2021-06-03T19:00:40.3854016Z ##[section]Starting: Request a runner to run this job 2021-06-03T19:00:40.9975295Z Can't find any online and idle self-hosted runner in current repository that matches the required labels: 'ubuntu-20.04' 2021-06-03T19:00:41.1130976Z Can't find any online and idle self-hosted runner in current repository's organization/enterprise account that matches the required labels: 'ubuntu-20.04' 2021-06-03T19:00:41.2135205Z Found online and idle hosted runner in current repository's enterprise account that matches the required labels: 'ubuntu-20.04' 2021-06-03T19:00:41.4107601Z ##[section]Finishing: Request a runner to run this job 2021-06-03T19:00:49.1517598Z Current runner version: '2.278.0' 2021-06-03T19:00:49.1544159Z ##[group]Operating System 2021-06-03T19:00:49.1545237Z Ubuntu 2021-06-03T19:00:49.1545800Z 20.04.2 2021-06-03T19:00:49.1546395Z LTS 2021-06-03T19:00:49.1546912Z ##[endgroup] 2021-06-03T19:00:49.1547564Z ##[group]Virtual Environment 2021-06-03T19:00:49.1548385Z Environment: ubuntu-20.04 2021-06-03T19:00:49.1548891Z Version: 20210531.0 2021-06-03T19:00:49.1549787Z Included Software: https://github.com/actions/virtual-environments/blob/ubuntu20/20210531.0/images/linux/Ubuntu2004-README.md 2021-06-03T19:00:49.1551050Z Image Release: https://github.com/actions/virtual-environments/releases/tag/ubuntu20%2F20210531.0 2021-06-03T19:00:49.1551800Z ##[endgroup] 2021-06-03T19:00:49.1553547Z ##[group]GITHUB_TOKEN Permissions 2021-06-03T19:00:49.1554739Z Actions: write 2021-06-03T19:00:49.1555277Z Checks: write 2021-06-03T19:00:49.1555876Z Contents: write 2021-06-03T19:00:49.1556361Z Deployments: write 2021-06-03T19:00:49.1556924Z Issues: write 2021-06-03T19:00:49.1557615Z Metadata: read 2021-06-03T19:00:49.1558097Z Packages: write 2021-06-03T19:00:49.1558556Z PullRequests: write 2021-06-03T19:00:49.1559133Z RepositoryProjects: write 2021-06-03T19:00:49.1559879Z SecurityEvents: write 2021-06-03T19:00:49.1560425Z Statuses: write 2021-06-03T19:00:49.1561203Z ##[endgroup] 2021-06-03T19:00:49.1563903Z Prepare workflow directory 2021-06-03T19:00:49.2790511Z Prepare all required actions 2021-06-03T19:00:49.2802392Z Getting action download info 2021-06-03T19:00:49.7927843Z Download action repository 'actions/checkout@v2' 2021-06-03T19:00:51.5075122Z Download action repository 'r-lib/actions@master' 2021-06-03T19:00:52.2522644Z Download action repository 'adigherman/actions@master' 2021-06-03T19:00:54.8205725Z Download action repository 'msys2/setup-msys2@v2' 2021-06-03T19:00:55.1821590Z Download action repository 'actions/cache@v1' 2021-06-03T19:00:55.4743569Z Download action repository 'actions/upload-artifact@master' 2021-06-03T19:00:55.7774792Z Download action repository 'actions/upload-release-asset@v1.0.1' 2021-06-03T19:00:56.2510657Z ##[group]Run actions/checkout@v2 2021-06-03T19:00:56.2511277Z with: 2021-06-03T19:00:56.2511769Z repository: neuroconductor/neuroCombatData 2021-06-03T19:00:56.2512772Z token: *** 2021-06-03T19:00:56.2513387Z ssh-strict: true 2021-06-03T19:00:56.2514208Z persist-credentials: true 2021-06-03T19:00:56.2514675Z clean: true 2021-06-03T19:00:56.2515196Z fetch-depth: 1 2021-06-03T19:00:56.2515559Z lfs: false 2021-06-03T19:00:56.2516096Z submodules: false 2021-06-03T19:00:56.2516786Z env: 2021-06-03T19:00:56.2517368Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:00:56.2518139Z TIC_DEPLOY_KEY: 2021-06-03T19:00:56.2518894Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:00:56.2520598Z GITHUB_PAT: *** 2021-06-03T19:00:56.2521927Z COVERALLS_TOKEN: *** 2021-06-03T19:00:56.2522430Z continue-on-error: false 2021-06-03T19:00:56.2522926Z VDIFFR_RUN_TESTS: 2021-06-03T19:00:56.2523545Z ##[endgroup] 2021-06-03T19:00:56.4788504Z Syncing repository: neuroconductor/neuroCombatData 2021-06-03T19:00:56.4789494Z ##[group]Getting Git version info 2021-06-03T19:00:56.4790688Z Working directory is '/home/runner/work/neuroCombatData/neuroCombatData' 2021-06-03T19:00:56.4872076Z [command]/usr/bin/git version 2021-06-03T19:00:56.5012625Z git version 2.31.1 2021-06-03T19:00:56.5044701Z ##[endgroup] 2021-06-03T19:00:56.5055119Z Deleting the contents of '/home/runner/work/neuroCombatData/neuroCombatData' 2021-06-03T19:00:56.5088104Z ##[group]Initializing the repository 2021-06-03T19:00:56.5089492Z [command]/usr/bin/git init /home/runner/work/neuroCombatData/neuroCombatData 2021-06-03T19:00:56.5170969Z hint: Using 'master' as the name for the initial branch. This default branch name 2021-06-03T19:00:56.5172376Z hint: is subject to change. To configure the initial branch name to use in all 2021-06-03T19:00:56.5173727Z hint: of your new repositories, which will suppress this warning, call: 2021-06-03T19:00:56.5174951Z hint: 2021-06-03T19:00:56.5176356Z hint: git config --global init.defaultBranch 2021-06-03T19:00:56.5177140Z hint: 2021-06-03T19:00:56.5178453Z hint: Names commonly chosen instead of 'master' are 'main', 'trunk' and 2021-06-03T19:00:56.5180018Z hint: 'development'. The just-created branch can be renamed via this command: 2021-06-03T19:00:56.5180820Z hint: 2021-06-03T19:00:56.5181591Z hint: git branch -m 2021-06-03T19:00:56.5186765Z Initialized empty Git repository in /home/runner/work/neuroCombatData/neuroCombatData/.git/ 2021-06-03T19:00:56.5205227Z [command]/usr/bin/git remote add origin https://github.com/neuroconductor/neuroCombatData 2021-06-03T19:00:56.5290340Z ##[endgroup] 2021-06-03T19:00:56.5290932Z ##[group]Disabling automatic garbage collection 2021-06-03T19:00:56.5294181Z [command]/usr/bin/git config --local gc.auto 0 2021-06-03T19:00:56.5340899Z ##[endgroup] 2021-06-03T19:00:56.5346374Z ##[group]Setting up auth 