:03:54.5605778Z i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 libasyncns0 2021-10-01T23:03:54.5607229Z libavc1394-0 libavcodec58 libavdevice58 libavfilter7 libavformat58 2021-10-01T23:03:54.5608388Z libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 libcaca0 2021-10-01T23:03:54.5612456Z libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 libcodec2-0.9 2021-10-01T23:03:54.5613883Z libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 libigdgmm11 2021-10-01T23:03:54.5615178Z libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-10-01T23:03:54.5616578Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-10-01T23:03:54.5618284Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-10-01T23:03:54.5619668Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-10-01T23:03:54.5621030Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-10-01T23:03:54.5622466Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-10-01T23:03:54.5623757Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-10-01T23:03:54.5625026Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-10-01T23:03:54.5626274Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-10-01T23:03:54.5627130Z Suggested packages: 2021-10-01T23:03:54.5628266Z ffmpeg-doc i965-va-driver-shaders libbluray-bdj jackd2 libportaudio2 2021-10-01T23:03:54.5629644Z opus-tools pulseaudio libraw1394-doc serdi sndiod sordi speex opencl-icd 2021-10-01T23:03:54.5631155Z libvdpau-va-gl1 nvidia-vdpau-driver nvidia-legacy-340xx-vdpau-driver 2021-10-01T23:03:54.5632524Z nvidia-legacy-304xx-vdpau-driver 2021-10-01T23:03:54.6541532Z The following NEW packages will be installed: 2021-10-01T23:03:54.6544112Z ffmpeg i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 2021-10-01T23:03:54.6545835Z libasyncns0 libavc1394-0 libavcodec58 libavdevice58 libavfilter7 2021-10-01T23:03:54.6547293Z libavformat58 libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 2021-10-01T23:03:54.6548921Z libcaca0 libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 2021-10-01T23:03:54.6550632Z libcodec2-0.9 libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 2021-10-01T23:03:54.6552289Z libigdgmm11 libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-10-01T23:03:54.6553988Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-10-01T23:03:54.6555645Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-10-01T23:03:54.6557246Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-10-01T23:03:54.6558861Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-10-01T23:03:54.6560533Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-10-01T23:03:54.6562071Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-10-01T23:03:54.6564293Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-10-01T23:03:54.6565945Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-10-01T23:03:54.6934129Z 0 upgraded, 76 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:03:54.7582642Z Need to get 47.5 MB of archives. 2021-10-01T23:03:54.7584051Z After this operation, 202 MB of additional disk space will be used. 2021-10-01T23:03:54.7586427Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaom0 amd64 1.0.0.errata1-3build1 [1160 kB] 2021-10-01T23:03:54.7931953Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva2 amd64 2.7.0-2 [53.5 kB] 2021-10-01T23:03:54.7939496Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-drm2 amd64 2.7.0-2 [7044 B] 2021-10-01T23:03:54.7947008Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-x11-2 amd64 2.7.0-2 [11.9 kB] 2021-10-01T23:03:54.7954172Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvdpau1 amd64 1.3-1ubuntu2 [25.6 kB] 2021-10-01T23:03:54.7960401Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1ubuntu1 [30.3 kB] 2021-10-01T23:03:54.7965762Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavutil56 amd64 7:4.2.4-1ubuntu0.1 [241 kB] 2021-10-01T23:03:54.7990776Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcodec2-0.9 amd64 0.9.2-2 [7886 kB] 2021-10-01T23:03:54.8737303Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgsm1 amd64 1.0.18-2 [24.4 kB] 2021-10-01T23:03:54.8744987Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmp3lame0 amd64 3.100-3 [133 kB] 2021-10-01T23:03:54.8761831Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libopus0 amd64 1.3.1-0ubuntu1 [191 kB] 2021-10-01T23:03:54.8782359Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libshine3 amd64 3.1.1-2 [23.2 kB] 2021-10-01T23:03:54.8789073Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsnappy1v5 amd64 1.1.8-1build1 [16.7 kB] 2021-10-01T23:03:54.8794967Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libspeex1 amd64 1.2~rc1.2-1.1ubuntu1 [53.2 kB] 2021-10-01T23:03:54.8800740Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsoxr0 amd64 0.1.3-2build1 [78.0 kB] 2021-10-01T23:03:54.8808438Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswresample3 amd64 7:4.2.4-1ubuntu0.1 [57.1 kB] 2021-10-01T23:03:54.8815847Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtheora0 amd64 1.1.1+dfsg.1-15ubuntu2 [162 kB] 2021-10-01T23:03:54.8844396Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtwolame0 amd64 0.4.0-2 [47.6 kB] 2021-10-01T23:03:54.8850464Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvorbisenc2 amd64 1.3.6-2ubuntu1 [70.7 kB] 2021-10-01T23:03:54.8856124Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwavpack1 amd64 5.2.0-1ubuntu0.1 [77.3 kB] 2021-10-01T23:03:54.8866413Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx264-155 amd64 2:0.155.2917+git0a84d98-2 [521 kB] 2021-10-01T23:03:54.8912952Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx265-179 amd64 3.2.1-1build1 [1060 kB] 2021-10-01T23:03:54.9007906Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxvidcore4 amd64 2:1.3.7-1 [201 kB] 2021-10-01T23:03:54.9029376Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi-common all 0.2.35-17 [32.5 kB] 2021-10-01T23:03:54.9034805Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi0 amd64 0.2.35-17 [237 kB] 2021-10-01T23:03:54.9057012Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavcodec58 amd64 7:4.2.4-1ubuntu0.1 [4876 kB] 2021-10-01T23:03:54.9604031Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libraw1394-11 amd64 2.1.2-1 [30.7 kB] 2021-10-01T23:03:54.9609525Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavc1394-0 amd64 0.5.4-5 [16.2 kB] 2021-10-01T23:03:54.9615879Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libass9 amd64 1:0.14.0-2 [88.0 kB] 2021-10-01T23:03:54.9626319Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbluray2 amd64 1:1.2.0-1 [138 kB] 2021-10-01T23:03:54.9637526Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libchromaprint1 amd64 1.4.3-3build1 [37.6 kB] 2021-10-01T23:03:54.9643670Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgme0 amd64 0.6.2-1build1 [123 kB] 2021-10-01T23:03:54.9655443Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmpg123-0 amd64 1.25.13-1 [124 kB] 2021-10-01T23:03:54.9670011Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenmpt0 amd64 0.4.11-1build1 [599 kB] 2021-10-01T23:03:54.9735838Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-gcrypt-4 amd64 0.9.3-2ubuntu2.2 [202 kB] 2021-10-01T23:03:54.9760844Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavformat58 amd64 7:4.2.4-1ubuntu0.1 [981 kB] 2021-10-01T23:03:54.9872124Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbs2b0 amd64 3.1.0+dfsg-2.2build1 [10.2 kB] 2021-10-01T23:03:54.9879144Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libflite1 amd64 2.1-release-3 [12.8 MB] 2021-10-01T23:03:55.1015401Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libserd-0-0 amd64 0.30.2-1 [46.6 kB] 2021-10-01T23:03:55.1022508Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsord-0-0 amd64 0.16.4-1 [19.5 kB] 2021-10-01T23:03:55.1029525Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsratom-0-0 amd64 0.6.4-1 [16.9 kB] 2021-10-01T23:03:55.1035756Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 liblilv-0-0 amd64 0.24.6-1ubuntu0.1 [40.6 kB] 2021-10-01T23:03:55.1048740Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmysofa1 amd64 1.0~dfsg0-1 [39.2 kB] 2021-10-01T23:03:55.1054341Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libpostproc55 amd64 7:4.2.4-1ubuntu0.1 [55.3 kB] 2021-10-01T23:03:55.1060821Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsamplerate0 amd64 0.1.9-2 [939 kB] 2021-10-01T23:03:55.1140590Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 librubberband2 amd64 1.8.2-1build1 [89.4 kB] 2021-10-01T23:03:55.1150780Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswscale5 amd64 7:4.2.4-1ubuntu0.1 [156 kB] 2021-10-01T23:03:55.1172894Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libvidstab1.1 amd64 1.1.0-2 [35.0 kB] 2021-10-01T23:03:55.1179150Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavfilter7 amd64 7:4.2.4-1ubuntu0.1 [1084 kB] 2021-10-01T23:03:55.1302015Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcaca0 amd64 0.99.beta19-2.1ubuntu1.20.04.1 [202 kB] 2021-10-01T23:03:55.1327407Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio18 amd64 2.0.0-2 [58.6 kB] 2021-10-01T23:03:55.1333457Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-cdda2 amd64 10.2+2.0.0-1 [17.6 kB] 2021-10-01T23:03:55.1339301Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-paranoia2 amd64 10.2+2.0.0-1 [16.2 kB] 2021-10-01T23:03:55.1344273Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdc1394-22 amd64 2.2.5-2.1 [79.6 kB] 2021-10-01T23:03:55.1354867Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libiec61883-0 amd64 1.2.0-3 [24.3 kB] 2021-10-01T23:03:55.1359773Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjack-jackd2-0 amd64 1.9.12~dfsg-2ubuntu2 [267 kB] 2021-10-01T23:03:55.1396009Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal-data all 1:1.19.1-1 [162 kB] 2021-10-01T23:03:55.1412255Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsndio7.0 amd64 1.5.0-3 [24.5 kB] 2021-10-01T23:03:55.1419903Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal1 amd64 1:1.19.1-1 [492 kB] 2021-10-01T23:03:55.1465602Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasyncns0 amd64 0.8-6 [12.1 kB] 2021-10-01T23:03:55.1467431Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libflac8 amd64 1.3.3-1build1 [103 kB] 2021-10-01T23:03:55.1495588Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libsndfile1 amd64 1.0.28-7ubuntu0.1 [170 kB] 2021-10-01T23:03:55.1518507Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libpulse0 amd64 1:13.99.1-1ubuntu3.11 [262 kB] 2021-10-01T23:03:55.1553145Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsdl2-2.0-0 amd64 2.0.10+dfsg1-3 [407 kB] 2021-10-01T23:03:55.1602557Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavdevice58 amd64 7:4.2.4-1ubuntu0.1 [74.3 kB] 2021-10-01T23:03:55.1614590Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavresample4 amd64 7:4.2.4-1ubuntu0.1 [54.2 kB] 2021-10-01T23:03:55.1625992Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 ffmpeg amd64 7:4.2.4-1ubuntu0.1 [1453 kB] 2021-10-01T23:03:55.1807890Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libigdgmm11 amd64 20.1.1+ds1-1 [111 kB] 2021-10-01T23:03:55.1817008Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 intel-media-va-driver amd64 20.1.1+dfsg1-1 [1764 kB] 2021-10-01T23:03:55.1980634Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaacs0 amd64 0.9.0-2 [50.1 kB] 2021-10-01T23:03:55.1989340Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbdplus0 amd64 0.1.2-3 [47.3 kB] 2021-10-01T23:03:55.1995046Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 mesa-va-drivers amd64 21.0.3-0ubuntu0.3~20.04.2 [2825 kB] 2021-10-01T23:03:55.2313695Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-vdpau-drivers amd64 21.0.3-0ubuntu0.3~20.04.2 [2944 kB] 2021-10-01T23:03:55.2659468Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 i965-va-driver amd64 2.4.0-0ubuntu1 [924 kB] 2021-10-01T23:03:55.2762555Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 va-driver-all amd64 2.7.0-2 [4020 B] 2021-10-01T23:03:55.2765331Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 vdpau-driver-all amd64 1.3-1ubuntu2 [4596 B] 2021-10-01T23:03:55.9453849Z Fetched 47.5 MB in 1s (86.7 MB/s) 2021-10-01T23:03:55.9868600Z Selecting previously unselected package libaom0:amd64. 2021-10-01T23:03:55.9953048Z (Reading database ... 2021-10-01T23:03:55.9953993Z (Reading database ... 5% 2021-10-01T23:03:55.9954814Z (Reading database ... 10% 2021-10-01T23:03:55.9956378Z (Reading database ... 15% 2021-10-01T23:03:55.9956952Z (Reading database ... 20% 2021-10-01T23:03:55.9957501Z (Reading database ... 25% 2021-10-01T23:03:55.9958049Z (Reading database ... 30% 2021-10-01T23:03:55.9958582Z (Reading database ... 35% 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(0.24.6-1ubuntu0.1) ... 2021-10-01T23:04:06.2133709Z Setting up libpulse0:amd64 (1:13.99.1-1ubuntu3.11) ... 2021-10-01T23:04:06.2244656Z Setting up libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-10-01T23:04:06.2279792Z Setting up libavresample4:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-10-01T23:04:06.2314032Z Setting up libavcodec58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-10-01T23:04:06.2382322Z Setting up libsdl2-2.0-0:amd64 (2.0.10+dfsg1-3) ... 2021-10-01T23:04:06.2416978Z Setting up libchromaprint1:amd64 (1.4.3-3build1) ... 2021-10-01T23:04:06.2448052Z Setting up libavformat58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-10-01T23:04:06.2487868Z Setting up libavfilter7:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-10-01T23:04:06.2520912Z Setting up libavdevice58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-10-01T23:04:06.2550120Z Setting up ffmpeg (7:4.2.4-1ubuntu0.1) ... 2021-10-01T23:04:06.2669307Z Processing triggers for man-db (2.9.1-1) ... 2021-10-01T23:04:11.0448753Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:04:13.0401615Z Reading package lists... 2021-10-01T23:04:13.2348622Z Building dependency tree... 2021-10-01T23:04:13.2368570Z Reading state information... 2021-10-01T23:04:13.4078225Z The following additional packages will be installed: 2021-10-01T23:04:13.4082584Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-10-01T23:04:13.4700412Z The following NEW packages will be installed: 2021-10-01T23:04:13.4702775Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-10-01T23:04:13.4707550Z libmagick++-dev 2021-10-01T23:04:13.5086229Z 0 upgraded, 4 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:04:13.5755875Z Need to get 308 kB of archives. 2021-10-01T23:04:13.5758123Z After this operation, 2204 kB of additional disk space will be used. 2021-10-01T23:04:13.5760844Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6-headers all 8:6.9.10.23+dfsg-2.1ubuntu11.4 [47.5 kB] 2021-10-01T23:04:13.5797832Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-8 amd64 8:6.9.10.23+dfsg-2.1ubuntu11.4 [133 kB] 2021-10-01T23:04:13.5854230Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-dev amd64 8:6.9.10.23+dfsg-2.1ubuntu11.4 [127 kB] 2021-10-01T23:04:13.5902654Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-dev all 8:6.9.10.23+dfsg-2.1ubuntu11.4 [1412 B] 2021-10-01T23:04:14.0816578Z Fetched 308 kB in 0s (6037 kB/s) 2021-10-01T23:04:14.1193717Z Selecting previously unselected package libmagick++-6-headers. 2021-10-01T23:04:14.1281930Z (Reading database ... 2021-10-01T23:04:14.1283030Z (Reading database ... 5% 2021-10-01T23:04:14.1283811Z (Reading database ... 10% 2021-10-01T23:04:14.1284565Z (Reading database ... 15% 2021-10-01T23:04:14.1285970Z (Reading database ... 20% 2021-10-01T23:04:14.1286834Z (Reading database ... 25% 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.../libmagick++-6-headers_8%3a6.9.10.23+dfsg-2.1ubuntu11.4_all.deb ... 2021-10-01T23:04:14.2946325Z Unpacking libmagick++-6-headers (8:6.9.10.23+dfsg-2.1ubuntu11.4) ... 2021-10-01T23:04:14.3420773Z Selecting previously unselected package libmagick++-6.q16-8:amd64. 2021-10-01T23:04:14.3699867Z Preparing to unpack .../libmagick++-6.q16-8_8%3a6.9.10.23+dfsg-2.1ubuntu11.4_amd64.deb ... 2021-10-01T23:04:14.3721876Z Unpacking libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.4) ... 2021-10-01T23:04:14.4140966Z Selecting previously unselected package libmagick++-6.q16-dev:amd64. 2021-10-01T23:04:14.4445623Z Preparing to unpack .../libmagick++-6.q16-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.4_amd64.deb ... 2021-10-01T23:04:14.4462609Z Unpacking libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.4) ... 2021-10-01T23:04:14.5060142Z Selecting previously unselected package libmagick++-dev. 2021-10-01T23:04:14.5374578Z Preparing to unpack .../libmagick++-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.4_all.deb ... 2021-10-01T23:04:14.5484985Z Unpacking libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.4) ... 2021-10-01T23:04:14.6123913Z Setting up libmagick++-6-headers (8:6.9.10.23+dfsg-2.1ubuntu11.4) ... 2021-10-01T23:04:14.6222172Z Setting up libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.4) ... 2021-10-01T23:04:14.6254169Z Setting up libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.4) ... 2021-10-01T23:04:14.6287218Z Setting up libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.4) ... 2021-10-01T23:04:14.6403890Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:04:16.6562947Z Reading package lists... 2021-10-01T23:04:16.8501393Z Building dependency tree... 2021-10-01T23:04:16.8539844Z Reading state information... 2021-10-01T23:04:17.0314824Z imagemagick is already the newest version (8:6.9.10.23+dfsg-2.1ubuntu11.4). 2021-10-01T23:04:17.0316819Z The following additional packages will be installed: 2021-10-01T23:04:17.0318889Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 libgs9 libgs9-common 2021-10-01T23:04:17.0321916Z libijs-0.35 libjbig2dec0 2021-10-01T23:04:17.0325451Z Suggested packages: 2021-10-01T23:04:17.0328257Z fonts-noto fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre 2021-10-01T23:04:17.0330764Z ghostscript-x 2021-10-01T23:04:17.0922119Z The following NEW packages will be installed: 2021-10-01T23:04:17.0924854Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 ghostscript libgs9 2021-10-01T23:04:17.0932022Z libgs9-common libijs-0.35 libjbig2dec0 2021-10-01T23:04:17.1338993Z 0 upgraded, 8 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:04:17.1900076Z Need to get 11.2 MB of archives. 2021-10-01T23:04:17.1901681Z After this operation, 39.1 MB of additional disk space will be used. 2021-10-01T23:04:17.1903917Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-droid-fallback all 1:6.0.1r16-1.1 [1805 kB] 2021-10-01T23:04:17.2532513Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 fonts-noto-mono all 20200323-1build1~ubuntu20.04.1 [80.6 kB] 2021-10-01T23:04:17.2548884Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-urw-base35 all 20170801.1-3 [6333 kB] 2021-10-01T23:04:17.3595700Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9-common all 9.50~dfsg-5ubuntu4.3 [681 kB] 2021-10-01T23:04:17.3731414Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libijs-0.35 amd64 0.35-15 [15.7 kB] 2021-10-01T23:04:17.3741515Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjbig2dec0 amd64 0.18-1ubuntu1 [60.0 kB] 2021-10-01T23:04:17.3755507Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9 amd64 9.50~dfsg-5ubuntu4.3 [2172 kB] 2021-10-01T23:04:17.4065524Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 ghostscript amd64 9.50~dfsg-5ubuntu4.3 [51.8 kB] 2021-10-01T23:04:17.9011798Z Fetched 11.2 MB in 0s (46.4 MB/s) 2021-10-01T23:04:17.9395445Z Selecting previously unselected package fonts-droid-fallback. 2021-10-01T23:04:17.9486134Z (Reading database ... 2021-10-01T23:04:17.9486774Z (Reading database ... 5% 2021-10-01T23:04:17.9487335Z (Reading database ... 10% 2021-10-01T23:04:17.9487891Z (Reading database ... 15% 2021-10-01T23:04:17.9488427Z (Reading database ... 20% 2021-10-01T23:04:17.9488975Z (Reading database ... 25% 2021-10-01T23:04:17.9489507Z (Reading database ... 30% 2021-10-01T23:04:17.9490055Z (Reading database ... 35% 2021-10-01T23:04:17.9490832Z (Reading database ... 40% 2021-10-01T23:04:17.9491367Z (Reading database ... 45% 2021-10-01T23:04:17.9491912Z (Reading database ... 50% 2021-10-01T23:04:17.9529251Z (Reading database ... 55% 2021-10-01T23:04:17.9558713Z (Reading database ... 60% 2021-10-01T23:04:17.9604647Z (Reading database ... 65% 2021-10-01T23:04:17.9644921Z (Reading database ... 70% 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2021-10-01T23:04:18.4663392Z Preparing to unpack .../2-fonts-urw-base35_20170801.1-3_all.deb ... 2021-10-01T23:04:18.5422257Z Unpacking fonts-urw-base35 (20170801.1-3) ... 2021-10-01T23:04:18.9921676Z Selecting previously unselected package libgs9-common. 2021-10-01T23:04:19.0234285Z Preparing to unpack .../3-libgs9-common_9.50~dfsg-5ubuntu4.3_all.deb ... 2021-10-01T23:04:19.0248228Z Unpacking libgs9-common (9.50~dfsg-5ubuntu4.3) ... 2021-10-01T23:04:19.1421027Z Selecting previously unselected package libijs-0.35:amd64. 2021-10-01T23:04:19.1707572Z Preparing to unpack .../4-libijs-0.35_0.35-15_amd64.deb ... 2021-10-01T23:04:19.1732806Z Unpacking libijs-0.35:amd64 (0.35-15) ... 2021-10-01T23:04:19.2131334Z Selecting previously unselected package libjbig2dec0:amd64. 2021-10-01T23:04:19.2445813Z Preparing to unpack .../5-libjbig2dec0_0.18-1ubuntu1_amd64.deb ... 2021-10-01T23:04:19.2460235Z Unpacking libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-10-01T23:04:19.2859736Z Selecting previously unselected package libgs9:amd64. 2021-10-01T23:04:19.3145714Z Preparing to unpack .../6-libgs9_9.50~dfsg-5ubuntu4.3_amd64.deb ... 2021-10-01T23:04:19.3158457Z Unpacking libgs9:amd64 (9.50~dfsg-5ubuntu4.3) ... 2021-10-01T23:04:19.6140199Z Selecting previously unselected package ghostscript. 2021-10-01T23:04:19.6456409Z Preparing to unpack .../7-ghostscript_9.50~dfsg-5ubuntu4.3_amd64.deb ... 2021-10-01T23:04:19.6468194Z Unpacking ghostscript (9.50~dfsg-5ubuntu4.3) ... 2021-10-01T23:04:19.7379488Z Setting up fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-10-01T23:04:19.7442626Z Setting up libijs-0.35:amd64 (0.35-15) ... 2021-10-01T23:04:19.7485123Z Setting up fonts-urw-base35 (20170801.1-3) ... 2021-10-01T23:04:19.8245708Z Setting up libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-10-01T23:04:19.8282883Z Setting up fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-10-01T23:04:19.8574730Z Setting up libgs9-common (9.50~dfsg-5ubuntu4.3) ... 2021-10-01T23:04:19.8641424Z Setting up libgs9:amd64 (9.50~dfsg-5ubuntu4.3) ... 2021-10-01T23:04:19.8677116Z Setting up ghostscript (9.50~dfsg-5ubuntu4.3) ... 2021-10-01T23:04:19.8843592Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-10-01T23:04:20.0065273Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:04:20.0446928Z Processing triggers for man-db (2.9.1-1) ... 2021-10-01T23:04:26.4946466Z Reading package lists... 2021-10-01T23:04:26.6798435Z Building dependency tree... 2021-10-01T23:04:26.6819904Z Reading state information... 2021-10-01T23:04:26.8511720Z The following additional packages will be installed: 2021-10-01T23:04:26.8515087Z libudunits2-0 libudunits2-data 2021-10-01T23:04:26.9119182Z The following NEW packages will be installed: 2021-10-01T23:04:26.9121752Z libudunits2-0 libudunits2-data libudunits2-dev 2021-10-01T23:04:26.9544129Z 0 upgraded, 3 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:04:27.0194623Z Need to get 429 kB of archives. 2021-10-01T23:04:27.0196322Z After this operation, 1026 kB of additional disk space will be used. 2021-10-01T23:04:27.0200189Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-data all 2.2.26-5 [18.8 kB] 2021-10-01T23:04:27.0227592Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-0 amd64 2.2.26-5 [48.9 kB] 2021-10-01T23:04:27.0245269Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-dev amd64 2.2.26-5 [362 kB] 2021-10-01T23:04:27.5315275Z Fetched 429 kB in 0s (7436 kB/s) 2021-10-01T23:04:27.5656177Z Selecting previously unselected package libudunits2-data. 2021-10-01T23:04:27.5740672Z (Reading database ... 2021-10-01T23:04:27.5741981Z (Reading database ... 5% 2021-10-01T23:04:27.5742804Z (Reading database ... 10% 2021-10-01T23:04:27.5743565Z (Reading database ... 15% 2021-10-01T23:04:27.5744310Z (Reading database ... 20% 2021-10-01T23:04:27.5745052Z (Reading database ... 25% 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.../libudunits2-data_2.2.26-5_all.deb ... 2021-10-01T23:04:27.7197098Z Unpacking libudunits2-data (2.2.26-5) ... 2021-10-01T23:04:27.7567384Z Selecting previously unselected package libudunits2-0:amd64. 2021-10-01T23:04:27.7872445Z Preparing to unpack .../libudunits2-0_2.2.26-5_amd64.deb ... 2021-10-01T23:04:27.7903244Z Unpacking libudunits2-0:amd64 (2.2.26-5) ... 2021-10-01T23:04:27.8260405Z Selecting previously unselected package libudunits2-dev:amd64. 2021-10-01T23:04:27.8531863Z Preparing to unpack .../libudunits2-dev_2.2.26-5_amd64.deb ... 2021-10-01T23:04:27.8547671Z Unpacking libudunits2-dev:amd64 (2.2.26-5) ... 2021-10-01T23:04:27.9408241Z Setting up libudunits2-data (2.2.26-5) ... 2021-10-01T23:04:27.9443798Z Setting up libudunits2-0:amd64 (2.2.26-5) ... 2021-10-01T23:04:27.9480484Z Setting up libudunits2-dev:amd64 (2.2.26-5) ... 2021-10-01T23:04:27.9511396Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-10-01T23:04:28.0890623Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:04:30.0787988Z Reading package lists... 2021-10-01T23:04:30.2693570Z Building dependency tree... 2021-10-01T23:04:30.2715507Z Reading state information... 2021-10-01T23:04:30.4967994Z The following NEW packages will be installed: 2021-10-01T23:04:30.4972919Z libjq-dev 2021-10-01T23:04:30.5342385Z 0 upgraded, 1 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:04:30.5889735Z Need to get 11.2 kB of archives. 2021-10-01T23:04:30.5890735Z After this operation, 47.1 kB of additional disk space will be used. 2021-10-01T23:04:30.5893268Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libjq-dev amd64 1.6-1ubuntu0.20.04.1 [11.2 kB] 2021-10-01T23:04:31.0719510Z Fetched 11.2 kB in 0s (457 kB/s) 2021-10-01T23:04:31.1075622Z Selecting previously unselected package libjq-dev:amd64. 2021-10-01T23:04:31.1163091Z (Reading database ... 2021-10-01T23:04:31.1164067Z (Reading database ... 5% 2021-10-01T23:04:31.1164618Z (Reading 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libmng2 amd64 2.0.3+dfsg-3 [168 kB] 2021-10-01T23:04:34.3494186Z Fetched 168 kB in 0s (5998 kB/s) 2021-10-01T23:04:34.3864405Z Selecting previously unselected package libmng2:amd64. 2021-10-01T23:04:34.3953452Z (Reading database ... 2021-10-01T23:04:34.3954548Z (Reading database ... 5% 2021-10-01T23:04:34.3955346Z (Reading database ... 10% 2021-10-01T23:04:34.3956121Z (Reading database ... 15% 2021-10-01T23:04:34.3956866Z (Reading database ... 20% 2021-10-01T23:04:34.3957623Z (Reading database ... 25% 2021-10-01T23:04:34.3958382Z (Reading database ... 30% 2021-10-01T23:04:34.3959122Z (Reading database ... 35% 2021-10-01T23:04:34.3959871Z (Reading database ... 40% 2021-10-01T23:04:34.3960618Z (Reading database ... 45% 2021-10-01T23:04:34.3961419Z (Reading database ... 50% 2021-10-01T23:04:34.3999917Z (Reading database ... 55% 2021-10-01T23:04:34.4028167Z (Reading database ... 60% 2021-10-01T23:04:34.4074054Z (Reading database ... 65% 2021-10-01T23:04:34.4115310Z (Reading database ... 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2021-10-01T23:04:37.1077490Z Reading package lists... 2021-10-01T23:04:37.2943081Z Building dependency tree... 2021-10-01T23:04:37.2964643Z Reading state information... 2021-10-01T23:04:37.4342224Z E: Unable to locate package libapparmor-devel 2021-10-01T23:04:37.5055035Z Reading package lists... 2021-10-01T23:04:37.6973611Z Building dependency tree... 2021-10-01T23:04:37.6996054Z Reading state information... 2021-10-01T23:04:37.8764603Z The following additional packages will be installed: 2021-10-01T23:04:37.8767687Z libij-java 2021-10-01T23:04:37.9349243Z The following NEW packages will be installed: 2021-10-01T23:04:37.9358452Z imagej libij-java 2021-10-01T23:04:37.9769950Z 0 upgraded, 2 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:04:38.0310362Z Need to get 2328 kB of archives. 2021-10-01T23:04:38.0311896Z After this operation, 2498 kB of additional disk space will be used. 2021-10-01T23:04:38.0314605Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libij-java all 1.52r-1 [2284 kB] 2021-10-01T23:04:38.0912521Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 imagej all 1.52r-1 [43.7 kB] 2021-10-01T23:04:38.5754356Z Fetched 2328 kB in 0s (27.9 MB/s) 2021-10-01T23:04:38.6095722Z Selecting previously unselected package libij-java. 2021-10-01T23:04:38.6182231Z (Reading database ... 2021-10-01T23:04:38.6183309Z (Reading database ... 5% 2021-10-01T23:04:38.6184067Z (Reading database ... 10% 2021-10-01T23:04:38.6184845Z (Reading database ... 15% 2021-10-01T23:04:38.6185597Z (Reading database ... 20% 2021-10-01T23:04:38.6186332Z (Reading database ... 25% 2021-10-01T23:04:38.6187079Z (Reading database ... 30% 2021-10-01T23:04:38.6187828Z (Reading database ... 35% 2021-10-01T23:04:38.6188552Z (Reading database ... 40% 2021-10-01T23:04:38.6189302Z (Reading database ... 45% 2021-10-01T23:04:38.6190044Z (Reading database ... 50% 2021-10-01T23:04:38.6243299Z (Reading database ... 55% 2021-10-01T23:04:38.6274638Z (Reading 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2021-10-01T23:04:38.9965309Z Setting up imagej (1.52r-1) ... 2021-10-01T23:04:39.0012779Z Processing triggers for hicolor-icon-theme (0.17-2) ... 2021-10-01T23:04:39.5116369Z Processing triggers for man-db (2.9.1-1) ... 2021-10-01T23:04:43.5700562Z Processing triggers for mime-support (3.64ubuntu1) ... 2021-10-01T23:04:45.7198147Z Reading package lists... 2021-10-01T23:04:45.9212500Z Building dependency tree... 2021-10-01T23:04:45.9235149Z Reading state information... 2021-10-01T23:04:46.1183474Z Suggested packages: 2021-10-01T23:04:46.1185336Z bowtie2-examples 2021-10-01T23:04:46.1743807Z The following NEW packages will be installed: 2021-10-01T23:04:46.1754476Z bowtie2 2021-10-01T23:04:46.2141955Z 0 upgraded, 1 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:04:46.2662304Z Need to get 1324 kB of archives. 2021-10-01T23:04:46.2663684Z After this operation, 5630 kB of additional disk space will be used. 2021-10-01T23:04:46.2665985Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 bowtie2 amd64 2.3.5.1-6build1 [1324 kB] 2021-10-01T23:04:47.7133788Z Fetched 1324 kB in 0s (21.3 MB/s) 2021-10-01T23:04:47.7143572Z Selecting previously unselected package bowtie2. 2021-10-01T23:04:47.7144720Z (Reading database ... 2021-10-01T23:04:47.7145544Z (Reading database ... 5% 2021-10-01T23:04:47.7146243Z (Reading database ... 10% 2021-10-01T23:04:47.7146915Z (Reading database ... 15% 2021-10-01T23:04:47.7147834Z (Reading database ... 20% 2021-10-01T23:04:47.7148540Z (Reading database ... 25% 2021-10-01T23:04:47.7149209Z (Reading database ... 30% 2021-10-01T23:04:47.7149861Z (Reading database ... 35% 2021-10-01T23:04:47.7150538Z (Reading database ... 40% 2021-10-01T23:04:47.7151214Z (Reading database ... 45% 2021-10-01T23:04:47.7151892Z (Reading database ... 50% 2021-10-01T23:04:47.7152568Z (Reading database ... 55% 2021-10-01T23:04:47.7153235Z (Reading database ... 60% 2021-10-01T23:04:47.7153887Z (Reading database 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Unable to locate package install 2021-10-01T23:04:53.7310154Z E: Unable to locate package gdal 2021-10-01T23:04:53.8077840Z Reading package lists... 2021-10-01T23:04:54.0038931Z Building dependency tree... 2021-10-01T23:04:54.0060441Z Reading state information... 2021-10-01T23:04:54.0351561Z Package insighttoolkit4-python is not available, but is referred to by another package. 2021-10-01T23:04:54.0353331Z This may mean that the package is missing, has been obsoleted, or 2021-10-01T23:04:54.0354447Z is only available from another source 2021-10-01T23:04:54.0355062Z 2021-10-01T23:04:54.1468059Z E: Package 'insighttoolkit4-python' has no installation candidate 2021-10-01T23:04:54.2184623Z Reading package lists... 2021-10-01T23:04:54.4113797Z Building dependency tree... 2021-10-01T23:04:54.4135367Z Reading state information... 2021-10-01T23:04:54.4415369Z Package libav-tools is not available, but is referred to by another package. 2021-10-01T23:04:54.4416488Z This may mean that the package is missing, has been obsoleted, or 2021-10-01T23:04:54.4417271Z is only available from another source 2021-10-01T23:04:54.4418326Z However the following packages replace it: 2021-10-01T23:04:54.4418933Z ffmpeg 2021-10-01T23:04:54.4419197Z 2021-10-01T23:04:54.5579506Z E: Package 'libav-tools' has no installation candidate 2021-10-01T23:04:54.6335313Z Reading package lists... 2021-10-01T23:04:54.8263576Z Building dependency tree... 2021-10-01T23:04:54.8286844Z Reading state information... 2021-10-01T23:04:55.0082816Z The following additional packages will be installed: 2021-10-01T23:04:55.0085247Z libgcrypt20-dev libgit2-28 libgpg-error-dev libhttp-parser-dev 2021-10-01T23:04:55.0089204Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-10-01T23:04:55.0090703Z libssh2-1-dev 2021-10-01T23:04:55.0091536Z Suggested packages: 2021-10-01T23:04:55.0092662Z libgcrypt20-doc libmbedtls-doc 2021-10-01T23:04:55.0709233Z The following NEW packages will be installed: 2021-10-01T23:04:55.0711770Z libgcrypt20-dev libgit2-28 libgit2-dev libgpg-error-dev libhttp-parser-dev 2021-10-01T23:04:55.0713720Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-10-01T23:04:55.0716435Z libssh2-1-dev 2021-10-01T23:04:55.1126909Z 0 upgraded, 11 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:04:55.1767010Z Need to get 2668 kB of archives. 2021-10-01T23:04:55.1767962Z After this operation, 11.2 MB of additional disk space will be used. 2021-10-01T23:04:55.1770375Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgpg-error-dev amd64 1.37-1 [109 kB] 2021-10-01T23:04:55.1858361Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgcrypt20-dev amd64 1.8.5-5ubuntu1.1 [471 kB] 2021-10-01T23:04:55.2050420Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser2.9 amd64 2.9.2-2 [21.8 kB] 2021-10-01T23:04:55.2057628Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedcrypto3 amd64 2.16.4-1ubuntu2 [150 kB] 2021-10-01T23:04:55.2092509Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedx509-0 amd64 2.16.4-1ubuntu2 [42.3 kB] 2021-10-01T23:04:55.2105853Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls12 amd64 2.16.4-1ubuntu2 [71.8 kB] 2021-10-01T23:04:55.2123768Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-28 amd64 0.28.4+dfsg.1-2 [403 kB] 2021-10-01T23:04:55.2201791Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls-dev amd64 2.16.4-1ubuntu2 [444 kB] 2021-10-01T23:04:55.2299936Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libssh2-1-dev amd64 1.8.0-2.1build1 [244 kB] 2021-10-01T23:04:55.2340481Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser-dev amd64 2.9.2-2 [20.2 kB] 2021-10-01T23:04:55.2348761Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-dev amd64 0.28.4+dfsg.1-2 [691 kB] 2021-10-01T23:04:55.7395088Z Fetched 2668 kB in 0s (28.1 MB/s) 2021-10-01T23:04:55.7767402Z Selecting previously unselected package libgpg-error-dev. 2021-10-01T23:04:55.7856612Z (Reading database ... 2021-10-01T23:04:55.7857686Z (Reading database ... 5% 2021-10-01T23:04:55.7861099Z (Reading database ... 10% 2021-10-01T23:04:55.7861652Z (Reading database ... 15% 2021-10-01T23:04:55.7862207Z (Reading database ... 20% 2021-10-01T23:04:55.7862759Z (Reading database ... 25% 2021-10-01T23:04:55.7863290Z (Reading database ... 30% 2021-10-01T23:04:55.7863845Z (Reading database ... 35% 2021-10-01T23:04:55.7864390Z (Reading database ... 40% 2021-10-01T23:04:55.7864921Z (Reading database ... 45% 2021-10-01T23:04:55.7865462Z (Reading database ... 50% 2021-10-01T23:04:55.7916304Z (Reading database ... 55% 2021-10-01T23:04:55.7943374Z (Reading database ... 60% 2021-10-01T23:04:55.7985997Z (Reading 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package libhttp-parser2.9:amd64. 2021-10-01T23:04:56.1440367Z Preparing to unpack .../02-libhttp-parser2.9_2.9.2-2_amd64.deb ... 2021-10-01T23:04:56.1471387Z Unpacking libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-10-01T23:04:56.1940359Z Selecting previously unselected package libmbedcrypto3:amd64. 2021-10-01T23:04:56.2216535Z Preparing to unpack .../03-libmbedcrypto3_2.16.4-1ubuntu2_amd64.deb ... 2021-10-01T23:04:56.2228281Z Unpacking libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-10-01T23:04:56.2702003Z Selecting previously unselected package libmbedx509-0:amd64. 2021-10-01T23:04:56.3030308Z Preparing to unpack .../04-libmbedx509-0_2.16.4-1ubuntu2_amd64.deb ... 2021-10-01T23:04:56.3042433Z Unpacking libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-10-01T23:04:56.3501201Z Selecting previously unselected package libmbedtls12:amd64. 2021-10-01T23:04:56.3816252Z Preparing to unpack .../05-libmbedtls12_2.16.4-1ubuntu2_amd64.deb ... 2021-10-01T23:04:56.3829699Z Unpacking libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-10-01T23:04:56.4260779Z Selecting previously unselected package libgit2-28:amd64. 2021-10-01T23:04:56.4548591Z Preparing to unpack .../06-libgit2-28_0.28.4+dfsg.1-2_amd64.deb ... 2021-10-01T23:04:56.4559226Z Unpacking libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-10-01T23:04:56.5302346Z Selecting previously unselected package libmbedtls-dev:amd64. 2021-10-01T23:04:56.5568511Z Preparing to unpack .../07-libmbedtls-dev_2.16.4-1ubuntu2_amd64.deb ... 2021-10-01T23:04:56.5586067Z Unpacking libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-10-01T23:04:56.6380144Z Selecting previously unselected package libssh2-1-dev:amd64. 2021-10-01T23:04:56.6726061Z Preparing to unpack .../08-libssh2-1-dev_1.8.0-2.1build1_amd64.deb ... 2021-10-01T23:04:56.6750296Z Unpacking libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-10-01T23:04:56.7501253Z Selecting previously unselected package libhttp-parser-dev. 2021-10-01T23:04:56.7798480Z Preparing to unpack .../09-libhttp-parser-dev_2.9.2-2_amd64.deb ... 2021-10-01T23:04:56.7812254Z Unpacking libhttp-parser-dev (2.9.2-2) ... 2021-10-01T23:04:56.8099925Z Selecting previously unselected package libgit2-dev:amd64. 2021-10-01T23:04:56.8398260Z Preparing to unpack .../10-libgit2-dev_0.28.4+dfsg.1-2_amd64.deb ... 2021-10-01T23:04:56.8413422Z Unpacking libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-10-01T23:04:56.9931425Z Setting up libgpg-error-dev (1.37-1) ... 2021-10-01T23:04:56.9974062Z Setting up libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-10-01T23:04:57.0021722Z Setting up libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-10-01T23:04:57.0065233Z Setting up libhttp-parser-dev (2.9.2-2) ... 2021-10-01T23:04:57.0091352Z Setting up libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-10-01T23:04:57.0146939Z Setting up libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-10-01T23:04:57.0175217Z Setting up libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-10-01T23:04:57.0211398Z Setting up libgcrypt20-dev (1.8.5-5ubuntu1.1) ... 2021-10-01T23:04:57.0241077Z Setting up libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-10-01T23:04:57.0271581Z Setting up libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-10-01T23:04:57.0303720Z Setting up libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-10-01T23:04:57.0343077Z Processing triggers for man-db (2.9.1-1) ... 2021-10-01T23:05:06.7777733Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-10-01T23:05:06.9076475Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:05:08.9174925Z Reading package lists... 2021-10-01T23:05:09.1070783Z Building dependency tree... 2021-10-01T23:05:09.1093922Z Reading state information... 2021-10-01T23:05:09.3038383Z libtiff-dev is already the newest version (4.1.0+git191117-2ubuntu0.20.04.2). 2021-10-01T23:05:09.3039918Z libtiff-dev set to manually installed. 2021-10-01T23:05:09.3935406Z 0 upgraded, 0 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:05:09.5344872Z Reading package lists... 2021-10-01T23:05:09.7329819Z Building dependency tree... 2021-10-01T23:05:09.7352623Z Reading state information... 2021-10-01T23:05:09.9132893Z unixodbc-dev is already the newest version (2.3.7). 2021-10-01T23:05:10.0036203Z 0 upgraded, 0 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:05:10.1474729Z Reading package lists... 2021-10-01T23:05:10.3383112Z Building dependency tree... 2021-10-01T23:05:10.3403220Z Reading state information... 2021-10-01T23:05:10.5742365Z The following NEW packages will be installed: 2021-10-01T23:05:10.5746021Z libsodium-dev 2021-10-01T23:05:10.6122600Z 0 upgraded, 1 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:05:10.6638507Z Need to get 169 kB of archives. 2021-10-01T23:05:10.6641042Z After this operation, 826 kB of additional disk space will be used. 2021-10-01T23:05:10.6643932Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsodium-dev amd64 1.0.18-1 [169 kB] 2021-10-01T23:05:11.1628234Z Fetched 169 kB in 0s (5600 kB/s) 2021-10-01T23:05:11.1984151Z Selecting previously unselected package libsodium-dev:amd64. 2021-10-01T23:05:11.2071461Z (Reading database ... 2021-10-01T23:05:11.2072330Z (Reading database ... 5% 2021-10-01T23:05:11.2072964Z (Reading database ... 10% 2021-10-01T23:05:11.2073510Z (Reading database ... 15% 2021-10-01T23:05:11.2074060Z (Reading database ... 20% 2021-10-01T23:05:11.2074595Z (Reading database ... 25% 2021-10-01T23:05:11.2075139Z (Reading database ... 30% 2021-10-01T23:05:11.2075688Z (Reading database ... 35% 2021-10-01T23:05:11.2076245Z (Reading database ... 40% 2021-10-01T23:05:11.2076789Z (Reading database ... 45% 2021-10-01T23:05:11.2077331Z (Reading database ... 50% 2021-10-01T23:05:11.2141354Z (Reading database ... 55% 2021-10-01T23:05:11.2167927Z (Reading database ... 60% 2021-10-01T23:05:11.2214699Z (Reading database ... 65% 2021-10-01T23:05:11.2329271Z (Reading database ... 70% 2021-10-01T23:05:11.2414324Z (Reading database ... 75% 2021-10-01T23:05:11.2937164Z (Reading database ... 80% 2021-10-01T23:05:11.3228688Z (Reading database ... 85% 2021-10-01T23:05:11.3410757Z (Reading database ... 90% 2021-10-01T23:05:11.3483386Z (Reading database ... 95% 2021-10-01T23:05:11.3484067Z (Reading database ... 100% 2021-10-01T23:05:11.3484905Z (Reading database ... 271691 files and directories currently installed.) 2021-10-01T23:05:11.3610388Z Preparing to unpack .../libsodium-dev_1.0.18-1_amd64.deb ... 2021-10-01T23:05:11.3633959Z Unpacking libsodium-dev:amd64 (1.0.18-1) ... 2021-10-01T23:05:11.4643959Z Setting up libsodium-dev:amd64 (1.0.18-1) ... 2021-10-01T23:05:14.2195287Z Reading package lists... 2021-10-01T23:05:14.2205489Z Building dependency tree... 2021-10-01T23:05:14.2206583Z Reading state information... 2021-10-01T23:05:14.2207518Z The following additional packages will be installed: 2021-10-01T23:05:14.2209479Z libarchive-dev liblept5 libtesseract4 tesseract-ocr tesseract-ocr-osd 2021-10-01T23:05:14.2210669Z The following NEW packages will be installed: 2021-10-01T23:05:14.2212158Z libarchive-dev liblept5 libleptonica-dev libtesseract-dev libtesseract4 2021-10-01T23:05:14.2213677Z tesseract-ocr tesseract-ocr-eng tesseract-ocr-osd 2021-10-01T23:05:14.2214829Z 0 upgraded, 8 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:05:14.2215695Z Need to get 10.4 MB of archives. 2021-10-01T23:05:14.2216647Z After this operation, 38.0 MB of additional disk space will be used. 2021-10-01T23:05:14.2218860Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-dev amd64 3.4.0-2ubuntu1 [490 kB] 2021-10-01T23:05:14.2220824Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblept5 amd64 1.79.0-1 [999 kB] 2021-10-01T23:05:14.2222875Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libleptonica-dev amd64 1.79.0-1 [1389 kB] 2021-10-01T23:05:14.2224964Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract4 amd64 4.1.1-2build2 [1237 kB] 2021-10-01T23:05:14.2227096Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract-dev amd64 4.1.1-2build2 [1463 kB] 2021-10-01T23:05:14.2229294Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-eng all 1:4.00~git30-7274cfa-1 [1598 kB] 2021-10-01T23:05:14.2231581Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-osd all 1:4.00~git30-7274cfa-1 [2990 kB] 2021-10-01T23:05:14.2233717Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr amd64 4.1.1-2build2 [262 kB] 2021-10-01T23:05:14.6507678Z Fetched 10.4 MB in 0s (55.0 MB/s) 2021-10-01T23:05:14.6867485Z Selecting previously unselected package libarchive-dev:amd64. 2021-10-01T23:05:14.6955091Z (Reading database ... 2021-10-01T23:05:14.6955925Z (Reading database ... 5% 2021-10-01T23:05:14.6956515Z (Reading database ... 10% 2021-10-01T23:05:14.6957297Z (Reading database ... 15% 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and directories currently installed.) 2021-10-01T23:05:14.8451808Z Preparing to unpack .../0-libarchive-dev_3.4.0-2ubuntu1_amd64.deb ... 2021-10-01T23:05:14.8464388Z Unpacking libarchive-dev:amd64 (3.4.0-2ubuntu1) ... 2021-10-01T23:05:14.9341860Z Selecting previously unselected package liblept5:amd64. 2021-10-01T23:05:14.9606901Z Preparing to unpack .../1-liblept5_1.79.0-1_amd64.deb ... 2021-10-01T23:05:14.9627592Z Unpacking liblept5:amd64 (1.79.0-1) ... 2021-10-01T23:05:15.0930954Z Selecting previously unselected package libleptonica-dev:amd64. 2021-10-01T23:05:15.1221496Z Preparing to unpack .../2-libleptonica-dev_1.79.0-1_amd64.deb ... 2021-10-01T23:05:15.1235215Z Unpacking libleptonica-dev:amd64 (1.79.0-1) ... 2021-10-01T23:05:15.2900722Z Selecting previously unselected package libtesseract4:amd64. 2021-10-01T23:05:15.3198252Z Preparing to unpack .../3-libtesseract4_4.1.1-2build2_amd64.deb ... 2021-10-01T23:05:15.3212742Z Unpacking libtesseract4:amd64 (4.1.1-2build2) ... 2021-10-01T23:05:15.4820766Z Selecting previously unselected package libtesseract-dev:amd64. 2021-10-01T23:05:15.5123147Z Preparing to unpack .../4-libtesseract-dev_4.1.1-2build2_amd64.deb ... 2021-10-01T23:05:15.5136822Z Unpacking libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-10-01T23:05:15.7098065Z Selecting previously unselected package tesseract-ocr-eng. 2021-10-01T23:05:15.7415305Z Preparing to unpack .../5-tesseract-ocr-eng_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-10-01T23:05:15.7429962Z Unpacking tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-10-01T23:05:15.9352676Z Selecting previously unselected package tesseract-ocr-osd. 2021-10-01T23:05:15.9673970Z Preparing to unpack .../6-tesseract-ocr-osd_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-10-01T23:05:15.9686131Z Unpacking tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-10-01T23:05:16.3782066Z Selecting previously unselected package tesseract-ocr. 2021-10-01T23:05:16.4060447Z Preparing to unpack .../7-tesseract-ocr_4.1.1-2build2_amd64.deb ... 2021-10-01T23:05:16.4072212Z Unpacking tesseract-ocr (4.1.1-2build2) ... 2021-10-01T23:05:16.5132259Z Setting up tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-10-01T23:05:16.5174764Z Setting up liblept5:amd64 (1.79.0-1) ... 2021-10-01T23:05:16.5214936Z Setting up libleptonica-dev:amd64 (1.79.0-1) ... 2021-10-01T23:05:16.5250587Z Setting up libtesseract4:amd64 (4.1.1-2build2) ... 2021-10-01T23:05:16.5292922Z Setting up libarchive-dev:amd64 (3.4.0-2ubuntu1) ... 2021-10-01T23:05:16.5326990Z Setting up tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-10-01T23:05:16.5360384Z Setting up libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-10-01T23:05:16.5396804Z Setting up tesseract-ocr (4.1.1-2build2) ... 2021-10-01T23:05:16.5438723Z Processing triggers for man-db (2.9.1-1) ... 2021-10-01T23:05:24.0608850Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:05:26.1647978Z Reading package lists... 2021-10-01T23:05:26.3678448Z Building dependency tree... 2021-10-01T23:05:26.3700797Z Reading state information... 2021-10-01T23:05:26.5547054Z wget is already the newest version (1.20.3-1ubuntu1). 2021-10-01T23:05:26.6449622Z 0 upgraded, 0 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:05:26.7946467Z Reading package lists... 2021-10-01T23:05:26.9990994Z Building dependency tree... 2021-10-01T23:05:27.0013109Z Reading state information... 2021-10-01T23:05:27.1796811Z The following additional packages will be installed: 2021-10-01T23:05:27.1801695Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-10-01T23:05:27.1804070Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev 2021-10-01T23:05:27.1808075Z Suggested packages: 2021-10-01T23:05:27.1809626Z doc-base krb5-doc krb5-user libnorm-doc 2021-10-01T23:05:27.2587729Z The following NEW packages will be installed: 2021-10-01T23:05:27.2595600Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-10-01T23:05:27.2602118Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev libzmq3-dev 2021-10-01T23:05:27.3011379Z 0 upgraded, 10 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:05:27.3658414Z Need to get 1459 kB of archives. 2021-10-01T23:05:27.3659810Z After this operation, 7754 kB of additional disk space will be used. 2021-10-01T23:05:27.3662210Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgssrpc4 amd64 1.17-6ubuntu4.1 [55.4 kB] 2021-10-01T23:05:27.3716068Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkdb5-9 amd64 1.17-6ubuntu4.1 [37.3 kB] 2021-10-01T23:05:27.3729704Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5srv-mit11 amd64 1.17-6ubuntu4.1 [49.5 kB] 2021-10-01T23:05:27.3750357Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5clnt-mit11 amd64 1.17-6ubuntu4.1 [37.6 kB] 2021-10-01T23:05:27.3762379Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 comerr-dev amd64 2.1-1.45.5-2ubuntu1 [39.9 kB] 2021-10-01T23:05:27.3786460Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 krb5-multidev amd64 1.17-6ubuntu4.1 [120 kB] 2021-10-01T23:05:27.3828126Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnorm-dev amd64 1.5.8+dfsg2-2build1 [463 kB] 2021-10-01T23:05:27.3952175Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpgm-dev amd64 5.2.122~dfsg-3ubuntu1 [189 kB] 2021-10-01T23:05:27.3997703Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkrb5-dev amd64 1.17-6ubuntu4.1 [11.7 kB] 2021-10-01T23:05:27.4004586Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzmq3-dev amd64 4.3.2-2ubuntu1 [455 kB] 2021-10-01T23:05:27.9149885Z Fetched 1459 kB in 0s (20.2 MB/s) 2021-10-01T23:05:27.9545181Z Selecting previously unselected package libgssrpc4:amd64. 2021-10-01T23:05:27.9635898Z (Reading database ... 2021-10-01T23:05:27.9636993Z (Reading database ... 5% 2021-10-01T23:05:27.9637772Z (Reading database ... 10% 2021-10-01T23:05:27.9638533Z (Reading database ... 15% 2021-10-01T23:05:27.9639273Z (Reading database ... 20% 2021-10-01T23:05:27.9640801Z (Reading database ... 25% 2021-10-01T23:05:27.9641634Z (Reading database ... 30% 2021-10-01T23:05:27.9642463Z (Reading database ... 35% 2021-10-01T23:05:27.9643214Z (Reading database ... 40% 2021-10-01T23:05:27.9643964Z (Reading database ... 45% 2021-10-01T23:05:27.9644702Z (Reading database ... 50% 2021-10-01T23:05:27.9686001Z (Reading database ... 55% 2021-10-01T23:05:27.9726998Z (Reading database ... 60% 2021-10-01T23:05:27.9769694Z (Reading database ... 65% 2021-10-01T23:05:27.9812535Z (Reading database ... 70% 2021-10-01T23:05:27.9972570Z (Reading database ... 75% 2021-10-01T23:05:28.0501470Z (Reading database ... 80% 2021-10-01T23:05:28.0598981Z (Reading database ... 85% 2021-10-01T23:05:28.0977335Z (Reading database ... 90% 2021-10-01T23:05:28.1059617Z (Reading database ... 95% 2021-10-01T23:05:28.1060244Z (Reading database ... 100% 2021-10-01T23:05:28.1061103Z (Reading database ... 271986 files and directories currently installed.) 2021-10-01T23:05:28.1201454Z Preparing to unpack .../0-libgssrpc4_1.17-6ubuntu4.1_amd64.deb ... 2021-10-01T23:05:28.1236535Z Unpacking libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-10-01T23:05:28.1580283Z Selecting previously unselected package libkdb5-9:amd64. 2021-10-01T23:05:28.1920107Z Preparing to unpack .../1-libkdb5-9_1.17-6ubuntu4.1_amd64.deb ... 2021-10-01T23:05:28.1942578Z Unpacking libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-10-01T23:05:28.2382443Z Selecting previously unselected package libkadm5srv-mit11:amd64. 2021-10-01T23:05:28.2655492Z Preparing to unpack .../2-libkadm5srv-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-10-01T23:05:28.2668895Z Unpacking libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-10-01T23:05:28.3020594Z Selecting previously unselected package libkadm5clnt-mit11:amd64. 2021-10-01T23:05:28.3334679Z Preparing to unpack .../3-libkadm5clnt-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-10-01T23:05:28.3351028Z Unpacking libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-10-01T23:05:28.3700627Z Selecting previously unselected package comerr-dev:amd64. 2021-10-01T23:05:28.3975894Z Preparing to unpack .../4-comerr-dev_2.1-1.45.5-2ubuntu1_amd64.deb ... 2021-10-01T23:05:28.4028705Z Unpacking comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-10-01T23:05:28.4421483Z Selecting previously unselected package krb5-multidev:amd64. 2021-10-01T23:05:28.4721262Z Preparing to unpack .../5-krb5-multidev_1.17-6ubuntu4.1_amd64.deb ... 2021-10-01T23:05:28.4736140Z Unpacking krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-10-01T23:05:28.5180419Z Selecting previously unselected package libnorm-dev:amd64. 2021-10-01T23:05:28.5471985Z Preparing to unpack .../6-libnorm-dev_1.5.8+dfsg2-2build1_amd64.deb ... 2021-10-01T23:05:28.5483674Z Unpacking libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-10-01T23:05:28.6300369Z Selecting previously unselected package libpgm-dev:amd64. 2021-10-01T23:05:28.6598874Z Preparing to unpack .../7-libpgm-dev_5.2.122~dfsg-3ubuntu1_amd64.deb ... 2021-10-01T23:05:28.6612987Z Unpacking libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-10-01T23:05:28.7180330Z Selecting previously unselected package libkrb5-dev:amd64. 2021-10-01T23:05:28.7483091Z Preparing to unpack .../8-libkrb5-dev_1.17-6ubuntu4.1_amd64.deb ... 2021-10-01T23:05:28.7494084Z Unpacking libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-10-01T23:05:28.7860111Z Selecting previously unselected package libzmq3-dev:amd64. 2021-10-01T23:05:28.8121714Z Preparing to unpack .../9-libzmq3-dev_4.3.2-2ubuntu1_amd64.deb ... 2021-10-01T23:05:28.8138153Z Unpacking libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-10-01T23:05:28.9409592Z Setting up libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-10-01T23:05:28.9447485Z Setting up libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-10-01T23:05:28.9494094Z Setting up libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-10-01T23:05:28.9526083Z Setting up comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-10-01T23:05:28.9576202Z Setting up libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-10-01T23:05:28.9611274Z Setting up libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-10-01T23:05:28.9645204Z Setting up libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-10-01T23:05:28.9678232Z Setting up krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-10-01T23:05:28.9709865Z Setting up libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-10-01T23:05:28.9731987Z Setting up libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-10-01T23:05:28.9767889Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:05:29.0009901Z Processing triggers for man-db (2.9.1-1) ... 2021-10-01T23:05:37.2243238Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-10-01T23:05:39.0464304Z Reading package lists... 2021-10-01T23:05:39.2400574Z Building dependency tree... 2021-10-01T23:05:39.2422738Z Reading state information... 2021-10-01T23:05:39.3852324Z E: Unable to locate package udunits 2021-10-01T23:05:39.4566180Z Reading package lists... 2021-10-01T23:05:39.6522076Z Building dependency tree... 2021-10-01T23:05:39.6543773Z Reading state information... 2021-10-01T23:05:39.8275339Z The following additional packages will be installed: 2021-10-01T23:05:39.8276092Z libwebpdemux2 2021-10-01T23:05:39.8874278Z The following NEW packages will be installed: 2021-10-01T23:05:39.8876580Z libwebp-dev libwebpdemux2 2021-10-01T23:05:39.9259554Z 0 upgraded, 2 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:05:39.9788127Z Need to get 276 kB of archives. 2021-10-01T23:05:39.9789090Z After this operation, 980 kB of additional disk space will be used. 2021-10-01T23:05:39.9791306Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwebpdemux2 amd64 0.6.1-2ubuntu0.20.04.1 [9576 B] 2021-10-01T23:05:39.9821879Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwebp-dev amd64 0.6.1-2ubuntu0.20.04.1 [266 kB] 2021-10-01T23:05:40.4795820Z Fetched 276 kB in 0s (8445 kB/s) 2021-10-01T23:05:40.5195594Z Selecting previously unselected package libwebpdemux2:amd64. 2021-10-01T23:05:40.5282840Z (Reading database ... 2021-10-01T23:05:40.5283492Z (Reading database ... 5% 2021-10-01T23:05:40.5284066Z (Reading database ... 10% 2021-10-01T23:05:40.5285143Z (Reading database ... 15% 2021-10-01T23:05:40.5287333Z (Reading database ... 20% 2021-10-01T23:05:40.5287897Z (Reading database ... 25% 2021-10-01T23:05:40.5290237Z (Reading database ... 30% 2021-10-01T23:05:40.5290813Z (Reading database ... 35% 2021-10-01T23:05:40.5293351Z (Reading database ... 40% 2021-10-01T23:05:40.5294188Z (Reading database ... 45% 2021-10-01T23:05:40.5294939Z (Reading database ... 50% 2021-10-01T23:05:40.5344462Z (Reading database ... 55% 2021-10-01T23:05:40.5381615Z (Reading database ... 60% 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(0.6.1-2ubuntu0.20.04.1) ... 2021-10-01T23:05:40.8365245Z Setting up libwebpdemux2:amd64 (0.6.1-2ubuntu0.20.04.1) ... 2021-10-01T23:05:40.8396190Z Setting up libwebp-dev:amd64 (0.6.1-2ubuntu0.20.04.1) ... 2021-10-01T23:05:40.8430482Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:05:42.8342010Z Reading package lists... 2021-10-01T23:05:43.0209370Z Building dependency tree... 2021-10-01T23:05:43.0230802Z Reading state information... 2021-10-01T23:05:43.1982383Z The following additional packages will be installed: 2021-10-01T23:05:43.1985250Z gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-10-01T23:05:43.1986788Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.51 2021-10-01T23:05:43.1988098Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-10-01T23:05:43.1992383Z Suggested packages: 2021-10-01T23:05:43.1993343Z cargo-doc gdb-doc gdbserver rust-doc rust-src 2021-10-01T23:05:43.2705532Z The following NEW packages will be installed: 2021-10-01T23:05:43.2716552Z cargo gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-10-01T23:05:43.2718171Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.51 2021-10-01T23:05:43.2728139Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-10-01T23:05:43.3118105Z 0 upgraded, 13 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:05:43.3730914Z Need to get 89.5 MB of archives. 2021-10-01T23:05:43.3732171Z After this operation, 451 MB of additional disk space will be used. 2021-10-01T23:05:43.3734744Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libbabeltrace1 amd64 1.5.8-1build1 [156 kB] 2021-10-01T23:05:43.3823784Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libipt2 amd64 2.0.1-1 [42.8 kB] 2021-10-01T23:05:43.3839714Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight-common all 3.1.8-1.2build5 [50.7 kB] 2021-10-01T23:05:43.3853727Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libboost-regex1.71.0 amd64 1.71.0-6ubuntu6 [471 kB] 2021-10-01T23:05:43.3998408Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight4v5 amd64 3.1.8-1.2build5 [232 kB] 2021-10-01T23:05:43.4045883Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxxhash0 amd64 0.7.3-1 [15.3 kB] 2021-10-01T23:05:43.4054672Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-1.51 amd64 1.51.0+dfsg1+llvm-1~exp3ubuntu1~20.04.2 [36.7 MB] 2021-10-01T23:05:43.5183490Z Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal/main amd64 gdb amd64 10.2-0ubuntu1~20.04~1 [3282 kB] 2021-10-01T23:05:43.9097405Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-dev amd64 1.51.0+dfsg1+llvm-1~exp3ubuntu1~20.04.2 [32.5 MB] 2021-10-01T23:05:44.3410882Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rustc amd64 1.51.0+dfsg1+llvm-1~exp3ubuntu1~20.04.2 [2233 kB] 2021-10-01T23:05:44.3686653Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 cargo amd64 0.52.0-0ubuntu1~20.04.1 [3258 kB] 2021-10-01T23:05:44.4184925Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libc6-dbg amd64 2.31-0ubuntu9.2 [10.5 MB] 2021-10-01T23:05:44.5341125Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rust-gdb all 1.51.0+dfsg1+llvm-1~exp3ubuntu1~20.04.2 [28.6 kB] 2021-10-01T23:05:45.0301584Z Fetched 89.5 MB in 1s (75.2 MB/s) 2021-10-01T23:05:45.0705536Z Selecting previously unselected package libbabeltrace1:amd64. 2021-10-01T23:05:45.0797779Z (Reading database ... 2021-10-01T23:05:45.0798427Z (Reading database ... 5% 2021-10-01T23:05:45.0799029Z (Reading database ... 10% 2021-10-01T23:05:45.0799583Z (Reading database ... 15% 2021-10-01T23:05:45.0800119Z (Reading database ... 20% 2021-10-01T23:05:45.0800669Z (Reading database ... 25% 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.../00-libbabeltrace1_1.5.8-1build1_amd64.deb ... 2021-10-01T23:05:45.2362778Z Unpacking libbabeltrace1:amd64 (1.5.8-1build1) ... 2021-10-01T23:05:45.2819295Z Selecting previously unselected package libipt2. 2021-10-01T23:05:45.3106696Z Preparing to unpack .../01-libipt2_2.0.1-1_amd64.deb ... 2021-10-01T23:05:45.3125197Z Unpacking libipt2 (2.0.1-1) ... 2021-10-01T23:05:45.3541445Z Selecting previously unselected package libsource-highlight-common. 2021-10-01T23:05:45.3805898Z Preparing to unpack .../02-libsource-highlight-common_3.1.8-1.2build5_all.deb ... 2021-10-01T23:05:45.3821735Z Unpacking libsource-highlight-common (3.1.8-1.2build5) ... 2021-10-01T23:05:45.4340826Z Selecting previously unselected package libboost-regex1.71.0:amd64. 2021-10-01T23:05:45.4638236Z Preparing to unpack .../03-libboost-regex1.71.0_1.71.0-6ubuntu6_amd64.deb ... 2021-10-01T23:05:45.4648362Z Unpacking libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-10-01T23:05:45.5500660Z Selecting previously unselected package libsource-highlight4v5. 2021-10-01T23:05:45.5778858Z Preparing to unpack .../04-libsource-highlight4v5_3.1.8-1.2build5_amd64.deb ... 2021-10-01T23:05:45.5795509Z Unpacking libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-10-01T23:05:45.6379483Z Selecting previously unselected package libxxhash0:amd64. 2021-10-01T23:05:45.6748558Z Preparing to unpack .../05-libxxhash0_0.7.3-1_amd64.deb ... 2021-10-01T23:05:45.6762295Z Unpacking libxxhash0:amd64 (0.7.3-1) ... 2021-10-01T23:05:45.7061448Z Selecting previously unselected package gdb. 2021-10-01T23:05:45.7341217Z Preparing to unpack .../06-gdb_10.2-0ubuntu1~20.04~1_amd64.deb ... 2021-10-01T23:05:45.7354428Z Unpacking gdb (10.2-0ubuntu1~20.04~1) ... 2021-10-01T23:05:46.1101457Z Selecting previously unselected package libstd-rust-1.51:amd64. 2021-10-01T23:05:46.1378375Z Preparing to unpack .../07-libstd-rust-1.51_1.51.0+dfsg1+llvm-1~exp3ubuntu1~20.04.2_amd64.deb ... 2021-10-01T23:05:46.1395607Z Unpacking libstd-rust-1.51:amd64 (1.51.0+dfsg1+llvm-1~exp3ubuntu1~20.04.2) ... 2021-10-01T23:05:50.4256395Z Selecting previously unselected package libstd-rust-dev:amd64. 2021-10-01T23:05:50.4528248Z Preparing to unpack .../08-libstd-rust-dev_1.51.0+dfsg1+llvm-1~exp3ubuntu1~20.04.2_amd64.deb ... 2021-10-01T23:05:50.4543761Z Unpacking libstd-rust-dev:amd64 (1.51.0+dfsg1+llvm-1~exp3ubuntu1~20.04.2) ... 2021-10-01T23:05:54.3620344Z Selecting previously unselected package rustc. 2021-10-01T23:05:54.3947935Z Preparing to unpack .../09-rustc_1.51.0+dfsg1+llvm-1~exp3ubuntu1~20.04.2_amd64.deb ... 2021-10-01T23:05:54.3965916Z Unpacking rustc (1.51.0+dfsg1+llvm-1~exp3ubuntu1~20.04.2) ... 2021-10-01T23:05:54.6596279Z Selecting previously unselected package cargo. 2021-10-01T23:05:54.6895085Z Preparing to unpack .../10-cargo_0.52.0-0ubuntu1~20.04.1_amd64.deb ... 2021-10-01T23:05:54.6907142Z Unpacking cargo (0.52.0-0ubuntu1~20.04.1) ... 2021-10-01T23:05:55.0741484Z Selecting previously unselected package libc6-dbg:amd64. 2021-10-01T23:05:55.1077479Z Preparing to unpack .../11-libc6-dbg_2.31-0ubuntu9.2_amd64.deb ... 2021-10-01T23:05:55.1090389Z Unpacking libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-10-01T23:05:56.4135645Z Selecting previously unselected package rust-gdb. 2021-10-01T23:05:56.4444242Z Preparing to unpack .../12-rust-gdb_1.51.0+dfsg1+llvm-1~exp3ubuntu1~20.04.2_all.deb ... 2021-10-01T23:05:56.4458245Z Unpacking rust-gdb (1.51.0+dfsg1+llvm-1~exp3ubuntu1~20.04.2) ... 2021-10-01T23:05:56.5188909Z Setting up libstd-rust-1.51:amd64 (1.51.0+dfsg1+llvm-1~exp3ubuntu1~20.04.2) ... 2021-10-01T23:05:56.5236666Z Setting up libsource-highlight-common (3.1.8-1.2build5) ... 2021-10-01T23:05:56.5273879Z Setting up libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-10-01T23:05:56.5313114Z Setting up libstd-rust-dev:amd64 (1.51.0+dfsg1+llvm-1~exp3ubuntu1~20.04.2) ... 2021-10-01T23:05:56.5356926Z Setting up libipt2 (2.0.1-1) ... 2021-10-01T23:05:56.5386383Z Setting up libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-10-01T23:05:56.5414487Z Setting up libbabeltrace1:amd64 (1.5.8-1build1) ... 2021-10-01T23:05:56.5444676Z Setting up rustc (1.51.0+dfsg1+llvm-1~exp3ubuntu1~20.04.2) ... 2021-10-01T23:05:56.5472985Z Setting up libxxhash0:amd64 (0.7.3-1) ... 2021-10-01T23:05:56.5502678Z Setting up libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-10-01T23:05:56.5540319Z Setting up cargo (0.52.0-0ubuntu1~20.04.1) ... 2021-10-01T23:05:56.5568886Z Setting up gdb (10.2-0ubuntu1~20.04~1) ... 2021-10-01T23:05:56.5611195Z Setting up rust-gdb (1.51.0+dfsg1+llvm-1~exp3ubuntu1~20.04.2) ... 2021-10-01T23:05:56.5649114Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:05:56.5894555Z Processing triggers for man-db (2.9.1-1) ... 2021-10-01T23:06:03.3055440Z Reading package lists... 2021-10-01T23:06:03.4918720Z Building dependency tree... 2021-10-01T23:06:03.4940316Z Reading state information... 2021-10-01T23:06:03.6755234Z The following additional packages will be installed: 2021-10-01T23:06:03.6757776Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-10-01T23:06:03.6759560Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-10-01T23:06:03.6761324Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-10-01T23:06:03.6762963Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-10-01T23:06:03.6764664Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-10-01T23:06:03.6766348Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-10-01T23:06:03.6767870Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-10-01T23:06:03.6769701Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-10-01T23:06:03.6771379Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-10-01T23:06:03.6772965Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-10-01T23:06:03.6774693Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-10-01T23:06:03.6776355Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-10-01T23:06:03.6778360Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-10-01T23:06:03.6781513Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-10-01T23:06:03.6783194Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-10-01T23:06:03.6784792Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-10-01T23:06:03.6786296Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-10-01T23:06:03.6787801Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-10-01T23:06:03.6789396Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-10-01T23:06:03.6790679Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-10-01T23:06:03.6791911Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-10-01T23:06:03.6793232Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-10-01T23:06:03.6794493Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-10-01T23:06:03.6795677Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-10-01T23:06:03.6796886Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-10-01T23:06:03.6798351Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-10-01T23:06:03.6799801Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-10-01T23:06:03.6801299Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-10-01T23:06:03.6802811Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-10-01T23:06:03.6804206Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-10-01T23:06:03.6805544Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-10-01T23:06:03.6806849Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-10-01T23:06:03.6808249Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-10-01T23:06:03.6809707Z python3-cycler python3-dateutil python3-decorator python3-future 2021-10-01T23:06:03.6811268Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-10-01T23:06:03.6813249Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-10-01T23:06:03.6814726Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-10-01T23:06:03.6816740Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-10-01T23:06:03.6819323Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-10-01T23:06:03.6820906Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-10-01T23:06:03.6822438Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-10-01T23:06:03.6823820Z python3-webencodings qdoc-qt5 qgis-common qgis-plugin-grass 2021-10-01T23:06:03.6825232Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-10-01T23:06:03.6826873Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-10-01T23:06:03.6828565Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-10-01T23:06:03.6830084Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-10-01T23:06:03.6831552Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-10-01T23:06:03.6833114Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-10-01T23:06:03.6834477Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-10-01T23:06:03.6835272Z Suggested packages: 2021-10-01T23:06:03.6836407Z avahi-autoipd blt-demo libgdal-grass grass-dev grass-gui e00compr avce00 2021-10-01T23:06:03.6837777Z gnuplot gpsbabel gpstrans netpbm python3-rpy2 python3-termcolor grass 2021-10-01T23:06:03.6839250Z grass-dev-doc gvfs exiv2 geotiff-bin libgeotiff-epsg libvisual-0.4-plugins 2021-10-01T23:06:03.6840756Z libhdf4-doc libhdf4-alt-dev hdf4-tools libjs-jquery-ui-docs avahi-autoipd 2021-10-01T23:06:03.6842080Z | zeroconf ogdi-bin pcscd libqscintilla2-doc qtwayland5 2021-10-01T23:06:03.6843493Z qt5-qmltooling-plugins pinentry-doc python-cycler-doc python-future-doc 2021-10-01T23:06:03.6844983Z python3-genshi python3-lxml-dbg python-lxml-doc dvipng gir1.2-gtk-3.0 2021-10-01T23:06:03.6846497Z inkscape ipython3 python-matplotlib-doc python3-cairocffi python3-gi-cairo 2021-10-01T23:06:03.6847954Z python3-gobject python3-nose python3-scipy python3-tornado 2021-10-01T23:06:03.6849422Z texlive-extra-utils texlive-latex-extra ttf-staypuft python-numpy-doc 2021-10-01T23:06:03.6851030Z python3-pytest python3-numpy-dbg owslib-doc python-pil-doc python3-pil-dbg 2021-10-01T23:06:03.6852687Z python3-pandas python3-ipykernel python-psycopg2-doc python-pyparsing-doc 2021-10-01T23:06:03.6854890Z python3-pyqt5-dbg otb-qgis saga tix python3-tk-dbg qt5-doc comgt wvdial 2021-10-01T23:06:03.6856007Z wpagui libengine-pkcs11-openssl 2021-10-01T23:06:03.7895692Z The following NEW packages will be installed: 2021-10-01T23:06:03.7902241Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-10-01T23:06:03.7904127Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-10-01T23:06:03.7905893Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-10-01T23:06:03.7907633Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-10-01T23:06:03.7909386Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-10-01T23:06:03.7911065Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-10-01T23:06:03.7912611Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-10-01T23:06:03.7914381Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-10-01T23:06:03.7916156Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-10-01T23:06:03.7917859Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-10-01T23:06:03.7919955Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-10-01T23:06:03.7921943Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-10-01T23:06:03.7924006Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-10-01T23:06:03.7927955Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-10-01T23:06:03.7930180Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-10-01T23:06:03.7932423Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-10-01T23:06:03.7934433Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-10-01T23:06:03.7936486Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-10-01T23:06:03.7938695Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-10-01T23:06:03.7942042Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-10-01T23:06:03.7946699Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-10-01T23:06:03.7948302Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-10-01T23:06:03.7949782Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-10-01T23:06:03.7951223Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-10-01T23:06:03.7952668Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-10-01T23:06:03.7954475Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-10-01T23:06:03.7956238Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-10-01T23:06:03.7958033Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-10-01T23:06:03.7959831Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-10-01T23:06:03.7961513Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-10-01T23:06:03.7963102Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-10-01T23:06:03.7964663Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-10-01T23:06:03.7966342Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-10-01T23:06:03.7968084Z python3-cycler python3-dateutil python3-decorator python3-future 2021-10-01T23:06:03.7969939Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-10-01T23:06:03.7971802Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-10-01T23:06:03.7973556Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-10-01T23:06:03.7976340Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-10-01T23:06:03.7978581Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-10-01T23:06:03.7980407Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-10-01T23:06:03.7982200Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-10-01T23:06:03.7983881Z python3-webencodings qdoc-qt5 qgis qgis-common qgis-plugin-grass 2021-10-01T23:06:03.7985570Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-10-01T23:06:03.7987511Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-10-01T23:06:03.7989554Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-10-01T23:06:03.7991255Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-10-01T23:06:03.7992679Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-10-01T23:06:03.7994247Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-10-01T23:06:03.7995589Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-10-01T23:06:03.8338372Z 0 upgraded, 214 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:06:03.8953351Z Need to get 183 MB of archives. 