2021-06-03T19:00:56.5355566Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-06-03T19:00:56.5440998Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-06-03T19:00:56.5866841Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-06-03T19:00:56.5919120Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-06-03T19:00:56.6214608Z [command]/usr/bin/git config --local http.https://github.com/.extraheader AUTHORIZATION: basic *** 2021-06-03T19:00:56.6324937Z ##[endgroup] 2021-06-03T19:00:56.6328813Z ##[group]Fetching the repository 2021-06-03T19:00:56.6345536Z [command]/usr/bin/git -c protocol.version=2 fetch --no-tags --prune --progress --no-recurse-submodules --depth=1 origin +a68005cec61d0f6252d7c9da963f8760bd809747:refs/tags/0.99.0.s 2021-06-03T19:00:56.9914561Z remote: Enumerating objects: 27, done. 2021-06-03T19:00:56.9948925Z remote: Counting objects: 3% (1/27) 2021-06-03T19:00:56.9950404Z remote: Counting objects: 7% (2/27) 2021-06-03T19:00:56.9951136Z remote: Counting objects: 11% (3/27) 2021-06-03T19:00:56.9951859Z remote: Counting objects: 14% (4/27) 2021-06-03T19:00:56.9952582Z remote: Counting objects: 18% (5/27) 2021-06-03T19:00:56.9953319Z remote: Counting objects: 22% (6/27) 2021-06-03T19:00:56.9954042Z remote: Counting objects: 25% (7/27) 2021-06-03T19:00:56.9954772Z remote: Counting objects: 29% (8/27) 2021-06-03T19:00:56.9955423Z remote: Counting objects: 33% (9/27) 2021-06-03T19:00:56.9956124Z remote: Counting objects: 37% (10/27) 2021-06-03T19:00:56.9956791Z remote: Counting objects: 40% (11/27) 2021-06-03T19:00:56.9957403Z remote: Counting objects: 44% (12/27) 2021-06-03T19:00:56.9958048Z remote: Counting objects: 48% (13/27) 2021-06-03T19:00:56.9959875Z remote: Counting objects: 51% (14/27) 2021-06-03T19:00:56.9960653Z remote: Counting objects: 55% (15/27) 2021-06-03T19:00:56.9961583Z remote: Counting objects: 59% (16/27) 2021-06-03T19:00:56.9962546Z remote: Counting objects: 62% (17/27) 2021-06-03T19:00:56.9963552Z remote: Counting objects: 66% (18/27) 2021-06-03T19:00:56.9964178Z remote: Counting objects: 70% (19/27) 2021-06-03T19:00:56.9964819Z remote: Counting objects: 74% (20/27) 2021-06-03T19:00:56.9965510Z remote: Counting objects: 77% (21/27) 2021-06-03T19:00:56.9966180Z remote: Counting objects: 81% (22/27) 2021-06-03T19:00:56.9966943Z remote: Counting objects: 85% (23/27) 2021-06-03T19:00:56.9968025Z remote: Counting objects: 88% (24/27) 2021-06-03T19:00:56.9968977Z remote: Counting objects: 92% (25/27) 2021-06-03T19:00:56.9969950Z remote: Counting objects: 96% (26/27) 2021-06-03T19:00:56.9971091Z remote: Counting objects: 100% (27/27) 2021-06-03T19:00:56.9971877Z remote: Counting objects: 100% (27/27), done. 2021-06-03T19:00:56.9972452Z remote: Compressing objects: 4% (1/21) 2021-06-03T19:00:56.9973039Z remote: Compressing objects: 9% (2/21) 2021-06-03T19:00:56.9974198Z remote: Compressing objects: 14% (3/21) 2021-06-03T19:00:56.9975163Z remote: Compressing objects: 19% (4/21) 2021-06-03T19:00:56.9975912Z remote: Compressing objects: 23% (5/21) 2021-06-03T19:00:56.9976477Z remote: Compressing objects: 28% (6/21) 2021-06-03T19:00:56.9977054Z remote: Compressing objects: 33% (7/21) 2021-06-03T19:00:56.9977634Z remote: Compressing objects: 38% (8/21) 2021-06-03T19:00:56.9978604Z remote: Compressing objects: 42% (9/21) 2021-06-03T19:00:56.9979516Z remote: Compressing objects: 47% (10/21) 2021-06-03T19:00:56.9980094Z remote: Compressing objects: 52% (11/21) 2021-06-03T19:00:56.9980930Z remote: Compressing objects: 57% (12/21) 2021-06-03T19:00:56.9981512Z remote: Compressing objects: 61% (13/21) 2021-06-03T19:00:56.9982073Z remote: Compressing objects: 66% (14/21) 2021-06-03T19:00:56.9982652Z remote: Compressing objects: 71% (15/21) 2021-06-03T19:00:56.9983229Z remote: Compressing objects: 76% (16/21) 2021-06-03T19:00:56.9983792Z remote: Compressing objects: 80% (17/21) 2021-06-03T19:00:56.9984367Z remote: Compressing objects: 85% (18/21) 2021-06-03T19:00:56.9984929Z remote: Compressing objects: 90% (19/21) 2021-06-03T19:00:56.9985510Z remote: Compressing objects: 95% (20/21) 2021-06-03T19:00:56.9986088Z remote: Compressing objects: 100% (21/21) 2021-06-03T19:00:56.9986676Z remote: Compressing objects: 100% (21/21), done. 2021-06-03T19:00:57.0271379Z remote: Total 27 (delta 1), reused 25 (delta 1), pack-reused 0 2021-06-03T19:00:57.0676295Z From https://github.com/neuroconductor/neuroCombatData 2021-06-03T19:00:57.0677784Z * [new ref] a68005cec61d0f6252d7c9da963f8760bd809747 -> 0.99.0.s 2021-06-03T19:00:57.0825240Z ##[endgroup] 2021-06-03T19:00:57.0826148Z ##[group]Determining the checkout info 2021-06-03T19:00:57.0831029Z ##[endgroup] 2021-06-03T19:00:57.0832970Z ##[group]Checking out the ref 2021-06-03T19:00:57.0834421Z [command]/usr/bin/git checkout --progress --force refs/tags/0.99.0.s 2021-06-03T19:00:57.0946913Z Note: switching to 'refs/tags/0.99.0.s'. 2021-06-03T19:00:57.0947275Z 2021-06-03T19:00:57.0948582Z You are in 'detached HEAD' state. You can look around, make experimental 2021-06-03T19:00:57.0949352Z changes and commit them, and you can discard any commits you make in this 2021-06-03T19:00:57.0950544Z state without impacting any branches by switching back to a branch. 2021-06-03T19:00:57.0951191Z 2021-06-03T19:00:57.0952170Z If you want to create a new branch to retain commits you create, you may 2021-06-03T19:00:57.0953399Z do so (now or later) by using -c with the switch command. Example: 2021-06-03T19:00:57.0953804Z 2021-06-03T19:00:57.0954370Z git switch -c 2021-06-03T19:00:57.0954709Z 2021-06-03T19:00:57.0955079Z Or undo this operation with: 2021-06-03T19:00:57.0955380Z 2021-06-03T19:00:57.0955841Z git switch - 2021-06-03T19:00:57.0956092Z 2021-06-03T19:00:57.0956840Z Turn off this advice by setting config variable advice.detachedHead to false 2021-06-03T19:00:57.0957364Z 2021-06-03T19:00:57.0957965Z HEAD is now at a68005c Version id 200 stable 2021-06-03T19:00:57.0958814Z ##[endgroup] 2021-06-03T19:00:57.0983471Z [command]/usr/bin/git log -1 --format='%H' 2021-06-03T19:00:57.1017202Z 'a68005cec61d0f6252d7c9da963f8760bd809747' 2021-06-03T19:00:57.1217384Z ##[group]Run r-lib/actions/setup-r@master 2021-06-03T19:00:57.1218050Z with: 2021-06-03T19:00:57.1218414Z r-version: 3.5 2021-06-03T19:00:57.1218770Z Ncpus: 1 2021-06-03T19:00:57.1219188Z crayon.enabled: NULL 2021-06-03T19:00:57.1219893Z remove-openmp-macos: true 2021-06-03T19:00:57.1220450Z http-user-agent: default 2021-06-03T19:00:57.1220926Z install-r: true 2021-06-03T19:00:57.1221688Z windows-path-include-mingw: true 2021-06-03T19:00:57.1224024Z update-rtools: false 2021-06-03T19:00:57.1224478Z env: 2021-06-03T19:00:57.1224939Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:00:57.1225454Z TIC_DEPLOY_KEY: 2021-06-03T19:00:57.1226323Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:00:57.1228835Z GITHUB_PAT: *** 2021-06-03T19:00:57.1229697Z COVERALLS_TOKEN: *** 2021-06-03T19:00:57.1230189Z continue-on-error: false 2021-06-03T19:00:57.1230680Z VDIFFR_RUN_TESTS: 2021-06-03T19:00:57.1231080Z ##[endgroup] 2021-06-03T19:00:58.6932731Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive add-apt-repository -y ppa:cran/travis 2021-06-03T19:01:02.8200134Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-06-03T19:01:02.8204001Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease [114 kB] 2021-06-03T19:01:02.8216478Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease [101 kB] 2021-06-03T19:01:02.9292451Z Get:4 http://security.ubuntu.com/ubuntu focal-security InRelease [114 kB] 2021-06-03T19:01:03.0628936Z Get:5 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease [18.0 kB] 2021-06-03T19:01:03.0980452Z Get:6 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease [10.5 kB] 2021-06-03T19:01:03.3270808Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 Packages [1012 kB] 2021-06-03T19:01:03.3662101Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main Translation-en [227 kB] 2021-06-03T19:01:03.3666847Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 c-n-f Metadata [13.5 kB] 2021-06-03T19:01:03.3674720Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted amd64 Packages [241 kB] 2021-06-03T19:01:03.3703245Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted Translation-en [35.5 kB] 2021-06-03T19:01:03.3716489Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted amd64 c-n-f Metadata [456 B] 2021-06-03T19:01:03.3757171Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 Packages [779 kB] 2021-06-03T19:01:03.3835183Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe Translation-en [168 kB] 2021-06-03T19:01:03.3869218Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 c-n-f Metadata [17.6 kB] 2021-06-03T19:01:03.3880618Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal-updates/multiverse amd64 Packages [23.4 kB] 2021-06-03T19:01:03.3890985Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal-updates/multiverse Translation-en [5888 B] 2021-06-03T19:01:03.3899041Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal-updates/multiverse amd64 c-n-f Metadata [648 B] 2021-06-03T19:01:03.4951141Z Hit:19 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-06-03T19:01:03.7167803Z Get:20 https://packages.microsoft.com/ubuntu/20.04/prod focal/main amd64 Packages [74.7 kB] 2021-06-03T19:01:03.7669778Z Get:21 http://security.ubuntu.com/ubuntu focal-security/main amd64 Packages [687 kB] 2021-06-03T19:01:04.0503400Z Get:22 http://security.ubuntu.com/ubuntu focal-security/main Translation-en [138 kB] 2021-06-03T19:01:04.0590189Z Get:23 http://security.ubuntu.com/ubuntu focal-security/main amd64 c-n-f Metadata [7780 B] 2021-06-03T19:01:04.0594783Z Get:24 http://security.ubuntu.com/ubuntu focal-security/restricted amd64 Packages [222 kB] 2021-06-03T19:01:04.0740015Z Get:25 http://security.ubuntu.com/ubuntu focal-security/restricted Translation-en [32.7 kB] 2021-06-03T19:01:04.0757215Z Get:26 http://security.ubuntu.com/ubuntu focal-security/restricted amd64 c-n-f Metadata [456 B] 2021-06-03T19:01:04.0766483Z Get:27 http://security.ubuntu.com/ubuntu focal-security/universe amd64 Packages [588 kB] 2021-06-03T19:01:04.1340282Z Get:28 http://security.ubuntu.com/ubuntu focal-security/universe Translation-en [94.6 kB] 2021-06-03T19:01:04.1399780Z Get:29 http://security.ubuntu.com/ubuntu focal-security/universe amd64 c-n-f Metadata [11.5 kB] 2021-06-03T19:01:04.1409728Z Get:30 http://security.ubuntu.com/ubuntu focal-security/multiverse amd64 Packages [19.9 kB] 2021-06-03T19:01:12.7403697Z Fetched 4758 kB in 2s (3119 kB/s) 2021-06-03T19:01:13.6367884Z Reading package lists... 2021-06-03T19:01:13.6607824Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get update -y -qq 2021-06-03T19:01:15.6653052Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get install -y gdebi-core qpdf devscripts 2021-06-03T19:01:15.7496915Z Reading package lists... 2021-06-03T19:01:15.9097119Z Building dependency tree... 2021-06-03T19:01:15.9113985Z Reading state information... 