2021-10-01T23:06:03.8955027Z After this operation, 777 MB of additional disk space will be used. 2021-10-01T23:06:03.8957355Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdouble-conversion3 amd64 3.1.5-4ubuntu1 [37.9 kB] 2021-10-01T23:06:03.9004006Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5core5a amd64 5.12.8+dfsg-0ubuntu1 [2005 kB] 2021-10-01T23:06:03.9576222Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl-mesa0 amd64 21.0.3-0ubuntu0.3~20.04.2 [96.4 kB] 2021-10-01T23:06:03.9591129Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl1 amd64 1.3.2-1~ubuntu0.20.04.1 [31.9 kB] 2021-10-01T23:06:03.9597723Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libevdev2 amd64 1.9.0+dfsg-1ubuntu0.1 [31.6 kB] 2021-10-01T23:06:03.9605158Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmtdev1 amd64 1.1.5-1.1 [14.2 kB] 2021-10-01T23:06:03.9612741Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-common all 1.3-2ubuntu3 [45.3 kB] 2021-10-01T23:06:03.9622316Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom2 amd64 1.3-2ubuntu3 [20.0 kB] 2021-10-01T23:06:03.9628679Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput-bin amd64 1.15.5-1ubuntu0.2 [19.1 kB] 2021-10-01T23:06:03.9635612Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput10 amd64 1.15.5-1ubuntu0.2 [112 kB] 2021-10-01T23:06:03.9650366Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5dbus5 amd64 5.12.8+dfsg-0ubuntu1 [208 kB] 2021-10-01T23:06:03.9672114Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5network5 amd64 5.12.8+dfsg-0ubuntu1 [674 kB] 2021-10-01T23:06:03.9736749Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [10.8 kB] 2021-10-01T23:06:03.9740108Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-util1 amd64 0.4.0-0ubuntu3 [11.2 kB] 2021-10-01T23:06:03.9742292Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-image0 amd64 0.4.0-1build1 [12.3 kB] 2021-10-01T23:06:03.9747808Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-keysyms1 amd64 0.4.0-1build1 [8452 B] 2021-10-01T23:06:03.9752299Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-randr0 amd64 1.14-2 [16.3 kB] 2021-10-01T23:06:03.9758587Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-render-util0 amd64 0.3.9-1build1 [9912 B] 2021-10-01T23:06:03.9763353Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinerama0 amd64 1.14-2 [5260 B] 2021-10-01T23:06:03.9769651Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinput0 amd64 1.14-2 [29.3 kB] 2021-10-01T23:06:03.9775076Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xkb1 amd64 1.14-2 [29.6 kB] 2021-10-01T23:06:03.9783262Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxkbcommon-x11-0 amd64 0.10.0-1 [13.4 kB] 2021-10-01T23:06:03.9789844Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5gui5 amd64 5.12.8+dfsg-0ubuntu1 [2971 kB] 2021-10-01T23:06:04.0052255Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5widgets5 amd64 5.12.8+dfsg-0ubuntu1 [2293 kB] 2021-10-01T23:06:04.0268994Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5svg5 amd64 5.12.8-0ubuntu1 [131 kB] 2021-10-01T23:06:04.0284549Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liborc-0.4-0 amd64 1:0.4.31-1 [188 kB] 2021-10-01T23:06:04.0303108Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgstreamer-plugins-base1.0-0 amd64 1.16.2-4ubuntu0.1 [735 kB] 2021-10-01T23:06:04.0390827Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhyphen0 amd64 2.8.8-7 [27.0 kB] 2021-10-01T23:06:04.0398750Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5positioning5 amd64 5.12.8+dfsg-0ubuntu1 [197 kB] 2021-10-01T23:06:04.0417526Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5printsupport5 amd64 5.12.8+dfsg-0ubuntu1 [193 kB] 2021-10-01T23:06:04.0438190Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5qml5 amd64 5.12.8-0ubuntu1 [1438 kB] 2021-10-01T23:06:04.0581089Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quick5 amd64 5.12.8-0ubuntu1 [1335 kB] 2021-10-01T23:06:04.0703700Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sensors5 amd64 5.12.8-0ubuntu1 [114 kB] 2021-10-01T23:06:04.0719835Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webchannel5 amd64 5.12.8-0ubuntu1 [51.2 kB] 2021-10-01T23:06:04.0727576Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwoff1 amd64 1.0.2-1build2 [42.0 kB] 2021-10-01T23:06:04.0735778Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webkit5 amd64 5.212.0~alpha4-1ubuntu2 [12.1 MB] 2021-10-01T23:06:04.1826123Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-image-formats-plugins amd64 5.12.8-0ubuntu1 [43.4 kB] 2021-10-01T23:06:04.1834345Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers-common all 3.10.4+dfsg-1ubuntu2 [897 kB] 2021-10-01T23:06:04.1916188Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2 amd64 2.2.1-2build1 [307 kB] 2021-10-01T23:06:04.1944750Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2-plugins amd64 2.2.1-2build1 [191 kB] 2021-10-01T23:06:04.1966225Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5 amd64 5.12.8+dfsg-0ubuntu1 [121 kB] 2021-10-01T23:06:04.1978181Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5-sqlite amd64 5.12.8+dfsg-0ubuntu1 [47.5 kB] 2021-10-01T23:06:04.1986645Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-data all 3.0.4+dfsg-1build3 [186 kB] 2021-10-01T23:06:04.2005082Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarpack2 amd64 3.7.0-3 [92.8 kB] 2021-10-01T23:06:04.2057047Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsuperlu5 amd64 5.2.1+dfsg1-4 [159 kB] 2021-10-01T23:06:04.2077367Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarmadillo9 amd64 1:9.800.4+dfsg-1build1 [93.2 kB] 2021-10-01T23:06:04.2088962Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcfitsio8 amd64 3.470-3 [466 kB] 2021-10-01T23:06:04.2131576Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcharls2 amd64 2.0.0+dfsg-1build1 [74.1 kB] 2021-10-01T23:06:04.2143278Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdap25 amd64 3.20.5-1 [435 kB] 2021-10-01T23:06:04.2186266Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdapclient6v5 amd64 3.20.5-1 [92.2 kB] 2021-10-01T23:06:04.2198387Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libepsilon1 amd64 0.9.2+dfsg-4 [41.0 kB] 2021-10-01T23:06:04.2204329Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfreexl1 amd64 1.0.5-3 [33.4 kB] 2021-10-01T23:06:04.2212473Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfyba0 amd64 4.1.1-6build1 [113 kB] 2021-10-01T23:06:04.2227619Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-3.8.0 amd64 3.8.0-1build1 [535 kB] 2021-10-01T23:06:04.2276655Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-c1v5 amd64 3.8.0-1build1 [69.9 kB] 2021-10-01T23:06:04.2288195Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-data all 6.3.1-1 [7647 kB] 2021-10-01T23:06:04.2972554Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libproj15 amd64 6.3.1-1 [925 kB] 2021-10-01T23:06:04.3075878Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeotiff5 amd64 1.5.1-2 [53.1 kB] 2021-10-01T23:06:04.3093636Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf4-0-alt amd64 4.2.14-1ubuntu1 [268 kB] 2021-10-01T23:06:04.3149251Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libminizip1 amd64 1.1-8build1 [20.2 kB] 2021-10-01T23:06:04.3154567Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liburiparser1 amd64 0.9.3-2 [39.3 kB] 2021-10-01T23:06:04.3163738Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlbase1 amd64 1.3.0-8build1 [45.4 kB] 2021-10-01T23:06:04.3172283Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmldom1 amd64 1.3.0-8build1 [152 kB] 2021-10-01T23:06:04.3188473Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlengine1 amd64 1.3.0-8build1 [72.5 kB] 2021-10-01T23:06:04.3197039Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnetcdf15 amd64 1:4.7.3-1 [341 kB] 2021-10-01T23:06:04.3228533Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libogdi4.1 amd64 4.1.0+ds-1build1 [198 kB] 2021-10-01T23:06:04.3248838Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqhull7 amd64 2015.2-4 [152 kB] 2021-10-01T23:06:04.3263694Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialite7 amd64 4.3.0a-6build1 [1286 kB] 2021-10-01T23:06:04.3381299Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxerces-c3.2 amd64 3.2.2+debian-1build3 [878 kB] 2021-10-01T23:06:04.3461173Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgdal26 amd64 3.0.4+dfsg-1build3 [6156 kB] 2021-10-01T23:06:04.4039530Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5concurrent5 amd64 5.12.8+dfsg-0ubuntu1 [33.5 kB] 2021-10-01T23:06:04.4045039Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5keychain1 amd64 0.10.0-1build1 [48.4 kB] 2021-10-01T23:06:04.4053848Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5serialport5 amd64 5.12.8-0ubuntu1 [33.1 kB] 2021-10-01T23:06:04.4067920Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5xml5 amd64 5.12.8+dfsg-0ubuntu1 [105 kB] 2021-10-01T23:06:04.4076434Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialindex6 amd64 1.9.3-1build1 [266 kB] 2021-10-01T23:06:04.4106862Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzip5 amd64 1.5.1-0ubuntu1 [46.7 kB] 2021-10-01T23:06:04.4114734Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-core3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [5216 kB] 2021-10-01T23:06:04.4584894Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-native3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [44.5 kB] 2021-10-01T23:06:04.4589285Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-l10n all 2.11.2+dfsg-6 [41.3 kB] 2021-10-01T23:06:04.4597939Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-15 amd64 2.11.2+dfsg-6 [1238 kB] 2021-10-01T23:06:04.4702772Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quickwidgets5 amd64 5.12.8-0ubuntu1 [39.8 kB] 2021-10-01T23:06:04.4704898Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5opengl5 amd64 5.12.8+dfsg-0ubuntu1 [136 kB] 2021-10-01T23:06:04.4724794Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqwt-qt5-6 amd64 6.1.4-1.1build1 [427 kB] 2021-10-01T23:06:04.4764535Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-gui3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3195 kB] 2021-10-01T23:06:04.5155877Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers amd64 3.10.4+dfsg-1ubuntu2 [1940 kB] 2021-10-01T23:06:04.5420768Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libavahi-core7 amd64 0.7-4ubuntu7.1 [82.0 kB] 2021-10-01T23:06:04.5435656Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdaemon0 amd64 0.14-7 [13.9 kB] 2021-10-01T23:06:04.5438832Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 avahi-daemon amd64 0.7-4ubuntu7.1 [61.0 kB] 2021-10-01T23:06:04.5445869Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4 [572 kB] 2021-10-01T23:06:04.5506129Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 blt amd64 2.5.3+dfsg-4 [4944 B] 2021-10-01T23:06:04.5508389Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 fonts-lyx all 2.3.4.2-2 [154 kB] 2021-10-01T23:06:04.5521848Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgck-1-0 amd64 3.36.0-2build1 [75.5 kB] 2021-10-01T23:06:04.5530936Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-base-3-1 amd64 3.36.0-2build1 [193 kB] 2021-10-01T23:06:04.5552373Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-ui-3-1 amd64 3.36.0-2build1 [127 kB] 2021-10-01T23:06:04.5565972Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gcr amd64 3.36.0-2build1 [63.9 kB] 2021-10-01T23:06:04.5575760Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-numpy amd64 1:1.17.4-5ubuntu3 [2725 kB] 2021-10-01T23:06:04.5812745Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-gdal amd64 3.0.4+dfsg-1build3 [527 kB] 2021-10-01T23:06:04.5862104Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-bin amd64 3.0.4+dfsg-1build3 [256 kB] 2021-10-01T23:06:04.5886938Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libavahi-glib1 amd64 0.7-4ubuntu7.1 [7792 B] 2021-10-01T23:06:04.5891874Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libmm-glib0 amd64 1.16.6-2~20.04 [188 kB] 2021-10-01T23:06:04.5915672Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 geoclue-2.0 amd64 2.5.6-0ubuntu1 [91.9 kB] 2021-10-01T23:06:04.5995438Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit-modules amd64 0.23.20-1ubuntu0.1 [231 kB] 2021-10-01T23:06:04.6138719Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit amd64 0.23.20-1ubuntu0.1 [93.8 kB] 2021-10-01T23:06:04.6170826Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 pinentry-gnome3 amd64 1.1.0-3build1 [38.6 kB] 2021-10-01T23:06:04.6184707Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring amd64 3.36.0-1ubuntu1 [613 kB] 2021-10-01T23:06:04.6354244Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring-pkcs11 amd64 3.36.0-1ubuntu1 [28.0 kB] 2021-10-01T23:06:04.6366655Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-doc all 7.8.2-1build3 [32.4 MB] 2021-10-01T23:06:05.0824958Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblaszip8 amd64 3.4.3-1build1 [125 kB] 2021-10-01T23:06:05.0840165Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-util9 amd64 2.0.1+ds-1build3 [68.5 kB] 2021-10-01T23:06:05.0849417Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-base9 amd64 2.0.1+ds-1build3 [1739 kB] 2021-10-01T23:06:05.1082748Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-core amd64 7.8.2-1build3 [5737 kB] 2021-10-01T23:06:05.2074906Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdparanoia0 amd64 3.10.2+debian-13 [46.7 kB] 2021-10-01T23:06:05.2081843Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvisual-0.4-0 amd64 0.4.0-17 [99.8 kB] 2021-10-01T23:06:05.2096418Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 gstreamer1.0-plugins-base amd64 1.16.2-4ubuntu0.1 [620 kB] 2021-10-01T23:06:05.2169101Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 iio-sensor-proxy amd64 2.8-1ubuntu1 [35.8 kB] 2021-10-01T23:06:05.2176214Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libassimp5 amd64 5.0.1~ds0-1build1 [2775 kB] 2021-10-01T23:06:05.2425443Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libexiv2-27 amd64 0.27.2-8ubuntu2.6 [791 kB] 2021-10-01T23:06:05.2512395Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi0ldbl amd64 2.4.0-10build1 [155 kB] 2021-10-01T23:06:05.2527923Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi-bin amd64 2.4.0-10build1 [10.5 kB] 2021-10-01T23:06:05.2535197Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimagequant0 amd64 2.12.2-1.1 [31.4 kB] 2021-10-01T23:06:05.2541794Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] 2021-10-01T23:06:05.2566889Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libmbim-glib4 amd64 1.24.8-1~20.04 [103 kB] 2021-10-01T23:06:05.2579223Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libmbim-proxy amd64 1.24.8-1~20.04 [5984 B] 2021-10-01T23:06:05.2583750Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-genl-3-200 amd64 3.4.0-1 [11.1 kB] 2021-10-01T23:06:05.2590200Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-route-3-200 amd64 3.4.0-1 [149 kB] 2021-10-01T23:06:05.2606874Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnss-mdns amd64 0.14.1-1ubuntu1 [22.9 kB] 2021-10-01T23:06:05.2613900Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpam-gnome-keyring amd64 3.36.0-1ubuntu1 [23.3 kB] 2021-10-01T23:06:05.2619947Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpcsclite1 amd64 1.8.26-3 [22.0 kB] 2021-10-01T23:06:05.2627091Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-faux amd64 2.0.1+ds-1build3 [27.3 kB] 2021-10-01T23:06:05.2634229Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-icebridge amd64 2.0.1+ds-1build3 [42.8 kB] 2021-10-01T23:06:05.2641541Z Get:131 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-pgpointcloud amd64 2.0.1+ds-1build3 [75.3 kB] 2021-10-01T23:06:05.2651128Z Get:132 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-python amd64 2.0.1+ds-1build3 [136 kB] 2021-10-01T23:06:05.2665319Z Get:133 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsqlite3-mod-spatialite amd64 4.3.0a-6build1 [1265 kB] 2021-10-01T23:06:05.2885861Z Get:134 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-sqlite amd64 2.0.1+ds-1build3 [89.5 kB] 2021-10-01T23:06:05.2904382Z Get:135 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugins amd64 2.0.1+ds-1build3 [12.9 kB] 2021-10-01T23:06:05.2908940Z Get:136 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dcore5 amd64 5.12.8+dfsg-0ubuntu1 [137 kB] 2021-10-01T23:06:05.2931081Z Get:137 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53drender5 amd64 5.12.8+dfsg-0ubuntu1 [689 kB] 2021-10-01T23:06:05.3066737Z Get:138 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53danimation5 amd64 5.12.8+dfsg-0ubuntu1 [159 kB] 2021-10-01T23:06:05.3105396Z Get:139 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dinput5 amd64 5.12.8+dfsg-0ubuntu1 [125 kB] 2021-10-01T23:06:05.3155254Z Get:140 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dlogic5 amd64 5.12.8+dfsg-0ubuntu1 [25.9 kB] 2021-10-01T23:06:05.3158166Z Get:141 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dextras5 amd64 5.12.8+dfsg-0ubuntu1 [157 kB] 2021-10-01T23:06:05.3176010Z Get:142 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-assimpsceneimport-plugin amd64 5.12.8+dfsg-0ubuntu1 [45.2 kB] 2021-10-01T23:06:05.3195732Z Get:143 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-defaultgeometryloader-plugin amd64 5.12.8+dfsg-0ubuntu1 [33.3 kB] 2021-10-01T23:06:05.3210388Z Get:144 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-gltfsceneio-plugin amd64 5.12.8+dfsg-0ubuntu1 [110 kB] 2021-10-01T23:06:05.3214152Z Get:145 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dquickscene2d5 amd64 5.12.8+dfsg-0ubuntu1 [38.4 kB] 2021-10-01T23:06:05.3222577Z Get:146 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-scene2d-plugin amd64 5.12.8+dfsg-0ubuntu1 [17.1 kB] 2021-10-01T23:06:05.3225683Z Get:147 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-3d3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [224 kB] 2021-10-01T23:06:05.3336337Z Get:148 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-analysis3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [927 kB] 2021-10-01T23:06:05.3428741Z Get:149 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-app3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3060 kB] 2021-10-01T23:06:05.3813113Z Get:150 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtchooser amd64 66-2build1 [24.7 kB] 2021-10-01T23:06:05.3815307Z Get:151 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qdoc-qt5 amd64 5.12.8-0ubuntu1 [507 kB] 2021-10-01T23:06:05.3861277Z Get:152 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5help5 amd64 5.12.8-0ubuntu1 [134 kB] 2021-10-01T23:06:05.3875405Z Get:153 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qhelpgenerator-qt5 amd64 5.12.8-0ubuntu1 [64.3 kB] 2021-10-01T23:06:05.3884308Z Get:154 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-assistant amd64 5.12.8-0ubuntu1 [369 kB] 2021-10-01T23:06:05.3922892Z Get:155 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtattributionsscanner-qt5 amd64 5.12.8-0ubuntu1 [26.0 kB] 2021-10-01T23:06:05.3926598Z Get:156 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designer5 amd64 5.12.8-0ubuntu1 [2778 kB] 2021-10-01T23:06:06.2320894Z Get:157 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designercomponents5 amd64 5.12.8-0ubuntu1 [718 kB] 2021-10-01T23:06:06.2325392Z Get:158 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttools5-dev-tools amd64 5.12.8-0ubuntu1 [1031 kB] 2021-10-01T23:06:06.2329752Z Get:159 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-customwidgets amd64 3.10.4+dfsg-1ubuntu2 [3397 kB] 2021-10-01T23:06:06.2331948Z Get:160 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-server3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [311 kB] 2021-10-01T23:06:06.2334138Z Get:161 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgisgrass7-3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [228 kB] 2021-10-01T23:06:06.2336299Z Get:162 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgispython3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [43.1 kB] 2021-10-01T23:06:06.2338523Z Get:163 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libqmi-glib5 amd64 1.28.6-1~20.04 [612 kB] 2021-10-01T23:06:06.2340456Z Get:164 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libqmi-proxy amd64 1.28.6-1~20.04 [5900 B] 2021-10-01T23:06:06.2342424Z Get:165 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5test5 amd64 5.12.8+dfsg-0ubuntu1 [131 kB] 2021-10-01T23:06:06.2344406Z Get:166 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-bin amd64 1.3-2ubuntu3 [5484 B] 2021-10-01T23:06:06.2346362Z Get:167 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 modemmanager amd64 1.16.6-2~20.04 [822 kB] 2021-10-01T23:06:06.2348289Z Get:168 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 ttf-bitstream-vera all 1.10-8 [352 kB] 2021-10-01T23:06:06.2350336Z Get:169 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python-matplotlib-data all 3.1.2-1ubuntu4 [3788 kB] 2021-10-01T23:06:06.2352332Z Get:170 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-soupsieve all 1.9.5+dfsg-1 [29.1 kB] 2021-10-01T23:06:06.2354146Z Get:171 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-bs4 all 4.8.2-1 [83.0 kB] 2021-10-01T23:06:06.2355954Z Get:172 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-cycler all 0.10.0-3 [8132 B] 2021-10-01T23:06:06.2357835Z Get:173 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-dateutil all 2.7.3-3ubuntu1 [63.3 kB] 2021-10-01T23:06:06.2359734Z Get:174 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-decorator all 4.4.2-0ubuntu1 [10.3 kB] 2021-10-01T23:06:06.2361581Z Get:175 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-future all 0.18.2-2 [336 kB] 2021-10-01T23:06:06.2363949Z Get:176 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-webencodings all 0.5.1-1ubuntu1 [11.0 kB] 2021-10-01T23:06:06.2365950Z Get:177 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-html5lib all 1.0.1-2 [84.3 kB] 2021-10-01T23:06:06.2367991Z Get:178 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-ipython-genutils all 0.2.0-1ubuntu1 [21.1 kB] 2021-10-01T23:06:06.2370035Z Get:179 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-traitlets all 4.3.3-3 [59.9 kB] 2021-10-01T23:06:06.2371976Z Get:180 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-jupyter-core all 4.6.3-3 [41.2 kB] 2021-10-01T23:06:06.2373994Z Get:181 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-kiwisolver amd64 1.0.1-3build1 [61.3 kB] 2021-10-01T23:06:06.2376012Z Get:182 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-lxml amd64 4.5.0-1ubuntu0.3 [1382 kB] 2021-10-01T23:06:06.2378053Z Get:183 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-pyparsing all 2.4.6-1 [61.3 kB] 2021-10-01T23:06:06.2380015Z Get:184 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-matplotlib amd64 3.1.2-1ubuntu4 [4459 kB] 2021-10-01T23:06:06.2381982Z Get:185 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-nbformat all 5.0.4-1 [29.8 kB] 2021-10-01T23:06:06.2383814Z Get:186 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-olefile all 0.46-2 [33.7 kB] 2021-10-01T23:06:06.2385657Z Get:187 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyproj amd64 2.5.0+ds-1 [297 kB] 2021-10-01T23:06:06.2387445Z Get:188 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-tz all 2019.3-1 [24.4 kB] 2021-10-01T23:06:06.2389237Z Get:189 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-owslib all 0.19.1-1 [115 kB] 2021-10-01T23:06:06.2391199Z Get:190 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-pil amd64 7.0.0-4ubuntu0.4 [363 kB] 2021-10-01T23:06:06.2393102Z Get:191 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-retrying all 1.3.3-4 [8160 B] 2021-10-01T23:06:06.2394985Z Get:192 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-plotly all 4.4.1+dfsg-1 [1960 kB] 2021-10-01T23:06:06.2396854Z Get:193 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-psycopg2 amd64 2.8.4-2 [112 kB] 2021-10-01T23:06:06.2398766Z Get:194 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-sip amd64 4.19.21+dfsg-1build1 [87.9 kB] 2021-10-01T23:06:06.2400755Z Get:195 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5 amd64 5.14.1+dfsg-3build1 [2318 kB] 2021-10-01T23:06:06.2403080Z Get:196 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qsci amd64 2.11.2+dfsg-6 [230 kB] 2021-10-01T23:06:06.2406653Z Get:197 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsql amd64 5.14.1+dfsg-3build1 [87.5 kB] 2021-10-01T23:06:06.2408816Z Get:198 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsvg amd64 5.14.1+dfsg-3build1 [26.9 kB] 2021-10-01T23:06:06.2410992Z Get:199 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtwebkit amd64 5.14.1+dfsg-3build1 [103 kB] 2021-10-01T23:06:06.2413144Z Get:200 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis-common all 3.10.4+dfsg-1ubuntu2 [2390 kB] 2021-10-01T23:06:06.2415204Z Get:201 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis amd64 3.10.4+dfsg-1ubuntu2 [7772 kB] 2021-10-01T23:06:06.2417215Z Get:202 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-tk amd64 3.8.10-0ubuntu1~20.04 [104 kB] 2021-10-01T23:06:06.2419316Z Get:203 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-leaflet all 1.6.0~dfsg-1 [313 kB] 2021-10-01T23:06:06.2421234Z Get:204 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-common all 3.10.4+dfsg-1ubuntu2 [16.7 MB] 2021-10-01T23:06:06.2423395Z Get:205 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis amd64 3.10.4+dfsg-1ubuntu2 [4788 kB] 2021-10-01T23:06:06.2425590Z Get:206 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass-common all 3.10.4+dfsg-1ubuntu2 [463 kB] 2021-10-01T23:06:06.2427799Z Get:207 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-provider-grass amd64 3.10.4+dfsg-1ubuntu2 [92.3 kB] 2021-10-01T23:06:06.2429926Z Get:208 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass amd64 3.10.4+dfsg-1ubuntu2 [601 kB] 2021-10-01T23:06:06.2432071Z Get:209 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-gtk-platformtheme amd64 5.12.8+dfsg-0ubuntu1 [124 kB] 2021-10-01T23:06:06.2434183Z Get:210 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttranslations5-l10n all 5.12.8-0ubuntu1 [1486 kB] 2021-10-01T23:06:06.2436248Z Get:211 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 wpasupplicant amd64 2:2.9-1ubuntu4.3 [1183 kB] 2021-10-01T23:06:06.2438144Z Get:212 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-bin amd64 6.3.1-1 [88.8 kB] 2021-10-01T23:06:06.2440001Z Get:213 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch-data all 20191128-3 [32.3 kB] 2021-10-01T23:06:06.2441965Z Get:214 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch amd64 2.5.2+repack0-2ubuntu3 [53.1 kB] 2021-10-01T23:06:07.4086318Z Fetched 183 MB in 2s (79.8 MB/s) 2021-10-01T23:06:07.4503106Z Selecting previously unselected package libdouble-conversion3:amd64. 2021-10-01T23:06:07.4591975Z (Reading database ... 2021-10-01T23:06:07.4593178Z (Reading database ... 5% 2021-10-01T23:06:07.4593804Z (Reading database ... 10% 2021-10-01T23:06:07.4594358Z (Reading database ... 15% 2021-10-01T23:06:07.4594974Z (Reading database ... 20% 2021-10-01T23:06:07.4595528Z (Reading database ... 25% 2021-10-01T23:06:07.4596087Z (Reading database ... 30% 2021-10-01T23:06:07.4596635Z (Reading database ... 35% 2021-10-01T23:06:07.4597171Z (Reading database ... 40% 2021-10-01T23:06:07.4597720Z (Reading database ... 45% 2021-10-01T23:06:07.4598268Z (Reading database ... 50% 2021-10-01T23:06:07.4631415Z (Reading database ... 55% 2021-10-01T23:06:07.4669491Z (Reading database ... 60% 2021-10-01T23:06:07.4717711Z (Reading database ... 65% 2021-10-01T23:06:07.4760813Z (Reading database ... 70% 2021-10-01T23:06:07.4910631Z (Reading database ... 75% 2021-10-01T23:06:07.5418122Z (Reading database ... 80% 2021-10-01T23:06:07.5505950Z (Reading database ... 85% 2021-10-01T23:06:07.5869081Z (Reading database ... 90% 2021-10-01T23:06:07.5947607Z (Reading database ... 95% 2021-10-01T23:06:07.5948271Z (Reading database ... 100% 2021-10-01T23:06:07.5949108Z (Reading database ... 273068 files and directories currently installed.) 2021-10-01T23:06:07.6085272Z Preparing to unpack .../000-libdouble-conversion3_3.1.5-4ubuntu1_amd64.deb ... 2021-10-01T23:06:07.6113243Z Unpacking libdouble-conversion3:amd64 (3.1.5-4ubuntu1) ... 2021-10-01T23:06:07.6540092Z Selecting previously unselected package libqt5core5a:amd64. 2021-10-01T23:06:07.6822709Z Preparing to unpack .../001-libqt5core5a_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-10-01T23:06:07.6913388Z Unpacking libqt5core5a:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:07.9021003Z Selecting previously unselected package libegl-mesa0:amd64. 2021-10-01T23:06:07.9311047Z Preparing to unpack .../002-libegl-mesa0_21.0.3-0ubuntu0.3~20.04.2_amd64.deb ... 2021-10-01T23:06:07.9324101Z Unpacking libegl-mesa0:amd64 (21.0.3-0ubuntu0.3~20.04.2) ... 2021-10-01T23:06:07.9695648Z Selecting previously unselected package libegl1:amd64. 2021-10-01T23:06:08.0009024Z Preparing to unpack .../003-libegl1_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-10-01T23:06:08.0024146Z Unpacking libegl1:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-10-01T23:06:08.0362666Z Selecting previously unselected package libevdev2:amd64. 2021-10-01T23:06:08.0689649Z Preparing to unpack .../004-libevdev2_1.9.0+dfsg-1ubuntu0.1_amd64.deb ... 2021-10-01T23:06:08.0706146Z Unpacking libevdev2:amd64 (1.9.0+dfsg-1ubuntu0.1) ... 2021-10-01T23:06:08.1101956Z Selecting previously unselected package libmtdev1:amd64. 2021-10-01T23:06:08.1425020Z Preparing to unpack .../005-libmtdev1_1.1.5-1.1_amd64.deb ... 2021-10-01T23:06:08.1438142Z Unpacking libmtdev1:amd64 (1.1.5-1.1) ... 2021-10-01T23:06:08.1740128Z Selecting previously unselected package libwacom-common. 2021-10-01T23:06:08.2044381Z Preparing to unpack .../006-libwacom-common_1.3-2ubuntu3_all.deb ... 2021-10-01T23:06:08.2052989Z Unpacking libwacom-common (1.3-2ubuntu3) ... 2021-10-01T23:06:08.2899759Z Selecting previously unselected package libwacom2:amd64. 2021-10-01T23:06:08.3153253Z Preparing to unpack .../007-libwacom2_1.3-2ubuntu3_amd64.deb ... 2021-10-01T23:06:08.3168290Z Unpacking libwacom2:amd64 (1.3-2ubuntu3) ... 2021-10-01T23:06:08.3526685Z Selecting previously unselected package libinput-bin. 2021-10-01T23:06:08.3845155Z Preparing to unpack .../008-libinput-bin_1.15.5-1ubuntu0.2_amd64.deb ... 2021-10-01T23:06:08.3859180Z Unpacking libinput-bin (1.15.5-1ubuntu0.2) ... 2021-10-01T23:06:08.4179570Z Selecting previously unselected package libinput10:amd64. 2021-10-01T23:06:08.4488320Z Preparing to unpack .../009-libinput10_1.15.5-1ubuntu0.2_amd64.deb ... 2021-10-01T23:06:08.4499047Z Unpacking libinput10:amd64 (1.15.5-1ubuntu0.2) ... 2021-10-01T23:06:08.4863249Z Selecting previously unselected package libqt5dbus5:amd64. 2021-10-01T23:06:08.5176975Z Preparing to unpack .../010-libqt5dbus5_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-10-01T23:06:08.5188266Z Unpacking libqt5dbus5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:08.5741368Z Selecting previously unselected package libqt5network5:amd64. 2021-10-01T23:06:08.6010243Z Preparing to unpack .../011-libqt5network5_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-10-01T23:06:08.6029371Z Unpacking libqt5network5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:08.7101129Z Selecting previously unselected package libxcb-icccm4:amd64. 2021-10-01T23:06:08.7370812Z Preparing to unpack .../012-libxcb-icccm4_0.4.1-1.1_amd64.deb ... 2021-10-01T23:06:08.7387323Z Unpacking libxcb-icccm4:amd64 (0.4.1-1.1) ... 2021-10-01T23:06:08.7700308Z Selecting previously unselected package libxcb-util1:amd64. 2021-10-01T23:06:08.7975101Z Preparing to unpack .../013-libxcb-util1_0.4.0-0ubuntu3_amd64.deb ... 2021-10-01T23:06:08.7988019Z Unpacking libxcb-util1:amd64 (0.4.0-0ubuntu3) ... 2021-10-01T23:06:08.8299955Z Selecting previously unselected package libxcb-image0:amd64. 2021-10-01T23:06:08.8605947Z Preparing to unpack .../014-libxcb-image0_0.4.0-1build1_amd64.deb ... 2021-10-01T23:06:08.8618822Z Unpacking libxcb-image0:amd64 (0.4.0-1build1) ... 2021-10-01T23:06:08.8899851Z Selecting previously unselected package libxcb-keysyms1:amd64. 2021-10-01T23:06:08.9205670Z Preparing to unpack .../015-libxcb-keysyms1_0.4.0-1build1_amd64.deb ... 2021-10-01T23:06:08.9218804Z Unpacking libxcb-keysyms1:amd64 (0.4.0-1build1) ... 2021-10-01T23:06:08.9532670Z Selecting previously unselected package libxcb-randr0:amd64. 2021-10-01T23:06:08.9876301Z Preparing to unpack .../016-libxcb-randr0_1.14-2_amd64.deb ... 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/etc/systemd/system/multi-user.target.wants/wpa_supplicant.service → /lib/systemd/system/wpa_supplicant.service. 2021-10-01T23:06:50.0876641Z Setting up python3-pil:amd64 (7.0.0-4ubuntu0.4) ... 2021-10-01T23:06:50.4010360Z Setting up libqt5xml5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:50.4045801Z Setting up gstreamer1.0-plugins-base:amd64 (1.16.2-4ubuntu0.1) ... 2021-10-01T23:06:50.4084159Z Setting up libqt5qml5:amd64 (5.12.8-0ubuntu1) ... 2021-10-01T23:06:50.4114353Z Setting up qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:06:50.4145689Z Setting up qtattributionsscanner-qt5 (5.12.8-0ubuntu1) ... 2021-10-01T23:06:50.4176622Z Setting up libqt5webchannel5:amd64 (5.12.8-0ubuntu1) ... 2021-10-01T23:06:50.4209203Z Setting up python3-plotly (4.4.1+dfsg-1) ... 2021-10-01T23:06:50.6071736Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-10-01T23:06:50.6073748Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-10-01T23:06:50.6075517Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-10-01T23:06:50.6077181Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-10-01T23:06:50.6585431Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:194: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-10-01T23:06:50.6587152Z if direction is "increasing": 2021-10-01T23:06:50.6588929Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:199: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-10-01T23:06:50.6590230Z elif direction is "decreasing": 2021-10-01T23:06:50.6813386Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:176: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-10-01T23:06:50.6814896Z if direction is "increasing": 2021-10-01T23:06:50.6817240Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:179: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-10-01T23:06:50.6818502Z elif direction is "decreasing": 2021-10-01T23:06:51.7678640Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:460: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-10-01T23:06:51.7680369Z if props["offset_coordinates"] is "data": 2021-10-01T23:06:51.7682527Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:572: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-10-01T23:06:51.7683881Z if props["coordinates"] is not "data": 2021-10-01T23:06:52.6671136Z Setting up avahi-daemon (0.7-4ubuntu7.1) ... 2021-10-01T23:06:53.3387270Z Created symlink /etc/systemd/system/dbus-org.freedesktop.Avahi.service → /lib/systemd/system/avahi-daemon.service. 2021-10-01T23:06:53.3390160Z Created symlink /etc/systemd/system/multi-user.target.wants/avahi-daemon.service → /lib/systemd/system/avahi-daemon.service. 2021-10-01T23:06:53.3392578Z Created symlink /etc/systemd/system/sockets.target.wants/avahi-daemon.socket → /lib/systemd/system/avahi-daemon.socket. 2021-10-01T23:06:54.6471262Z Setting up libnss-mdns:amd64 (0.14.1-1ubuntu1) ... 2021-10-01T23:06:54.6515143Z First installation detected... 2021-10-01T23:06:54.6516243Z Checking NSS setup... 2021-10-01T23:06:54.6612522Z Setting up libwacom2:amd64 (1.3-2ubuntu3) ... 2021-10-01T23:06:54.6653756Z Setting up libqt5sql5-sqlite:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:54.6722922Z Setting up python3-owslib (0.19.1-1) ... 2021-10-01T23:06:54.9856905Z Setting up libgdal26 (3.0.4+dfsg-1build3) ... 2021-10-01T23:06:54.9894262Z Setting up libqmi-glib5:amd64 (1.28.6-1~20.04) ... 2021-10-01T23:06:54.9933750Z Setting up libpdal-base9 (2.0.1+ds-1build3) ... 2021-10-01T23:06:54.9970764Z Setting up libinput-bin (1.15.5-1ubuntu0.2) ... 2021-10-01T23:06:55.0014142Z Setting up libwacom-bin (1.3-2ubuntu3) ... 