2021-06-03T19:01:16.0734370Z The following additional packages will be installed: 2021-06-03T19:01:16.0736890Z dctrl-tools diffstat dput gettext intltool-debian libapt-pkg-perl 2021-06-03T19:01:16.0738666Z libarchive-zip-perl libarray-intspan-perl libasync-mergepoint-perl 2021-06-03T19:01:16.0740481Z libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl 2021-06-03T19:01:16.0743115Z libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl 2021-06-03T19:01:16.0744833Z libconst-fast-perl libcontextual-return-perl libcpanel-json-xs-perl 2021-06-03T19:01:16.0760386Z libcroco3 libdata-optlist-perl libdevel-callchecker-perl libdevel-size-perl 2021-06-03T19:01:16.0762604Z libdigest-bubblebabble-perl libdigest-hmac-perl libdistro-info-perl 2021-06-03T19:01:16.0764092Z libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl 2021-06-03T19:01:16.0766358Z libfile-chdir-perl libfile-find-rule-perl libfile-homedir-perl 2021-06-03T19:01:16.0768110Z libfile-which-perl libfont-ttf-perl libfuture-perl 2021-06-03T19:01:16.0770503Z libgetopt-long-descriptive-perl libgit-wrapper-perl libgitlab-api-v4-perl 2021-06-03T19:01:16.0773002Z libhash-fieldhash-perl libhttp-tiny-multipart-perl libimport-into-perl 2021-06-03T19:01:16.0774641Z libio-async-loop-epoll-perl libio-async-perl libio-prompter-perl 2021-06-03T19:01:16.0776411Z libio-pty-perl libio-string-perl libipc-run-perl libjson-maybexs-perl 2021-06-03T19:01:16.0780402Z liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl 2021-06-03T19:01:16.0781988Z liblist-someutils-perl liblist-someutils-xs-perl 2021-06-03T19:01:16.0783946Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-06-03T19:01:16.0785725Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-06-03T19:01:16.0787567Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-06-03T19:01:16.0789156Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-06-03T19:01:16.0790968Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-06-03T19:01:16.0797110Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-06-03T19:01:16.0829222Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-06-03T19:01:16.0833916Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-06-03T19:01:16.0835436Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-06-03T19:01:16.0836889Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-06-03T19:01:16.0838499Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-06-03T19:01:16.0839907Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-06-03T19:01:16.0841347Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-06-03T19:01:16.0843038Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-06-03T19:01:16.0844599Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-06-03T19:01:16.0846108Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-06-03T19:01:16.0847670Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-06-03T19:01:16.0848942Z libtype-tiny-perl libtype-tiny-xs-perl libunicode-utf8-perl 2021-06-03T19:01:16.0850276Z libvariable-magic-perl libwant-perl libxml-writer-perl libyaml-libyaml-perl 2021-06-03T19:01:16.0852490Z licensecheck lintian patchutils python3-gpg python3-magic python3-unidiff 2021-06-03T19:01:16.0853793Z python3-xdg t1utils wdiff 2021-06-03T19:01:16.0854608Z Suggested packages: 2021-06-03T19:01:16.0855513Z debtags adequate autopkgtest bls-standalone bsd-mailx | mailx 2021-06-03T19:01:16.0858216Z check-all-the-things cvs-buildpackage debhelper devscripts-el diffoscope 2021-06-03T19:01:16.0859738Z disorderfs dose-extra duck faketime gnuplot how-can-i-help libdbd-pg-perl 2021-06-03T19:01:16.0861234Z libnet-smtps-perl libterm-size-perl libyaml-syck-perl mozilla-devscripts 2021-06-03T19:01:16.0862411Z mutt piuparts quilt ratt reprotest svn-buildpackage w3m debian-keyring 2021-06-03T19:01:16.0863499Z equivs libsoap-lite-perl python3-paramiko mini-dinstall gettext-doc 2021-06-03T19:01:16.0865152Z autopoint libasprintf-dev libgettextpo-dev libossp-uuid-perl 2021-06-03T19:01:16.0866448Z libscalar-number-perl libbareword-filehandles-perl libindirect-perl 2021-06-03T19:01:16.0868312Z libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl 2021-06-03T19:01:16.0869678Z binutils-multiarch libtext-template-perl wdiff-doc 2021-06-03T19:01:16.2286824Z The following NEW packages will be installed: 2021-06-03T19:01:16.2289187Z dctrl-tools devscripts diffstat dput gdebi-core gettext intltool-debian 2021-06-03T19:01:16.2290824Z libapt-pkg-perl libarchive-zip-perl libarray-intspan-perl 2021-06-03T19:01:16.2293106Z libasync-mergepoint-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl 2021-06-03T19:01:16.2294698Z libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl 2021-06-03T19:01:16.2296089Z libclone-perl libconst-fast-perl libcontextual-return-perl 2021-06-03T19:01:16.2297236Z libcpanel-json-xs-perl libcroco3 libdata-optlist-perl 2021-06-03T19:01:16.2298542Z libdevel-callchecker-perl libdevel-size-perl libdigest-bubblebabble-perl 2021-06-03T19:01:16.2300356Z libdigest-hmac-perl libdistro-info-perl libdynaloader-functions-perl 2021-06-03T19:01:16.2302168Z libemail-valid-perl libexporter-tiny-perl libfile-chdir-perl 2021-06-03T19:01:16.2303804Z libfile-find-rule-perl libfile-homedir-perl libfile-which-perl 2021-06-03T19:01:16.2305592Z libfont-ttf-perl libfuture-perl libgetopt-long-descriptive-perl 2021-06-03T19:01:16.2307250Z libgit-wrapper-perl libgitlab-api-v4-perl libhash-fieldhash-perl 2021-06-03T19:01:16.2309462Z libhttp-tiny-multipart-perl libimport-into-perl libio-async-loop-epoll-perl 2021-06-03T19:01:16.2310907Z libio-async-perl libio-prompter-perl libio-pty-perl libio-string-perl 2021-06-03T19:01:16.2312138Z libipc-run-perl libjson-maybexs-perl liblinux-epoll-perl 2021-06-03T19:01:16.2313419Z liblist-compare-perl liblist-moreutils-perl liblist-someutils-perl 2021-06-03T19:01:16.2314885Z liblist-someutils-xs-perl liblog-any-adapter-screen-perl liblog-any-perl 2021-06-03T19:01:16.2316367Z libmodule-implementation-perl libmodule-runtime-perl libmoo-perl 2021-06-03T19:01:16.2317728Z libmoox-aliases-perl libmoox-struct-perl libnamespace-clean-perl 2021-06-03T19:01:16.2319092Z libnet-dns-perl libnet-dns-sec-perl libnet-domain-tld-perl libnet-ip-perl 2021-06-03T19:01:16.2320432Z libnet-libidn-perl libnumber-compare-perl libnumber-range-perl 2021-06-03T19:01:16.2321744Z libobject-id-perl libpackage-stash-perl libpackage-stash-xs-perl 2021-06-03T19:01:16.2323125Z libparams-classify-perl libparams-util-perl libparams-validate-perl 2021-06-03T19:01:16.2324731Z libpath-iterator-rule-perl libpath-tiny-perl libperl4-corelibs-perl 2021-06-03T19:01:16.2326201Z libperlio-gzip-perl libpod-constants-perl libqpdf26 libre-engine-re2-perl 2021-06-03T19:01:16.2327452Z libreadonly-perl libref-util-perl libref-util-xs-perl 2021-06-03T19:01:16.2328944Z libregexp-pattern-license-perl libregexp-pattern-perl librole-tiny-perl 2021-06-03T19:01:16.2330522Z libsereal-decoder-perl libsereal-encoder-perl libsereal-perl 2021-06-03T19:01:16.2331730Z libsort-key-perl libsort-versions-perl libstrictures-perl 2021-06-03T19:01:16.2339275Z libstring-copyright-perl libstring-escape-perl libstring-shellquote-perl 2021-06-03T19:01:16.2341385Z libstruct-dumb-perl libsub-exporter-perl libsub-exporter-progressive-perl 2021-06-03T19:01:16.2343135Z libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl 2021-06-03T19:01:16.2344687Z libterm-readkey-perl libtest-fatal-perl libtest-refcount-perl 2021-06-03T19:01:16.2346200Z libtext-glob-perl libtext-levenshtein-perl libtype-tiny-perl 2021-06-03T19:01:16.2347721Z libtype-tiny-xs-perl libunicode-utf8-perl libvariable-magic-perl 2021-06-03T19:01:16.2487673Z libwant-perl libxml-writer-perl libyaml-libyaml-perl licensecheck lintian 2021-06-03T19:01:16.2494755Z patchutils python3-gpg python3-magic python3-unidiff python3-xdg qpdf 2021-06-03T19:01:16.2495873Z t1utils wdiff 2021-06-03T19:01:16.2560946Z 0 upgraded, 126 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:01:16.2561603Z Need to get 8451 kB of archives. 2021-06-03T19:01:16.2562266Z After this operation, 31.7 MB of additional disk space will be used. 2021-06-03T19:01:16.2563768Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dctrl-tools amd64 2.24-3 [61.5 kB] 2021-06-03T19:01:16.2590553Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-which-perl all 1.23-1 [13.8 kB] 2021-06-03T19:01:16.2598645Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-homedir-perl all 1.004-1 [37.3 kB] 2021-06-03T19:01:16.2608679Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-pty-perl amd64 1:1.12-1 [32.4 kB] 2021-06-03T19:01:16.2624929Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libipc-run-perl all 20180523.0-2 [89.7 kB] 2021-06-03T19:01:16.2646955Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-method-modifiers-perl all 2.13-1 [16.2 kB] 2021-06-03T19:01:16.2656953Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-op-check-perl amd64 0.22-1build2 [10.2 kB] 2021-06-03T19:01:16.2664998Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdynaloader-functions-perl all 0.003-1 [11.9 kB] 2021-06-03T19:01:16.2670511Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-callchecker-perl amd64 0.008-1ubuntu1 [14.5 kB] 2021-06-03T19:01:16.2678495Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-classify-perl amd64 0.015-1build2 [21.1 kB] 2021-06-03T19:01:16.2685561Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-runtime-perl all 0.016-1 [16.2 kB] 2021-06-03T19:01:16.2692650Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimport-into-perl all 1.002005-1 [11.0 kB] 2021-06-03T19:01:16.2708788Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librole-tiny-perl all 2.001004-1 [16.5 kB] 2021-06-03T19:01:16.2722485Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstrictures-perl all 2.000006-1 [16.3 kB] 2021-06-03T19:01:16.2724480Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-quote-perl all 2.006006-1 [19.5 kB] 2021-06-03T19:01:16.2726126Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoo-perl all 2.003006-1 [46.3 kB] 2021-06-03T19:01:16.2739693Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 patchutils amd64 0.3.4-2 [71.1 kB] 2021-06-03T19:01:16.2748643Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 wdiff amd64 1.2.2-2build1 [29.8 kB] 2021-06-03T19:01:16.2759005Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 devscripts amd64 2.20.2ubuntu2 [940 kB] 2021-06-03T19:01:16.2968530Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 diffstat amd64 1.63-1 [27.2 kB] 2021-06-03T19:01:16.2970742Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-gpg amd64 1.13.1-7ubuntu2 [165 kB] 2021-06-03T19:01:16.2985491Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dput all 1.0.3ubuntu1 [42.3 kB] 2021-06-03T19:01:16.2997457Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdebi-core all 0.9.5.7+nmu3 [116 kB] 2021-06-03T19:01:16.3023241Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB] 2021-06-03T19:01:16.3050381Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gettext amd64 0.19.8.1-10build1 [895 kB] 2021-06-03T19:01:16.3231948Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] 2021-06-03T19:01:16.3248230Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libapt-pkg-perl amd64 0.1.36build3 [68.5 kB] 2021-06-03T19:01:16.3271210Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-zip-perl all 1.67-2 [90.5 kB] 2021-06-03T19:01:16.3296543Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarray-intspan-perl all 2.003-1 [23.3 kB] 2021-06-03T19:01:16.3305237Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasync-mergepoint-perl all 0.04-2 [10.2 kB] 2021-06-03T19:01:16.3311345Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-implementation-perl all 0.09-1 [12.2 kB] 2021-06-03T19:01:16.3320352Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [6784 B] 2021-06-03T19:01:16.3329447Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvariable-magic-perl amd64 0.62-1build2 [34.4 kB] 2021-06-03T19:01:16.3343203Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-endofscope-perl all 0.24-1 [16.8 kB] 2021-06-03T19:01:16.3351834Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcapture-tiny-perl all 0.48-1 [20.4 kB] 2021-06-03T19:01:16.3363258Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-xsaccessor-perl amd64 1.19-3build3 [33.6 kB] 