2021-10-01T23:06:55.0058912Z Setting up libpdal-plugin-pgpointcloud (2.0.1+ds-1build3) ... 2021-10-01T23:06:55.0095518Z Setting up libpdal-plugin-icebridge (2.0.1+ds-1build3) ... 2021-10-01T23:06:55.0137357Z Setting up libpdal-plugin-python (2.0.1+ds-1build3) ... 2021-10-01T23:06:55.0183871Z Setting up python3-gdal (3.0.4+dfsg-1build3) ... 2021-10-01T23:06:55.2508378Z Setting up libinput10:amd64 (1.15.5-1ubuntu0.2) ... 2021-10-01T23:06:55.2555648Z Setting up libpdal-plugin-faux (2.0.1+ds-1build3) ... 2021-10-01T23:06:55.2597596Z Setting up grass-core (7.8.2-1build3) ... 2021-10-01T23:06:55.6616260Z /usr/lib/grass78/etc/python/grass/pygrass/gis/__init__.py:75: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-10-01T23:06:55.6618785Z if value is '': 2021-10-01T23:06:55.7783417Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-10-01T23:06:55.7784818Z if do_profiling is "True" or do_profiling is "1": 2021-10-01T23:06:55.7786341Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-10-01T23:06:55.7787656Z if do_profiling is "True" or do_profiling is "1": 2021-10-01T23:06:55.7789163Z /usr/lib/grass78/etc/python/grass/temporal/core.py:582: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-10-01T23:06:55.7790558Z if driver_string is not None and driver_string is not "": 2021-10-01T23:06:55.8305713Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-10-01T23:06:55.8306970Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-10-01T23:06:55.8308249Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-10-01T23:06:55.8309369Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-10-01T23:06:55.9059251Z Setting up libpdal-plugin-sqlite (2.0.1+ds-1build3) ... 2021-10-01T23:06:55.9103878Z Setting up libqt5gui5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:55.9226078Z Setting up libqmi-proxy (1.28.6-1~20.04) ... 2021-10-01T23:06:55.9255743Z Setting up libqt5widgets5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:55.9292701Z Setting up libqt53dcore5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:55.9501366Z Setting up libqt5help5:amd64 (5.12.8-0ubuntu1) ... 2021-10-01T23:06:55.9532909Z Setting up libqt53dlogic5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:56.0012603Z Setting up qt5-gtk-platformtheme:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:56.0070190Z Setting up libqgis-native3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:06:56.0100754Z Setting up libqt5printsupport5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:56.0134234Z Setting up gdal-bin (3.0.4+dfsg-1build3) ... 2021-10-01T23:06:56.1195864Z Setting up qt5-image-formats-plugins:amd64 (5.12.8-0ubuntu1) ... 2021-10-01T23:06:56.1230317Z Setting up libqt53dinput5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:56.1258953Z Setting up libqt5opengl5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:56.1296475Z Setting up modemmanager (1.16.6-2~20.04) ... 2021-10-01T23:06:56.2735492Z Created symlink /etc/systemd/system/dbus-org.freedesktop.ModemManager1.service → /lib/systemd/system/ModemManager.service. 2021-10-01T23:06:56.2739102Z Created symlink /etc/systemd/system/multi-user.target.wants/ModemManager.service → /lib/systemd/system/ModemManager.service. 2021-10-01T23:06:56.9264796Z Setting up libqt5quick5:amd64 (5.12.8-0ubuntu1) ... 2021-10-01T23:06:56.9295667Z Setting up libqt5designer5:amd64 (5.12.8-0ubuntu1) ... 2021-10-01T23:06:56.9342006Z Setting up libpdal-plugins (2.0.1+ds-1build3) ... 2021-10-01T23:06:56.9365579Z Setting up libqt5svg5:amd64 (5.12.8-0ubuntu1) ... 2021-10-01T23:06:56.9396828Z Setting up libqt53drender5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:56.9431605Z Setting up qhelpgenerator-qt5 (5.12.8-0ubuntu1) ... 2021-10-01T23:06:56.9459453Z Setting up libqwt-qt5-6 (6.1.4-1.1build1) ... 2021-10-01T23:06:56.9496559Z Setting up libqscintilla2-qt5-15 (2.11.2+dfsg-6) ... 2021-10-01T23:06:56.9527825Z Setting up libqt5webkit5:amd64 (5.212.0~alpha4-1ubuntu2) ... 2021-10-01T23:06:56.9555497Z Setting up libqt5designercomponents5:amd64 (5.12.8-0ubuntu1) ... 2021-10-01T23:06:56.9589246Z Setting up libqt5quickwidgets5:amd64 (5.12.8-0ubuntu1) ... 2021-10-01T23:06:56.9642384Z Setting up libqgis-core3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:06:56.9700900Z Setting up libqt53dquickscene2d5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:56.9739580Z Setting up libqgis-gui3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:06:56.9772627Z Setting up libqgis-analysis3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:06:56.9805864Z Setting up qt5-assistant (5.12.8-0ubuntu1) ... 2021-10-01T23:06:56.9875487Z Setting up qttools5-dev-tools (5.12.8-0ubuntu1) ... 2021-10-01T23:06:56.9906900Z Setting up libqgispython3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:06:56.9940648Z Setting up qt3d-scene2d-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:56.9979164Z Setting up python3-pyqt5 (5.14.1+dfsg-3build1) ... 2021-10-01T23:06:57.1981599Z Setting up python3-pyqt5.qtsvg (5.14.1+dfsg-3build1) ... 2021-10-01T23:06:57.2028067Z Setting up libqt53danimation5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:57.2064432Z Setting up qt3d-defaultgeometryloader-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:06:57.2103667Z Setting up qgis-providers (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:07:33.9138983Z Setting up libqt53dextras5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:07:33.9180472Z Setting up python3-pyqt5.qtsql (5.14.1+dfsg-3build1) ... 2021-10-01T23:07:33.9216114Z Setting up libqgis-customwidgets (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:07:33.9259960Z Setting up qt3d-gltfsceneio-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:07:33.9290601Z Setting up libqgis-server3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:07:33.9339810Z Setting up libqgisgrass7-3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:07:33.9383413Z Setting up qt3d-assimpsceneimport-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-10-01T23:07:33.9420199Z Setting up python3-qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:07:34.1094926Z Setting up libqgis-3d3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:07:34.1129766Z Setting up python3-pyqt5.qtwebkit (5.14.1+dfsg-3build1) ... 2021-10-01T23:07:34.1163536Z Setting up qgis-provider-grass (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:07:34.1196743Z Setting up python3-pyqt5.qsci (2.11.2+dfsg-6) ... 2021-10-01T23:07:34.1227383Z Setting up python3-qgis (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:07:34.3164622Z Setting up libqgis-app3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:07:34.3199508Z Setting up qgis (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:07:34.3240745Z Setting up qgis-plugin-grass (3.10.4+dfsg-1ubuntu2) ... 2021-10-01T23:07:34.3655164Z Processing triggers for dbus (1.12.16-2ubuntu2.1) ... 2021-10-01T23:07:34.3854813Z Processing triggers for shared-mime-info (1.15-1) ... 2021-10-01T23:07:35.3986092Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-10-01T23:07:35.4185813Z Processing triggers for mime-support (3.64ubuntu1) ... 2021-10-01T23:07:35.4467180Z Processing triggers for hicolor-icon-theme (0.17-2) ... 2021-10-01T23:07:35.4652144Z Processing triggers for libglib2.0-0:amd64 (2.64.6-1~ubuntu20.04.4) ... 2021-10-01T23:07:35.5559071Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:07:35.5935369Z Processing triggers for systemd (245.4-4ubuntu3.13) ... 2021-10-01T23:07:35.8973015Z Processing triggers for man-db (2.9.1-1) ... 2021-10-01T23:07:56.8067049Z Setting up pinentry-gnome3 (1.1.0-3build1) ... 2021-10-01T23:07:56.8273571Z Setting up gnome-keyring (3.36.0-1ubuntu1) ... 2021-10-01T23:07:58.8151713Z ##[group]Run adigherman/actions/get-repo-name@master 2021-10-01T23:07:58.8152330Z with: 2021-10-01T23:07:58.8152906Z github_slug: neuroconductor/ciftiTools 2021-10-01T23:07:58.8153428Z env: 2021-10-01T23:07:58.8153923Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:07:58.8154456Z TIC_DEPLOY_KEY: 2021-10-01T23:07:58.8155352Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:07:58.8157295Z GITHUB_PAT: *** 2021-10-01T23:07:58.8158203Z COVERALLS_TOKEN: *** 2021-10-01T23:07:58.8158767Z continue-on-error: false 2021-10-01T23:07:58.8159310Z VDIFFR_RUN_TESTS: 2021-10-01T23:07:58.8159866Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:07:58.8160359Z TZ: UTC 2021-10-01T23:07:58.8160803Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:07:58.8161279Z NOT_CRAN: true 2021-10-01T23:07:58.8161695Z ##[endgroup] 2021-10-01T23:07:58.8539727Z repo slug is: neuroconductor/ciftiTools 2021-10-01T23:07:58.8647692Z ##[group]Run adigherman/actions/get-repo-version@master 2021-10-01T23:07:58.8648336Z env: 2021-10-01T23:07:58.8648853Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:07:58.8649403Z TIC_DEPLOY_KEY: 2021-10-01T23:07:58.8650743Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:07:58.8652626Z GITHUB_PAT: *** 2021-10-01T23:07:58.8653562Z COVERALLS_TOKEN: *** 2021-10-01T23:07:58.8654140Z continue-on-error: false 2021-10-01T23:07:58.8654684Z VDIFFR_RUN_TESTS: 2021-10-01T23:07:58.8655228Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:07:58.8655759Z TZ: UTC 2021-10-01T23:07:58.8656193Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:07:58.8656677Z NOT_CRAN: true 2021-10-01T23:07:58.8657109Z ##[endgroup] 2021-10-01T23:07:58.8683304Z ##[group]Run echo ::set-output name=PKG_VER::$(Rscript -e "cat(read.dcf('DESCRIPTION')[, 'Version'])") 2021-10-01T23:07:58.8684765Z echo ::set-output name=PKG_VER::$(Rscript -e "cat(read.dcf('DESCRIPTION')[, 'Version'])") 2021-10-01T23:07:58.8741231Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-10-01T23:07:58.8741801Z env: 2021-10-01T23:07:58.8742308Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:07:58.8742834Z TIC_DEPLOY_KEY: 2021-10-01T23:07:58.8743737Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:07:58.8745246Z GITHUB_PAT: *** 2021-10-01T23:07:58.8746143Z COVERALLS_TOKEN: *** 2021-10-01T23:07:58.8747109Z continue-on-error: false 2021-10-01T23:07:58.8747669Z VDIFFR_RUN_TESTS: 2021-10-01T23:07:58.8748754Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:07:58.8749248Z TZ: UTC 2021-10-01T23:07:58.8749694Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:07:58.8750150Z NOT_CRAN: true 2021-10-01T23:07:58.8750581Z ##[endgroup] 2021-10-01T23:07:59.0784445Z ##[group]Run adigherman/actions/get-release-asset@master 2021-10-01T23:07:59.0785110Z with: 2021-10-01T23:07:59.0785560Z repo_name: ciftiTools 2021-10-01T23:07:59.0786030Z repo_version: 0.6.1 2021-10-01T23:07:59.0786484Z runner_os: Linux 2021-10-01T23:07:59.0786895Z R_version: 3.5 2021-10-01T23:07:59.0787291Z env: 2021-10-01T23:07:59.0787785Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:07:59.0788302Z TIC_DEPLOY_KEY: 2021-10-01T23:07:59.0789202Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:07:59.0791152Z GITHUB_PAT: *** 2021-10-01T23:07:59.0792047Z COVERALLS_TOKEN: *** 2021-10-01T23:07:59.0792610Z continue-on-error: false 2021-10-01T23:07:59.0793202Z VDIFFR_RUN_TESTS: 2021-10-01T23:07:59.0793754Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:07:59.0794260Z TZ: UTC 2021-10-01T23:07:59.0794706Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:07:59.0795166Z NOT_CRAN: true 2021-10-01T23:07:59.0795636Z ##[endgroup] 2021-10-01T23:07:59.1202924Z Package: ciftiTools 2021-10-01T23:07:59.1212011Z Version: 0.6.1 2021-10-01T23:07:59.1214635Z OS: Linux 2021-10-01T23:07:59.1317972Z ##[group]Run install.packages('remotes') 2021-10-01T23:07:59.1318909Z install.packages('remotes') 2021-10-01T23:07:59.1319821Z saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) 2021-10-01T23:07:59.1321080Z writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") 2021-10-01T23:07:59.1332004Z shell: /usr/local/bin/Rscript {0} 2021-10-01T23:07:59.1332482Z env: 2021-10-01T23:07:59.1332985Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:07:59.1333671Z TIC_DEPLOY_KEY: 2021-10-01T23:07:59.1334581Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:07:59.1336248Z GITHUB_PAT: *** 2021-10-01T23:07:59.1337146Z COVERALLS_TOKEN: *** 2021-10-01T23:07:59.1338011Z continue-on-error: false 2021-10-01T23:07:59.1338561Z VDIFFR_RUN_TESTS: 2021-10-01T23:07:59.1339095Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:07:59.1339630Z TZ: UTC 2021-10-01T23:07:59.1340202Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:07:59.1340668Z NOT_CRAN: true 2021-10-01T23:07:59.1341113Z ##[endgroup] 2021-10-01T23:07:59.3281928Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:07:59.3283086Z (as ‘lib’ is unspecified) 2021-10-01T23:08:15.2958008Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/remotes_2.4.1.tar.gz' 2021-10-01T23:08:15.9514737Z Content type 'binary/octet-stream' length 393571 bytes (384 KB) 2021-10-01T23:08:15.9568308Z ================================================== 2021-10-01T23:08:15.9569385Z downloaded 384 KB 2021-10-01T23:08:15.9569931Z 2021-10-01T23:08:16.2109674Z * installing *binary* package ‘remotes’ ... 2021-10-01T23:08:16.2175484Z * DONE (remotes) 2021-10-01T23:08:16.2260269Z 2021-10-01T23:08:16.2261508Z The downloaded source packages are in 2021-10-01T23:08:16.2263208Z ‘/tmp/RtmpIRXS59/downloaded_packages’ 2021-10-01T23:08:36.7011446Z ##[group]Run actions/cache@v1 2021-10-01T23:08:36.7011922Z with: 2021-10-01T23:08:36.7012415Z path: /home/runner/work/_temp/Library 2021-10-01T23:08:36.7015316Z key: Linux-2e7742fb4e078f3534d94dc0dec3f866c8c4a14293f49c24c0013aac36169a0f-1-5b744655f14d27921b63508abd27434ea70a5e8e2f7fabdfe8e050ef2263d5cf 2021-10-01T23:08:36.7019269Z restore-keys: Linux-2e7742fb4e078f3534d94dc0dec3f866c8c4a14293f49c24c0013aac36169a0f-1- 2021-10-01T23:08:36.7020539Z env: 2021-10-01T23:08:36.7021021Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:08:36.7021551Z TIC_DEPLOY_KEY: 2021-10-01T23:08:36.7022453Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:08:36.7024880Z GITHUB_PAT: *** 2021-10-01T23:08:36.7025776Z COVERALLS_TOKEN: *** 2021-10-01T23:08:36.7026335Z continue-on-error: false 2021-10-01T23:08:36.7026873Z VDIFFR_RUN_TESTS: 2021-10-01T23:08:36.7027402Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:08:36.7027966Z TZ: UTC 2021-10-01T23:08:36.7028412Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:08:36.7028883Z NOT_CRAN: true 2021-10-01T23:08:36.7029289Z ##[endgroup] 2021-10-01T23:08:36.7526978Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-10-01T23:08:36.7674573Z ##[group]Run Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-10-01T23:08:36.7675488Z Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-10-01T23:08:36.7676330Z sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") 2021-10-01T23:08:36.7677032Z sudo -s eval "$sysreqs" 2021-10-01T23:08:36.7727560Z shell: /usr/bin/bash -e {0} 2021-10-01T23:08:36.7728014Z env: 2021-10-01T23:08:36.7728520Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:08:36.7729061Z TIC_DEPLOY_KEY: 2021-10-01T23:08:36.7729961Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:08:36.7731567Z GITHUB_PAT: *** 2021-10-01T23:08:36.7732467Z COVERALLS_TOKEN: *** 2021-10-01T23:08:36.7733017Z continue-on-error: false 2021-10-01T23:08:36.7733568Z VDIFFR_RUN_TESTS: 2021-10-01T23:08:36.7734127Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:08:36.7734623Z TZ: UTC 2021-10-01T23:08:36.7735085Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:08:36.7735558Z NOT_CRAN: true 2021-10-01T23:08:36.7736096Z RHUB_PLATFORM: linux-x86_64-ubuntu-gcc 2021-10-01T23:08:36.7736628Z ##[endgroup] 2021-10-01T23:08:36.9907319Z Using github PAT from envvar GITHUB_PAT 2021-10-01T23:08:37.5281684Z Downloading GitHub repo r-hub/sysreqs@HEAD 2021-10-01T23:08:56.5329479Z rprojroot (NA -> 2.0.2) [CRAN] 2021-10-01T23:08:56.5333020Z crayon (NA -> 1.4.1) [CRAN] 2021-10-01T23:08:56.5333991Z R6 (NA -> 2.5.1) [CRAN] 2021-10-01T23:08:56.5334801Z desc (NA -> 1.4.0) [CRAN] 2021-10-01T23:08:56.5335627Z debugme (NA -> 1.1.0) [CRAN] 2021-10-01T23:08:56.5356822Z Installing 5 packages: rprojroot, crayon, R6, desc, debugme 2021-10-01T23:08:56.5465810Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:08:56.5473810Z (as ‘lib’ is unspecified) 2021-10-01T23:09:12.3782268Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rprojroot_2.0.2.tar.gz' 2021-10-01T23:09:14.1143640Z Content type 'binary/octet-stream' length 96231 bytes (93 KB) 2021-10-01T23:09:14.1166451Z ================================================== 2021-10-01T23:09:14.1167403Z downloaded 93 KB 2021-10-01T23:09:14.1168008Z 2021-10-01T23:09:14.1204949Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/crayon_1.4.1.tar.gz' 2021-10-01T23:09:14.8159933Z Content type 'binary/octet-stream' length 137956 bytes (134 KB) 2021-10-01T23:09:14.8194397Z ================================================== 2021-10-01T23:09:14.8195308Z downloaded 134 KB 2021-10-01T23:09:14.8195863Z 2021-10-01T23:09:14.8235033Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R6_2.5.1.tar.gz' 2021-10-01T23:09:15.4935245Z Content type 'binary/octet-stream' length 81820 bytes (79 KB) 2021-10-01T23:09:15.4950560Z ================================================== 2021-10-01T23:09:15.4952122Z downloaded 79 KB 2021-10-01T23:09:15.4953071Z 2021-10-01T23:09:15.4996429Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/desc_1.4.0.tar.gz' 2021-10-01T23:09:16.1554853Z Content type 'binary/octet-stream' length 534763 bytes (522 KB) 2021-10-01T23:09:16.1621693Z ================================================== 2021-10-01T23:09:16.1623665Z downloaded 522 KB 2021-10-01T23:09:16.1625601Z 2021-10-01T23:09:16.1688072Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/debugme_1.1.0.tar.gz' 2021-10-01T23:09:17.7240024Z Content type 'binary/octet-stream' length 1015031 bytes (991 KB) 2021-10-01T23:09:17.7458033Z ================================================== 2021-10-01T23:09:17.7459200Z downloaded 991 KB 2021-10-01T23:09:17.7459761Z 2021-10-01T23:09:17.9870706Z * installing *binary* package ‘rprojroot’ ... 2021-10-01T23:09:17.9951808Z * DONE (rprojroot) 2021-10-01T23:09:18.2161831Z * installing *binary* package ‘crayon’ ... 2021-10-01T23:09:18.2206596Z * DONE (crayon) 2021-10-01T23:09:18.4625918Z * installing *binary* package ‘R6’ ... 2021-10-01T23:09:18.4672533Z * DONE (R6) 2021-10-01T23:09:18.7304323Z * installing *binary* package ‘desc’ ... 2021-10-01T23:09:18.7358412Z * DONE (desc) 2021-10-01T23:09:18.9982288Z * installing *binary* package ‘debugme’ ... 2021-10-01T23:09:19.0046904Z * DONE (debugme) 2021-10-01T23:09:19.0148781Z 2021-10-01T23:09:19.0150148Z The downloaded source packages are in 2021-10-01T23:09:19.0151724Z ‘/tmp/RtmpI6g4rn/downloaded_packages’ 2021-10-01T23:09:19.0161243Z Running `R CMD build`... 2021-10-01T23:09:19.3132415Z * checking for file ‘/tmp/RtmpI6g4rn/remotes8e3a403aa50e/r-hub-sysreqs-f068afa/DESCRIPTION’ ... OK 2021-10-01T23:09:19.3134176Z * preparing ‘sysreqs’: 2021-10-01T23:09:19.3135278Z * checking DESCRIPTION meta-information ... OK 2021-10-01T23:09:19.3136630Z * checking for LF line-endings in source and make files and shell scripts 2021-10-01T23:09:19.3137656Z * checking for empty or unneeded directories 2021-10-01T23:09:19.3138932Z * building ‘sysreqs_1.0.0.9000.tar.gz’ 2021-10-01T23:09:19.3151656Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:09:19.3153386Z (as ‘lib’ is unspecified) 2021-10-01T23:09:19.5350029Z * installing *source* package ‘sysreqs’ ... 2021-10-01T23:09:19.5495972Z ** R 2021-10-01T23:09:19.5593999Z ** byte-compile and prepare package for lazy loading 2021-10-01T23:09:19.7441026Z ** help 2021-10-01T23:09:19.7570860Z *** installing help indices 2021-10-01T23:09:19.7784797Z ** building package indices 2021-10-01T23:09:19.7901015Z ** testing if installed package can be loaded 2021-10-01T23:09:19.9992771Z * DONE (sysreqs) 2021-10-01T23:09:39.8520981Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-10-01T23:09:39.8523794Z Hit:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease 2021-10-01T23:09:39.8525767Z Hit:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease 2021-10-01T23:09:39.8638170Z Hit:4 http://security.ubuntu.com/ubuntu focal-security InRelease 2021-10-01T23:09:39.8775576Z Hit:5 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease 2021-10-01T23:09:39.9880333Z Hit:6 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease 2021-10-01T23:09:40.1386509Z Hit:7 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-10-01T23:09:41.7511999Z Reading package lists... 2021-10-01T23:09:41.8441309Z Reading package lists... 2021-10-01T23:09:42.0338167Z Building dependency tree... 2021-10-01T23:09:42.0363061Z Reading state information... 2021-10-01T23:09:42.2151533Z libglu1-mesa-dev is already the newest version (9.0.1-1build1). 2021-10-01T23:09:42.2152729Z libicu-dev is already the newest version (66.1-2ubuntu2). 2021-10-01T23:09:42.2153669Z libicu-dev set to manually installed. 2021-10-01T23:09:42.2154637Z libpng-dev is already the newest version (1.6.37-2). 2021-10-01T23:09:42.2155550Z make is already the newest version (4.2.1-1.2). 2021-10-01T23:09:42.2156592Z make set to manually installed. 2021-10-01T23:09:42.2157672Z libssl-dev is already the newest version (1.1.1f-1ubuntu2.8). 2021-10-01T23:09:42.2158872Z libxml2-dev is already the newest version (2.9.10+dfsg-5ubuntu0.20.04.1). 2021-10-01T23:09:42.2159917Z libxml2-dev set to manually installed. 2021-10-01T23:09:42.2161354Z zlib1g-dev is already the newest version (1:1.2.11.dfsg-2ubuntu1.2). 2021-10-01T23:09:42.2162369Z pandoc is already the newest version (2.7.3-1). 2021-10-01T23:09:42.2165549Z The following additional packages will be installed: 2021-10-01T23:09:42.2167599Z libbibutils6 libegl-dev libghc-pandoc-citeproc-data libgles-dev libgles1 2021-10-01T23:09:42.2169093Z libgles2 libglvnd-dev libopengl-dev libopengl0 2021-10-01T23:09:42.2171961Z Suggested packages: 2021-10-01T23:09:42.2173166Z libcurl4-doc libidn11-dev libldap2-dev librtmp-dev 2021-10-01T23:09:42.2782800Z The following NEW packages will be installed: 2021-10-01T23:09:42.2787429Z libbibutils6 libcurl4-openssl-dev libegl-dev libghc-pandoc-citeproc-data 2021-10-01T23:09:42.2789807Z libgl1-mesa-dev libgles-dev libgles1 libgles2 libglvnd-dev libopengl-dev 2021-10-01T23:09:42.2793554Z libopengl0 pandoc-citeproc 2021-10-01T23:09:42.3189585Z 0 upgraded, 12 newly installed, 0 to remove and 15 not upgraded. 2021-10-01T23:09:42.3759075Z Need to get 13.8 MB of archives. 2021-10-01T23:09:42.3760497Z After this operation, 110 MB of additional disk space will be used. 2021-10-01T23:09:42.3762859Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbibutils6 amd64 6.2-1 [365 kB] 2021-10-01T23:09:42.3955478Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcurl4-openssl-dev amd64 7.68.0-1ubuntu2.7 [321 kB] 2021-10-01T23:09:42.4058570Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [17.2 kB] 2021-10-01T23:09:42.4069231Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgles1 amd64 1.3.2-1~ubuntu0.20.04.1 [10.3 kB] 2021-10-01T23:09:42.4080536Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgles2 amd64 1.3.2-1~ubuntu0.20.04.1 [15.6 kB] 2021-10-01T23:09:42.4091187Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgles-dev amd64 1.3.2-1~ubuntu0.20.04.1 [48.0 kB] 2021-10-01T23:09:42.4096172Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopengl0 amd64 1.3.2-1~ubuntu0.20.04.1 [29.3 kB] 2021-10-01T23:09:42.4098907Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopengl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [3584 B] 2021-10-01T23:09:42.4103957Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libghc-pandoc-citeproc-data all 0.15.0.1-1build4 [51.1 kB] 2021-10-01T23:09:42.4106258Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libglvnd-dev amd64 1.3.2-1~ubuntu0.20.04.1 [11.6 kB] 2021-10-01T23:09:42.4108386Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgl1-mesa-dev amd64 21.0.3-0ubuntu0.3~20.04.2 [6484 B] 2021-10-01T23:09:42.4110483Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 pandoc-citeproc amd64 0.15.0.1-1build4 [12.9 MB] 2021-10-01T23:09:43.1058795Z Fetched 13.8 MB in 0s (71.7 MB/s) 2021-10-01T23:09:43.1473258Z Selecting previously unselected package libbibutils6. 2021-10-01T23:09:43.1585295Z (Reading database ... 2021-10-01T23:09:43.1586315Z (Reading database ... 5% 2021-10-01T23:09:43.1587532Z (Reading database ... 10% 2021-10-01T23:09:43.1588619Z (Reading database ... 15% 2021-10-01T23:09:43.1589464Z (Reading database ... 20% 2021-10-01T23:09:43.1590097Z (Reading database ... 25% 2021-10-01T23:09:43.1590637Z (Reading database ... 30% 2021-10-01T23:09:43.1591189Z (Reading database ... 35% 2021-10-01T23:09:43.1591737Z (Reading database ... 40% 2021-10-01T23:09:43.1592272Z (Reading database ... 45% 2021-10-01T23:09:43.1596569Z (Reading database ... 50% 2021-10-01T23:09:43.1649563Z (Reading database ... 55% 2021-10-01T23:09:43.1694502Z (Reading database ... 60% 2021-10-01T23:09:43.1729847Z (Reading database ... 65% 2021-10-01T23:09:43.1791653Z (Reading database ... 70% 2021-10-01T23:09:43.1941824Z (Reading database ... 75% 2021-10-01T23:09:43.2499718Z (Reading database ... 80% 2021-10-01T23:09:43.2801164Z (Reading database ... 85% 2021-10-01T23:09:43.2956641Z (Reading database ... 90% 2021-10-01T23:09:43.3081991Z (Reading database ... 95% 2021-10-01T23:09:43.3082624Z (Reading database ... 100% 2021-10-01T23:09:43.3083800Z (Reading database ... 288288 files and directories currently installed.) 2021-10-01T23:09:43.3226100Z Preparing to unpack .../00-libbibutils6_6.2-1_amd64.deb ... 2021-10-01T23:09:43.3252778Z Unpacking libbibutils6 (6.2-1) ... 2021-10-01T23:09:43.4061302Z Selecting previously unselected package libcurl4-openssl-dev:amd64. 2021-10-01T23:09:43.4359148Z Preparing to unpack .../01-libcurl4-openssl-dev_7.68.0-1ubuntu2.7_amd64.deb ... 2021-10-01T23:09:43.4370698Z Unpacking libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.7) ... 2021-10-01T23:09:43.5020492Z Selecting previously unselected package libegl-dev:amd64. 2021-10-01T23:09:43.5336079Z Preparing to unpack .../02-libegl-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-10-01T23:09:43.5351361Z Unpacking libegl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-10-01T23:09:43.5699817Z Selecting previously unselected package libgles1:amd64. 2021-10-01T23:09:43.5993996Z Preparing to unpack .../03-libgles1_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-10-01T23:09:43.6007712Z Unpacking libgles1:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-10-01T23:09:43.6299967Z Selecting previously unselected package libgles2:amd64. 2021-10-01T23:09:43.6632226Z 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Preparing to unpack .../11-pandoc-citeproc_0.15.0.1-1build4_amd64.deb ... 2021-10-01T23:09:44.1403696Z Unpacking pandoc-citeproc (0.15.0.1-1build4) ... 2021-10-01T23:09:44.1457303Z Replaced by files in installed package pandoc (2.7.3-1) ... 2021-10-01T23:09:45.7609727Z Setting up libegl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-10-01T23:09:45.7648861Z Setting up libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-10-01T23:09:45.7679414Z Setting up libopengl0:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-10-01T23:09:45.7709762Z Setting up libbibutils6 (6.2-1) ... 2021-10-01T23:09:45.7747362Z Setting up libgles2:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-10-01T23:09:45.7778791Z Setting up libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.7) ... 2021-10-01T23:09:45.7805958Z Setting up libgles1:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-10-01T23:09:45.7834317Z Setting up libopengl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-10-01T23:09:45.7867497Z Setting up libgles-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-10-01T23:09:45.7901448Z Setting up pandoc-citeproc (0.15.0.1-1build4) ... 2021-10-01T23:09:45.7938979Z Setting up libglvnd-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-10-01T23:09:45.7966192Z Setting up libgl1-mesa-dev:amd64 (21.0.3-0ubuntu0.3~20.04.2) ... 2021-10-01T23:09:45.8003700Z Processing triggers for man-db (2.9.1-1) ... 2021-10-01T23:09:53.0890443Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-10-01T23:09:55.0908806Z ##[group]Run remotes::install_github("ropensci/tic") 2021-10-01T23:09:55.0909611Z remotes::install_github("ropensci/tic") 2021-10-01T23:09:55.0910339Z remotes::install_github("muschellij2/ghtravis") 2021-10-01T23:09:55.0911096Z remotes::install_github("muschellij2/aghast") 2021-10-01T23:09:55.0911737Z remotes::install_cran("covr") 2021-10-01T23:09:55.0921112Z shell: /usr/local/bin/Rscript {0} 2021-10-01T23:09:55.0921601Z env: 2021-10-01T23:09:55.0922117Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:09:55.0922635Z TIC_DEPLOY_KEY: 2021-10-01T23:09:55.0923536Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:09:55.0925359Z GITHUB_PAT: *** 2021-10-01T23:09:55.0926585Z COVERALLS_TOKEN: *** 2021-10-01T23:09:55.0927139Z continue-on-error: false 2021-10-01T23:09:55.0927679Z VDIFFR_RUN_TESTS: 2021-10-01T23:09:55.0928210Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:09:55.0928777Z TZ: UTC 2021-10-01T23:09:55.0929202Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:09:55.0929668Z NOT_CRAN: true 2021-10-01T23:09:55.0930077Z ##[endgroup] 2021-10-01T23:09:55.2929241Z Using github PAT from envvar GITHUB_PAT 2021-10-01T23:09:55.8588561Z Downloading GitHub repo ropensci/tic@HEAD 2021-10-01T23:10:14.4178942Z rlang (NA -> 0.4.11) [CRAN] 2021-10-01T23:10:14.4179744Z magrittr (NA -> 2.0.1 ) [CRAN] 2021-10-01T23:10:14.4180429Z glue (NA -> 1.4.2 ) [CRAN] 2021-10-01T23:10:14.4181124Z sys (NA -> 3.4 ) [CRAN] 2021-10-01T23:10:14.4181806Z askpass (NA -> 1.1 ) [CRAN] 2021-10-01T23:10:14.4182491Z openssl (NA -> 1.4.5 ) [CRAN] 2021-10-01T23:10:14.4183178Z mime (NA -> 0.12 ) [CRAN] 2021-10-01T23:10:14.4183825Z curl (NA -> 4.3.2 ) [CRAN] 2021-10-01T23:10:14.4184509Z jsonlite (NA -> 1.7.2 ) [CRAN] 2021-10-01T23:10:14.4185184Z ini (NA -> 0.3.1 ) [CRAN] 2021-10-01T23:10:14.4185824Z httr (NA -> 1.4.2 ) [CRAN] 2021-10-01T23:10:14.4186517Z gitcreds (NA -> 0.1.1 ) [CRAN] 2021-10-01T23:10:14.4187191Z cli (NA -> 3.0.1 ) [CRAN] 2021-10-01T23:10:14.4187827Z zip (NA -> 2.2.0 ) [CRAN] 2021-10-01T23:10:14.4188517Z rstudioapi (NA -> 0.13 ) [CRAN] 2021-10-01T23:10:14.4189249Z credentials (NA -> 1.3.1 ) [CRAN] 2021-10-01T23:10:14.4189946Z fastmap (NA -> 1.1.0 ) [CRAN] 2021-10-01T23:10:14.4190619Z yaml (NA -> 2.2.1 ) [CRAN] 2021-10-01T23:10:14.4191277Z withr (NA -> 2.4.2 ) [CRAN] 2021-10-01T23:10:14.4191942Z whisker (NA -> 0.4 ) [CRAN] 2021-10-01T23:10:14.4192637Z rappdirs (NA -> 0.3.3 ) [CRAN] 2021-10-01T23:10:14.4193311Z purrr (NA -> 0.3.4 ) [CRAN] 2021-10-01T23:10:14.4194002Z lifecycle (NA -> 1.0.1 ) [CRAN] 2021-10-01T23:10:14.4194684Z gh (NA -> 1.3.0 ) [CRAN] 2021-10-01T23:10:14.4195328Z gert (NA -> 1.4.1 ) [CRAN] 2021-10-01T23:10:14.4195981Z fs (NA -> 1.5.0 ) [CRAN] 2021-10-01T23:10:14.4196636Z clipr (NA -> 0.7.1 ) [CRAN] 2021-10-01T23:10:14.4197298Z cachem (NA -> 1.0.6 ) [CRAN] 2021-10-01T23:10:14.4197981Z usethis (NA -> 2.0.1 ) [CRAN] 2021-10-01T23:10:14.4198670Z memoise (NA -> 2.0.0 ) [CRAN] 2021-10-01T23:10:14.4199338Z git2r (NA -> 0.28.0) [CRAN] 2021-10-01T23:10:14.4210353Z Installing 31 packages: rlang, magrittr, glue, sys, askpass, openssl, mime, curl, jsonlite, ini, httr, gitcreds, cli, zip, rstudioapi, credentials, fastmap, yaml, withr, whisker, rappdirs, purrr, lifecycle, gh, gert, fs, clipr, cachem, usethis, memoise, git2r 2021-10-01T23:10:14.4340912Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:10:14.4342231Z (as ‘lib’ is unspecified) 2021-10-01T23:10:30.4371271Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rlang_0.4.11.tar.gz' 2021-10-01T23:10:31.3067404Z Content type 'binary/octet-stream' length 1389190 bytes (1.3 MB) 2021-10-01T23:10:31.3624194Z ================================================== 2021-10-01T23:10:31.3625391Z downloaded 1.3 MB 2021-10-01T23:10:31.3626278Z 2021-10-01T23:10:31.3665394Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/magrittr_2.0.1.tar.gz' 2021-10-01T23:10:32.4712578Z Content type 'binary/octet-stream' length 231600 bytes (226 KB) 2021-10-01T23:10:32.4753463Z ================================================== 2021-10-01T23:10:32.4755826Z downloaded 226 KB 2021-10-01T23:10:32.4756834Z 2021-10-01T23:10:32.4792942Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/glue_1.4.2.tar.gz' 2021-10-01T23:10:33.3341954Z Content type 'binary/octet-stream' length 143742 bytes (140 KB) 2021-10-01T23:10:33.3372958Z ================================================== 2021-10-01T23:10:33.3373575Z downloaded 140 KB 2021-10-01T23:10:33.3373898Z 2021-10-01T23:10:33.3416758Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sys_3.4.tar.gz' 2021-10-01T23:10:33.9973550Z Content type 'binary/octet-stream' length 54882 bytes (53 KB) 2021-10-01T23:10:33.9975272Z ================================================== 2021-10-01T23:10:33.9976007Z downloaded 53 KB 2021-10-01T23:10:33.9976549Z 2021-10-01T23:10:34.0029630Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/askpass_1.1.tar.gz' 2021-10-01T23:10:34.5530607Z Content type 'binary/octet-stream' length 23519 bytes (22 KB) 2021-10-01T23:10:34.5532024Z ================================================== 2021-10-01T23:10:34.5532750Z downloaded 22 KB 2021-10-01T23:10:34.5533297Z 2021-10-01T23:10:34.5575018Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/openssl_1.4.5.tar.gz' 2021-10-01T23:10:35.2326466Z Content type 'binary/octet-stream' length 1490651 bytes (1.4 MB) 2021-10-01T23:10:35.2651745Z ================================================== 2021-10-01T23:10:35.2653021Z downloaded 1.4 MB 2021-10-01T23:10:35.2655928Z 2021-10-01T23:10:35.2705677Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/mime_0.12.tar.gz' 2021-10-01T23:10:35.8631317Z Content type 'binary/octet-stream' length 36833 bytes (35 KB) 2021-10-01T23:10:35.8637725Z ================================================== 2021-10-01T23:10:35.8638573Z downloaded 35 KB 2021-10-01T23:10:35.8639200Z 2021-10-01T23:10:35.8690866Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/curl_4.3.2.tar.gz' 2021-10-01T23:10:36.5243446Z Content type 'binary/octet-stream' length 905487 bytes (884 KB) 2021-10-01T23:10:36.5329310Z ================================================== 2021-10-01T23:10:36.5330355Z downloaded 884 KB 2021-10-01T23:10:36.5330897Z 2021-10-01T23:10:36.5370860Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/jsonlite_1.7.2.tar.gz' 2021-10-01T23:10:38.6119734Z Content type 'binary/octet-stream' length 535092 bytes (522 KB) 2021-10-01T23:10:38.6202621Z ================================================== 2021-10-01T23:10:38.6203531Z downloaded 522 KB 2021-10-01T23:10:38.6204289Z 2021-10-01T23:10:38.6248961Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ini_0.3.1.tar.gz' 2021-10-01T23:10:39.2949744Z Content type 'binary/octet-stream' length 12966 bytes (12 KB) 2021-10-01T23:10:39.2954311Z ================================================== 2021-10-01T23:10:39.2955211Z downloaded 12 KB 2021-10-01T23:10:39.2955751Z 2021-10-01T23:10:39.3004091Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/httr_1.4.2.tar.gz' 2021-10-01T23:10:39.9066206Z Content type 'binary/octet-stream' length 493580 bytes (482 KB) 2021-10-01T23:10:39.9145806Z ================================================== 2021-10-01T23:10:39.9146575Z downloaded 482 KB 2021-10-01T23:10:39.9147026Z 2021-10-01T23:10:39.9191538Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gitcreds_0.1.1.tar.gz' 2021-10-01T23:10:40.5287003Z Content type 'binary/octet-stream' length 92952 bytes (90 KB) 2021-10-01T23:10:40.5320805Z ================================================== 2021-10-01T23:10:40.5321399Z downloaded 90 KB 2021-10-01T23:10:40.5321721Z 2021-10-01T23:10:40.5364826Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cli_3.0.1.tar.gz' 2021-10-01T23:10:41.1424572Z Content type 'binary/octet-stream' length 718430 bytes (701 KB) 2021-10-01T23:10:41.1504308Z ================================================== 2021-10-01T23:10:41.1504989Z downloaded 701 KB 2021-10-01T23:10:41.1505316Z 2021-10-01T23:10:41.1548357Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/zip_2.2.0.tar.gz' 2021-10-01T23:10:42.5622693Z Content type 'binary/octet-stream' length 636548 bytes (621 KB) 2021-10-01T23:10:42.5696816Z ================================================== 2021-10-01T23:10:42.5697653Z downloaded 621 KB 2021-10-01T23:10:42.5698410Z 2021-10-01T23:10:42.5736927Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rstudioapi_0.13.tar.gz' 2021-10-01T23:10:43.3262188Z Content type 'binary/octet-stream' length 272111 bytes (265 KB) 2021-10-01T23:10:43.3305131Z ================================================== 2021-10-01T23:10:43.3306155Z downloaded 265 KB 2021-10-01T23:10:43.3306706Z 2021-10-01T23:10:43.3345875Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/credentials_1.3.1.tar.gz' 2021-10-01T23:10:43.9907136Z Content type 'binary/octet-stream' length 171645 bytes (167 KB) 2021-10-01T23:10:44.0164701Z ================================================== 2021-10-01T23:10:44.0165571Z downloaded 167 KB 2021-10-01T23:10:44.0166005Z 2021-10-01T23:10:44.0209147Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fastmap_1.1.0.tar.gz' 2021-10-01T23:10:44.5433784Z Content type 'binary/octet-stream' length 240708 bytes (235 KB) 2021-10-01T23:10:44.5478964Z ================================================== 2021-10-01T23:10:44.5480446Z downloaded 235 KB 2021-10-01T23:10:44.5481270Z 2021-10-01T23:10:44.5522121Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/yaml_2.2.1.tar.gz' 2021-10-01T23:10:45.2075679Z Content type 'binary/octet-stream' length 283501 bytes (276 KB) 2021-10-01T23:10:45.2122709Z ================================================== 2021-10-01T23:10:45.2123541Z downloaded 276 KB 2021-10-01T23:10:45.2123998Z 2021-10-01T23:10:45.2171206Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/withr_2.4.2.tar.gz' 2021-10-01T23:10:46.2251353Z Content type 'binary/octet-stream' length 207784 bytes (202 KB) 2021-10-01T23:10:46.2291473Z ================================================== 2021-10-01T23:10:46.2292415Z downloaded 202 KB 2021-10-01T23:10:46.2293010Z 2021-10-01T23:10:46.2370825Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/whisker_0.4.tar.gz' 2021-10-01T23:10:47.0914285Z Content type 'binary/octet-stream' length 65438 bytes (63 KB) 2021-10-01T23:10:47.0915133Z ================================================== 2021-10-01T23:10:47.0915689Z downloaded 63 KB 2021-10-01T23:10:47.0916009Z 2021-10-01T23:10:47.0968895Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rappdirs_0.3.3.tar.gz' 2021-10-01T23:10:47.7892043Z Content type 'binary/octet-stream' length 47021 bytes (45 KB) 2021-10-01T23:10:47.7893469Z ================================================== 2021-10-01T23:10:47.7894492Z downloaded 45 KB 2021-10-01T23:10:47.7894931Z 2021-10-01T23:10:47.7932383Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/purrr_0.3.4.tar.gz' 2021-10-01T23:10:48.4671770Z Content type 'binary/octet-stream' length 425353 bytes (415 KB) 2021-10-01T23:10:48.4733604Z ================================================== 2021-10-01T23:10:48.4734401Z downloaded 415 KB 2021-10-01T23:10:48.4734844Z 2021-10-01T23:10:48.4783482Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lifecycle_1.0.1.tar.gz' 2021-10-01T23:10:49.3865632Z Content type 'binary/octet-stream' length 104882 bytes (102 KB) 2021-10-01T23:10:49.3880094Z ================================================== 2021-10-01T23:10:49.3881066Z downloaded 102 KB 2021-10-01T23:10:49.3881612Z 2021-10-01T23:10:49.3928978Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gh_1.3.0.tar.gz' 2021-10-01T23:10:50.0478377Z Content type 'binary/octet-stream' length 136080 bytes (132 KB) 2021-10-01T23:10:50.0505614Z ================================================== 2021-10-01T23:10:50.0506554Z downloaded 132 KB 2021-10-01T23:10:50.0507110Z 2021-10-01T23:10:50.0547390Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gert_1.4.1.tar.gz' 2021-10-01T23:10:51.1615768Z Content type 'binary/octet-stream' length 277934 bytes (271 KB) 2021-10-01T23:10:51.1822318Z ================================================== 2021-10-01T23:10:51.1823216Z downloaded 271 KB 2021-10-01T23:10:51.1823713Z 2021-10-01T23:10:51.1874680Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fs_1.5.0.tar.gz' 2021-10-01T23:10:51.9291725Z Content type 'binary/octet-stream' length 753885 bytes (736 KB) 2021-10-01T23:10:51.9438038Z ================================================== 2021-10-01T23:10:51.9438679Z downloaded 736 KB 2021-10-01T23:10:51.9438985Z 2021-10-01T23:10:51.9484089Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/clipr_0.7.1.tar.gz' 2021-10-01T23:10:52.6041747Z Content type 'binary/octet-stream' length 47030 bytes (45 KB) 2021-10-01T23:10:52.6043085Z ================================================== 2021-10-01T23:10:52.6043738Z downloaded 45 KB 2021-10-01T23:10:52.6044181Z 2021-10-01T23:10:52.6085125Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cachem_1.0.6.tar.gz' 2021-10-01T23:10:53.1906174Z Content type 'binary/octet-stream' length 69019 bytes (67 KB) 2021-10-01T23:10:53.1925581Z ================================================== 2021-10-01T23:10:53.1926505Z downloaded 67 KB 2021-10-01T23:10:53.1927074Z 2021-10-01T23:10:53.1998123Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/usethis_2.0.1.tar.gz' 2021-10-01T23:10:53.8558291Z Content type 'binary/octet-stream' length 701189 bytes (684 KB) 2021-10-01T23:10:53.8731178Z ================================================== 2021-10-01T23:10:53.8731865Z downloaded 684 KB 2021-10-01T23:10:53.8732196Z 2021-10-01T23:10:53.8777052Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/memoise_2.0.0.tar.gz' 2021-10-01T23:10:54.5330164Z Content type 'binary/octet-stream' length 46738 bytes (45 KB) 2021-10-01T23:10:54.5331809Z ================================================== 2021-10-01T23:10:54.5332574Z downloaded 45 KB 2021-10-01T23:10:54.5333083Z 2021-10-01T23:10:54.5374102Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/git2r_0.28.0.tar.gz' 2021-10-01T23:10:55.2400432Z Content type 'binary/octet-stream' length 613293 bytes (598 KB) 2021-10-01T23:10:55.2924561Z ================================================== 2021-10-01T23:10:55.2925752Z downloaded 598 KB 2021-10-01T23:10:55.2926087Z 2021-10-01T23:10:55.6065590Z * installing *binary* package ‘rlang’ ... 