2021-06-03T19:01:16.3374381Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclone-perl amd64 0.43-2 [11.0 kB] 2021-06-03T19:01:16.3380582Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-util-perl amd64 1.07-3build5 [19.7 kB] 2021-06-03T19:01:16.3420278Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-install-perl all 0.928-1 [10.5 kB] 2021-06-03T19:01:16.3427353Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdata-optlist-perl all 0.110-1 [9956 B] 2021-06-03T19:01:16.3436755Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-perl all 0.987-1 [44.9 kB] 2021-06-03T19:01:16.3446677Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libconst-fast-perl all 0.014-1 [7958 B] 2021-06-03T19:01:16.3452260Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwant-perl amd64 0.29-1build4 [24.2 kB] 2021-06-03T19:01:16.3459575Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcontextual-return-perl all 0.004014-2 [53.1 kB] 2021-06-03T19:01:16.3467839Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcpanel-json-xs-perl amd64 4.19-1build1 [109 kB] 2021-06-03T19:01:16.3482049Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-bubblebabble-perl all 0.02-2 [7908 B] 2021-06-03T19:01:16.3494686Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.3 kB] 2021-06-03T19:01:16.3503846Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdistro-info-perl all 0.23ubuntu1 [4668 B] 2021-06-03T19:01:16.3510707Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-ip-perl all 1.26-2 [27.4 kB] 2021-06-03T19:01:16.3521197Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-perl all 1.22-1 [336 kB] 2021-06-03T19:01:16.3605488Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-domain-tld-perl all 1.75-1 [29.1 kB] 2021-06-03T19:01:16.3614220Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libemail-valid-perl all 1.202-1 [16.3 kB] 2021-06-03T19:01:16.3623206Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libexporter-tiny-perl all 1.002001-1 [35.5 kB] 2021-06-03T19:01:16.3631406Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-chdir-perl all 0.1008-1 [11.7 kB] 2021-06-03T19:01:16.3638768Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-compare-perl all 0.03-1 [7318 B] 2021-06-03T19:01:16.3644739Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-glob-perl all 0.10-1 [7554 B] 2021-06-03T19:01:16.3650265Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-find-rule-perl all 0.34-1 [28.3 kB] 2021-06-03T19:01:16.3658080Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-string-perl all 1.08-3 [11.1 kB] 2021-06-03T19:01:16.3664981Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfont-ttf-perl all 1.06-1 [313 kB] 2021-06-03T19:01:16.3720025Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfuture-perl all 0.43-1 [77.8 kB] 2021-06-03T19:01:16.3749591Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-validate-perl amd64 1.29-3 [52.7 kB] 2021-06-03T19:01:16.3751906Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgetopt-long-descriptive-perl all 0.104-1 [24.6 kB] 2021-06-03T19:01:16.3754303Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-versions-perl all 1.62-1 [9294 B] 2021-06-03T19:01:16.3757342Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgit-wrapper-perl all 0.048-1 [29.9 kB] 2021-06-03T19:01:16.3765719Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhttp-tiny-multipart-perl all 0.08-1 [8488 B] 2021-06-03T19:01:16.3773670Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-prompter-perl all 0.004015-1 [58.1 kB] 2021-06-03T19:01:16.3782959Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-perl all 1.708-1 [67.8 kB] 2021-06-03T19:01:16.3800728Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-adapter-screen-perl all 0.140-1 [12.1 kB] 2021-06-03T19:01:16.3811630Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-perl all 0.38-1 [19.1 kB] 2021-06-03T19:01:16.3829016Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-identify-perl amd64 0.14-1build2 [10.7 kB] 2021-06-03T19:01:16.3923031Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-name-perl amd64 0.26-1 [11.5 kB] 2021-06-03T19:01:16.3925258Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnamespace-clean-perl all 0.27-1 [13.6 kB] 2021-06-03T19:01:16.3927222Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-tiny-perl all 0.108-1 [42.6 kB] 2021-06-03T19:01:16.3929490Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-perl all 1.008001-2 [304 kB] 2021-06-03T19:01:16.3931383Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgitlab-api-v4-perl all 0.25-1 [83.8 kB] 2021-06-03T19:01:16.3934465Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhash-fieldhash-perl amd64 0.15-1build2 [16.9 kB] 2021-06-03T19:01:16.3936790Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstruct-dumb-perl all 0.09-1 [10.5 kB] 2021-06-03T19:01:16.3945264Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-perl all 0.75-1 [254 kB] 2021-06-03T19:01:16.3998722Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.0 kB] 2021-06-03T19:01:16.4005645Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-loop-epoll-perl all 0.20-1 [10.4 kB] 2021-06-03T19:01:16.4012803Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-maybexs-perl all 1.004000-1 [11.0 kB] 2021-06-03T19:01:16.4019043Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-compare-perl all 0.53-1 [65.6 kB] 2021-06-03T19:01:16.4028770Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-moreutils-perl amd64 0.416-1build5 [55.5 kB] 2021-06-03T19:01:16.4042357Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-perl all 0.58-1 [29.7 kB] 2021-06-03T19:01:16.4051091Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-xs-perl amd64 0.58-2 [32.5 kB] 2021-06-03T19:01:16.4065995Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-aliases-perl all 0.001006-1 [7176 B] 