2021-10-01T23:10:55.6171789Z * DONE (rlang) 2021-10-01T23:10:55.8684380Z * installing *binary* package ‘magrittr’ ... 2021-10-01T23:10:55.8738016Z * DONE (magrittr) 2021-10-01T23:10:56.1175247Z * installing *binary* package ‘glue’ ... 2021-10-01T23:10:56.1226859Z * DONE (glue) 2021-10-01T23:10:56.3459306Z * installing *binary* package ‘sys’ ... 2021-10-01T23:10:56.3505734Z * DONE (sys) 2021-10-01T23:10:56.5794210Z * installing *binary* package ‘mime’ ... 2021-10-01T23:10:56.5837995Z * DONE (mime) 2021-10-01T23:10:56.9195389Z * installing *binary* package ‘curl’ ... 2021-10-01T23:10:56.9276268Z * DONE (curl) 2021-10-01T23:10:57.1960238Z * installing *binary* package ‘jsonlite’ ... 2021-10-01T23:10:57.2028906Z * DONE (jsonlite) 2021-10-01T23:10:57.4273025Z * installing *binary* package ‘ini’ ... 2021-10-01T23:10:57.4317453Z * DONE (ini) 2021-10-01T23:10:57.6720625Z * installing *binary* package ‘gitcreds’ ... 2021-10-01T23:10:57.6770724Z * DONE (gitcreds) 2021-10-01T23:10:57.9777742Z * installing *binary* package ‘zip’ ... 2021-10-01T23:10:57.9848557Z * DONE (zip) 2021-10-01T23:10:58.2341543Z * installing *binary* package ‘rstudioapi’ ... 2021-10-01T23:10:58.2400427Z * DONE (rstudioapi) 2021-10-01T23:10:58.4942921Z * installing *binary* package ‘fastmap’ ... 2021-10-01T23:10:58.5000145Z * DONE (fastmap) 2021-10-01T23:10:58.7664964Z * installing *binary* package ‘yaml’ ... 2021-10-01T23:10:58.7746085Z * DONE (yaml) 2021-10-01T23:10:59.0125775Z * installing *binary* package ‘withr’ ... 2021-10-01T23:10:59.0174364Z * DONE (withr) 2021-10-01T23:10:59.2619815Z * installing *binary* package ‘whisker’ ... 2021-10-01T23:10:59.2669732Z * DONE (whisker) 2021-10-01T23:10:59.4880332Z * installing *binary* package ‘rappdirs’ ... 2021-10-01T23:10:59.4926082Z * DONE (rappdirs) 2021-10-01T23:10:59.7947296Z * installing *binary* package ‘fs’ ... 2021-10-01T23:10:59.8009193Z * DONE (fs) 2021-10-01T23:11:00.0253727Z * installing *binary* package ‘clipr’ ... 2021-10-01T23:11:00.0304756Z * DONE (clipr) 2021-10-01T23:11:00.3040912Z * installing *binary* package ‘git2r’ ... 2021-10-01T23:11:00.3099785Z * DONE (git2r) 2021-10-01T23:11:00.5296761Z * installing *binary* package ‘askpass’ ... 2021-10-01T23:11:00.5348127Z * DONE (askpass) 2021-10-01T23:11:00.8017037Z * installing *binary* package ‘cli’ ... 2021-10-01T23:11:00.8079297Z * DONE (cli) 2021-10-01T23:11:01.0570589Z * installing *binary* package ‘purrr’ ... 2021-10-01T23:11:01.0625865Z * DONE (purrr) 2021-10-01T23:11:01.3050918Z * installing *binary* package ‘lifecycle’ ... 2021-10-01T23:11:01.3104192Z * DONE (lifecycle) 2021-10-01T23:11:01.5304058Z * installing *binary* package ‘cachem’ ... 2021-10-01T23:11:01.5358029Z * DONE (cachem) 2021-10-01T23:11:01.8987858Z * installing *binary* package ‘openssl’ ... 2021-10-01T23:11:01.9074003Z * DONE (openssl) 2021-10-01T23:11:02.1365669Z * installing *binary* package ‘memoise’ ... 2021-10-01T23:11:02.1410369Z * DONE (memoise) 2021-10-01T23:11:02.3991653Z * installing *binary* package ‘httr’ ... 2021-10-01T23:11:02.4051250Z * DONE (httr) 2021-10-01T23:11:02.6452049Z * installing *binary* package ‘credentials’ ... 2021-10-01T23:11:02.6499175Z * DONE (credentials) 2021-10-01T23:11:02.8889974Z * installing *binary* package ‘gh’ ... 2021-10-01T23:11:02.8986605Z * DONE (gh) 2021-10-01T23:11:03.1409201Z * installing *binary* package ‘gert’ ... 2021-10-01T23:11:03.1460149Z * DONE (gert) 2021-10-01T23:11:03.4370829Z * installing *binary* package ‘usethis’ ... 2021-10-01T23:11:03.4446644Z * DONE (usethis) 2021-10-01T23:11:03.4518453Z 2021-10-01T23:11:03.4519460Z The downloaded source packages are in 2021-10-01T23:11:03.4521021Z ‘/tmp/RtmppFXH44/downloaded_packages’ 2021-10-01T23:11:03.4538142Z Running `R CMD build`... 2021-10-01T23:11:03.9220436Z * checking for file ‘/tmp/RtmppFXH44/remotes98713dc8ea7b/ropensci-tic-ee53e95/DESCRIPTION’ ... OK 2021-10-01T23:11:03.9222092Z * preparing ‘tic’: 2021-10-01T23:11:03.9223162Z * checking DESCRIPTION meta-information ... OK 2021-10-01T23:11:03.9224581Z * checking for LF line-endings in source and make files and shell scripts 2021-10-01T23:11:03.9226626Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:11:03.9227774Z * checking for empty or unneeded directories 2021-10-01T23:11:03.9229495Z (as ‘lib’ is unspecified) 2021-10-01T23:11:03.9230322Z Removed empty directory ‘tic/.circleci’ 2021-10-01T23:11:03.9232297Z Removed empty directory ‘tic/pkgdown’ 2021-10-01T23:11:03.9233183Z * building ‘tic_0.11.1.tar.gz’ 2021-10-01T23:11:04.2624108Z * installing *source* package ‘tic’ ... 2021-10-01T23:11:04.2918132Z ** R 2021-10-01T23:11:04.3175610Z ** inst 2021-10-01T23:11:04.3219096Z ** preparing package for lazy loading 2021-10-01T23:11:04.5281630Z ** help 2021-10-01T23:11:04.6904245Z *** installing help indices 2021-10-01T23:11:04.8383738Z *** copying figures 2021-10-01T23:11:04.8390254Z ** building package indices 2021-10-01T23:11:04.9844656Z ** installing vignettes 2021-10-01T23:11:04.9876787Z ** testing if installed package can be loaded 2021-10-01T23:11:05.2601718Z * DONE (tic) 2021-10-01T23:11:05.2760991Z Using github PAT from envvar GITHUB_PAT 2021-10-01T23:11:05.4697345Z Downloading GitHub repo muschellij2/ghtravis@HEAD 2021-10-01T23:11:07.6467311Z desc (1.4.0 -> 7be86f2f7...) [GitHub] 2021-10-01T23:11:07.6469062Z utf8 (NA -> 1.2.2 ) [CRAN] 2021-10-01T23:11:07.6470169Z vctrs (NA -> 0.3.8 ) [CRAN] 2021-10-01T23:11:07.6472669Z Installing 36 packages: utf8, vctrs, pkgconfig, pillar, tibble, rematch2, fansi, diffobj, waldo, ps, processx, praise, pkgload, evaluate, ellipsis, digest, callr, brio, xml2, xfun, highr, cpp11, stringr, stringi, knitr, commonmark, brew, xopen, sessioninfo, prettyunits, pkgbuild, testthat, rversions, roxygen2, rcmdcheck, devtools 2021-10-01T23:11:07.6475069Z pkgconfig (NA -> 2.0.3 ) [CRAN] 2021-10-01T23:11:07.6476126Z pillar (NA -> 1.6.3 ) [CRAN] 2021-10-01T23:11:07.6477265Z tibble (NA -> 3.1.5 ) [CRAN] 2021-10-01T23:11:07.6478243Z rematch2 (NA -> 2.1.2 ) [CRAN] 2021-10-01T23:11:07.6479229Z fansi (NA -> 0.5.0 ) [CRAN] 2021-10-01T23:11:07.6480245Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:11:07.6481139Z (as ‘lib’ is unspecified) 2021-10-01T23:11:07.6482170Z diffobj (NA -> 0.3.4 ) [CRAN] 2021-10-01T23:11:07.6483148Z waldo (NA -> 0.3.1 ) [CRAN] 2021-10-01T23:11:07.6484105Z ps (NA -> 1.6.0 ) [CRAN] 2021-10-01T23:11:07.6485056Z processx (NA -> 3.5.2 ) [CRAN] 2021-10-01T23:11:07.6486045Z praise (NA -> 1.0.0 ) [CRAN] 2021-10-01T23:11:07.6487028Z pkgload (NA -> 1.2.2 ) [CRAN] 2021-10-01T23:11:07.6488014Z evaluate (NA -> 0.14 ) [CRAN] 2021-10-01T23:11:07.6489855Z ellipsis (NA -> 0.3.2 ) [CRAN] 2021-10-01T23:11:07.6490833Z digest (NA -> 0.6.28 ) [CRAN] 2021-10-01T23:11:07.6491786Z callr (NA -> 3.7.0 ) [CRAN] 2021-10-01T23:11:07.6492666Z brio (NA -> 1.1.2 ) [CRAN] 2021-10-01T23:11:07.6493516Z xml2 (NA -> 1.3.2 ) [CRAN] 2021-10-01T23:11:07.6494384Z xfun (NA -> 0.26 ) [CRAN] 2021-10-01T23:11:07.6495276Z highr (NA -> 0.9 ) [CRAN] 2021-10-01T23:11:07.6496154Z cpp11 (NA -> 0.4.0 ) [CRAN] 2021-10-01T23:11:07.6497061Z stringr (NA -> 1.4.0 ) [CRAN] 2021-10-01T23:11:07.6498279Z stringi (NA -> 1.7.4 ) [CRAN] 2021-10-01T23:11:07.6499199Z knitr (NA -> 1.36 ) [CRAN] 2021-10-01T23:11:07.6500076Z commonmark (NA -> 1.7 ) [CRAN] 2021-10-01T23:11:07.6500974Z brew (NA -> 1.0-6 ) [CRAN] 2021-10-01T23:11:07.6501851Z xopen (NA -> 1.0.0 ) [CRAN] 2021-10-01T23:11:07.6502746Z sessioninfo (NA -> 1.1.1 ) [CRAN] 2021-10-01T23:11:07.6503694Z prettyunits (NA -> 1.1.1 ) [CRAN] 2021-10-01T23:11:07.6504625Z pkgbuild (NA -> 1.2.0 ) [CRAN] 2021-10-01T23:11:07.6505528Z testthat (NA -> 3.0.4 ) [CRAN] 2021-10-01T23:11:07.6506415Z rversions (NA -> 2.1.1 ) [CRAN] 2021-10-01T23:11:07.6507346Z roxygen2 (NA -> 7.1.2 ) [CRAN] 2021-10-01T23:11:07.6508673Z rcmdcheck (NA -> 1.4.0 ) [CRAN] 2021-10-01T23:11:07.6509562Z devtools (NA -> 2.4.2 ) [CRAN] 2021-10-01T23:11:23.4588498Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/utf8_1.2.2.tar.gz' 2021-10-01T23:11:24.1143874Z Content type 'binary/octet-stream' length 237260 bytes (231 KB) 2021-10-01T23:11:24.1181438Z ================================================== 2021-10-01T23:11:24.1182424Z downloaded 231 KB 2021-10-01T23:11:24.1182988Z 2021-10-01T23:11:24.1239171Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/vctrs_0.3.8.tar.gz' 2021-10-01T23:11:24.7996039Z Content type 'binary/octet-stream' length 1609764 bytes (1.5 MB) 2021-10-01T23:11:24.8136680Z ================================================== 2021-10-01T23:11:24.8138869Z downloaded 1.5 MB 2021-10-01T23:11:24.8139803Z 2021-10-01T23:11:24.8176810Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgconfig_2.0.3.tar.gz' 2021-10-01T23:11:25.5431180Z Content type 'binary/octet-stream' length 17479 bytes (17 KB) 2021-10-01T23:11:25.5432765Z ================================================== 2021-10-01T23:11:25.5433500Z downloaded 17 KB 2021-10-01T23:11:25.5434048Z 2021-10-01T23:11:25.5469819Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pillar_1.6.3.tar.gz' 2021-10-01T23:11:26.2032600Z Content type 'binary/octet-stream' length 1054330 bytes (1.0 MB) 2021-10-01T23:11:26.2219764Z ================================================== 2021-10-01T23:11:26.2221651Z downloaded 1.0 MB 2021-10-01T23:11:26.2222612Z 2021-10-01T23:11:26.2255535Z trying URL 'https://cloud.r-project.org/src/contrib/tibble_3.1.5.tar.gz' 2021-10-01T23:11:26.3500349Z Content type 'application/x-gzip' length 739036 bytes (721 KB) 2021-10-01T23:11:26.3708430Z ================================================== 2021-10-01T23:11:26.3709763Z downloaded 721 KB 2021-10-01T23:11:26.3710314Z 2021-10-01T23:11:26.3738748Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rematch2_2.1.2.tar.gz' 2021-10-01T23:11:27.4288327Z Content type 'binary/octet-stream' length 44291 bytes (43 KB) 2021-10-01T23:11:27.4294634Z ================================================== 2021-10-01T23:11:27.4297693Z downloaded 43 KB 2021-10-01T23:11:27.4300868Z 2021-10-01T23:11:27.4337594Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fansi_0.5.0.tar.gz' 2021-10-01T23:11:28.2312352Z Content type 'binary/octet-stream' length 281127 bytes (274 KB) 2021-10-01T23:11:28.2408716Z ================================================== 2021-10-01T23:11:28.2409787Z downloaded 274 KB 2021-10-01T23:11:28.2410338Z 2021-10-01T23:11:28.2455391Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/diffobj_0.3.4.tar.gz' 2021-10-01T23:11:30.2508303Z Content type 'binary/octet-stream' length 991857 bytes (968 KB) 2021-10-01T23:11:30.2751221Z ================================================== 2021-10-01T23:11:30.2752462Z downloaded 968 KB 2021-10-01T23:11:30.2753028Z 2021-10-01T23:11:30.2789504Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/waldo_0.3.1.tar.gz' 2021-10-01T23:11:30.8424070Z Content type 'binary/octet-stream' length 92866 bytes (90 KB) 2021-10-01T23:11:30.8453822Z ================================================== 2021-10-01T23:11:30.8454775Z downloaded 90 KB 2021-10-01T23:11:30.8455305Z 2021-10-01T23:11:30.8497020Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ps_1.6.0.tar.gz' 2021-10-01T23:11:31.7095831Z Content type 'binary/octet-stream' length 358371 bytes (349 KB) 2021-10-01T23:11:31.7249596Z ================================================== 2021-10-01T23:11:31.7250445Z downloaded 349 KB 2021-10-01T23:11:31.7250773Z 2021-10-01T23:11:31.7292415Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/processx_3.5.2.tar.gz' 2021-10-01T23:11:32.3834191Z Content type 'binary/octet-stream' length 421402 bytes (411 KB) 2021-10-01T23:11:32.3887126Z ================================================== 2021-10-01T23:11:32.3888766Z downloaded 411 KB 2021-10-01T23:11:32.3889721Z 2021-10-01T23:11:32.3931283Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/praise_1.0.0.tar.gz' 2021-10-01T23:11:33.0483848Z Content type 'binary/octet-stream' length 15806 bytes (15 KB) 2021-10-01T23:11:33.0484952Z ================================================== 2021-10-01T23:11:33.0485447Z downloaded 15 KB 2021-10-01T23:11:33.0485762Z 2021-10-01T23:11:33.0527227Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgload_1.2.2.tar.gz' 2021-10-01T23:11:33.6971033Z Content type 'binary/octet-stream' length 149702 bytes (146 KB) 2021-10-01T23:11:33.7002690Z ================================================== 2021-10-01T23:11:33.7003752Z downloaded 146 KB 2021-10-01T23:11:33.7004323Z 2021-10-01T23:11:33.7048711Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/evaluate_0.14.tar.gz' 2021-10-01T23:11:34.3515818Z Content type 'binary/octet-stream' length 73484 bytes (71 KB) 2021-10-01T23:11:34.3531768Z ================================================== 2021-10-01T23:11:34.3533159Z downloaded 71 KB 2021-10-01T23:11:34.3533758Z 2021-10-01T23:11:34.3588251Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ellipsis_0.3.2.tar.gz' 2021-10-01T23:11:35.0144888Z Content type 'binary/octet-stream' length 40044 bytes (39 KB) 2021-10-01T23:11:35.0146421Z ================================================== 2021-10-01T23:11:35.0147168Z downloaded 39 KB 2021-10-01T23:11:35.0147690Z 2021-10-01T23:11:35.0184953Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/digest_0.6.28.tar.gz' 2021-10-01T23:11:35.5869679Z Content type 'binary/octet-stream' length 358321 bytes (349 KB) 2021-10-01T23:11:35.6244997Z ================================================== 2021-10-01T23:11:35.6247026Z downloaded 349 KB 2021-10-01T23:11:35.6247995Z 2021-10-01T23:11:35.6282365Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/callr_3.7.0.tar.gz' 2021-10-01T23:11:36.2842335Z Content type 'binary/octet-stream' length 433269 bytes (423 KB) 2021-10-01T23:11:36.2906104Z ================================================== 2021-10-01T23:11:36.2907284Z downloaded 423 KB 2021-10-01T23:11:36.2907997Z 2021-10-01T23:11:36.2951659Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brio_1.1.2.tar.gz' 2021-10-01T23:11:37.3501688Z Content type 'binary/octet-stream' length 42047 bytes (41 KB) 2021-10-01T23:11:37.3503312Z ================================================== 2021-10-01T23:11:37.3504232Z downloaded 41 KB 2021-10-01T23:11:37.3504783Z 2021-10-01T23:11:37.3551480Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xml2_1.3.2.tar.gz' 2021-10-01T23:11:37.9590492Z Content type 'binary/octet-stream' length 617634 bytes (603 KB) 2021-10-01T23:11:37.9685219Z ================================================== 2021-10-01T23:11:37.9685836Z downloaded 603 KB 2021-10-01T23:11:37.9686159Z 2021-10-01T23:11:37.9726997Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xfun_0.26.tar.gz' 2021-10-01T23:11:38.6288208Z Content type 'binary/octet-stream' length 344853 bytes (336 KB) 2021-10-01T23:11:38.6354371Z ================================================== 2021-10-01T23:11:38.6355342Z downloaded 336 KB 2021-10-01T23:11:38.6355906Z 2021-10-01T23:11:38.6409911Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/highr_0.9.tar.gz' 2021-10-01T23:11:39.2713676Z Content type 'binary/octet-stream' length 38652 bytes (37 KB) 2021-10-01T23:11:39.2819225Z ================================================== 2021-10-01T23:11:39.2819869Z downloaded 37 KB 2021-10-01T23:11:39.2820192Z 2021-10-01T23:11:39.2861483Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cpp11_0.4.0.tar.gz' 2021-10-01T23:11:40.2412717Z Content type 'binary/octet-stream' length 304637 bytes (297 KB) 2021-10-01T23:11:40.2478017Z ================================================== 2021-10-01T23:11:40.2478639Z downloaded 297 KB 2021-10-01T23:11:40.2478962Z 2021-10-01T23:11:40.2521650Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringr_1.4.0.tar.gz' 2021-10-01T23:11:41.0070237Z Content type 'binary/octet-stream' length 205226 bytes (200 KB) 2021-10-01T23:11:41.0108869Z ================================================== 2021-10-01T23:11:41.0109557Z downloaded 200 KB 2021-10-01T23:11:41.0109915Z 2021-10-01T23:11:41.0159257Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringi_1.7.4.tar.gz' 2021-10-01T23:11:41.9303461Z Content type 'binary/octet-stream' length 3221734 bytes (3.1 MB) 2021-10-01T23:11:42.0846357Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brew_1.0-6.tar.gz' 2021-10-01T23:11:43.8880164Z Content type 'binary/octet-stream' length 109619 bytes (107 KB) 2021-10-01T23:11:43.8928724Z ================================================== 2021-10-01T23:11:43.8929357Z downloaded 107 KB 2021-10-01T23:11:43.8929683Z 2021-10-01T23:11:43.8983324Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xopen_1.0.0.tar.gz' 2021-10-01T23:11:44.5557335Z Content type 'binary/octet-stream' length 22203 bytes (21 KB) 2021-10-01T23:11:44.5558709Z ================================================== 2021-10-01T23:11:44.5559564Z downloaded 21 KB 2021-10-01T23:11:44.5560126Z 2021-10-01T23:11:44.5599452Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sessioninfo_1.1.1.tar.gz' 2021-10-01T23:11:45.6149175Z Content type 'binary/octet-stream' length 43717 bytes (42 KB) 2021-10-01T23:11:45.6150789Z ================================================== 2021-10-01T23:11:45.6152190Z downloaded 42 KB 2021-10-01T23:11:45.6152927Z 2021-10-01T23:11:45.6211625Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/prettyunits_1.1.1.tar.gz' 2021-10-01T23:11:46.2272993Z Content type 'binary/octet-stream' length 34301 bytes (33 KB) 2021-10-01T23:11:46.2274511Z ================================================== 2021-10-01T23:11:46.2275588Z downloaded 33 KB 2021-10-01T23:11:46.2275967Z 2021-10-01T23:11:46.2316250Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgbuild_1.2.0.tar.gz' 2021-10-01T23:11:48.1766347Z Content type 'binary/octet-stream' length 138624 bytes (135 KB) 2021-10-01T23:11:48.1791521Z ================================================== 2021-10-01T23:11:48.1792655Z downloaded 135 KB 2021-10-01T23:11:48.1793225Z 2021-10-01T23:11:48.1830236Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/testthat_3.0.4.tar.gz' 2021-10-01T23:11:48.8766498Z Content type 'binary/octet-stream' length 3545061 bytes (3.4 MB) 2021-10-01T23:11:48.9534947Z ================================================== 2021-10-01T23:11:48.9536639Z downloaded 3.4 MB 2021-10-01T23:11:48.9537206Z 2021-10-01T23:11:48.9576100Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rversions_2.1.1.tar.gz' 2021-10-01T23:11:49.5634392Z Content type 'binary/octet-stream' length 63927 bytes (62 KB) 2021-10-01T23:11:49.5636767Z ================================================== 2021-10-01T23:11:49.5637968Z downloaded 62 KB 2021-10-01T23:11:49.5639250Z 2021-10-01T23:11:49.5684226Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/roxygen2_7.1.2.tar.gz' 2021-10-01T23:11:50.2237197Z Content type 'binary/octet-stream' length 1012299 bytes (988 KB) 2021-10-01T23:11:50.2335211Z ================================================== 2021-10-01T23:11:50.2336263Z downloaded 988 KB 2021-10-01T23:11:50.2337005Z 2021-10-01T23:11:50.2373905Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rcmdcheck_1.4.0.tar.gz' 2021-10-01T23:11:50.8225865Z Content type 'binary/octet-stream' length 167131 bytes (163 KB) 2021-10-01T23:11:50.8260496Z ================================================== 2021-10-01T23:11:50.8261425Z downloaded 163 KB 2021-10-01T23:11:50.8409039Z 2021-10-01T23:11:50.8411242Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/devtools_2.4.2.tar.gz' 2021-10-01T23:11:51.4690123Z Content type 'binary/octet-stream' length 393453 bytes (384 KB) 2021-10-01T23:11:51.4805987Z ================================================== 2021-10-01T23:11:51.4806620Z downloaded 384 KB 2021-10-01T23:11:51.4806946Z 2021-10-01T23:11:51.7352146Z * installing *binary* package ‘utf8’ ... 2021-10-01T23:11:51.7405588Z * DONE (utf8) 2021-10-01T23:11:51.9566291Z * installing *binary* package ‘pkgconfig’ ... 2021-10-01T23:11:51.9621511Z * DONE (pkgconfig) 2021-10-01T23:11:52.2112490Z * installing *binary* package ‘fansi’ ... 2021-10-01T23:11:52.2176991Z * DONE (fansi) 2021-10-01T23:11:52.4924561Z * installing *binary* package ‘diffobj’ ... 2021-10-01T23:11:52.4995504Z * DONE (diffobj) 2021-10-01T23:11:52.7560423Z * installing *binary* package ‘ps’ ... 2021-10-01T23:11:52.7637380Z * DONE (ps) 2021-10-01T23:11:52.9894887Z * installing *binary* package ‘praise’ ... 2021-10-01T23:11:52.9941258Z * DONE (praise) 2021-10-01T23:11:53.2162395Z * installing *binary* package ‘pkgload’ ... 2021-10-01T23:11:53.2206542Z * DONE (pkgload) 2021-10-01T23:11:53.4385316Z * installing *binary* package ‘evaluate’ ... 2021-10-01T23:11:53.4438885Z * DONE (evaluate) 2021-10-01T23:11:53.6641574Z * installing *binary* package ‘ellipsis’ ... 2021-10-01T23:11:53.6686056Z * DONE (ellipsis) 2021-10-01T23:11:53.9353300Z * installing *binary* package ‘digest’ ... 2021-10-01T23:11:53.9415306Z * DONE (digest) 2021-10-01T23:11:54.1622926Z * installing *binary* package ‘brio’ ... 2021-10-01T23:11:54.1666970Z * DONE (brio) 2021-10-01T23:11:54.4636744Z * installing *binary* package ‘xml2’ ... 2021-10-01T23:11:54.4701733Z * DONE (xml2) 2021-10-01T23:11:54.7199089Z * installing *binary* package ‘xfun’ ... 2021-10-01T23:11:54.7259211Z * DONE (xfun) 2021-10-01T23:11:55.0031347Z * installing *binary* package ‘cpp11’ ... 2021-10-01T23:11:55.0116739Z * DONE (cpp11) 2021-10-01T23:11:55.5085207Z * installing *binary* package ‘stringi’ ... 2021-10-01T23:11:55.5275271Z * DONE (stringi) 2021-10-01T23:11:55.8050674Z * installing *binary* package ‘commonmark’ ... 2021-10-01T23:11:55.8108422Z * DONE (commonmark) 2021-10-01T23:11:56.0730010Z * installing *binary* package ‘brew’ ... 2021-10-01T23:11:56.0790234Z * DONE (brew) 2021-10-01T23:11:56.3164510Z * installing *binary* package ‘sessioninfo’ ... 2021-10-01T23:11:56.3225105Z * DONE (sessioninfo) 2021-10-01T23:11:56.5543326Z * installing *binary* package ‘prettyunits’ ... 2021-10-01T23:11:56.5595511Z * DONE (prettyunits) 2021-10-01T23:11:56.9171176Z * installing *binary* package ‘vctrs’ ... 2021-10-01T23:11:56.9286980Z * DONE (vctrs) 2021-10-01T23:11:57.1918391Z * installing *binary* package ‘processx’ ... 2021-10-01T23:11:57.1986657Z * DONE (processx) 2021-10-01T23:11:57.4223580Z * installing *binary* package ‘highr’ ... 2021-10-01T23:11:57.4296813Z * DONE (highr) 2021-10-01T23:11:57.6823565Z * installing *binary* package ‘stringr’ ... 2021-10-01T23:11:57.6878738Z * DONE (stringr) 2021-10-01T23:11:57.9143249Z * installing *binary* package ‘rversions’ ... 2021-10-01T23:11:57.9192073Z * DONE (rversions) 2021-10-01T23:11:58.2311260Z * installing *binary* package ‘pillar’ ... 2021-10-01T23:11:58.2383668Z * DONE (pillar) 2021-10-01T23:11:58.4799442Z * installing *binary* package ‘callr’ ... 2021-10-01T23:11:58.4868796Z * DONE (callr) 2021-10-01T23:11:58.8795231Z * installing *binary* package ‘knitr’ ... 2021-10-01T23:11:58.8924675Z * DONE (knitr) 2021-10-01T23:11:59.1139432Z * installing *binary* package ‘xopen’ ... 2021-10-01T23:11:59.1187442Z * DONE (xopen) 2021-10-01T23:11:59.5545718Z * installing *source* package ‘tibble’ ... 2021-10-01T23:11:59.5668203Z ** package ‘tibble’ successfully unpacked and MD5 sums checked 2021-10-01T23:11:59.5901866Z ** libs 2021-10-01T23:11:59.5976545Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c attributes.c -o attributes.o 2021-10-01T23:12:00.1825914Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-10-01T23:12:00.3606066Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-10-01T23:12:00.4040287Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c matrixToDataFrame.c -o matrixToDataFrame.o 2021-10-01T23:12:00.5154136Z gcc -shared -L/opt/R/3.5.3/lib/R/lib -L/usr/local/lib -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o -L/opt/R/3.5.3/lib/R/lib -lR 2021-10-01T23:12:00.5585162Z installing to /home/runner/work/_temp/Library/tibble/libs 2021-10-01T23:12:00.5627434Z ** R 2021-10-01T23:12:00.5869831Z ** inst 2021-10-01T23:12:00.5913053Z ** byte-compile and prepare package for lazy loading 2021-10-01T23:12:02.3044165Z ** help 2021-10-01T23:12:02.3868667Z *** installing help indices 2021-10-01T23:12:02.4424176Z *** copying figures 2021-10-01T23:12:02.4428307Z ** building package indices 2021-10-01T23:12:02.4933095Z ** installing vignettes 2021-10-01T23:12:02.4989861Z ** testing if installed package can be loaded 2021-10-01T23:12:02.8467283Z * DONE (tibble) 2021-10-01T23:12:03.1052466Z * installing *binary* package ‘pkgbuild’ ... 2021-10-01T23:12:03.1098568Z * DONE (pkgbuild) 2021-10-01T23:12:03.4254386Z * installing *binary* package ‘roxygen2’ ... 2021-10-01T23:12:03.4328615Z * DONE (roxygen2) 2021-10-01T23:12:03.6581545Z * installing *binary* package ‘rematch2’ ... 2021-10-01T23:12:03.6659265Z * DONE (rematch2) 2021-10-01T23:12:03.8994306Z * installing *binary* package ‘rcmdcheck’ ... 2021-10-01T23:12:03.9043154Z * DONE (rcmdcheck) 2021-10-01T23:12:04.1403470Z * installing *binary* package ‘waldo’ ... 2021-10-01T23:12:04.1456775Z * DONE (waldo) 2021-10-01T23:12:04.7359338Z * installing *binary* package ‘testthat’ ... 2021-10-01T23:12:04.7510145Z * DONE (testthat) 2021-10-01T23:12:05.0044936Z * installing *binary* package ‘devtools’ ... 2021-10-01T23:12:05.0098770Z * DONE (devtools) 2021-10-01T23:12:05.0188453Z 2021-10-01T23:12:05.0189719Z The downloaded source packages are in 2021-10-01T23:12:05.0191491Z ‘/tmp/RtmppFXH44/downloaded_packages’ 2021-10-01T23:12:05.0895019Z Downloading GitHub repo muschellij2/desc@HEAD 2021-10-01T23:12:07.0649445Z 2021-10-01T23:12:07.4019703Z 2021-10-01T23:12:07.4025037Z checking for file ‘/tmp/RtmppFXH44/remotes987113e4230b/muschellij2-desc-7be86f2/DESCRIPTION’ ... 2021-10-01T23:12:07.4091693Z 2021-10-01T23:12:07.4093676Z ✔ checking for file ‘/tmp/RtmppFXH44/remotes987113e4230b/muschellij2-desc-7be86f2/DESCRIPTION’ 2021-10-01T23:12:07.4259293Z 2021-10-01T23:12:07.4268739Z 2021-10-01T23:12:07.4271187Z ─ preparing ‘desc’: 2021-10-01T23:12:07.4370533Z checking DESCRIPTION meta-information ... 2021-10-01T23:12:07.4408297Z 2021-10-01T23:12:07.4410744Z ✔ checking DESCRIPTION meta-information 2021-10-01T23:12:07.5196359Z 2021-10-01T23:12:07.5365749Z 2021-10-01T23:12:07.5368742Z ─ checking for LF line-endings in source and make files and shell scripts 2021-10-01T23:12:07.5381853Z 2021-10-01T23:12:07.5416460Z 2021-10-01T23:12:07.5419170Z ─ checking for empty or unneeded directories 2021-10-01T23:12:07.5453893Z ─ building ‘desc_1.2.0.9000.tar.gz’ 2021-10-01T23:12:07.6616534Z 2021-10-01T23:12:07.6622254Z 2021-10-01T23:12:07.6625357Z 2021-10-01T23:12:07.6756691Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:12:07.6758235Z (as ‘lib’ is unspecified) 2021-10-01T23:12:07.9890707Z * installing *source* package ‘desc’ ... 2021-10-01T23:12:08.0124590Z ** R 2021-10-01T23:12:08.0305240Z ** inst 2021-10-01T23:12:08.0325229Z ** byte-compile and prepare package for lazy loading 2021-10-01T23:12:09.4515536Z ** help 2021-10-01T23:12:09.5936336Z *** installing help indices 2021-10-01T23:12:09.7018502Z ** building package indices 2021-10-01T23:12:09.8457278Z ** testing if installed package can be loaded 2021-10-01T23:12:10.0364967Z * DONE (desc) 2021-10-01T23:12:10.2493731Z 2021-10-01T23:12:10.2495213Z 2021-10-01T23:12:10.2497386Z checking for file ‘/tmp/RtmppFXH44/remotes9871422bc1c9/muschellij2-ghtravis-0b26809/DESCRIPTION’ ... 2021-10-01T23:12:10.2530162Z 2021-10-01T23:12:10.2533380Z ✔ checking for file ‘/tmp/RtmppFXH44/remotes9871422bc1c9/muschellij2-ghtravis-0b26809/DESCRIPTION’ 2021-10-01T23:12:10.2585132Z 2021-10-01T23:12:10.2659965Z 2021-10-01T23:12:10.2661082Z ─ preparing ‘ghtravis’: 2021-10-01T23:12:10.3074429Z 2021-10-01T23:12:10.3117117Z 2021-10-01T23:12:10.3118535Z ✔ checking DESCRIPTION meta-information 2021-10-01T23:12:10.3237844Z 2021-10-01T23:12:10.3278031Z 2021-10-01T23:12:10.3280892Z ─ checking for LF line-endings in source and make files and shell scripts 2021-10-01T23:12:10.3291591Z 2021-10-01T23:12:10.3321850Z 2021-10-01T23:12:10.3324314Z ─ checking for empty or unneeded directories 2021-10-01T23:12:10.3353723Z ─ building ‘ghtravis_0.15.1.tar.gz’ 2021-10-01T23:12:10.3601831Z 2021-10-01T23:12:10.3605413Z 2021-10-01T23:12:10.3607511Z 2021-10-01T23:12:10.3992600Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:12:10.3994878Z (as ‘lib’ is unspecified) 2021-10-01T23:12:10.6467773Z * installing *source* package ‘ghtravis’ ... 2021-10-01T23:12:10.6631297Z ** R 2021-10-01T23:12:10.6741514Z ** inst 2021-10-01T23:12:10.6751059Z ** byte-compile and prepare package for lazy loading 2021-10-01T23:12:11.7388142Z ** help 2021-10-01T23:12:11.7971610Z *** installing help indices 2021-10-01T23:12:11.8441097Z ** building package indices 2021-10-01T23:12:11.8870753Z ** testing if installed package can be loaded 2021-10-01T23:12:12.5396091Z * DONE (ghtravis) 2021-10-01T23:12:12.5512622Z Using github PAT from envvar GITHUB_PAT 2021-10-01T23:12:12.7953159Z Downloading GitHub repo muschellij2/aghast@HEAD 2021-10-01T23:12:14.9224674Z 2021-10-01T23:12:14.9227128Z tidyselect (NA -> 1.1.1) [CRAN] 2021-10-01T23:12:14.9227873Z generics (NA -> 0.1.0) [CRAN] 2021-10-01T23:12:14.9228576Z dplyr (NA -> 1.0.7) [CRAN] 2021-10-01T23:12:14.9229249Z tidyr (NA -> 1.1.4) [CRAN] 2021-10-01T23:12:14.9230102Z Installing 4 packages: tidyselect, generics, dplyr, tidyr 2021-10-01T23:12:14.9237148Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:12:14.9238056Z (as ‘lib’ is unspecified) 2021-10-01T23:12:30.5717080Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyselect_1.1.1.tar.gz' 2021-10-01T23:12:31.5768057Z Content type 'binary/octet-stream' length 196666 bytes (192 KB) 2021-10-01T23:12:31.5821732Z ================================================== 2021-10-01T23:12:31.5822590Z downloaded 192 KB 2021-10-01T23:12:31.5823044Z 2021-10-01T23:12:31.5877105Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/generics_0.1.0.tar.gz' 2021-10-01T23:12:32.6206813Z Content type 'binary/octet-stream' length 68547 bytes (66 KB) 2021-10-01T23:12:32.6208383Z ================================================== 2021-10-01T23:12:32.6209134Z downloaded 66 KB 2021-10-01T23:12:32.6209654Z 2021-10-01T23:12:32.6248334Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/dplyr_1.0.7.tar.gz' 2021-10-01T23:12:33.2813622Z Content type 'binary/octet-stream' length 1253865 bytes (1.2 MB) 2021-10-01T23:12:33.3180080Z ================================================== 2021-10-01T23:12:33.3181314Z downloaded 1.2 MB 2021-10-01T23:12:33.3181880Z 2021-10-01T23:12:33.3221757Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyr_1.1.4.tar.gz' 2021-10-01T23:12:33.9903929Z Content type 'binary/octet-stream' length 1126376 bytes (1.1 MB) 2021-10-01T23:12:34.0247382Z ================================================== 2021-10-01T23:12:34.0248041Z downloaded 1.1 MB 2021-10-01T23:12:34.0249442Z 2021-10-01T23:12:34.2637558Z * installing *binary* package ‘tidyselect’ ... 2021-10-01T23:12:34.2689192Z * DONE (tidyselect) 2021-10-01T23:12:34.4993070Z * installing *binary* package ‘generics’ ... 2021-10-01T23:12:34.5038178Z * DONE (generics) 2021-10-01T23:12:34.8254812Z * installing *binary* package ‘dplyr’ ... 2021-10-01T23:12:34.8340595Z * DONE (dplyr) 2021-10-01T23:12:35.1580712Z * installing *binary* package ‘tidyr’ ... 2021-10-01T23:12:35.1667317Z * DONE (tidyr) 2021-10-01T23:12:35.1779017Z 2021-10-01T23:12:35.1780491Z The downloaded source packages are in 2021-10-01T23:12:35.1782173Z ‘/tmp/RtmppFXH44/downloaded_packages’ 2021-10-01T23:12:35.3810650Z 2021-10-01T23:12:35.3814249Z checking for file ‘/tmp/RtmppFXH44/remotes98715b512ba5/muschellij2-aghast-0c3b853/DESCRIPTION’ ... 2021-10-01T23:12:35.3848033Z 2021-10-01T23:12:35.3850199Z ✔ checking for file ‘/tmp/RtmppFXH44/remotes98715b512ba5/muschellij2-aghast-0c3b853/DESCRIPTION’ 2021-10-01T23:12:35.3947479Z 2021-10-01T23:12:35.3948080Z 2021-10-01T23:12:35.3949062Z ─ preparing ‘aghast’: 2021-10-01T23:12:35.3949419Z 2021-10-01T23:12:35.3949759Z 2021-10-01T23:12:35.4013318Z checking DESCRIPTION meta-information ... 