2021-06-03T19:01:16.4071620Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libobject-id-perl all 0.1.2-2ubuntu1 [15.9 kB] 2021-06-03T19:01:16.4080405Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-struct-perl all 0.017-1 [23.4 kB] 2021-06-03T19:01:16.4088454Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-sec-perl amd64 1.15-1 [44.6 kB] 2021-06-03T19:01:16.4098688Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-libidn-perl amd64 0.12.ds-3build2 [17.3 kB] 2021-06-03T19:01:16.4106253Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-range-perl all 0.12-1 [8556 B] 2021-06-03T19:01:16.4111614Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-xs-perl amd64 0.29-1build1 [18.4 kB] 2021-06-03T19:01:16.4118699Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-iterator-rule-perl all 1.014-1 [49.5 kB] 2021-06-03T19:01:16.4128194Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperl4-corelibs-perl all 0.004-2 [37.4 kB] 2021-06-03T19:01:16.4141071Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperlio-gzip-perl amd64 0.19-1build5 [14.6 kB] 2021-06-03T19:01:16.4149996Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpod-constants-perl all 0.19-1 [16.0 kB] 2021-06-03T19:01:16.4155897Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqpdf26 amd64 9.1.1-1build1 [421 kB] 2021-06-03T19:01:16.4235406Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libre-engine-re2-perl amd64 0.13-5 [16.2 kB] 2021-06-03T19:01:16.4250193Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libreadonly-perl all 2.050-2 [19.9 kB] 2021-06-03T19:01:16.4271964Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-perl all 0.204-1 [15.0 kB] 2021-06-03T19:01:16.4273747Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-xs-perl amd64 0.117-1build2 [12.0 kB] 2021-06-03T19:01:16.4301301Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-license-perl all 3.2.0-1 [36.2 kB] 2021-06-03T19:01:16.4327482Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-perl all 0.2.12-1 [17.1 kB] 2021-06-03T19:01:16.4340465Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-decoder-perl amd64 4.011+ds-1build1 [102 kB] 2021-06-03T19:01:16.4362824Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-encoder-perl amd64 4.011+ds-1build1 [104 kB] 2021-06-03T19:01:16.4386728Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-perl all 4.011-1 [8604 B] 2021-06-03T19:01:16.4400440Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-key-perl amd64 1.33-2build2 [35.4 kB] 2021-06-03T19:01:16.4408269Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-copyright-perl all 0.003006-1 [9608 B] 2021-06-03T19:01:16.4415966Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-escape-perl all 2010.002-2 [17.6 kB] 2021-06-03T19:01:16.4422686Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-shellquote-perl all 1.04-1 [12.0 kB] 2021-06-03T19:01:16.4428453Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libterm-readkey-perl amd64 2.38-1build1 [24.6 kB] 2021-06-03T19:01:16.4436821Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-fatal-perl all 0.014-1 [11.1 kB] 2021-06-03T19:01:16.4547336Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-refcount-perl all 0.10-1 [11.4 kB] 2021-06-03T19:01:16.4558609Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-levenshtein-perl all 0.13-1 [9612 B] 2021-06-03T19:01:16.4567708Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-xs-perl amd64 0.016-1 [22.9 kB] 2021-06-03T19:01:16.4574041Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libunicode-utf8-perl amd64 0.62-1build1 [18.1 kB] 2021-06-03T19:01:16.4584738Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxml-writer-perl all 0.625-1 [24.9 kB] 2021-06-03T19:01:16.4593750Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [28.5 kB] 2021-06-03T19:01:16.4602054Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 licensecheck all 3.0.45-1 [23.9 kB] 2021-06-03T19:01:16.4608752Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-size-perl amd64 0.83-1build1 [20.0 kB] 2021-06-03T19:01:16.4614324Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 t1utils amd64 1.41-3 [56.1 kB] 2021-06-03T19:01:16.4623967Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 lintian all 2.62.0 [980 kB] 2021-06-03T19:01:16.4818653Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-unidiff all 0.5.5-2 [9180 B] 2021-06-03T19:01:16.4844502Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-xdg all 0.26-1ubuntu1 [36.1 kB] 2021-06-03T19:01:16.4846074Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qpdf amd64 9.1.1-1build1 [476 kB] 2021-06-03T19:01:16.4936808Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-magic all 2:0.4.15-3 [9376 B] 2021-06-03T19:01:17.3944282Z Fetched 8451 kB in 0s (33.4 MB/s) 2021-06-03T19:01:17.5406312Z Selecting previously unselected package dctrl-tools. 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2021-06-03T19:01:27.1320631Z (Reading database ... 90% 2021-06-03T19:01:28.5412849Z (Reading database ... 95% 2021-06-03T19:01:28.5413743Z (Reading database ... 100% 2021-06-03T19:01:28.5414558Z (Reading database ... 230729 files and directories currently installed.) 2021-06-03T19:01:28.5536535Z Preparing to unpack .../000-dctrl-tools_2.24-3_amd64.deb ... 2021-06-03T19:01:28.5689506Z Unpacking dctrl-tools (2.24-3) ... 2021-06-03T19:01:28.6270424Z Selecting previously unselected package libfile-which-perl. 2021-06-03T19:01:28.6484307Z Preparing to unpack .../001-libfile-which-perl_1.23-1_all.deb ... 2021-06-03T19:01:28.6511402Z Unpacking libfile-which-perl (1.23-1) ... 2021-06-03T19:01:28.6821078Z Selecting previously unselected package libfile-homedir-perl. 2021-06-03T19:01:28.7078393Z Preparing to unpack .../002-libfile-homedir-perl_1.004-1_all.deb ... 2021-06-03T19:01:28.7094915Z Unpacking libfile-homedir-perl (1.004-1) ... 