2021-10-01T23:12:35.4056997Z 2021-10-01T23:12:35.4059684Z ✔ checking DESCRIPTION meta-information 2021-10-01T23:12:35.4327846Z 2021-10-01T23:12:35.4370126Z 2021-10-01T23:12:35.4372945Z ─ checking for LF line-endings in source and make files and shell scripts 2021-10-01T23:12:35.4385089Z 2021-10-01T23:12:35.4423585Z 2021-10-01T23:12:35.4426119Z ─ checking for empty or unneeded directories 2021-10-01T23:12:35.4477290Z ─ building ‘aghast_0.2.1.tar.gz’ 2021-10-01T23:12:35.4552914Z 2021-10-01T23:12:35.4555517Z 2021-10-01T23:12:35.4557013Z 2021-10-01T23:12:35.4637517Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:12:35.4638825Z (as ‘lib’ is unspecified) 2021-10-01T23:12:35.6790825Z * installing *source* package ‘aghast’ ... 2021-10-01T23:12:35.7036478Z ** R 2021-10-01T23:12:35.7105367Z ** byte-compile and prepare package for lazy loading 2021-10-01T23:12:35.9660796Z ** help 2021-10-01T23:12:35.9887826Z *** installing help indices 2021-10-01T23:12:36.0133135Z ** building package indices 2021-10-01T23:12:36.0346950Z ** testing if installed package can be loaded 2021-10-01T23:12:36.2170938Z * DONE (aghast) 2021-10-01T23:12:36.2266987Z Installing 1 packages: covr 2021-10-01T23:12:36.2278830Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:12:36.2279771Z (as ‘lib’ is unspecified) 2021-10-01T23:12:51.8140327Z also installing the dependencies ‘lazyeval’, ‘rex’ 2021-10-01T23:12:51.8141292Z 2021-10-01T23:12:51.8149121Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lazyeval_0.2.2.tar.gz' 2021-10-01T23:12:54.1265502Z Content type 'binary/octet-stream' length 163882 bytes (160 KB) 2021-10-01T23:12:54.1316142Z ================================================== 2021-10-01T23:12:54.1316964Z downloaded 160 KB 2021-10-01T23:12:54.1317442Z 2021-10-01T23:12:54.1359204Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rex_1.2.0.tar.gz' 2021-10-01T23:12:54.7920789Z Content type 'binary/octet-stream' length 121278 bytes (118 KB) 2021-10-01T23:12:54.7934911Z ================================================== 2021-10-01T23:12:54.7935805Z downloaded 118 KB 2021-10-01T23:12:54.7936343Z 2021-10-01T23:12:54.7985805Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/covr_3.5.1.tar.gz' 2021-10-01T23:12:55.4045097Z Content type 'binary/octet-stream' length 287473 bytes (280 KB) 2021-10-01T23:12:55.4090310Z ================================================== 2021-10-01T23:12:55.4091958Z downloaded 280 KB 2021-10-01T23:12:55.4092926Z 2021-10-01T23:12:55.6468211Z * installing *binary* package ‘lazyeval’ ... 2021-10-01T23:12:55.6530292Z * DONE (lazyeval) 2021-10-01T23:12:55.9136678Z * installing *binary* package ‘rex’ ... 2021-10-01T23:12:55.9184472Z * DONE (rex) 2021-10-01T23:12:56.1700078Z * installing *binary* package ‘covr’ ... 2021-10-01T23:12:56.1762176Z * DONE (covr) 2021-10-01T23:12:56.1833042Z 2021-10-01T23:12:56.1834151Z The downloaded source packages are in 2021-10-01T23:12:56.1835676Z ‘/tmp/RtmppFXH44/downloaded_packages’ 2021-10-01T23:12:56.2010991Z 2021-10-01T23:12:56.2052014Z ##[group]Run remotes::install_deps(dependencies = TRUE) 2021-10-01T23:12:56.2052861Z remotes::install_deps(dependencies = TRUE) 2021-10-01T23:12:56.2053548Z remotes::install_cran("rcmdcheck") 2021-10-01T23:12:56.2054172Z remotes::install_cran("markdown") 2021-10-01T23:12:56.2064513Z shell: /usr/local/bin/Rscript {0} 2021-10-01T23:12:56.2064977Z env: 2021-10-01T23:12:56.2065481Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:12:56.2066016Z TIC_DEPLOY_KEY: 2021-10-01T23:12:56.2066898Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:12:56.2068749Z GITHUB_PAT: *** 2021-10-01T23:12:56.2069749Z COVERALLS_TOKEN: *** 2021-10-01T23:12:56.2070330Z continue-on-error: false 2021-10-01T23:12:56.2070852Z VDIFFR_RUN_TESTS: 2021-10-01T23:12:56.2071396Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:12:56.2071882Z TZ: UTC 2021-10-01T23:12:56.2072329Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:12:56.2072826Z NOT_CRAN: true 2021-10-01T23:12:56.2073255Z ##[endgroup] 2021-10-01T23:13:17.3883014Z RNifti (NA -> 929106d1b...) [GitHub] 2021-10-01T23:13:17.3885745Z gifti (NA -> e3ff5e0be...) [GitHub] 2021-10-01T23:13:17.3887662Z oro.nifti (NA -> bd06b05d2...) [GitHub] 2021-10-01T23:13:17.3889872Z papayar (NA -> 221ca9e39...) [GitHub] 2021-10-01T23:13:17.3891687Z later (NA -> 1.3.0 ) [CRAN] 2021-10-01T23:13:17.3893334Z promises (NA -> 1.2.0.1 ) [CRAN] 2021-10-01T23:13:17.3895082Z Rcpp (NA -> 1.0.7 ) [CRAN] 2021-10-01T23:13:17.3896870Z httpuv (NA -> 1.6.3 ) [CRAN] 2021-10-01T23:13:17.3899113Z abind (NA -> 1.4-5 ) [CRAN] 2021-10-01T23:13:17.3900957Z bitops (NA -> 1.0-7 ) [CRAN] 2021-10-01T23:13:17.3902741Z R.methodsS3 (NA -> 1.8.1 ) [CRAN] 2021-10-01T23:13:17.3904514Z R.oo (NA -> 1.24.0 ) [CRAN] 2021-10-01T23:13:17.3906960Z R.utils (NA -> 2.11.0 ) [CRAN] 2021-10-01T23:13:17.3908724Z matrixStats (NA -> 0.61.0 ) [CRAN] 2021-10-01T23:13:17.3910489Z base64enc (NA -> 0.1-3 ) [CRAN] 2021-10-01T23:13:17.3912075Z htmltools (NA -> 0.5.2 ) [CRAN] 2021-10-01T23:13:17.3913746Z bit (NA -> 4.0.4 ) [CRAN] 2021-10-01T23:13:17.3915459Z bit64 (NA -> 4.0.5 ) [CRAN] 2021-10-01T23:13:17.3917073Z tzdb (NA -> 0.1.2 ) [CRAN] 2021-10-01T23:13:17.3918596Z vroom (NA -> 1.5.5 ) [CRAN] 2021-10-01T23:13:17.3920237Z rematch (NA -> 1.0.1 ) [CRAN] 2021-10-01T23:13:17.3921951Z progress (NA -> 1.2.2 ) [CRAN] 2021-10-01T23:13:17.3923558Z cellranger (NA -> 1.1.0 ) [CRAN] 2021-10-01T23:13:17.3945305Z readr (NA -> 2.0.2 ) [CRAN] 2021-10-01T23:13:17.3947716Z hms (NA -> 1.1.1 ) [CRAN] 2021-10-01T23:13:17.3949015Z forcats (NA -> 0.5.1 ) [CRAN] 2021-10-01T23:13:17.3950365Z RcppArmad... (NA -> 0.10.7.0.0 ) [CRAN] 2021-10-01T23:13:17.3951732Z openxlsx (NA -> 4.2.4 ) [CRAN] 2021-10-01T23:13:17.3954869Z readxl (NA -> 1.3.1 ) [CRAN] 2021-10-01T23:13:17.3956723Z data.table (NA -> 1.14.2 ) [CRAN] 2021-10-01T23:13:17.3958225Z haven (NA -> 2.4.3 ) [CRAN] 2021-10-01T23:13:17.3959707Z conquer (NA -> 1.0.2 ) [CRAN] 2021-10-01T23:13:17.3961261Z MatrixModels (NA -> 0.5-0 ) [CRAN] 2021-10-01T23:13:17.3962585Z SparseM (NA -> 1.81 ) [CRAN] 2021-10-01T23:13:17.3963457Z numDeriv (NA -> 2016.8-1.1 ) [CRAN] 2021-10-01T23:13:17.3964301Z sp (NA -> 1.4-5 ) [CRAN] 2021-10-01T23:13:17.3965151Z RcppEigen (NA -> 0.3.3.9.1 ) [CRAN] 2021-10-01T23:13:17.3965996Z nloptr (NA -> 1.2.2.2 ) [CRAN] 2021-10-01T23:13:17.3966834Z minqa (NA -> 1.2.4 ) [CRAN] 2021-10-01T23:13:17.3967678Z lme4 (NA -> 1.1-27.1 ) [CRAN] 2021-10-01T23:13:17.3968488Z rio (NA -> 0.5.27 ) [CRAN] 2021-10-01T23:13:17.3969333Z maptools (NA -> 1.1-2 ) [CRAN] 2021-10-01T23:13:17.3970502Z quantreg (NA -> 5.86 ) [CRAN] 2021-10-01T23:13:17.3971401Z pbkrtest (NA -> 0.5.1 ) [CRAN] 2021-10-01T23:13:17.3972264Z carData (NA -> 3.0-4 ) [CRAN] 2021-10-01T23:13:17.3973127Z backports (NA -> 1.2.1 ) [CRAN] 2021-10-01T23:13:17.3973975Z car (NA -> 3.0-11 ) [CRAN] 2021-10-01T23:13:17.3974795Z corrplot (NA -> 0.90 ) [CRAN] 2021-10-01T23:13:17.3975637Z broom (NA -> 0.7.9 ) [CRAN] 2021-10-01T23:13:17.3976466Z gtable (NA -> 0.3.0 ) [CRAN] 2021-10-01T23:13:17.3977319Z colorspace (NA -> 2.0-2 ) [CRAN] 2021-10-01T23:13:17.3978384Z viridisLite (NA -> 0.4.0 ) [CRAN] 2021-10-01T23:13:17.3979322Z RColorBrewer (NA -> 1.1-2 ) [CRAN] 2021-10-01T23:13:17.3980225Z munsell (NA -> 0.5.0 ) [CRAN] 2021-10-01T23:13:17.3981065Z labeling (NA -> 0.4.2 ) [CRAN] 2021-10-01T23:13:17.3981919Z farver (NA -> 2.1.0 ) [CRAN] 2021-10-01T23:13:17.3982758Z scales (NA -> 1.1.1 ) [CRAN] 2021-10-01T23:13:17.3983582Z isoband (NA -> 0.2.5 ) [CRAN] 2021-10-01T23:13:17.3984432Z ggplot2 (NA -> 3.3.5 ) [CRAN] 2021-10-01T23:13:17.3985299Z gridExtra (NA -> 2.3 ) [CRAN] 2021-10-01T23:13:17.3986160Z dotCall64 (NA -> 1.0-1 ) [CRAN] 2021-10-01T23:13:17.3987018Z servr (NA -> 0.23 ) [CRAN] 2021-10-01T23:13:17.3987877Z neurobase (NA -> 1.32.1 ) [CRAN] 2021-10-01T23:13:17.3988749Z jquerylib (NA -> 0.1.4 ) [CRAN] 2021-10-01T23:13:17.3989595Z tinytex (NA -> 0.34 ) [CRAN] 2021-10-01T23:13:17.3990441Z rstatix (NA -> 0.7.0 ) [CRAN] 2021-10-01T23:13:17.3991284Z polynom (NA -> 1.4-0 ) [CRAN] 2021-10-01T23:13:17.3992124Z ggsignif (NA -> 0.6.3 ) [CRAN] 2021-10-01T23:13:17.3992983Z cowplot (NA -> 1.1.1 ) [CRAN] 2021-10-01T23:13:17.3993817Z ggsci (NA -> 2.9 ) [CRAN] 2021-10-01T23:13:17.3994654Z ggrepel (NA -> 0.9.1 ) [CRAN] 2021-10-01T23:13:17.3995508Z crosstalk (NA -> 1.1.1 ) [CRAN] 2021-10-01T23:13:17.3996391Z htmlwidgets (NA -> 1.5.4 ) [CRAN] 2021-10-01T23:13:17.3997249Z maps (NA -> 3.4.0 ) [CRAN] 2021-10-01T23:13:17.3998064Z viridis (NA -> 0.6.1 ) [CRAN] 2021-10-01T23:13:17.3998902Z spam (NA -> 2.7-0 ) [CRAN] 2021-10-01T23:13:17.3999751Z rmarkdown (NA -> 2.11 ) [CRAN] 2021-10-01T23:13:17.4000590Z ggpubr (NA -> 0.4.0 ) [CRAN] 2021-10-01T23:13:17.4001413Z rgl (NA -> 0.107.14 ) [CRAN] 2021-10-01T23:13:17.4002238Z fields (NA -> 12.5 ) [CRAN] 2021-10-01T23:13:17.5533801Z Downloading GitHub repo neuroconductor/RNifti@929106d1b17d6c09c8b001b5e39d448ed9ef635f 2021-10-01T23:13:20.2621493Z Rcpp (NA -> 1.0.7) [CRAN] 2021-10-01T23:13:20.2651971Z Installing 1 packages: Rcpp 2021-10-01T23:13:20.2670824Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:13:20.2672083Z (as ‘lib’ is unspecified) 2021-10-01T23:13:36.4885262Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/Rcpp_1.0.7.tar.gz' 2021-10-01T23:13:37.8697692Z Content type 'binary/octet-stream' length 4189418 bytes (4.0 MB) 2021-10-01T23:13:37.8702261Z ================================================== 2021-10-01T23:13:37.8702775Z downloaded 4.0 MB 2021-10-01T23:13:37.8703101Z 2021-10-01T23:13:38.4318439Z * installing *binary* package ‘Rcpp’ ... 2021-10-01T23:13:38.4784652Z * DONE (Rcpp) 2021-10-01T23:13:38.5004598Z 2021-10-01T23:13:38.5005906Z The downloaded source packages are in 2021-10-01T23:13:38.5007596Z ‘/tmp/RtmphXQJ1r/downloaded_packages’ 2021-10-01T23:13:38.7259449Z 2021-10-01T23:13:38.7276969Z checking for file ‘/tmp/RtmphXQJ1r/remotes9d4410c4bdee/neuroconductor-RNifti-929106d/DESCRIPTION’ ... 2021-10-01T23:13:38.7351755Z 2021-10-01T23:13:38.7354170Z ✔ checking for file ‘/tmp/RtmphXQJ1r/remotes9d4410c4bdee/neuroconductor-RNifti-929106d/DESCRIPTION’ 2021-10-01T23:13:38.7460167Z 2021-10-01T23:13:38.7471722Z 2021-10-01T23:13:38.7473179Z ─ preparing ‘RNifti’: 2021-10-01T23:13:38.7598331Z checking DESCRIPTION meta-information ... 2021-10-01T23:13:38.7639230Z 2021-10-01T23:13:38.7640937Z ✔ checking DESCRIPTION meta-information 2021-10-01T23:13:38.7667770Z ─ cleaning src 2021-10-01T23:13:38.7725329Z 2021-10-01T23:13:38.7725845Z 2021-10-01T23:13:38.7726713Z ─ running ‘cleanup’ 2021-10-01T23:13:38.8210403Z 2021-10-01T23:13:38.8253485Z 2021-10-01T23:13:38.8255556Z ─ checking for LF line-endings in source and make files and shell scripts 2021-10-01T23:13:38.8711156Z 2021-10-01T23:13:38.8755691Z 2021-10-01T23:13:38.8757484Z ─ checking for empty or unneeded directories 2021-10-01T23:13:38.8770584Z 2021-10-01T23:13:38.8811126Z 2021-10-01T23:13:38.8812813Z ─ building ‘RNifti_1.3.1.tar.gz’ 2021-10-01T23:13:39.2206526Z 2021-10-01T23:13:39.2208768Z 2021-10-01T23:13:39.2209712Z 2021-10-01T23:13:39.2335906Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:13:39.2336928Z (as ‘lib’ is unspecified) 2021-10-01T23:13:39.5718924Z * installing *source* package ‘RNifti’ ... 2021-10-01T23:13:39.5933246Z ** libs 2021-10-01T23:13:39.5992242Z 2021-10-01T23:13:39.5995729Z g++ -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c main.cpp -o main.o 2021-10-01T23:14:00.0357329Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c zzz.c -o zzz.o 2021-10-01T23:14:00.1409178Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c zlib/adler32.c -o zlib/adler32.o 2021-10-01T23:14:00.2449784Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c zlib/compress.c -o zlib/compress.o 2021-10-01T23:14:00.3056345Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c zlib/crc32.c -o zlib/crc32.o 2021-10-01T23:14:00.4358785Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c zlib/deflate.c -o zlib/deflate.o 2021-10-01T23:14:00.9778130Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c zlib/gzclose.c -o zlib/gzclose.o 2021-10-01T23:14:01.8766243Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c zlib/gzlib.c -o zlib/gzlib.o 2021-10-01T23:14:01.8770194Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c zlib/gzread.c -o zlib/gzread.o 2021-10-01T23:14:01.8773194Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c zlib/gzwrite.c -o zlib/gzwrite.o 2021-10-01T23:14:01.8776586Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c zlib/infback.c -o zlib/infback.o 2021-10-01T23:14:01.8779845Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c zlib/inffast.c -o zlib/inffast.o 2021-10-01T23:14:01.9430554Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c zlib/inflate.c -o zlib/inflate.o 2021-10-01T23:14:02.5432847Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c zlib/inftrees.c -o zlib/inftrees.o 2021-10-01T23:14:02.6562668Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c zlib/trees.c -o zlib/trees.o 2021-10-01T23:14:03.0217604Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c zlib/uncompr.c -o zlib/uncompr.o 2021-10-01T23:14:03.0664467Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c zlib/zutil.c -o zlib/zutil.o 2021-10-01T23:14:03.1219309Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c znzlib/znzlib.c -o znzlib/znzlib.o 2021-10-01T23:14:03.2147847Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c niftilib/nifti1_io.c -o niftilib/nifti1_io.o 2021-10-01T23:14:04.5191908Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -c niftilib/nifti2_io.c -o niftilib/nifti2_io.o 2021-10-01T23:14:07.2811911Z g++ -shared -L/opt/R/3.5.3/lib/R/lib -L/usr/local/lib -o RNifti.so main.o zzz.o zlib/adler32.o zlib/compress.o zlib/crc32.o zlib/deflate.o zlib/gzclose.o zlib/gzlib.o zlib/gzread.o zlib/gzwrite.o zlib/infback.o zlib/inffast.o zlib/inflate.o zlib/inftrees.o zlib/trees.o zlib/uncompr.o zlib/zutil.o znzlib/znzlib.o niftilib/nifti1_io.o niftilib/nifti2_io.o -L/opt/R/3.5.3/lib/R/lib -lR 2021-10-01T23:14:07.4890503Z installing to /home/runner/work/_temp/Library/RNifti/libs 2021-10-01T23:14:07.5036518Z ** R 2021-10-01T23:14:07.5138509Z ** inst 2021-10-01T23:14:07.5174163Z ** byte-compile and prepare package for lazy loading 2021-10-01T23:14:08.1564855Z ** help 2021-10-01T23:14:08.2103661Z *** installing help indices 2021-10-01T23:14:08.2937132Z ** building package indices 2021-10-01T23:14:08.3257010Z ** testing if installed package can be loaded 2021-10-01T23:14:08.5980011Z * DONE (RNifti) 2021-10-01T23:14:08.7843190Z Downloading GitHub repo neuroconductor/gifti@e3ff5e0beb859ef5b27242365b9d4487873adb9e 2021-10-01T23:14:11.0641604Z R.methodsS3 (NA -> 1.8.1 ) [CRAN] 2021-10-01T23:14:11.0642457Z R.oo (NA -> 1.24.0) [CRAN] 2021-10-01T23:14:11.0643181Z R.utils (NA -> 2.11.0) [CRAN] 2021-10-01T23:14:11.0644680Z Installing 4 packages: R.methodsS3, R.oo, R.utils, base64enc 2021-10-01T23:14:11.0650693Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:14:11.0651879Z (as ‘lib’ is unspecified) 2021-10-01T23:14:11.0652688Z base64enc (NA -> 0.1-3 ) [CRAN] 2021-10-01T23:14:27.4109937Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.methodsS3_1.8.1.tar.gz' 2021-10-01T23:14:28.1854969Z Content type 'binary/octet-stream' length 77783 bytes (75 KB) 2021-10-01T23:14:28.1938327Z ================================================== 2021-10-01T23:14:28.1939212Z downloaded 75 KB 2021-10-01T23:14:28.1939671Z 2021-10-01T23:14:28.1980349Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.oo_1.24.0.tar.gz' 2021-10-01T23:14:29.0298800Z Content type 'binary/octet-stream' length 951271 bytes (928 KB) 2021-10-01T23:14:29.1758890Z ================================================== 2021-10-01T23:14:29.1759629Z downloaded 928 KB 2021-10-01T23:14:29.1759950Z 2021-10-01T23:14:29.1803699Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.utils_2.11.0.tar.gz' 2021-10-01T23:14:29.8826966Z Content type 'binary/octet-stream' length 1390065 bytes (1.3 MB) 2021-10-01T23:14:29.9315092Z ================================================== 2021-10-01T23:14:29.9315748Z downloaded 1.3 MB 2021-10-01T23:14:29.9316073Z 2021-10-01T23:14:29.9363262Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/base64enc_0.1-3.tar.gz' 2021-10-01T23:14:30.5919585Z Content type 'binary/octet-stream' length 38804 bytes (37 KB) 2021-10-01T23:14:30.5921877Z ================================================== 2021-10-01T23:14:30.5923201Z downloaded 37 KB 2021-10-01T23:14:30.5924127Z 2021-10-01T23:14:30.8212207Z * installing *binary* package ‘R.methodsS3’ ... 2021-10-01T23:14:30.8263095Z * DONE (R.methodsS3) 2021-10-01T23:14:31.0487751Z * installing *binary* package ‘base64enc’ ... 2021-10-01T23:14:31.0541053Z * DONE (base64enc) 2021-10-01T23:14:31.3343007Z * installing *binary* package ‘R.oo’ ... 2021-10-01T23:14:31.3399108Z * DONE (R.oo) 2021-10-01T23:14:31.6246025Z * installing *binary* package ‘R.utils’ ... 2021-10-01T23:14:31.6315550Z * DONE (R.utils) 2021-10-01T23:14:31.6394974Z 2021-10-01T23:14:31.6396303Z The downloaded source packages are in 2021-10-01T23:14:31.6397941Z ‘/tmp/RtmphXQJ1r/downloaded_packages’ 2021-10-01T23:14:31.8549827Z 2021-10-01T23:14:31.8552552Z checking for file ‘/tmp/RtmphXQJ1r/remotes9d441c6dc989/neuroconductor-gifti-e3ff5e0/DESCRIPTION’ ... 2021-10-01T23:14:31.8609388Z 2021-10-01T23:14:31.8611768Z ✔ checking for file ‘/tmp/RtmphXQJ1r/remotes9d441c6dc989/neuroconductor-gifti-e3ff5e0/DESCRIPTION’ 2021-10-01T23:14:31.8691739Z 2021-10-01T23:14:31.8692411Z 2021-10-01T23:14:31.8693426Z ─ preparing ‘gifti’: 2021-10-01T23:14:31.8708018Z checking DESCRIPTION meta-information ... 2021-10-01T23:14:31.8744557Z 2021-10-01T23:14:31.8746145Z ✔ checking DESCRIPTION meta-information 2021-10-01T23:14:31.9048546Z 2021-10-01T23:14:31.9085915Z 2021-10-01T23:14:31.9088600Z ─ checking for LF line-endings in source and make files and shell scripts 2021-10-01T23:14:31.9100856Z 2021-10-01T23:14:31.9149012Z 2021-10-01T23:14:31.9151540Z ─ checking for empty or unneeded directories 2021-10-01T23:14:31.9188268Z ─ building ‘gifti_0.7.6.tar.gz’ 2021-10-01T23:14:31.9376007Z 2021-10-01T23:14:31.9378987Z 2021-10-01T23:14:31.9380513Z 2021-10-01T23:14:31.9904791Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:14:31.9906349Z (as ‘lib’ is unspecified) 2021-10-01T23:14:32.2306233Z * installing *source* package ‘gifti’ ... 2021-10-01T23:14:32.2458676Z ** R 2021-10-01T23:14:32.2531840Z ** byte-compile and prepare package for lazy loading 2021-10-01T23:14:32.6060246Z ** help 2021-10-01T23:14:32.6409507Z *** installing help indices 2021-10-01T23:14:32.6762048Z ** building package indices 2021-10-01T23:14:32.7041108Z ** installing vignettes 2021-10-01T23:14:32.7064523Z ** testing if installed package can be loaded 2021-10-01T23:14:32.9607217Z * DONE (gifti) 2021-10-01T23:14:33.1368144Z Downloading GitHub repo neuroconductor/oro.nifti@bd06b05d2a090c743e51d745a826e8b77af278f0 2021-10-01T23:14:35.9453550Z 2021-10-01T23:14:35.9456649Z jquerylib (NA -> 0.1.4) [CRAN] 2021-10-01T23:14:35.9458683Z Installing 7 packages: jquerylib, tinytex, htmltools, rmarkdown, rticles, abind, bitops 2021-10-01T23:14:35.9463083Z tinytex (NA -> 0.34 ) [CRAN] 2021-10-01T23:14:35.9464649Z htmltools (NA -> 0.5.2) [CRAN] 2021-10-01T23:14:35.9466081Z rmarkdown (NA -> 2.11 ) [CRAN] 2021-10-01T23:14:35.9467488Z rticles (NA -> 0.21 ) [CRAN] 2021-10-01T23:14:35.9469386Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:14:35.9471010Z (as ‘lib’ is unspecified) 2021-10-01T23:14:35.9472606Z abind (NA -> 1.4-5) [CRAN] 2021-10-01T23:14:35.9473950Z bitops (NA -> 1.0-7) [CRAN] 2021-10-01T23:14:52.5616449Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/jquerylib_0.1.4.tar.gz' 2021-10-01T23:14:54.3411546Z Content type 'binary/octet-stream' length 526342 bytes (514 KB) 2021-10-01T23:14:54.3492564Z ================================================== 2021-10-01T23:14:54.3493212Z downloaded 514 KB 2021-10-01T23:14:54.3493521Z 2021-10-01T23:14:54.3540856Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tinytex_0.34.tar.gz' 2021-10-01T23:14:54.9603277Z Content type 'binary/octet-stream' length 120017 bytes (117 KB) 2021-10-01T23:14:54.9617662Z ================================================== 2021-10-01T23:14:54.9619658Z downloaded 117 KB 2021-10-01T23:14:54.9620238Z 2021-10-01T23:14:54.9668424Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/htmltools_0.5.2.tar.gz' 2021-10-01T23:14:55.8278839Z Content type 'binary/octet-stream' length 335665 bytes (327 KB) 2021-10-01T23:14:55.8326168Z ================================================== 2021-10-01T23:14:55.8326793Z downloaded 327 KB 2021-10-01T23:14:55.8327120Z 2021-10-01T23:14:55.8374836Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rmarkdown_2.11.tar.gz' 2021-10-01T23:14:56.7196027Z Content type 'binary/octet-stream' length 3614134 bytes (3.4 MB) 2021-10-01T23:14:56.8740242Z ================================================== 2021-10-01T23:14:56.8741327Z downloaded 3.4 MB 2021-10-01T23:14:56.8741882Z 2021-10-01T23:14:56.8789795Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rticles_0.21.tar.gz' 2021-10-01T23:14:57.4212231Z Content type 'binary/octet-stream' length 2083560 bytes (2.0 MB) 2021-10-01T23:14:57.4358998Z ================================================== 2021-10-01T23:14:57.4359643Z downloaded 2.0 MB 2021-10-01T23:14:57.4359970Z 2021-10-01T23:14:57.4405556Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/abind_1.4-5.tar.gz' 2021-10-01T23:14:58.0970712Z Content type 'binary/octet-stream' length 60401 bytes (58 KB) 2021-10-01T23:14:58.0972508Z ================================================== 2021-10-01T23:14:58.0973873Z downloaded 58 KB 2021-10-01T23:14:58.0974771Z 2021-10-01T23:14:58.1020076Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bitops_1.0-7.tar.gz' 2021-10-01T23:14:58.9502462Z Content type 'binary/octet-stream' length 35283 bytes (34 KB) 2021-10-01T23:14:58.9504528Z ================================================== 2021-10-01T23:14:58.9507490Z downloaded 34 KB 2021-10-01T23:14:58.9508186Z 2021-10-01T23:14:59.1822675Z * installing *binary* package ‘tinytex’ ... 2021-10-01T23:14:59.1868648Z * DONE (tinytex) 2021-10-01T23:14:59.4307653Z * installing *binary* package ‘htmltools’ ... 2021-10-01T23:14:59.4360950Z * DONE (htmltools) 2021-10-01T23:14:59.6553812Z * installing *binary* package ‘abind’ ... 2021-10-01T23:14:59.6597572Z * DONE (abind) 2021-10-01T23:14:59.8774871Z * installing *binary* package ‘bitops’ ... 2021-10-01T23:14:59.8819895Z * DONE (bitops) 2021-10-01T23:15:00.1660329Z * installing *binary* package ‘jquerylib’ ... 2021-10-01T23:15:00.1725116Z * DONE (jquerylib) 2021-10-01T23:15:00.8329890Z * installing *binary* package ‘rmarkdown’ ... 2021-10-01T23:15:00.8560005Z * DONE (rmarkdown) 2021-10-01T23:15:01.4330055Z * installing *binary* package ‘rticles’ ... 2021-10-01T23:15:01.4568302Z * DONE (rticles) 2021-10-01T23:15:01.4738538Z 2021-10-01T23:15:01.4740045Z The downloaded source packages are in 2021-10-01T23:15:01.4741572Z ‘/tmp/RtmphXQJ1r/downloaded_packages’ 2021-10-01T23:15:01.6745162Z 2021-10-01T23:15:01.6760548Z checking for file ‘/tmp/RtmphXQJ1r/remotes9d4430a7f5b6/neuroconductor-oro.nifti-bd06b05/DESCRIPTION’ ... 2021-10-01T23:15:01.6797982Z 2021-10-01T23:15:01.6800493Z ✔ checking for file ‘/tmp/RtmphXQJ1r/remotes9d4430a7f5b6/neuroconductor-oro.nifti-bd06b05/DESCRIPTION’ 2021-10-01T23:15:01.7100099Z 2021-10-01T23:15:01.7101373Z 2021-10-01T23:15:01.7102973Z ─ preparing ‘oro.nifti’: 2021-10-01T23:15:01.7217629Z checking DESCRIPTION meta-information ... 2021-10-01T23:15:01.7252677Z 2021-10-01T23:15:01.7254217Z ✔ checking DESCRIPTION meta-information 2021-10-01T23:15:01.8892006Z 2021-10-01T23:15:01.8930472Z 2021-10-01T23:15:01.8933454Z ─ checking for LF line-endings in source and make files and shell scripts 2021-10-01T23:15:01.8946030Z 2021-10-01T23:15:01.8980384Z 2021-10-01T23:15:01.8982866Z ─ checking for empty or unneeded directories 2021-10-01T23:15:01.8986340Z Removed empty directory ‘oro.nifti/vignettes’ 2021-10-01T23:15:01.8996876Z 2021-10-01T23:15:01.9029713Z 2021-10-01T23:15:01.9031915Z ─ building ‘oro.nifti_0.10.3.tar.gz’ 2021-10-01T23:15:02.4558247Z 2021-10-01T23:15:02.4562950Z 2021-10-01T23:15:02.4565406Z 2021-10-01T23:15:02.4759637Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:15:02.4761265Z (as ‘lib’ is unspecified) 2021-10-01T23:15:03.0222223Z * installing *source* package ‘oro.nifti’ ... 2021-10-01T23:15:03.0433786Z ** R 2021-10-01T23:15:03.1028719Z ** demo 2021-10-01T23:15:03.1036551Z ** inst 2021-10-01T23:15:03.1121880Z ** byte-compile and prepare package for lazy loading 2021-10-01T23:15:04.0810871Z Creating a new generic function for ‘origin’ in package ‘oro.nifti’ 2021-10-01T23:15:09.3282608Z ** help 2021-10-01T23:15:09.7025532Z *** installing help indices 2021-10-01T23:15:09.9648220Z ** building package indices 2021-10-01T23:15:10.2543696Z ** testing if installed package can be loaded 2021-10-01T23:15:10.8306639Z * DONE (oro.nifti) 2021-10-01T23:15:11.0386445Z Downloading GitHub repo neuroconductor/papayar@221ca9e39ad852260430874479e9ee8607080640 2021-10-01T23:15:13.7516426Z 2021-10-01T23:15:13.7518441Z neurobase (NA -> 1d4b17291...) [GitHub] 2021-10-01T23:15:13.7519499Z later (NA -> 1.3.0 ) [CRAN] 2021-10-01T23:15:13.7520486Z promises (NA -> 1.2.0.1 ) [CRAN] 2021-10-01T23:15:13.7521456Z httpuv (NA -> 1.6.3 ) [CRAN] 2021-10-01T23:15:13.7522922Z matrixStats (NA -> 0.61.0 ) [CRAN] 2021-10-01T23:15:13.7523993Z servr (NA -> 0.23 ) [CRAN] 2021-10-01T23:15:13.9305417Z Downloading GitHub repo neuroconductor/neurobase@1d4b172915192d419b4defb2e56d84d7541c03cd 2021-10-01T23:15:17.2551857Z matrixStats (NA -> 0.61.0) [CRAN] 2021-10-01T23:15:17.2558655Z Installing 1 packages: matrixStats 2021-10-01T23:15:17.2576716Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:15:17.2579592Z (as ‘lib’ is unspecified) 2021-10-01T23:15:33.8437452Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/matrixStats_0.61.0.tar.gz' 2021-10-01T23:15:34.6977448Z Content type 'binary/octet-stream' length 672239 bytes (656 KB) 2021-10-01T23:15:34.7117180Z ================================================== 2021-10-01T23:15:34.7117812Z downloaded 656 KB 2021-10-01T23:15:34.7118139Z 2021-10-01T23:15:35.0569492Z * installing *binary* package ‘matrixStats’ ... 2021-10-01T23:15:35.0662532Z * DONE (matrixStats) 2021-10-01T23:15:35.0780180Z 2021-10-01T23:15:35.0781527Z The downloaded source packages are in 2021-10-01T23:15:35.0783201Z ‘/tmp/RtmphXQJ1r/downloaded_packages’ 2021-10-01T23:15:35.2779536Z 2021-10-01T23:15:35.2791593Z checking for file ‘/tmp/RtmphXQJ1r/remotes9d447e4853f6/neuroconductor-neurobase-1d4b172/DESCRIPTION’ ... 2021-10-01T23:15:35.2793131Z 2021-10-01T23:15:35.2801856Z checking for file ‘/tmp/RtmphXQJ1r/remotes9d447e4853f6/neuroconductor-neurobase-1d4b172/DESCRIPTION’ ... 2021-10-01T23:15:35.2849472Z 2021-10-01T23:15:35.2852523Z ✔ checking for file ‘/tmp/RtmphXQJ1r/remotes9d447e4853f6/neuroconductor-neurobase-1d4b172/DESCRIPTION’ 2021-10-01T23:15:35.3052708Z 2021-10-01T23:15:35.3114530Z 2021-10-01T23:15:35.3118023Z ─ preparing ‘neurobase’: 2021-10-01T23:15:35.3139483Z 2021-10-01T23:15:35.3143361Z 2021-10-01T23:15:35.3182349Z checking DESCRIPTION meta-information ... 2021-10-01T23:15:35.3221580Z 2021-10-01T23:15:35.3223936Z ✔ checking DESCRIPTION meta-information 2021-10-01T23:15:35.4146712Z 2021-10-01T23:15:35.4186676Z 2021-10-01T23:15:35.4189608Z ─ checking for LF line-endings in source and make files and shell scripts 2021-10-01T23:15:35.4201926Z 2021-10-01T23:15:35.4240306Z 2021-10-01T23:15:35.4242803Z ─ checking for empty or unneeded directories 2021-10-01T23:15:35.4254033Z 2021-10-01T23:15:35.4287917Z 2021-10-01T23:15:35.4290329Z ─ building ‘neurobase_1.30.1.tar.gz’ 2021-10-01T23:15:35.5127522Z 2021-10-01T23:15:35.5133197Z 2021-10-01T23:15:35.5134960Z 2021-10-01T23:15:35.5235924Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:15:35.5237387Z (as ‘lib’ is unspecified) 2021-10-01T23:15:35.8202177Z * installing *source* package ‘neurobase’ ... 2021-10-01T23:15:35.8399600Z ** R 2021-10-01T23:15:35.8661988Z ** byte-compile and prepare package for lazy loading 2021-10-01T23:15:38.1430412Z ** help 2021-10-01T23:15:38.3104970Z *** installing help indices 2021-10-01T23:15:38.4285057Z ** building package indices 2021-10-01T23:15:38.5421463Z ** installing vignettes 2021-10-01T23:15:38.5464238Z ** testing if installed package can be loaded 2021-10-01T23:15:39.2673938Z * DONE (neurobase) 2021-10-01T23:15:39.2882574Z Installing 5 packages: later, promises, httpuv, matrixStats, servr 2021-10-01T23:15:39.2891797Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:15:39.2892999Z (as ‘lib’ is unspecified) 2021-10-01T23:15:55.4058468Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/later_1.3.0.tar.gz' 2021-10-01T23:15:56.2958493Z Content type 'binary/octet-stream' length 1117461 bytes (1.1 MB) 2021-10-01T23:15:56.3365377Z ================================================== 2021-10-01T23:15:56.3366035Z downloaded 1.1 MB 2021-10-01T23:15:56.3366361Z 2021-10-01T23:15:56.3410952Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/promises_1.2.0.1.tar.gz' 2021-10-01T23:15:58.3003077Z Content type 'binary/octet-stream' length 1963596 bytes (1.9 MB) 2021-10-01T23:15:58.3508094Z ================================================== 2021-10-01T23:15:58.3508765Z downloaded 1.9 MB 2021-10-01T23:15:58.3509077Z 2021-10-01T23:15:58.3553927Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/httpuv_1.6.3.tar.gz' 2021-10-01T23:15:59.3598432Z Content type 'binary/octet-stream' length 5074749 bytes (4.8 MB) 2021-10-01T23:15:59.6345384Z ================================================== 2021-10-01T23:15:59.6346434Z downloaded 4.8 MB 2021-10-01T23:15:59.6346892Z 2021-10-01T23:15:59.6392580Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/matrixStats_0.61.0.tar.gz' 2021-10-01T23:16:00.3933205Z Content type 'binary/octet-stream' length 672239 bytes (656 KB) 2021-10-01T23:16:00.4277662Z ================================================== 2021-10-01T23:16:00.4278674Z downloaded 656 KB 2021-10-01T23:16:00.4280260Z 2021-10-01T23:16:00.4363021Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/servr_0.23.tar.gz' 2021-10-01T23:16:01.2415753Z Content type 'binary/octet-stream' length 83832 bytes (81 KB) 2021-10-01T23:16:01.2419362Z ================================================== 2021-10-01T23:16:01.2422316Z downloaded 81 KB 2021-10-01T23:16:01.2422934Z 2021-10-01T23:16:01.6231010Z * installing *binary* package ‘later’ ... 2021-10-01T23:16:01.6321967Z * DONE (later) 2021-10-01T23:16:01.9647319Z * installing *binary* package ‘matrixStats’ ... 2021-10-01T23:16:01.9769362Z * DONE (matrixStats) 2021-10-01T23:16:02.3477828Z * installing *binary* package ‘promises’ ... 2021-10-01T23:16:02.3566661Z * DONE (promises) 2021-10-01T23:16:03.1820121Z * installing *binary* package ‘httpuv’ ... 2021-10-01T23:16:03.2027694Z * DONE (httpuv) 2021-10-01T23:16:03.4515065Z * installing *binary* package ‘servr’ ... 2021-10-01T23:16:03.4566755Z * DONE (servr) 2021-10-01T23:16:03.4655868Z 2021-10-01T23:16:03.4657212Z The downloaded source packages are in 2021-10-01T23:16:03.4659019Z ‘/tmp/RtmphXQJ1r/downloaded_packages’ 2021-10-01T23:16:03.5613949Z Skipping install of 'neurobase' from a github remote, the SHA1 (1d4b1729) has not changed since last install. 2021-10-01T23:16:03.5615807Z Use `force = TRUE` to force installation 2021-10-01T23:16:03.7659589Z 2021-10-01T23:16:03.7660792Z 2021-10-01T23:16:03.7680162Z checking for file ‘/tmp/RtmphXQJ1r/remotes9d447531d38c/neuroconductor-papayar-221ca9e/DESCRIPTION’ ... 2021-10-01T23:16:03.7741360Z 2021-10-01T23:16:03.7746092Z ✔ checking for file ‘/tmp/RtmphXQJ1r/remotes9d447531d38c/neuroconductor-papayar-221ca9e/DESCRIPTION’ 2021-10-01T23:16:03.7761208Z 2021-10-01T23:16:03.7819815Z 2021-10-01T23:16:03.7821318Z ─ preparing ‘papayar’: 2021-10-01T23:16:03.7821693Z 2021-10-01T23:16:03.7822050Z 2021-10-01T23:16:03.7828074Z checking DESCRIPTION meta-information ... 2021-10-01T23:16:03.7869332Z 2021-10-01T23:16:03.7871682Z ✔ checking DESCRIPTION meta-information 2021-10-01T23:16:03.8073866Z 2021-10-01T23:16:03.8114136Z 2021-10-01T23:16:03.8116914Z ─ checking for LF line-endings in source and make files and shell scripts 2021-10-01T23:16:03.8128271Z 2021-10-01T23:16:03.8162878Z 2021-10-01T23:16:03.8165293Z ─ checking for empty or unneeded directories 2021-10-01T23:16:03.8207173Z ─ building ‘papayar_1.0.tar.gz’ 2021-10-01T23:16:03.9259264Z 2021-10-01T23:16:03.9262452Z 2021-10-01T23:16:03.9263943Z 2021-10-01T23:16:03.9352915Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:16:03.9354424Z (as ‘lib’ is unspecified) 2021-10-01T23:16:04.1887828Z * installing *source* package ‘papayar’ ... 2021-10-01T23:16:04.2029499Z ** R 2021-10-01T23:16:04.2063896Z ** inst 2021-10-01T23:16:04.2085496Z ** byte-compile and prepare package for lazy loading 2021-10-01T23:16:04.9409844Z ** help 2021-10-01T23:16:04.9574959Z *** installing help indices 2021-10-01T23:16:04.9846790Z ** building package indices 2021-10-01T23:16:04.9984327Z ** testing if installed package can be loaded 2021-10-01T23:16:05.7900537Z * DONE (papayar) 2021-10-01T23:16:05.8021827Z Installing 76 packages: later, promises, Rcpp, httpuv, abind, bitops, R.methodsS3, R.oo, R.utils, matrixStats, base64enc, htmltools, bit, bit64, tzdb, vroom, rematch, progress, cellranger, readr, hms, forcats, RcppArmadillo, openxlsx, readxl, data.table, haven, conquer, MatrixModels, SparseM, numDeriv, sp, RcppEigen, nloptr, minqa, lme4, rio, maptools, quantreg, pbkrtest, carData, backports, car, corrplot, broom, gtable, colorspace, viridisLite, RColorBrewer, munsell, labeling, farver, scales, isoband, ggplot2, gridExtra, dotCall64, servr, neurobase, jquerylib, tinytex, rstatix, polynom, ggsignif, cowplot, ggsci, ggrepel, crosstalk, htmlwidgets, maps, viridis, spam, rmarkdown, ggpubr, rgl, fields 2021-10-01T23:16:05.8027942Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:16:05.8029125Z (as ‘lib’ is unspecified) 2021-10-01T23:16:22.5872255Z also installing the dependency ‘oro.nifti’ 2021-10-01T23:16:22.5873515Z 2021-10-01T23:16:22.5881099Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/oro.nifti_0.11.0.tar.gz' 2021-10-01T23:16:23.4187932Z Content type 'binary/octet-stream' length 6038850 bytes (5.8 MB) 2021-10-01T23:16:23.5138569Z ================================================== 2021-10-01T23:16:23.5139778Z downloaded 5.8 MB 2021-10-01T23:16:23.5140425Z 2021-10-01T23:16:23.5186492Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/later_1.3.0.tar.gz' 2021-10-01T23:16:24.0980998Z Content type 'binary/octet-stream' length 1117461 bytes (1.1 MB) 2021-10-01T23:16:24.2677423Z ================================================== 2021-10-01T23:16:24.2679946Z downloaded 1.1 MB 2021-10-01T23:16:24.2681884Z 2021-10-01T23:16:24.2744869Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/promises_1.2.0.1.tar.gz' 2021-10-01T23:16:24.8442971Z Content type 'binary/octet-stream' length 1963596 bytes (1.9 MB) 2021-10-01T23:16:24.8973877Z ================================================== 2021-10-01T23:16:24.8974472Z downloaded 1.9 MB 2021-10-01T23:16:24.8974800Z 2021-10-01T23:16:24.9118796Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/Rcpp_1.0.7.tar.gz' 2021-10-01T23:16:25.7186647Z Content type 'binary/octet-stream' length 4189418 bytes (4.0 MB) 2021-10-01T23:16:25.8234969Z ================================================== 2021-10-01T23:16:25.8237337Z downloaded 4.0 MB 2021-10-01T23:16:25.8238098Z 2021-10-01T23:16:25.8321133Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/httpuv_1.6.3.tar.gz' 2021-10-01T23:16:26.3817479Z Content type 'binary/octet-stream' length 5074749 bytes (4.8 MB) 2021-10-01T23:16:26.4641639Z ================================================== 2021-10-01T23:16:26.4643825Z downloaded 4.8 MB 2021-10-01T23:16:26.4644518Z 2021-10-01T23:16:26.4694666Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/abind_1.4-5.tar.gz' 2021-10-01T23:16:27.6824890Z Content type 'binary/octet-stream' length 60401 bytes (58 KB) 2021-10-01T23:16:27.6895452Z ================================================== 2021-10-01T23:16:27.6896533Z downloaded 58 KB 2021-10-01T23:16:27.6897104Z 2021-10-01T23:16:27.6938472Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bitops_1.0-7.tar.gz' 2021-10-01T23:16:34.3489281Z Content type 'binary/octet-stream' length 35283 bytes (34 KB) 2021-10-01T23:16:34.3502683Z ================================================== 2021-10-01T23:16:34.3503684Z downloaded 34 KB 2021-10-01T23:16:34.3504145Z 2021-10-01T23:16:34.3549326Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.methodsS3_1.8.1.tar.gz' 2021-10-01T23:16:35.3594179Z Content type 'binary/octet-stream' length 77783 bytes (75 KB) 2021-10-01T23:16:35.3595626Z ================================================== 2021-10-01T23:16:35.3596989Z downloaded 75 KB 2021-10-01T23:16:35.3598327Z 2021-10-01T23:16:35.3660939Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.oo_1.24.0.tar.gz' 2021-10-01T23:16:36.2814646Z Content type 'binary/octet-stream' length 951271 bytes (928 KB) 2021-10-01T23:16:36.3468428Z ================================================== 2021-10-01T23:16:36.3469094Z downloaded 928 KB 2021-10-01T23:16:36.3469421Z 2021-10-01T23:16:36.3520198Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.utils_2.11.0.tar.gz' 2021-10-01T23:16:37.2099362Z Content type 'binary/octet-stream' length 1390065 bytes (1.3 MB) 2021-10-01T23:16:37.4275940Z ================================================== 2021-10-01T23:16:37.4276694Z downloaded 1.3 MB 2021-10-01T23:16:37.4277040Z 2021-10-01T23:16:37.4336064Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/matrixStats_0.61.0.tar.gz' 2021-10-01T23:16:38.1888072Z Content type 'binary/octet-stream' length 672239 bytes (656 KB) 2021-10-01T23:16:38.2280669Z ================================================== 2021-10-01T23:16:38.2281526Z downloaded 656 KB 2021-10-01T23:16:38.2281928Z 2021-10-01T23:16:38.2329954Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/base64enc_0.1-3.tar.gz' 2021-10-01T23:16:38.8741768Z Content type 'binary/octet-stream' length 38804 bytes (37 KB) 2021-10-01T23:16:38.8742554Z ================================================== 2021-10-01T23:16:38.8743036Z downloaded 37 KB 2021-10-01T23:16:38.8743356Z 2021-10-01T23:16:38.8801857Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/htmltools_0.5.2.tar.gz' 2021-10-01T23:16:39.6464361Z Content type 'binary/octet-stream' length 335665 bytes (327 KB) 2021-10-01T23:16:39.6842175Z ================================================== 2021-10-01T23:16:39.6843269Z downloaded 327 KB 2021-10-01T23:16:39.6843965Z 2021-10-01T23:16:39.6896279Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bit_4.0.4.tar.gz' 2021-10-01T23:16:40.5017207Z Content type 'binary/octet-stream' length 688277 bytes (672 KB) 2021-10-01T23:16:40.6608293Z ================================================== 2021-10-01T23:16:40.6609021Z downloaded 672 KB 2021-10-01T23:16:40.6609447Z 2021-10-01T23:16:40.6656390Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bit64_4.0.5.tar.gz' 2021-10-01T23:16:41.4630252Z Content type 'binary/octet-stream' length 571476 bytes (558 KB) 2021-10-01T23:16:41.5250471Z ================================================== 2021-10-01T23:16:41.5251163Z downloaded 558 KB 2021-10-01T23:16:41.5251495Z 2021-10-01T23:16:41.5299080Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tzdb_0.1.2.tar.gz' 2021-10-01T23:16:45.1548481Z Content type 'binary/octet-stream' length 1581651 bytes (1.5 MB) 2021-10-01T23:16:45.2222022Z ================================================== 2021-10-01T23:16:45.2222771Z downloaded 1.5 MB 2021-10-01T23:16:45.2223098Z 2021-10-01T23:16:45.2268924Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/vroom_1.5.5.tar.gz' 2021-10-01T23:16:45.9826899Z Content type 'binary/octet-stream' length 7319575 bytes (7.0 MB) 2021-10-01T23:16:46.0741585Z ================================================== 2021-10-01T23:16:46.0742278Z downloaded 7.0 MB 2021-10-01T23:16:46.0742605Z 2021-10-01T23:16:46.0788585Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rematch_1.0.1.tar.gz' 2021-10-01T23:16:46.8856811Z Content type 'binary/octet-stream' length 11994 bytes (11 KB) 2021-10-01T23:16:46.8915328Z ================================================== 2021-10-01T23:16:46.8915947Z downloaded 11 KB 2021-10-01T23:16:46.8916254Z 2021-10-01T23:16:46.8961856Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/progress_1.2.2.tar.gz' 2021-10-01T23:16:50.5069102Z Content type 'binary/octet-stream' length 82513 bytes (80 KB) 2021-10-01T23:16:50.5070211Z ================================================== 2021-10-01T23:16:50.5070694Z downloaded 80 KB 2021-10-01T23:16:50.5071016Z 2021-10-01T23:16:50.5110493Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cellranger_1.1.0.tar.gz' 2021-10-01T23:16:51.2938215Z Content type 'binary/octet-stream' length 100725 bytes (98 KB) 2021-10-01T23:16:51.3011569Z ================================================== 2021-10-01T23:16:51.3012576Z downloaded 98 KB 2021-10-01T23:16:51.3013317Z 2021-10-01T23:16:51.3062557Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/readr_2.0.2.tar.gz' 2021-10-01T23:16:52.1814711Z Content type 'binary/octet-stream' length 3553365 bytes (3.4 MB) 2021-10-01T23:16:52.4326407Z ================================================== 2021-10-01T23:16:52.4327765Z downloaded 3.4 MB 2021-10-01T23:16:52.4328295Z 2021-10-01T23:16:52.4379553Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/hms_1.1.1.tar.gz' 2021-10-01T23:16:53.9114134Z Content type 'binary/octet-stream' length 96962 bytes (94 KB) 2021-10-01T23:16:53.9193078Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/openxlsx_4.2.4.tar.gz' 2021-10-01T23:16:55.7224294Z Content type 'binary/octet-stream' length 4789242 bytes (4.6 MB) 2021-10-01T23:16:55.8254560Z ================================================== 2021-10-01T23:16:55.8255974Z downloaded 4.6 MB 2021-10-01T23:16:55.8256896Z 2021-10-01T23:16:55.8307376Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/readxl_1.3.1.tar.gz' 2021-10-01T23:16:56.4966917Z Content type 'binary/octet-stream' length 2956878 bytes (2.8 MB) 2021-10-01T23:16:56.5194694Z ================================================== 2021-10-01T23:16:56.5195340Z downloaded 2.8 MB 2021-10-01T23:16:56.5195671Z 2021-10-01T23:16:56.5242438Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/data.table_1.14.2.tar.gz' 2021-10-01T23:16:57.2234886Z Content type 'binary/octet-stream' length 2613058 bytes (2.5 MB) 2021-10-01T23:16:57.2648217Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/MatrixModels_0.5-0.tar.gz' 2021-10-01T23:16:59.6193338Z Content type 'binary/octet-stream' length 385948 bytes (376 KB) 2021-10-01T23:16:59.6291594Z ================================================== 2021-10-01T23:16:59.6292678Z downloaded 376 KB 2021-10-01T23:16:59.6293228Z 2021-10-01T23:16:59.6334586Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/SparseM_1.81.tar.gz' 2021-10-01T23:17:00.3891457Z Content type 'binary/octet-stream' length 1097266 bytes (1.0 MB) 2021-10-01T23:17:00.4135063Z ================================================== 2021-10-01T23:17:00.4136201Z downloaded 1.0 MB 2021-10-01T23:17:00.4136769Z 2021-10-01T23:17:00.4178908Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/numDeriv_2016.8-1.1.tar.gz' 2021-10-01T23:17:00.9563329Z Content type 'binary/octet-stream' length 112345 bytes (109 KB) 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/nloptr_1.2.2.2.tar.gz' 2021-10-01T23:17:03.5020547Z Content type 'binary/octet-stream' length 2456580 bytes (2.3 MB) 2021-10-01T23:17:03.5536355Z ================================================== 2021-10-01T23:17:03.5537695Z downloaded 2.3 MB 2021-10-01T23:17:03.5540541Z 2021-10-01T23:17:03.5595309Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/minqa_1.2.4.tar.gz' 2021-10-01T23:17:04.2142140Z Content type 'binary/octet-stream' length 494319 bytes (482 KB) 2021-10-01T23:17:04.2231960Z ================================================== 2021-10-01T23:17:04.2232617Z downloaded 482 KB 2021-10-01T23:17:04.2233771Z 2021-10-01T23:17:04.2278877Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lme4_1.1-27.1.tar.gz' 2021-10-01T23:17:04.8832948Z Content type 'binary/octet-stream' length 3308176 bytes (3.2 MB) 2021-10-01T23:17:04.9358892Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/quantreg_5.86.tar.gz' 2021-10-01T23:17:07.8678066Z Content type 'binary/octet-stream' length 1646176 bytes (1.6 MB) 2021-10-01T23:17:07.9333817Z ================================================== 2021-10-01T23:17:07.9344571Z downloaded 1.6 MB 2021-10-01T23:17:07.9345126Z 2021-10-01T23:17:07.9380320Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pbkrtest_0.5.1.tar.gz' 2021-10-01T23:17:08.4625764Z Content type 'binary/octet-stream' length 246088 bytes (240 KB) 2021-10-01T23:17:08.4673217Z ================================================== 2021-10-01T23:17:08.4673865Z downloaded 240 KB 2021-10-01T23:17:08.4674204Z 2021-10-01T23:17:08.4720042Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/carData_3.0-4.tar.gz' 2021-10-01T23:17:09.2855683Z Content type 'binary/octet-stream' length 1818403 bytes (1.7 MB) 2021-10-01T23:17:09.3331181Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/corrplot_0.90.tar.gz' 2021-10-01T23:17:11.1694642Z Content type 'binary/octet-stream' length 2892443 bytes (2.8 MB) 2021-10-01T23:17:11.1876699Z ================================================== 2021-10-01T23:17:11.1877369Z downloaded 2.8 MB 2021-10-01T23:17:11.1877722Z 2021-10-01T23:17:11.1923215Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/broom_0.7.9.tar.gz' 2021-10-01T23:17:12.0603074Z Content type 'binary/octet-stream' length 1766860 bytes (1.7 MB) 2021-10-01T23:17:12.0886691Z ================================================== 2021-10-01T23:17:12.0887357Z downloaded 1.7 MB 2021-10-01T23:17:12.0887669Z 2021-10-01T23:17:12.0937526Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gtable_0.3.0.tar.gz' 2021-10-01T23:17:12.8993067Z Content type 'binary/octet-stream' length 430851 bytes (420 KB) 2021-10-01T23:17:12.9089242Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/RColorBrewer_1.1-2.tar.gz' 2021-10-01T23:17:15.2308964Z Content type 'binary/octet-stream' length 52719 bytes (51 KB) 2021-10-01T23:17:15.2310462Z ================================================== 2021-10-01T23:17:15.2311341Z downloaded 51 KB 2021-10-01T23:17:15.2311904Z 2021-10-01T23:17:15.2376240Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/munsell_0.5.0.tar.gz' 2021-10-01T23:17:15.9925012Z Content type 'binary/octet-stream' length 242567 bytes (236 KB) 2021-10-01T23:17:15.9968425Z ================================================== 2021-10-01T23:17:15.9969287Z downloaded 236 KB 2021-10-01T23:17:15.9969750Z 2021-10-01T23:17:16.0013886Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/labeling_0.4.2.tar.gz' 2021-10-01T23:17:16.7325152Z Content type 'binary/octet-stream' length 59652 bytes (58 KB) 2021-10-01T23:17:16.7326985Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/isoband_0.2.5.tar.gz' 2021-10-01T23:17:19.0661765Z Content type 'binary/octet-stream' length 4274630 bytes (4.1 MB) 2021-10-01T23:17:19.1212992Z ================================================== 2021-10-01T23:17:19.1213697Z downloaded 4.1 MB 2021-10-01T23:17:19.1214022Z 2021-10-01T23:17:19.1259823Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ggplot2_3.3.5.tar.gz' 2021-10-01T23:17:20.0306406Z Content type 'binary/octet-stream' length 4106369 bytes (3.9 MB) 2021-10-01T23:17:20.0772350Z ================================================== 2021-10-01T23:17:20.0773027Z downloaded 3.9 MB 2021-10-01T23:17:20.0773334Z 2021-10-01T23:17:20.0819043Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gridExtra_2.3.tar.gz' 2021-10-01T23:17:21.4882269Z Content type 'binary/octet-stream' length 1105756 bytes (1.1 MB) 2021-10-01T23:17:21.5001921Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/neurobase_1.32.1.tar.gz' 2021-10-01T23:17:23.3536167Z Content type 'binary/octet-stream' length 1769491 bytes (1.7 MB) 2021-10-01T23:17:23.4307148Z ================================================== 2021-10-01T23:17:23.4307832Z downloaded 1.7 MB 2021-10-01T23:17:23.4308153Z 2021-10-01T23:17:23.4354740Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/jquerylib_0.1.4.tar.gz' 2021-10-01T23:17:23.9778325Z Content type 'binary/octet-stream' length 526342 bytes (514 KB) 2021-10-01T23:17:23.9836835Z ================================================== 2021-10-01T23:17:23.9838162Z downloaded 514 KB 2021-10-01T23:17:23.9838822Z 2021-10-01T23:17:23.9885636Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tinytex_0.34.tar.gz' 2021-10-01T23:17:24.5141012Z Content type 'binary/octet-stream' length 120017 bytes (117 KB) 2021-10-01T23:17:24.5174410Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ggsignif_0.6.3.tar.gz' 2021-10-01T23:17:26.5191717Z Content type 'binary/octet-stream' length 600589 bytes (586 KB) 2021-10-01T23:17:26.5262418Z ================================================== 2021-10-01T23:17:26.5263168Z downloaded 586 KB 2021-10-01T23:17:26.5263593Z 2021-10-01T23:17:26.5310076Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cowplot_1.1.1.tar.gz' 2021-10-01T23:17:27.2212212Z Content type 'binary/octet-stream' length 1375200 bytes (1.3 MB) 2021-10-01T23:17:27.2346103Z ================================================== 2021-10-01T23:17:27.2346760Z downloaded 1.3 MB 2021-10-01T23:17:27.2347072Z 2021-10-01T23:17:27.2399150Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ggsci_2.9.tar.gz' 2021-10-01T23:17:27.9069425Z Content type 'binary/octet-stream' length 2974901 bytes (2.8 MB) 2021-10-01T23:17:28.1274109Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/htmlwidgets_1.5.4.tar.gz' 2021-10-01T23:17:30.0124638Z Content type 'binary/octet-stream' length 904760 bytes (883 KB) 2021-10-01T23:17:30.0287511Z ================================================== 2021-10-01T23:17:30.0289422Z downloaded 883 KB 2021-10-01T23:17:30.0290404Z 2021-10-01T23:17:30.0331926Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/maps_3.4.0.tar.gz' 2021-10-01T23:17:30.6535921Z Content type 'binary/octet-stream' length 3126087 bytes (3.0 MB) 2021-10-01T23:17:30.8057122Z ================================================== 2021-10-01T23:17:30.8060875Z downloaded 3.0 MB 2021-10-01T23:17:30.8061454Z 2021-10-01T23:17:30.8131747Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/viridis_0.6.1.tar.gz' 2021-10-01T23:17:31.4965304Z Content type 'binary/octet-stream' length 3019953 bytes (2.9 MB) 2021-10-01T23:17:31.5290743Z 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================================================== 2021-10-01T23:17:36.6505218Z downloaded 3.8 MB 2021-10-01T23:17:36.6505686Z 2021-10-01T23:17:37.7334671Z * installing *binary* package ‘Rcpp’ ... 2021-10-01T23:17:37.7817185Z * DONE (Rcpp) 2021-10-01T23:17:38.0310987Z * installing *binary* package ‘abind’ ... 2021-10-01T23:17:38.0381611Z * DONE (abind) 2021-10-01T23:17:38.2559805Z * installing *binary* package ‘bitops’ ... 2021-10-01T23:17:38.2630435Z * DONE (bitops) 2021-10-01T23:17:38.4839160Z * installing *binary* package ‘R.methodsS3’ ... 2021-10-01T23:17:38.4912050Z * DONE (R.methodsS3) 2021-10-01T23:17:38.8180427Z * installing *binary* package ‘matrixStats’ ... 2021-10-01T23:17:38.8311871Z * DONE (matrixStats) 2021-10-01T23:17:39.0526969Z * installing *binary* package ‘base64enc’ ... 2021-10-01T23:17:39.0606416Z * DONE (base64enc) 2021-10-01T23:17:39.3474232Z * installing *binary* package ‘bit’ ... 2021-10-01T23:17:39.3541631Z * DONE (bit) 2021-10-01T23:17:39.7897613Z * installing *binary* package ‘tzdb’ ... 2021-10-01T23:17:39.8030296Z * DONE (tzdb) 2021-10-01T23:17:40.0211344Z * installing *binary* package ‘rematch’ ... 2021-10-01T23:17:40.0255433Z * DONE (rematch) 2021-10-01T23:17:40.2608903Z * installing *binary* package ‘hms’ ... 2021-10-01T23:17:40.2709950Z * DONE (hms) 2021-10-01T23:17:40.5237077Z * installing *binary* package ‘forcats’ ... 2021-10-01T23:17:40.5300949Z * DONE (forcats) 2021-10-01T23:17:40.9801059Z * installing *binary* package ‘data.table’ ... 2021-10-01T23:17:40.9931765Z * DONE (data.table) 2021-10-01T23:17:41.2321150Z * installing *binary* package ‘MatrixModels’ ... 2021-10-01T23:17:41.2367751Z * DONE (MatrixModels) 2021-10-01T23:17:41.5394357Z * installing *binary* package ‘SparseM’ ... 2021-10-01T23:17:41.5464563Z * DONE (SparseM) 2021-10-01T23:17:41.7719709Z * installing *binary* package ‘numDeriv’ ... 2021-10-01T23:17:41.7766276Z * DONE (numDeriv) 2021-10-01T23:17:42.1016190Z * installing *binary* package ‘sp’ ... 2021-10-01T23:17:42.1095961Z * DONE (sp) 2021-10-01T23:17:42.6737249Z * installing *source* package ‘nloptr’ ... 2021-10-01T23:17:42.6948054Z ** package ‘nloptr’ successfully unpacked and MD5 sums checked 2021-10-01T23:17:43.2168716Z 2021-10-01T23:17:43.2830651Z checking whether the C++ compiler works... yes 2021-10-01T23:17:43.2832263Z checking for C++ compiler default output file name... a.out 2021-10-01T23:17:43.3427564Z checking for suffix of executables... 2021-10-01T23:17:43.4168384Z checking whether we are cross compiling... no 2021-10-01T23:17:43.4529155Z checking for suffix of object files... o 2021-10-01T23:17:43.4802643Z checking whether we are using the GNU C++ compiler... yes 2021-10-01T23:17:43.5066435Z checking whether g++ accepts -g... yes 2021-10-01T23:17:43.5073231Z checking how to run the C++ preprocessor... g++ -E 2021-10-01T23:17:43.5593039Z checking whether we are using the GNU C++ compiler... (cached) yes 2021-10-01T23:17:43.5595166Z checking whether g++ accepts -g... (cached) yes 2021-10-01T23:17:43.5602535Z checking for pkg-config... yes 2021-10-01T23:17:43.5644621Z configure: Now testing for NLopt header file. 2021-10-01T23:17:43.5674942Z checking for grep that handles long lines and -e... /usr/bin/grep 2021-10-01T23:17:43.5698691Z checking for egrep... /usr/bin/grep -E 2021-10-01T23:17:43.7377412Z checking for ANSI C header files... yes 2021-10-01T23:17:43.7852750Z checking for sys/types.h... yes 2021-10-01T23:17:43.8447563Z checking for sys/stat.h... yes 2021-10-01T23:17:43.8977391Z checking for stdlib.h... yes 2021-10-01T23:17:43.9545632Z checking for string.h... yes 2021-10-01T23:17:44.0124624Z checking for memory.h... yes 2021-10-01T23:17:44.0699072Z checking for strings.h... yes 2021-10-01T23:17:44.1285725Z checking for inttypes.h... yes 2021-10-01T23:17:44.1878746Z checking for stdint.h... yes 2021-10-01T23:17:44.2534201Z checking for unistd.h... yes 2021-10-01T23:17:44.3022735Z checking nlopt.h usability... no 2021-10-01T23:17:44.3171723Z checking nlopt.h presence... no 2021-10-01T23:17:44.3172970Z checking for nlopt.h... no 2021-10-01T23:17:44.3177393Z configure: Need to configure and build NLopt 2021-10-01T23:17:44.3569902Z configure: Starting to install library to /tmp/Rtmp9XJ1Lu/R.INSTALLa13f40a33d30/nloptr/src/nlopt_src 2021-10-01T23:17:44.5692422Z checking for a BSD-compatible install... /usr/bin/install -c 2021-10-01T23:17:44.5739670Z checking whether build environment is sane... yes 2021-10-01T23:17:44.5861099Z checking for a thread-safe mkdir -p... /usr/bin/mkdir -p 2021-10-01T23:17:44.5870830Z checking for gawk... gawk 2021-10-01T23:17:44.6042012Z checking whether make sets $(MAKE)... yes 2021-10-01T23:17:44.6115147Z checking whether make supports nested variables... yes 2021-10-01T23:17:44.6261448Z checking whether to enable maintainer-specific portions of Makefiles... no 2021-10-01T23:17:44.6281950Z checking for gcc... gcc 2021-10-01T23:17:44.7113974Z checking whether the C compiler works... yes 2021-10-01T23:17:44.7115379Z checking for C compiler default output file name... a.out 2021-10-01T23:17:44.7575193Z checking for suffix of executables... 2021-10-01T23:17:44.8124902Z checking whether we are cross compiling... no 2021-10-01T23:17:44.8408984Z checking for suffix of object files... o 2021-10-01T23:17:44.8670882Z checking whether we are using the GNU C compiler... yes 2021-10-01T23:17:44.8915578Z checking whether gcc accepts -g... yes 2021-10-01T23:17:44.9338395Z checking for gcc option to accept ISO C89... none needed 2021-10-01T23:17:44.9797893Z checking whether gcc understands -c and -o together... yes 2021-10-01T23:17:44.9851626Z checking for style of include used by make... 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ERROR: no information for variable 'RANLIB' 2021-10-01T23:17:45.4934512Z checking command to parse /usr/bin/nm -B output from gcc object... ok 2021-10-01T23:17:45.4959217Z checking for sysroot... no 2021-10-01T23:17:45.5701957Z checking for mt... mt 2021-10-01T23:17:45.6101262Z checking if mt is a manifest tool... no 2021-10-01T23:17:45.6128928Z checking how to run the C preprocessor... gcc -E 2021-10-01T23:17:45.7670185Z checking for ANSI C header files... yes 2021-10-01T23:17:45.8011746Z checking for sys/types.h... yes 2021-10-01T23:17:45.8433247Z checking for sys/stat.h... yes 2021-10-01T23:17:45.8843299Z checking for stdlib.h... yes 2021-10-01T23:17:45.9274736Z checking for string.h... yes 2021-10-01T23:17:45.9722747Z checking for memory.h... yes 2021-10-01T23:17:46.0171044Z checking for strings.h... yes 2021-10-01T23:17:46.0636803Z checking for inttypes.h... yes 2021-10-01T23:17:46.1087981Z checking for stdint.h... yes 2021-10-01T23:17:46.1599371Z checking for unistd.h... yes 2021-10-01T23:17:46.2159755Z checking for dlfcn.h... yes 2021-10-01T23:17:46.2223566Z checking for objdir... .libs 2021-10-01T23:17:46.3498166Z checking if gcc supports -fno-rtti -fno-exceptions... no 2021-10-01T23:17:46.3499904Z checking for gcc option to produce PIC... -fPIC -DPIC 2021-10-01T23:17:46.3779101Z checking if gcc PIC flag -fPIC -DPIC works... yes 2021-10-01T23:17:47.1103345Z checking if gcc static flag -static works... yes 2021-10-01T23:17:47.1543050Z checking if gcc supports -c -o file.o... yes 2021-10-01T23:17:47.1544656Z checking if gcc supports -c -o file.o... 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(cached) yes 2021-10-01T23:17:48.0195553Z checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes 2021-10-01T23:17:48.0259574Z checking dynamic linker characteristics... (cached) GNU/Linux ld.so 2021-10-01T23:17:48.0261027Z checking how to hardcode library paths into programs... immediate 2021-10-01T23:17:48.0275557Z checking for ANSI C header files... (cached) yes 2021-10-01T23:17:48.0662979Z checking whether time.h and sys/time.h may both be included... yes 2021-10-01T23:17:48.0706924Z checking for unistd.h... (cached) yes 2021-10-01T23:17:48.1424131Z checking getopt.h usability... yes 2021-10-01T23:17:48.1544046Z checking getopt.h presence... yes 2021-10-01T23:17:48.1545277Z checking for getopt.h... yes 2021-10-01T23:17:48.1634098Z checking for stdint.h... 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luksan/Makefile 2021-10-01T23:17:50.7207209Z config.status: creating crs/Makefile 2021-10-01T23:17:50.7408725Z config.status: creating mlsl/Makefile 2021-10-01T23:17:50.7641804Z config.status: creating mma/Makefile 2021-10-01T23:17:50.7841474Z config.status: creating cobyla/Makefile 2021-10-01T23:17:50.8038040Z config.status: creating newuoa/Makefile 2021-10-01T23:17:50.8233390Z config.status: creating neldermead/Makefile 2021-10-01T23:17:50.8428797Z config.status: creating auglag/Makefile 2021-10-01T23:17:50.8626159Z config.status: creating bobyqa/Makefile 2021-10-01T23:17:50.8831362Z config.status: creating isres/Makefile 2021-10-01T23:17:50.9058806Z config.status: creating slsqp/Makefile 2021-10-01T23:17:50.9275650Z config.status: creating esch/Makefile 2021-10-01T23:17:50.9472239Z config.status: creating test/Makefile 2021-10-01T23:17:50.9673764Z config.status: creating swig/Makefile 2021-10-01T23:17:50.9874227Z config.status: creating swig/nlopt.scm 2021-10-01T23:17:51.0088985Z config.status: creating config.h 2021-10-01T23:17:51.0218370Z config.status: executing depfiles commands 2021-10-01T23:17:51.5477859Z config.status: executing libtool commands 2021-10-01T23:17:51.7021707Z make all-recursive 2021-10-01T23:17:51.7052397Z make[1]: Entering directory '/tmp/Rtmp9XJ1Lu/R.INSTALLa13f40a33d30/nloptr/src/nlopt_src' 2021-10-01T23:17:51.7098974Z Making all in util 2021-10-01T23:17:51.7123511Z make[2]: Entering directory '/tmp/Rtmp9XJ1Lu/R.INSTALLa13f40a33d30/nloptr/src/nlopt_src/util' 2021-10-01T23:17:51.7125942Z /bin/bash ../libtool --tag=CC --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT mt19937ar.lo -MD -MP -MF .deps/mt19937ar.Tpo -c -o mt19937ar.lo mt19937ar.c 2021-10-01T23:17:51.7323062Z libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT mt19937ar.lo -MD -MP -MF .deps/mt19937ar.Tpo -c mt19937ar.c -fPIC -DPIC -o .libs/mt19937ar.o 2021-10-01T23:17:51.8581656Z libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT mt19937ar.lo -MD -MP -MF .deps/mt19937ar.Tpo -c mt19937ar.c -o mt19937ar.o >/dev/null 2>&1 2021-10-01T23:17:51.9810494Z mv -f .deps/mt19937ar.Tpo .deps/mt19937ar.Plo 2021-10-01T23:17:51.9837717Z /bin/bash ../libtool --tag=CC --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT sobolseq.lo -MD -MP -MF .deps/sobolseq.Tpo -c -o sobolseq.lo sobolseq.c 2021-10-01T23:17:52.0020628Z libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT sobolseq.lo -MD -MP -MF .deps/sobolseq.Tpo -c sobolseq.c -fPIC -DPIC -o .libs/sobolseq.o 2021-10-01T23:17:52.2040428Z libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT sobolseq.lo -MD -MP -MF .deps/sobolseq.Tpo -c sobolseq.c -o sobolseq.o >/dev/null 2>&1 2021-10-01T23:17:52.4138600Z mv -f .deps/sobolseq.Tpo .deps/sobolseq.Plo 2021-10-01T23:17:52.4175188Z /bin/bash ../libtool --tag=CC --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT timer.lo -MD -MP -MF .deps/timer.Tpo -c -o timer.lo timer.c 2021-10-01T23:17:52.4354611Z libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT timer.lo -MD -MP -MF .deps/timer.Tpo -c timer.c -fPIC -DPIC -o .libs/timer.o 2021-10-01T23:17:52.5312081Z libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT timer.lo -MD -MP -MF .deps/timer.Tpo -c timer.c -o timer.o >/dev/null 2>&1 2021-10-01T23:17:52.6233676Z mv -f .deps/timer.Tpo .deps/timer.Plo 2021-10-01T23:17:52.6262676Z /bin/bash ../libtool --tag=CC --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT stop.lo -MD -MP -MF .deps/stop.Tpo -c -o stop.lo stop.c 2021-10-01T23:17:52.6464720Z libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT stop.lo -MD -MP -MF .deps/stop.Tpo -c stop.c -fPIC -DPIC -o .libs/stop.o 2021-10-01T23:17:52.7900457Z libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT stop.lo -MD -MP -MF .deps/stop.Tpo -c stop.c -o stop.o >/dev/null 2>&1 2021-10-01T23:17:52.9370573Z mv -f .deps/stop.Tpo .deps/stop.Plo 2021-10-01T23:17:52.9397834Z /bin/bash ../libtool --tag=CC --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT redblack.lo -MD -MP -MF .deps/redblack.Tpo -c -o redblack.lo redblack.c 2021-10-01T23:17:52.9576618Z libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT redblack.lo -MD -MP -MF .deps/redblack.Tpo -c redblack.c -fPIC -DPIC -o .libs/redblack.o 2021-10-01T23:17:53.1726588Z libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT redblack.lo -MD -MP -MF .deps/redblack.Tpo -c redblack.c -o redblack.o >/dev/null 2>&1 2021-10-01T23:17:53.3829885Z mv -f .deps/redblack.Tpo .deps/redblack.Plo 2021-10-01T23:17:53.3859515Z /bin/bash ../libtool --tag=CC --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT qsort_r.lo -MD -MP -MF .deps/qsort_r.Tpo -c -o qsort_r.lo qsort_r.c 2021-10-01T23:17:53.4038845Z libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT qsort_r.lo -MD -MP -MF .deps/qsort_r.Tpo -c qsort_r.c -fPIC -DPIC -o .libs/qsort_r.o 2021-10-01T23:17:53.5150344Z libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT qsort_r.lo -MD -MP -MF .deps/qsort_r.Tpo -c qsort_r.c -o qsort_r.o >/dev/null 2>&1 2021-10-01T23:17:53.6315208Z mv -f .deps/qsort_r.Tpo .deps/qsort_r.Plo 2021-10-01T23:17:53.6349242Z /bin/bash ../libtool --tag=CC --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT rescale.lo -MD -MP -MF .deps/rescale.Tpo -c -o rescale.lo rescale.c 2021-10-01T23:17:53.6528720Z libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT rescale.lo -MD -MP -MF .deps/rescale.Tpo -c rescale.c -fPIC -DPIC -o .libs/rescale.o 2021-10-01T23:17:53.7680153Z libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I../api -g -O2 -MT rescale.lo -MD -MP -MF .deps/rescale.Tpo -c rescale.c -o rescale.o >/dev/null 2>&1 2021-10-01T23:17:53.8908686Z mv -f .deps/rescale.Tpo .deps/rescale.Plo 2021-10-01T23:17:53.8935948Z /bin/bash ../libtool --tag=CC --mode=link g++ -g -O2 -o libutil.la mt19937ar.lo sobolseq.lo timer.lo stop.lo redblack.lo qsort_r.lo rescale.lo -lm 2021-10-01T23:17:53.9555350Z libtool: link: ERROR: no information for variable 'AR' cru .libs/libutil.a .libs/mt19937ar.o .libs/sobolseq.o .libs/timer.o .libs/stop.o .libs/redblack.o .libs/qsort_r.o .libs/rescale.o 2021-10-01T23:17:53.9557826Z ../libtool: line 1102: ERROR:: command not found 2021-10-01T23:17:53.9571342Z make[2]: *** [Makefile:371: libutil.la] Error 127 2021-10-01T23:17:53.9573168Z make[2]: Leaving directory '/tmp/Rtmp9XJ1Lu/R.INSTALLa13f40a33d30/nloptr/src/nlopt_src/util' 2021-10-01T23:17:53.9578560Z make[1]: Leaving directory '/tmp/Rtmp9XJ1Lu/R.INSTALLa13f40a33d30/nloptr/src/nlopt_src' 2021-10-01T23:17:53.9580889Z make[1]: *** [Makefile:574: all-recursive] Error 1 2021-10-01T23:17:53.9581871Z make: *** [Makefile:438: all] Error 2 2021-10-01T23:17:53.9859733Z ERROR: configuration failed for package ‘nloptr’ 2021-10-01T23:17:53.9861453Z * removing ‘/home/runner/work/_temp/Library/nloptr’ 2021-10-01T23:17:54.3213274Z * installing *binary* package ‘carData’ ... 2021-10-01T23:17:54.3288697Z * DONE (carData) 2021-10-01T23:17:54.5553391Z * installing *binary* package ‘backports’ ... 2021-10-01T23:17:54.5599790Z * DONE (backports) 2021-10-01T23:17:54.9323309Z * installing *binary* package ‘corrplot’ ... 2021-10-01T23:17:54.9421361Z * DONE (corrplot) 2021-10-01T23:17:55.2454911Z * installing *binary* package ‘gtable’ ... 2021-10-01T23:17:55.2520005Z * DONE (gtable) 2021-10-01T23:17:55.6907114Z * installing *binary* package ‘colorspace’ ... 2021-10-01T23:17:55.7044941Z * DONE (colorspace) 2021-10-01T23:17:55.9705501Z * installing *binary* package ‘viridisLite’ ... 2021-10-01T23:17:55.9770691Z * DONE (viridisLite) 2021-10-01T23:17:56.1933357Z * installing *binary* package ‘RColorBrewer’ ... 2021-10-01T23:17:56.1976643Z * DONE (RColorBrewer) 2021-10-01T23:17:56.4171946Z * installing *binary* package ‘labeling’ ... 2021-10-01T23:17:56.4215249Z * DONE (labeling) 2021-10-01T23:17:56.9074666Z * installing *binary* package ‘farver’ ... 2021-10-01T23:17:56.9192475Z * DONE (farver) 2021-10-01T23:17:57.5700662Z * installing *binary* package ‘isoband’ ... 2021-10-01T23:17:57.5878796Z * DONE (isoband) 2021-10-01T23:17:57.8216705Z * installing *binary* package ‘dotCall64’ ... 2021-10-01T23:17:57.8281980Z * DONE (dotCall64) 2021-10-01T23:17:58.0545621Z * installing *binary* package ‘tinytex’ ... 2021-10-01T23:17:58.0621200Z * DONE (tinytex) 2021-10-01T23:17:58.3126447Z * installing *binary* package ‘polynom’ ... 2021-10-01T23:17:58.3175788Z * DONE (polynom) 2021-10-01T23:17:58.7060299Z * installing *binary* package ‘maps’ ... 2021-10-01T23:17:58.7153840Z * DONE (maps) 2021-10-01T23:17:59.1637632Z * installing *binary* package ‘oro.nifti’ ... 2021-10-01T23:17:59.1833668Z * DONE (oro.nifti) 2021-10-01T23:17:59.5576750Z * installing *binary* package ‘later’ ... 2021-10-01T23:17:59.5724327Z * DONE (later) 2021-10-01T23:17:59.8465145Z * installing *binary* package ‘R.oo’ ... 2021-10-01T23:17:59.8547669Z * DONE (R.oo) 2021-10-01T23:18:00.1083086Z * installing *binary* package ‘htmltools’ ... 2021-10-01T23:18:00.1167254Z * DONE (htmltools) 2021-10-01T23:18:00.3913262Z * installing *binary* package ‘bit64’ ... 2021-10-01T23:18:00.3984186Z * DONE (bit64) 2021-10-01T23:18:00.6272589Z * installing *binary* package ‘progress’ ... 2021-10-01T23:18:00.6320861Z * DONE (progress) 2021-10-01T23:18:00.8598512Z * installing *binary* package ‘cellranger’ ... 2021-10-01T23:18:00.8646797Z * DONE (cellranger) 2021-10-01T23:18:01.6316680Z * installing *source* package ‘RcppArmadillo’ ... 2021-10-01T23:18:01.6645977Z ** package ‘RcppArmadillo’ successfully unpacked and MD5 sums checked 2021-10-01T23:18:01.9531425Z checking whether the C++ compiler works... yes 2021-10-01T23:18:01.9532823Z checking for C++ compiler default output file name... a.out 2021-10-01T23:18:02.0110713Z checking for suffix of executables... 2021-10-01T23:18:02.0903074Z checking whether we are cross compiling... no 2021-10-01T23:18:02.1203133Z checking for suffix of object files... o 2021-10-01T23:18:02.1465501Z checking whether we are using the GNU C++ compiler... yes 2021-10-01T23:18:02.1726194Z checking whether g++ accepts -g... yes 2021-10-01T23:18:02.1989753Z checking how to run the C++ preprocessor... g++ -E 2021-10-01T23:18:02.2489710Z checking whether we are using the GNU C++ compiler... (cached) yes 2021-10-01T23:18:02.2491507Z checking whether g++ accepts -g... (cached) yes 2021-10-01T23:18:02.4151281Z checking whether we have a suitable tempdir... /tmp 2021-10-01T23:18:02.5644196Z checking whether R CMD SHLIB can already compile programs using OpenMP... yes 2021-10-01T23:18:02.6091268Z checking LAPACK_LIBS... system LAPACK found 2021-10-01T23:18:02.6326172Z configure: creating ./config.status 2021-10-01T23:18:02.7314695Z config.status: creating inst/include/RcppArmadilloConfigGenerated.h 2021-10-01T23:18:02.7548848Z config.status: creating src/Makevars 2021-10-01T23:18:02.8103104Z ** libs 2021-10-01T23:18:02.8167603Z g++ -std=gnu++11 -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -I../inst/include -fpic -g -O2 -c RcppArmadillo.cpp -o RcppArmadillo.o 2021-10-01T23:18:10.0534752Z g++ -std=gnu++11 -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -I../inst/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-10-01T23:18:18.0724811Z g++ -std=gnu++11 -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/Rcpp/include" -I/usr/local/include -I../inst/include -fpic -g -O2 -c fastLm.cpp -o fastLm.o 2021-10-01T23:18:28.5521921Z g++ -std=gnu++11 -shared -L/opt/R/3.5.3/lib/R/lib -L/usr/local/lib -o RcppArmadillo.so RcppArmadillo.o RcppExports.o fastLm.o -llapack -lblas -lgfortran -lm -lquadmath -L/opt/R/3.5.3/lib/R/lib -lR 2021-10-01T23:18:28.6916210Z installing to /home/runner/work/_temp/Library/RcppArmadillo/libs 2021-10-01T23:18:28.6975774Z ** R 2021-10-01T23:18:28.7013585Z ** inst 2021-10-01T23:18:28.7478622Z ** byte-compile and prepare package for lazy loading 2021-10-01T23:18:28.9967288Z ** help 2021-10-01T23:18:29.0236740Z *** installing help indices 2021-10-01T23:18:29.0842207Z ** building package indices 2021-10-01T23:18:29.1001957Z ** installing vignettes 2021-10-01T23:18:29.1036034Z ** testing if installed package can be loaded 2021-10-01T23:18:29.3823491Z * DONE (RcppArmadillo) 2021-10-01T23:18:30.0965900Z * installing *binary* package ‘openxlsx’ ... 2021-10-01T23:18:30.1153641Z * DONE (openxlsx) 2021-10-01T23:18:31.8807082Z * installing *binary* package ‘RcppEigen’ ... 2021-10-01T23:18:31.9469546Z * DONE (RcppEigen) 2021-10-01T23:18:32.2424816Z * installing *binary* package ‘minqa’ ... 2021-10-01T23:18:32.2482850Z * DONE (minqa) 2021-10-01T23:18:32.6177271Z * installing *binary* package ‘maptools’ ... 2021-10-01T23:18:32.6272707Z * DONE (maptools) 2021-10-01T23:18:32.9689857Z * installing *binary* package ‘broom’ ... 2021-10-01T23:18:32.9769588Z * DONE (broom) 2021-10-01T23:18:33.2178431Z * installing *binary* package ‘munsell’ ... 2021-10-01T23:18:33.2229570Z * DONE (munsell) 2021-10-01T23:18:33.5230915Z * installing *binary* package ‘gridExtra’ ... 2021-10-01T23:18:33.5313486Z * DONE (gridExtra) 2021-10-01T23:18:33.8919259Z * installing *binary* package ‘spam’ ... 2021-10-01T23:18:33.9006934Z * DONE (spam) 2021-10-01T23:18:34.2675285Z * installing *binary* package ‘promises’ ... 2021-10-01T23:18:34.2791132Z * DONE (promises) 2021-10-01T23:18:34.5612607Z * installing *binary* package ‘R.utils’ ... 2021-10-01T23:18:34.5703735Z * DONE (R.utils) 2021-10-01T23:18:35.6654749Z * installing *binary* package ‘vroom’ ... 2021-10-01T23:18:35.6960989Z * DONE (vroom) 2021-10-01T23:18:36.2465231Z * installing *binary* package ‘readxl’ ... 2021-10-01T23:18:36.2598090Z * DONE (readxl) 2021-10-01T23:18:36.6389657Z * installing *binary* package ‘conquer’ ... 2021-10-01T23:18:36.6474532Z * DONE (conquer) 2021-10-01T23:18:37.1913929Z ERROR: dependency ‘nloptr’ is not available for package ‘lme4’ 2021-10-01T23:18:37.1915296Z * removing ‘/home/runner/work/_temp/Library/lme4’ 2021-10-01T23:18:37.4462398Z * installing *binary* package ‘scales’ ... 2021-10-01T23:18:37.4519631Z * DONE (scales) 2021-10-01T23:18:37.7467750Z * installing *binary* package ‘jquerylib’ ... 2021-10-01T23:18:37.7558849Z * DONE (jquerylib) 2021-10-01T23:18:38.0995937Z * installing *binary* package ‘crosstalk’ ... 2021-10-01T23:18:38.1087561Z * DONE (crosstalk) 2021-10-01T23:18:38.4256660Z * installing *binary* package ‘htmlwidgets’ ... 2021-10-01T23:18:38.4328864Z * DONE (htmlwidgets) 2021-10-01T23:18:39.2430877Z * installing *binary* package ‘httpuv’ ... 2021-10-01T23:18:39.2699772Z * DONE (httpuv) 2021-10-01T23:18:39.8757134Z * installing *binary* package ‘readr’ ... 2021-10-01T23:18:39.8905651Z * DONE (readr) 2021-10-01T23:18:40.2139850Z * installing *binary* package ‘quantreg’ ... 2021-10-01T23:18:40.2218630Z * DONE (quantreg) 2021-10-01T23:18:40.4886554Z ERROR: dependency ‘lme4’ is not available for package ‘pbkrtest’ 2021-10-01T23:18:40.4888421Z * removing ‘/home/runner/work/_temp/Library/pbkrtest’ 2021-10-01T23:18:40.9099971Z * installing *binary* package ‘ggplot2’ ... 2021-10-01T23:18:40.9196855Z * DONE (ggplot2) 2021-10-01T23:18:41.2440816Z * installing *binary* package ‘neurobase’ ... 2021-10-01T23:18:41.2540804Z * DONE (neurobase) 2021-10-01T23:18:41.9287287Z * installing *binary* package ‘rmarkdown’ ... 2021-10-01T23:18:41.9536889Z * DONE (rmarkdown) 2021-10-01T23:18:42.6408856Z * installing *binary* package ‘rgl’ ... 2021-10-01T23:18:42.6592846Z * DONE (rgl) 2021-10-01T23:18:43.0737529Z * installing *binary* package ‘haven’ ... 2021-10-01T23:18:43.0842133Z * DONE (haven) 2021-10-01T23:18:43.3221087Z * installing *binary* package ‘servr’ ... 2021-10-01T23:18:43.3298341Z * DONE (servr) 2021-10-01T23:18:43.5961454Z * installing *binary* package ‘ggsignif’ ... 2021-10-01T23:18:43.6018497Z * DONE (ggsignif) 2021-10-01T23:18:43.9024480Z * installing *binary* package ‘cowplot’ ... 2021-10-01T23:18:43.9102298Z * DONE (cowplot) 2021-10-01T23:18:44.2829753Z * installing *binary* package ‘ggsci’ ... 2021-10-01T23:18:44.2917290Z * DONE (ggsci) 2021-10-01T23:18:44.6168870Z * installing *binary* package ‘ggrepel’ ... 2021-10-01T23:18:44.6330026Z * DONE (ggrepel) 2021-10-01T23:18:44.9916909Z * installing *binary* package ‘viridis’ ... 2021-10-01T23:18:45.0008652Z * DONE (viridis) 2021-10-01T23:18:45.2908510Z * installing *binary* package ‘rio’ ... 2021-10-01T23:18:45.2970250Z * DONE (rio) 2021-10-01T23:18:45.6771182Z * installing *binary* package ‘fields’ ... 2021-10-01T23:18:45.6885578Z * DONE (fields) 2021-10-01T23:18:46.0286077Z ERROR: dependencies ‘pbkrtest’, ‘lme4’ are not available for package ‘car’ 2021-10-01T23:18:46.0289144Z * removing ‘/home/runner/work/_temp/Library/car’ 2021-10-01T23:18:46.3785170Z ERROR: dependency ‘car’ is not available for package ‘rstatix’ 2021-10-01T23:18:46.3787207Z * removing ‘/home/runner/work/_temp/Library/rstatix’ 2021-10-01T23:18:46.7950785Z ERROR: dependency ‘rstatix’ is not available for package ‘ggpubr’ 2021-10-01T23:18:46.7952802Z * removing ‘/home/runner/work/_temp/Library/ggpubr’ 2021-10-01T23:18:46.8058574Z 2021-10-01T23:18:46.8059882Z The downloaded source packages are in 2021-10-01T23:18:46.8061431Z ‘/tmp/RtmphXQJ1r/downloaded_packages’ 2021-10-01T23:18:46.9021439Z Skipping install of 'RNifti' from a github remote, the SHA1 (929106d1) has not changed since last install. 2021-10-01T23:18:46.9023809Z Use `force = TRUE` to force installation 2021-10-01T23:18:46.9825893Z Skipping install of 'gifti' from a github remote, the SHA1 (e3ff5e0b) has not changed since last install. 2021-10-01T23:18:46.9828006Z Use `force = TRUE` to force installation 2021-10-01T23:18:47.0607168Z Downloading GitHub repo neuroconductor/oro.nifti@bd06b05d2a090c743e51d745a826e8b77af278f0 2021-10-01T23:18:49.7632020Z 2021-10-01T23:18:49.9796171Z 2021-10-01T23:18:49.9804776Z checking for file ‘/tmp/RtmphXQJ1r/remotes9d446a3656b/neuroconductor-oro.nifti-bd06b05/DESCRIPTION’ ... 2021-10-01T23:18:49.9855469Z 2021-10-01T23:18:49.9858621Z ✔ checking for file ‘/tmp/RtmphXQJ1r/remotes9d446a3656b/neuroconductor-oro.nifti-bd06b05/DESCRIPTION’ 2021-10-01T23:18:50.0096832Z 2021-10-01T23:18:50.0138435Z 2021-10-01T23:18:50.0140792Z ─ preparing ‘oro.nifti’: 2021-10-01T23:18:50.0264254Z checking DESCRIPTION meta-information ... 2021-10-01T23:18:50.0305849Z 2021-10-01T23:18:50.0307501Z ✔ checking DESCRIPTION meta-information 2021-10-01T23:18:50.1974473Z 2021-10-01T23:18:50.2021960Z 2021-10-01T23:18:50.2024026Z ─ checking for LF line-endings in source and make files and shell scripts 2021-10-01T23:18:50.2034744Z 2021-10-01T23:18:50.2078364Z 2021-10-01T23:18:50.2079955Z ─ checking for empty or unneeded directories 2021-10-01T23:18:50.2081718Z Removed empty directory ‘oro.nifti/vignettes’ 2021-10-01T23:18:50.2092616Z 2021-10-01T23:18:50.2128038Z 2021-10-01T23:18:50.2129475Z ─ building ‘oro.nifti_0.10.3.tar.gz’ 2021-10-01T23:18:50.7608784Z 2021-10-01T23:18:50.7611910Z 2021-10-01T23:18:50.7613409Z 2021-10-01T23:18:50.7813131Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:18:50.7814673Z (as ‘lib’ is unspecified) 2021-10-01T23:18:51.3001063Z * installing *source* package ‘oro.nifti’ ... 2021-10-01T23:18:51.3243490Z ** R 2021-10-01T23:18:51.3833616Z ** demo 2021-10-01T23:18:51.3841124Z ** inst 2021-10-01T23:18:51.3923430Z ** byte-compile and prepare package for lazy loading 2021-10-01T23:18:52.3591808Z Creating a new generic function for ‘origin’ in package ‘oro.nifti’ 2021-10-01T23:18:57.6115222Z ** help 2021-10-01T23:18:57.9803835Z *** installing help indices 2021-10-01T23:18:58.2402907Z ** building package indices 2021-10-01T23:18:58.5236617Z ** testing if installed package can be loaded 2021-10-01T23:18:59.1026495Z * DONE (oro.nifti) 2021-10-01T23:18:59.2076816Z Skipping install of 'papayar' from a github remote, the SHA1 (221ca9e3) has not changed since last install. 2021-10-01T23:18:59.2077906Z Use `force = TRUE` to force installation 2021-10-01T23:18:59.2078643Z Warning messages: 2021-10-01T23:18:59.2081583Z 1: In i.p(...) : installation of package ‘nloptr’ had non-zero exit status 2021-10-01T23:18:59.2084366Z 2: In i.p(...) : installation of package ‘lme4’ had non-zero exit status 2021-10-01T23:18:59.2086397Z 3: In i.p(...) : 2021-10-01T23:18:59.2087418Z installation of package ‘pbkrtest’ had non-zero exit status 2021-10-01T23:18:59.2090772Z 4: In i.p(...) : installation of package ‘car’ had non-zero exit status 2021-10-01T23:18:59.2091765Z 5: In i.p(...) : 2021-10-01T23:18:59.2093013Z installation of package ‘rstatix’ had non-zero exit status 2021-10-01T23:18:59.2094326Z 6: In i.p(...) : installation of package ‘ggpubr’ had non-zero exit status 2021-10-01T23:19:15.8355586Z Skipping install of 'rcmdcheck' from a cran remote, the SHA1 (1.4.0) has not changed since last install. 2021-10-01T23:19:15.8357406Z Use `force = TRUE` to force installation 2021-10-01T23:19:15.8365739Z Installing 1 packages: markdown 2021-10-01T23:19:15.8374066Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-10-01T23:19:15.8375588Z (as ‘lib’ is unspecified) 2021-10-01T23:19:32.1226190Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/markdown_1.1.tar.gz' 2021-10-01T23:19:33.6932647Z Content type 'binary/octet-stream' length 230102 bytes (224 KB) 2021-10-01T23:19:33.7160020Z ================================================== 2021-10-01T23:19:33.7160730Z downloaded 224 KB 2021-10-01T23:19:33.7161043Z 2021-10-01T23:19:33.9696984Z * installing *binary* package ‘markdown’ ... 2021-10-01T23:19:33.9770933Z * DONE (markdown) 2021-10-01T23:19:33.9853195Z 2021-10-01T23:19:33.9854609Z The downloaded source packages are in 2021-10-01T23:19:33.9856113Z ‘/tmp/RtmphXQJ1r/downloaded_packages’ 2021-10-01T23:19:34.0235257Z 2021-10-01T23:19:34.0295742Z ##[group]Run options(width = 100) 2021-10-01T23:19:34.0296777Z options(width = 100) 2021-10-01T23:19:34.0299870Z pkgs <- installed.packages()[, "Package"] 2021-10-01T23:19:34.0301266Z sessioninfo::session_info(pkgs, include_base = TRUE) 2021-10-01T23:19:34.0316668Z shell: /usr/local/bin/Rscript {0} 2021-10-01T23:19:34.0317473Z env: 2021-10-01T23:19:34.0318355Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:19:34.0319302Z TIC_DEPLOY_KEY: 2021-10-01T23:19:34.0320959Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:19:34.0324044Z GITHUB_PAT: *** 2021-10-01T23:19:34.0325828Z COVERALLS_TOKEN: *** 2021-10-01T23:19:34.0326804Z continue-on-error: false 2021-10-01T23:19:34.0327747Z VDIFFR_RUN_TESTS: 2021-10-01T23:19:34.0328713Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:19:34.0329584Z TZ: UTC 2021-10-01T23:19:34.0330424Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:19:34.0331301Z NOT_CRAN: true 2021-10-01T23:19:34.0332051Z ##[endgroup] 2021-10-01T23:19:34.6312342Z ─ Session info ─────────────────────────────────────────────────────────────────────────────────── 2021-10-01T23:19:34.6313066Z setting value 2021-10-01T23:19:34.6313856Z version R version 3.5.3 (2019-03-11) 2021-10-01T23:19:34.6314436Z os Ubuntu 20.04.3 LTS 2021-10-01T23:19:34.6315171Z system x86_64, linux-gnu 2021-10-01T23:19:34.6315707Z ui X11 2021-10-01T23:19:34.6316673Z language (EN) 2021-10-01T23:19:34.6317488Z collate C.UTF-8 2021-10-01T23:19:34.6318199Z ctype C.UTF-8 2021-10-01T23:19:34.6318730Z tz UTC 2021-10-01T23:19:34.6319374Z date 2021-10-01 2021-10-01T23:19:34.6319681Z 2021-10-01T23:19:34.6320656Z ─ Packages ─────────────────────────────────────────────────────────────────────────────────────── 2021-10-01T23:19:34.6321518Z package * version date lib source 2021-10-01T23:19:34.6322523Z abind 1.4-5 2016-07-21 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6323566Z aghast 0.2.1 2021-10-01 [1] Github (muschellij2/aghast@0c3b853) 2021-10-01T23:19:34.6324610Z askpass 1.1 2019-01-13 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6325551Z backports 1.2.1 2020-12-09 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6326507Z base * 3.5.3 2021-02-17 [2] local 2021-10-01T23:19:34.6327460Z base64enc 0.1-3 2015-07-28 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6328376Z bit 4.0.4 2020-08-04 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6329293Z bit64 4.0.5 2020-08-30 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6330212Z bitops 1.0-7 2021-04-24 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6331117Z boot 1.3-20 2017-08-06 [2] CRAN (R 3.5.3) 2021-10-01T23:19:34.6332025Z brew 1.0-6 2011-04-13 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6332941Z brio 1.1.2 2021-04-23 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6333846Z broom 0.7.9 2021-07-27 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6334777Z cachem 1.0.6 2021-08-19 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6335699Z callr 3.7.0 2021-04-20 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6336668Z carData 3.0-4 2020-05-22 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6338278Z cellranger 1.1.0 2016-07-27 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6339559Z class 7.3-15 2019-01-01 [2] CRAN (R 3.5.3) 2021-10-01T23:19:34.6340485Z cli 3.0.1 2021-07-17 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6341383Z clipr 0.7.1 2020-10-08 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6342319Z cluster 2.0.7-1 2018-04-13 [2] CRAN (R 3.5.3) 2021-10-01T23:19:34.6343277Z codetools 0.2-16 2018-12-24 [2] CRAN (R 3.5.3) 2021-10-01T23:19:34.6344248Z colorspace 2.0-2 2021-06-24 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6345229Z commonmark 1.7 2018-12-01 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6346190Z compiler 3.5.3 2021-02-17 [2] local 2021-10-01T23:19:34.6347125Z conquer 1.0.2 2020-08-27 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6348073Z corrplot 0.90 2021-06-30 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6349000Z covr 3.5.1 2020-09-16 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6349910Z cowplot 1.1.1 2020-12-30 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6350842Z cpp11 0.4.0 2021-09-22 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6351769Z crayon 1.4.1 2021-02-08 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6352864Z credentials 1.3.1 2021-07-25 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6353837Z crosstalk 1.1.1 2021-01-12 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6354764Z curl 4.3.2 2021-06-23 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6355695Z data.table 1.14.2 2021-09-27 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6356649Z datasets * 3.5.3 2021-02-17 [2] local 2021-10-01T23:19:34.6357601Z debugme 1.1.0 2017-10-22 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6358619Z desc 1.2.0.9000 2021-10-01 [1] Github (muschellij2/desc@7be86f2) 2021-10-01T23:19:34.6359622Z devtools 2.4.2 2021-06-07 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6360611Z diffobj 0.3.4 2021-03-22 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6361547Z digest 0.6.28 2021-09-23 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6362486Z dotCall64 1.0-1 2021-02-11 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6363436Z dplyr 1.0.7 2021-06-18 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6364378Z ellipsis 0.3.2 2021-04-29 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6365326Z evaluate 0.14 2019-05-28 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6366264Z fansi 0.5.0 2021-05-25 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6367189Z farver 2.1.0 2021-02-28 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6368106Z fastmap 1.1.0 2021-01-25 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6369042Z fields 12.5 2021-06-25 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6369978Z forcats 0.5.1 2021-01-27 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6370904Z foreign 0.8-71 2018-07-20 [2] CRAN (R 3.5.3) 2021-10-01T23:19:34.6371815Z fs 1.5.0 2020-07-31 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6372853Z generics 0.1.0 2020-10-31 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6373787Z gert 1.4.1 2021-09-16 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6374716Z ggplot2 3.3.5 2021-06-25 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6375662Z ggrepel 0.9.1 2021-01-15 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6376577Z ggsci 2.9 2018-05-14 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6377512Z ggsignif 0.6.3 2021-09-09 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6378617Z gh 1.3.0 2021-04-30 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6379641Z ghtravis 0.15.1 2021-10-01 [1] Github (muschellij2/ghtravis@0b26809) 2021-10-01T23:19:34.6380795Z gifti 0.7.6 2021-10-01 [1] Github 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2021-09-09 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6396180Z httr 1.4.2 2020-07-20 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6397087Z ini 0.3.1 2018-05-20 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6398002Z isoband 0.2.5 2021-07-13 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6398927Z jquerylib 0.1.4 2021-04-26 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6399884Z jsonlite 1.7.2 2020-12-09 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6400856Z KernSmooth 2.23-15 2015-06-29 [2] CRAN (R 3.5.3) 2021-10-01T23:19:34.6401791Z knitr 1.36 2021-09-29 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6402723Z labeling 0.4.2 2020-10-20 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6403659Z later 1.3.0 2021-08-18 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6404591Z lattice 0.20-38 2018-11-04 [2] CRAN (R 3.5.3) 2021-10-01T23:19:34.6405523Z lazyeval 0.2.2 2019-03-15 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6406482Z lifecycle 1.0.1 2021-09-24 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6407438Z magrittr 2.0.1 2020-11-17 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6408455Z maps 3.4.0 2021-09-25 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6409405Z maptools 1.1-2 2021-09-07 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6410354Z markdown 1.1 2019-08-07 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6411264Z MASS 7.3-51.1 2018-11-01 [2] CRAN (R 3.5.3) 2021-10-01T23:19:34.6412181Z Matrix 1.2-15 2018-11-01 [2] CRAN (R 3.5.3) 2021-10-01T23:19:34.6413157Z MatrixModels 0.5-0 2021-03-02 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6414142Z matrixStats 0.61.0 2021-09-17 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6415105Z memoise 2.0.0 2021-01-26 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6416038Z methods * 3.5.3 2021-02-17 [2] local 2021-10-01T23:19:34.6416952Z mgcv 1.8-27 2019-02-06 [2] CRAN (R 3.5.3) 2021-10-01T23:19:34.6418090Z mime 0.12 2021-09-28 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6419032Z minqa 1.2.4 2014-10-09 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6419941Z munsell 0.5.0 2018-06-12 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6420932Z neurobase 1.32.1 2021-04-07 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6421878Z nlme 3.1-137 2018-04-07 [2] CRAN (R 3.5.3) 2021-10-01T23:19:34.6422930Z nnet 7.3-12 2016-02-02 [2] CRAN (R 3.5.3) 2021-10-01T23:19:34.6423867Z numDeriv 2016.8-1.1 2019-06-06 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6424826Z openssl 1.4.5 2021-09-02 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6425764Z openxlsx 4.2.4 2021-06-16 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6426850Z oro.nifti 0.10.3 2021-10-01 [1] Github (neuroconductor/oro.nifti@bd06b05) 2021-10-01T23:19:34.6428049Z papayar 1.0 2021-10-01 [1] Github (neuroconductor/papayar@221ca9e) 2021-10-01T23:19:34.6432988Z parallel 3.5.3 2021-02-17 [2] local 2021-10-01T23:19:34.6433937Z pillar 1.6.3 2021-09-26 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6434888Z pkgbuild 1.2.0 2020-12-15 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6435862Z pkgconfig 2.0.3 2019-09-22 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6436807Z pkgload 1.2.2 2021-09-11 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6437761Z polynom 1.4-0 2019-03-22 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6438702Z praise 1.0.0 2015-08-11 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6439652Z prettyunits 1.1.1 2020-01-24 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6440633Z processx 3.5.2 2021-04-30 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6441605Z progress 1.2.2 2019-05-16 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6442545Z promises 1.2.0.1 2021-02-11 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6443474Z ps 1.6.0 2021-02-28 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6444381Z purrr 0.3.4 2020-04-17 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6445304Z quantreg 5.86 2021-06-06 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6446280Z R.methodsS3 1.8.1 2020-08-26 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6447368Z R.oo 1.24.0 2020-08-26 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6448298Z R.utils 2.11.0 2021-09-26 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6449207Z R6 2.5.1 2021-08-19 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6450131Z rappdirs 0.3.3 2021-01-31 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6451087Z rcmdcheck 1.4.0 2021-09-27 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6452088Z RColorBrewer 1.1-2 2014-12-07 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6453068Z Rcpp 1.0.7 2021-07-07 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6454045Z RcppArmadillo 0.10.7.0.0 2021-09-30 [1] CRAN (R 3.5.3) 2021-10-01T23:19:34.6455031Z RcppEigen 0.3.3.9.1 2020-12-17 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6455986Z readr 2.0.2 2021-09-27 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6456919Z readxl 1.3.1 2019-03-13 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6457982Z rematch 1.0.1 2016-04-21 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6458950Z rematch2 2.1.2 2020-05-01 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6459908Z remotes 2.4.1 2021-09-29 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6460953Z rex 1.2.0 2020-04-21 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6461857Z rgl 0.107.14 2021-08-21 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6462769Z rio 0.5.27 2021-06-21 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6463664Z rlang 0.4.11 2021-04-30 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6464610Z rmarkdown 2.11 2021-09-14 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6465662Z RNifti 1.3.1 2021-10-01 [1] Github (neuroconductor/RNifti@929106d) 2021-10-01T23:19:34.6466689Z roxygen2 7.1.2 2021-09-08 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6467632Z rpart 4.1-13 2018-02-23 [2] CRAN (R 3.5.3) 2021-10-01T23:19:34.6468576Z rprojroot 2.0.2 2020-11-15 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6469533Z rstudioapi 0.13 2020-11-12 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6470495Z rticles 0.21 2021-09-11 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6471452Z rversions 2.1.1 2021-05-31 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6472389Z scales 1.1.1 2020-05-11 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6473317Z servr 0.23 2021-08-11 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6474270Z sessioninfo 1.1.1 2018-11-05 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6475195Z sp 1.4-5 2021-01-10 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6476104Z spam 2.7-0 2021-06-25 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6477040Z SparseM 1.81 2021-02-18 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6477997Z spatial 7.3-11 2015-08-30 [2] CRAN (R 3.5.3) 2021-10-01T23:19:34.6478918Z splines 3.5.3 2021-02-17 [2] local 2021-10-01T23:19:34.6479843Z stats * 3.5.3 2021-02-17 [2] local 2021-10-01T23:19:34.6480752Z stats4 3.5.3 2021-02-17 [2] local 2021-10-01T23:19:34.6481764Z stringi 1.7.4 2021-08-25 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6482715Z stringr 1.4.0 2019-02-10 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6483656Z survival 2.43-3 2018-11-26 [2] CRAN (R 3.5.3) 2021-10-01T23:19:34.6484567Z sys 3.4 2020-07-23 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6485550Z sysreqs 1.0.0.9000 2021-10-01 [1] Github (r-hub/sysreqs@f068afa) 2021-10-01T23:19:34.6486539Z tcltk 3.5.3 2021-02-17 [2] local 2021-10-01T23:19:34.6487475Z testthat 3.0.4 2021-07-01 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6488414Z tibble 3.1.5 2021-09-30 [1] CRAN (R 3.5.3) 2021-10-01T23:19:34.6489397Z tic 0.11.1 2021-10-01 [1] Github (ropensci/tic@ee53e95) 2021-10-01T23:19:34.6490368Z tidyr 1.1.4 2021-09-27 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6491320Z tidyselect 1.1.1 2021-04-30 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6492284Z tinytex 0.34 2021-09-28 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6493190Z tools 3.5.3 2021-02-17 [2] local 2021-10-01T23:19:34.6494099Z tzdb 0.1.2 2021-07-20 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6495122Z usethis 2.0.1 2021-02-10 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6496029Z utf8 1.2.2 2021-07-24 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6496934Z utils * 3.5.3 2021-02-17 [2] local 2021-10-01T23:19:34.6498063Z vctrs 0.3.8 2021-04-29 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6499006Z viridis 0.6.1 2021-05-11 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6499977Z viridisLite 0.4.0 2021-04-13 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6500935Z vroom 1.5.5 2021-09-14 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6501851Z waldo 0.3.1 2021-09-14 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6502764Z whisker 0.4 2019-08-28 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6503697Z withr 2.4.2 2021-04-18 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6504605Z xfun 0.26 2021-09-14 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6505494Z xml2 1.3.2 2020-04-23 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6506408Z xopen 1.0.0 2018-09-17 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6507322Z yaml 2.2.1 2020-02-01 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6508210Z zip 2.2.0 2021-05-31 [1] RSPM (R 3.5.3) 2021-10-01T23:19:34.6508566Z 2021-10-01T23:19:34.6509098Z [1] /home/runner/work/_temp/Library 2021-10-01T23:19:34.6509675Z [2] /opt/R/3.5.3/lib/R/library 2021-10-01T23:19:34.6544637Z ##[group]Run Rscript -e 'tic::script()' 2021-10-01T23:19:34.6545294Z Rscript -e 'tic::script()' 2021-10-01T23:19:34.6545769Z ls -l check 2021-10-01T23:19:34.6596114Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-10-01T23:19:34.6596681Z env: 2021-10-01T23:19:34.6597184Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:19:34.6597718Z TIC_DEPLOY_KEY: 2021-10-01T23:19:34.6598599Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:19:34.6600546Z GITHUB_PAT: *** 2021-10-01T23:19:34.6601536Z COVERALLS_TOKEN: *** 2021-10-01T23:19:34.6602082Z continue-on-error: false 2021-10-01T23:19:34.6602619Z VDIFFR_RUN_TESTS: 2021-10-01T23:19:34.6603168Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:19:34.6603655Z TZ: UTC 2021-10-01T23:19:34.6604093Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:19:34.6604559Z NOT_CRAN: true 2021-10-01T23:19:34.6604971Z ##[endgroup] 2021-10-01T23:19:34.9500126Z ✔ Loading tic stage configuration from tic.R 2021-10-01T23:19:35.1159272Z Running script: step_rcmdcheck(warnings_are_errors = NULL, notes_are_errors = NULL, 2021-10-01T23:19:35.1160386Z args = args, build_args = NULL, error_on = error_on, repos = repo_default(), 2021-10-01T23:19:35.1161204Z timeout = Inf, check_dir = "check") 2021-10-01T23:19:35.3296810Z ── R CMD build ───────────────────────────────────────────────────────────────── 2021-10-01T23:19:35.6811999Z * checking for file ‘.../DESCRIPTION’ ... OK 2021-10-01T23:19:35.7669842Z * preparing ‘ciftiTools’: 2021-10-01T23:19:35.7819958Z * checking DESCRIPTION meta-information ... OK 2021-10-01T23:19:35.9544548Z * checking for LF line-endings in source and make files and shell scripts 2021-10-01T23:19:35.9561555Z * checking for empty or unneeded directories 2021-10-01T23:19:35.9579753Z * looking to see if a ‘data/datalist’ file should be added 2021-10-01T23:19:35.9681357Z * building ‘ciftiTools_0.6.1.tar.gz’ 2021-10-01T23:19:36.6243420Z 2021-10-01T23:19:36.8551254Z ── R CMD check ───────────────────────────────────────────────────────────────── 2021-10-01T23:19:37.0808997Z * using log directory ‘/home/runner/work/ciftiTools/ciftiTools/check/ciftiTools.Rcheck’ 2021-10-01T23:19:37.0810814Z * using R version 3.5.3 (2019-03-11) 2021-10-01T23:19:37.0812320Z * using platform: x86_64-pc-linux-gnu (64-bit) 2021-10-01T23:19:37.0813337Z * using session charset: UTF-8 2021-10-01T23:19:37.4088884Z * using option ‘--as-cran’ 2021-10-01T23:19:37.4114333Z * checking for file ‘ciftiTools/DESCRIPTION’ ... OK 2021-10-01T23:19:37.4115439Z * checking extension type ... Package 2021-10-01T23:19:37.4116612Z * this is package ‘ciftiTools’ version ‘0.6.1’ 2021-10-01T23:19:37.4117569Z * package encoding: UTF-8 2021-10-01T23:19:37.4158720Z * checking package namespace information ... OK 2021-10-01T23:19:53.3170540Z * checking package dependencies ... NOTE 2021-10-01T23:19:53.3172697Z Package suggested but not available for checking: ‘ggpubr’ 2021-10-01T23:19:53.3194599Z * checking if this is a source package ... OK 2021-10-01T23:19:53.3195724Z * checking if there is a namespace ... OK 2021-10-01T23:19:54.3479599Z * checking for executable files ... OK 2021-10-01T23:19:54.3480996Z * checking for hidden files and directories ... OK 2021-10-01T23:19:54.3525865Z * checking for portable file names ... OK 2021-10-01T23:19:54.3537421Z * checking for sufficient/correct file permissions ... OK 2021-10-01T23:20:03.3083842Z * checking whether package ‘ciftiTools’ can be installed ... OK 2021-10-01T23:20:03.3134622Z * checking installed package size ... NOTE 2021-10-01T23:20:03.3135579Z installed size is 6.4Mb 2021-10-01T23:20:03.3156019Z sub-directories of 1Mb or more: 2021-10-01T23:20:03.3165329Z R 1.6Mb 2021-10-01T23:20:03.3165998Z extdata 4.3Mb 2021-10-01T23:20:03.4336452Z * checking package directory ... OK 2021-10-01T23:20:03.6174745Z * checking DESCRIPTION meta-information ... OK 2021-10-01T23:20:03.6176240Z * checking top-level files ... OK 2021-10-01T23:20:03.6177635Z * checking for left-over files ... OK 2021-10-01T23:20:03.6180941Z * checking index information ... OK 2021-10-01T23:20:03.7450789Z * checking package subdirectories ... OK 2021-10-01T23:20:03.8090178Z * checking R files for non-ASCII characters ... OK 2021-10-01T23:20:03.9174002Z * checking R files for syntax errors ... OK 2021-10-01T23:20:04.6338461Z * checking whether the package can be loaded ... OK 2021-10-01T23:20:05.3183248Z * checking whether the package can be loaded with stated dependencies ... OK 2021-10-01T23:20:06.0065907Z * checking whether the package can be unloaded cleanly ... OK 2021-10-01T23:20:06.6780497Z * checking whether the namespace can be loaded with stated dependencies ... OK 2021-10-01T23:20:07.3922067Z * checking whether the namespace can be unloaded cleanly ... OK 2021-10-01T23:20:08.1532461Z * checking loading without being on the library search path ... OK 2021-10-01T23:20:10.1512715Z * checking dependencies in R code ... OK 2021-10-01T23:20:11.3460371Z * checking S3 generic/method consistency ... OK 2021-10-01T23:20:12.0179719Z * checking replacement functions ... OK 2021-10-01T23:20:13.2864593Z * checking foreign function calls ... OK 2021-10-01T23:20:26.7924502Z * checking R code for possible problems ... OK 2021-10-01T23:20:27.2729927Z * checking Rd files ... OK 2021-10-01T23:20:27.3270298Z * checking Rd metadata ... OK 2021-10-01T23:20:27.6332421Z * checking Rd line widths ... OK 2021-10-01T23:20:27.8873108Z * checking Rd cross-references ... OK 2021-10-01T23:20:28.5817612Z * checking for missing documentation entries ... OK 2021-10-01T23:20:31.2019828Z * checking for code/documentation mismatches ... OK 2021-10-01T23:20:33.0037317Z * checking Rd \usage sections ... OK 2021-10-01T23:20:33.2935312Z * checking Rd contents ... OK 2021-10-01T23:20:33.4558232Z * checking for unstated dependencies in examples ... OK 2021-10-01T23:20:33.6455827Z * checking R/sysdata.rda ... OK 2021-10-01T23:20:33.9459685Z * checking examples ... NONE 2021-10-01T23:20:34.0060378Z * checking for unstated dependencies in ‘tests’ ... OK 2021-10-01T23:20:34.1848290Z * checking tests ... 2021-10-01T23:20:35.3449061Z Running ‘testthat.R’ 2021-10-01T23:20:35.3511444Z OK 2021-10-01T23:20:40.4932070Z * checking PDF version of manual ... OK 2021-10-01T23:20:40.4933295Z * DONE 2021-10-01T23:20:40.4933956Z 2021-10-01T23:20:40.4934600Z Status: 2 NOTEs 2021-10-01T23:20:40.4935059Z See 2021-10-01T23:20:40.4936581Z ‘/home/runner/work/ciftiTools/ciftiTools/check/ciftiTools.Rcheck/00check.log’ 2021-10-01T23:20:40.4937374Z for details. 2021-10-01T23:20:40.7298549Z ── R CMD check results ─────────────────────────────────── ciftiTools 0.6.1 ──── 2021-10-01T23:20:40.7320235Z Duration: 1m 4.1s 2021-10-01T23:20:40.7320630Z 2021-10-01T23:20:40.7333074Z ❯ checking package dependencies ... NOTE 2021-10-01T23:20:40.7334242Z Package suggested but not available for checking: ‘ggpubr’ 2021-10-01T23:20:40.7334731Z 2021-10-01T23:20:40.7341901Z ❯ checking installed package size ... NOTE 2021-10-01T23:20:40.7342656Z installed size is 6.4Mb 2021-10-01T23:20:40.7344836Z sub-directories of 1Mb or more: 2021-10-01T23:20:40.7345425Z R 1.6Mb 2021-10-01T23:20:40.7345888Z extdata 4.3Mb 2021-10-01T23:20:40.7346207Z 2021-10-01T23:20:40.7364917Z 0 errors ✔ | 0 warnings ✔ | 2 notes ✖ 2021-10-01T23:20:40.7505347Z total 9216 2021-10-01T23:20:40.7507135Z drwxr-xr-x 6 runner docker 4096 Oct 1 23:20 ciftiTools.Rcheck 2021-10-01T23:20:40.7508580Z -rw-r--r-- 1 runner docker 4428918 Oct 1 23:19 ciftiTools_0.6.1.tar.gz 2021-10-01T23:20:40.7510849Z -rw-r--r-- 1 runner docker 4998569 Oct 1 23:20 ciftiTools_0.6.1_R_x86_64-pc-linux-gnu.tar.gz 2021-10-01T23:20:40.7549792Z ##[group]Run find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-10-01T23:20:40.7550660Z find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-10-01T23:20:40.7600617Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-10-01T23:20:40.7601202Z env: 2021-10-01T23:20:40.7601709Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:20:40.7602231Z TIC_DEPLOY_KEY: 2021-10-01T23:20:40.7603137Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:20:40.7605053Z GITHUB_PAT: *** 2021-10-01T23:20:40.7605953Z COVERALLS_TOKEN: *** 2021-10-01T23:20:40.7606501Z continue-on-error: false 2021-10-01T23:20:40.7607046Z VDIFFR_RUN_TESTS: 2021-10-01T23:20:40.7607579Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:20:40.7608085Z TZ: UTC 2021-10-01T23:20:40.7608529Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:20:40.7608985Z NOT_CRAN: true 2021-10-01T23:20:40.7609415Z ##[endgroup] 2021-10-01T23:20:40.7726340Z 2021-10-01T23:20:40.7728004Z R version 3.5.3 (2019-03-11) -- "Great Truth" 2021-10-01T23:20:40.7728885Z Copyright (C) 2019 The R Foundation for Statistical Computing 2021-10-01T23:20:40.7729932Z Platform: x86_64-pc-linux-gnu (64-bit) 2021-10-01T23:20:40.7730338Z 2021-10-01T23:20:40.7731004Z R is free software and comes with ABSOLUTELY NO WARRANTY. 2021-10-01T23:20:40.7731939Z You are welcome to redistribute it under certain conditions. 2021-10-01T23:20:40.7733543Z Type 'license()' or 'licence()' for distribution details. 2021-10-01T23:20:40.7734280Z 2021-10-01T23:20:40.7734937Z R is a collaborative project with many contributors. 2021-10-01T23:20:40.7735950Z Type 'contributors()' for more information and 2021-10-01T23:20:40.7737394Z 'citation()' on how to cite R or R packages in publications. 2021-10-01T23:20:40.7738060Z 2021-10-01T23:20:40.7738901Z Type 'demo()' for some demos, 'help()' for on-line help, or 2021-10-01T23:20:40.7739921Z 'help.start()' for an HTML browser interface to help. 2021-10-01T23:20:40.7740682Z Type 'q()' to quit R. 2021-10-01T23:20:40.7740985Z 2021-10-01T23:20:40.7741440Z > library(testthat) 2021-10-01T23:20:40.7741966Z > library(ciftiTools) 2021-10-01T23:20:40.7742406Z > 2021-10-01T23:20:40.7742892Z > test_check("ciftiTools") 2021-10-01T23:20:40.7744277Z ══ Skipped tests ═══════════════════════════════════════════════════════════════ 2021-10-01T23:20:40.7745224Z • Connectome Workbench is not available. (6) 2021-10-01T23:20:40.7745658Z 2021-10-01T23:20:40.7746160Z [ FAIL 0 | WARN 0 | SKIP 6 | PASS 0 ] 2021-10-01T23:20:40.7746655Z > 2021-10-01T23:20:40.7747352Z > proc.time() 2021-10-01T23:20:40.7747905Z user system elapsed 2021-10-01T23:20:40.7748387Z 1.053 0.082 1.121 2021-10-01T23:20:40.7787893Z ##[group]Run Rscript -e "tic::before_deploy()" 2021-10-01T23:20:40.7788565Z Rscript -e "tic::before_deploy()" 2021-10-01T23:20:40.7840866Z shell: /usr/bin/bash -e {0} 2021-10-01T23:20:40.7841316Z env: 2021-10-01T23:20:40.7841818Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:20:40.7842339Z TIC_DEPLOY_KEY: 2021-10-01T23:20:40.7843238Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:20:40.7845057Z GITHUB_PAT: *** 2021-10-01T23:20:40.7845936Z COVERALLS_TOKEN: *** 2021-10-01T23:20:40.7846491Z continue-on-error: false 2021-10-01T23:20:40.7847025Z VDIFFR_RUN_TESTS: 2021-10-01T23:20:40.7847556Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:20:40.7848055Z TZ: UTC 2021-10-01T23:20:40.7848493Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:20:40.7848953Z NOT_CRAN: true 2021-10-01T23:20:40.7849376Z ##[endgroup] 2021-10-01T23:20:41.0807786Z ✔ Loading tic stage configuration from tic.R 2021-10-01T23:20:41.2121830Z ##[group]Run actions/upload-release-asset@v1.0.1 2021-10-01T23:20:41.2122446Z with: 2021-10-01T23:20:41.2123402Z upload_url: https://uploads.github.com/repos/neuroconductor/ciftiTools/releases/50665546/assets{?name,label} 2021-10-01T23:20:41.2124592Z asset_path: check/ciftiTools_0.6.1_R_x86_64-pc-linux-gnu.tar.gz 2021-10-01T23:20:41.2125401Z asset_name: ciftiTools_0.6.1_R_x86_64-pc-linux-gnu_R3.5.tar.gz 2021-10-01T23:20:41.2126167Z asset_content_type: application/octet-stream 2021-10-01T23:20:41.2126728Z env: 2021-10-01T23:20:41.2127207Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:20:41.2127734Z TIC_DEPLOY_KEY: 2021-10-01T23:20:41.2128607Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:20:41.2130339Z GITHUB_PAT: *** 2021-10-01T23:20:41.2131335Z COVERALLS_TOKEN: *** 2021-10-01T23:20:41.2131909Z continue-on-error: false 2021-10-01T23:20:41.2132430Z VDIFFR_RUN_TESTS: 2021-10-01T23:20:41.2133010Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:20:41.2133517Z TZ: UTC 2021-10-01T23:20:41.2133958Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:20:41.2134412Z NOT_CRAN: true 2021-10-01T23:20:41.2135485Z GITHUB_TOKEN: *** 2021-10-01T23:20:41.2135926Z ##[endgroup] 2021-10-01T23:20:41.8693205Z ##[group]Run Rscript -e "tic::deploy()" 2021-10-01T23:20:41.8693840Z Rscript -e "tic::deploy()" 2021-10-01T23:20:41.8744093Z shell: /usr/bin/bash -e {0} 2021-10-01T23:20:41.8744543Z env: 2021-10-01T23:20:41.8745036Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:20:41.8745571Z TIC_DEPLOY_KEY: 2021-10-01T23:20:41.8746478Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:20:41.8748365Z GITHUB_PAT: *** 2021-10-01T23:20:41.8749270Z COVERALLS_TOKEN: *** 2021-10-01T23:20:41.8749833Z continue-on-error: false 2021-10-01T23:20:41.8750526Z VDIFFR_RUN_TESTS: 2021-10-01T23:20:41.8751073Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:20:41.8751580Z TZ: UTC 2021-10-01T23:20:41.8752007Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:20:41.8752475Z NOT_CRAN: true 2021-10-01T23:20:41.8752905Z ##[endgroup] 2021-10-01T23:20:42.1733066Z ✔ Loading tic stage configuration from tic.R 2021-10-01T23:20:42.3074652Z ##[group]Run Rscript -e "tic::after_deploy()" 2021-10-01T23:20:42.3075310Z Rscript -e "tic::after_deploy()" 2021-10-01T23:20:42.3126059Z shell: /usr/bin/bash -e {0} 2021-10-01T23:20:42.3126497Z env: 2021-10-01T23:20:42.3127010Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-10-01T23:20:42.3127539Z TIC_DEPLOY_KEY: 2021-10-01T23:20:42.3128443Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-10-01T23:20:42.3130175Z GITHUB_PAT: *** 2021-10-01T23:20:42.3131380Z COVERALLS_TOKEN: *** 2021-10-01T23:20:42.3131931Z continue-on-error: false 2021-10-01T23:20:42.3132475Z VDIFFR_RUN_TESTS: 2021-10-01T23:20:42.3133044Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-10-01T23:20:42.3133538Z TZ: UTC 2021-10-01T23:20:42.3133982Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-10-01T23:20:42.3134437Z NOT_CRAN: true 2021-10-01T23:20:42.3134867Z ##[endgroup] 2021-10-01T23:20:42.6030462Z ✔ Loading tic stage configuration from tic.R 2021-10-01T23:20:43.6251450Z Post job cleanup. 2021-10-01T23:20:43.6761748Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-10-01T23:20:43.6870126Z Post job cleanup. 2021-10-01T23:20:43.8033797Z [command]/usr/bin/git version 2021-10-01T23:20:43.8099095Z git version 2.33.0 2021-10-01T23:20:43.8148027Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-10-01T23:20:43.8193997Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-10-01T23:20:43.8474653Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-10-01T23:20:43.8505427Z http.https://github.com/.extraheader 2021-10-01T23:20:43.8518021Z [command]/usr/bin/git config --local --unset-all http.https://github.com/.extraheader 2021-10-01T23:20:43.8565141Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-10-01T23:20:43.8987457Z Cleaning up orphan processes