2021-06-03T19:01:28.7717292Z Selecting previously unselected package libio-pty-perl. 2021-06-03T19:01:28.7903791Z Preparing to unpack .../003-libio-pty-perl_1%3a1.12-1_amd64.deb ... 2021-06-03T19:01:28.7922755Z Unpacking libio-pty-perl (1:1.12-1) ... 2021-06-03T19:01:28.8272014Z Selecting previously unselected package libipc-run-perl. 2021-06-03T19:01:28.8516909Z Preparing to unpack .../004-libipc-run-perl_20180523.0-2_all.deb ... 2021-06-03T19:01:28.8535865Z Unpacking libipc-run-perl (20180523.0-2) ... 2021-06-03T19:01:28.9000825Z Selecting previously unselected package libclass-method-modifiers-perl. 2021-06-03T19:01:28.9255595Z Preparing to unpack .../005-libclass-method-modifiers-perl_2.13-1_all.deb ... 2021-06-03T19:01:28.9270452Z Unpacking libclass-method-modifiers-perl (2.13-1) ... 2021-06-03T19:01:28.9589597Z Selecting previously unselected package libb-hooks-op-check-perl. 2021-06-03T19:01:28.9814529Z Preparing to unpack .../006-libb-hooks-op-check-perl_0.22-1build2_amd64.deb ... 2021-06-03T19:01:28.9829733Z Unpacking 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libmodule-runtime-perl. 2021-06-03T19:01:29.2096700Z Preparing to unpack .../010-libmodule-runtime-perl_0.016-1_all.deb ... 2021-06-03T19:01:29.2126158Z Unpacking libmodule-runtime-perl (0.016-1) ... 2021-06-03T19:01:29.2390269Z Selecting previously unselected package libimport-into-perl. 2021-06-03T19:01:29.2633734Z Preparing to unpack .../011-libimport-into-perl_1.002005-1_all.deb ... 2021-06-03T19:01:29.2644866Z Unpacking libimport-into-perl (1.002005-1) ... 2021-06-03T19:01:29.2950377Z Selecting previously unselected package librole-tiny-perl. 2021-06-03T19:01:29.3160670Z Preparing to unpack .../012-librole-tiny-perl_2.001004-1_all.deb ... 2021-06-03T19:01:29.3173980Z Unpacking librole-tiny-perl (2.001004-1) ... 2021-06-03T19:01:29.3470897Z Selecting previously unselected package libstrictures-perl. 2021-06-03T19:01:29.3667255Z Preparing to unpack .../013-libstrictures-perl_2.000006-1_all.deb ... 2021-06-03T19:01:29.3680309Z Unpacking libstrictures-perl (2.000006-1) ... 2021-06-03T19:01:29.3949930Z Selecting previously unselected package libsub-quote-perl. 2021-06-03T19:01:29.4200791Z Preparing to unpack .../014-libsub-quote-perl_2.006006-1_all.deb ... 2021-06-03T19:01:29.4211656Z Unpacking libsub-quote-perl (2.006006-1) ... 2021-06-03T19:01:29.4510068Z Selecting previously unselected package libmoo-perl. 2021-06-03T19:01:29.4718275Z Preparing to unpack .../015-libmoo-perl_2.003006-1_all.deb ... 2021-06-03T19:01:29.4729962Z Unpacking libmoo-perl (2.003006-1) ... 2021-06-03T19:01:29.5029399Z Selecting previously unselected package patchutils. 2021-06-03T19:01:29.5260989Z Preparing to unpack .../016-patchutils_0.3.4-2_amd64.deb ... 2021-06-03T19:01:29.5272917Z Unpacking patchutils (0.3.4-2) ... 2021-06-03T19:01:29.5607201Z Selecting previously unselected package wdiff. 2021-06-03T19:01:29.5903390Z Preparing to unpack .../017-wdiff_1.2.2-2build1_amd64.deb ... 2021-06-03T19:01:29.5916468Z Unpacking wdiff (1.2.2-2build1) ... 2021-06-03T19:01:29.6389260Z Selecting previously unselected package devscripts. 2021-06-03T19:01:29.6608063Z Preparing to unpack .../018-devscripts_2.20.2ubuntu2_amd64.deb ... 2021-06-03T19:01:29.6858301Z Unpacking devscripts (2.20.2ubuntu2) ... 2021-06-03T19:01:29.8172152Z Selecting previously unselected package diffstat. 2021-06-03T19:01:29.8435676Z Preparing to unpack .../019-diffstat_1.63-1_amd64.deb ... 2021-06-03T19:01:29.8449509Z Unpacking diffstat (1.63-1) ... 2021-06-03T19:01:29.8729775Z Selecting previously unselected package python3-gpg. 2021-06-03T19:01:29.8984759Z Preparing to unpack .../020-python3-gpg_1.13.1-7ubuntu2_amd64.deb ... 2021-06-03T19:01:29.8999188Z Unpacking python3-gpg (1.13.1-7ubuntu2) ... 2021-06-03T19:01:29.9548948Z Selecting previously unselected package dput. 2021-06-03T19:01:29.9735444Z Preparing to unpack .../021-dput_1.0.3ubuntu1_all.deb ... 2021-06-03T19:01:29.9810049Z Unpacking dput (1.0.3ubuntu1) ... 2021-06-03T19:01:30.0151081Z Selecting previously unselected package gdebi-core. 2021-06-03T19:01:30.0461895Z Preparing to unpack .../022-gdebi-core_0.9.5.7+nmu3_all.deb ... 2021-06-03T19:01:30.0472917Z Unpacking gdebi-core (0.9.5.7+nmu3) ... 2021-06-03T19:01:30.1994481Z Selecting previously unselected package libcroco3:amd64. 2021-06-03T19:01:30.2255506Z Preparing to unpack .../023-libcroco3_0.6.13-1_amd64.deb ... 2021-06-03T19:01:30.2530161Z Unpacking libcroco3:amd64 (0.6.13-1) ... 2021-06-03T19:01:30.2865955Z Selecting previously unselected package gettext. 2021-06-03T19:01:30.3116487Z Preparing to unpack .../024-gettext_0.19.8.1-10build1_amd64.deb ... 2021-06-03T19:01:30.3128416Z Unpacking gettext (0.19.8.1-10build1) ... 2021-06-03T19:01:30.5262856Z Selecting previously unselected package intltool-debian. 2021-06-03T19:01:30.5528575Z Preparing to unpack .../025-intltool-debian_0.35.0+20060710.5_all.deb ... 2021-06-03T19:01:30.5538046Z Unpacking intltool-debian (0.35.0+20060710.5) ... 2021-06-03T19:01:30.5789968Z Selecting previously unselected package libapt-pkg-perl. 2021-06-03T19:01:30.6050753Z Preparing to unpack .../026-libapt-pkg-perl_0.1.36build3_amd64.deb ... 2021-06-03T19:01:30.6065420Z Unpacking libapt-pkg-perl (0.1.36build3) ... 2021-06-03T19:01:30.6429352Z Selecting previously unselected package libarchive-zip-perl. 2021-06-03T19:01:30.6620309Z Preparing to unpack .../027-libarchive-zip-perl_1.67-2_all.deb ... 2021-06-03T19:01:30.6637286Z Unpacking libarchive-zip-perl (1.67-2) ... 2021-06-03T19:01:30.6992337Z Selecting previously unselected package libarray-intspan-perl. 2021-06-03T19:01:30.7243507Z Preparing to unpack .../028-libarray-intspan-perl_2.003-1_all.deb ... 2021-06-03T19:01:30.7253632Z Unpacking libarray-intspan-perl (2.003-1) ... 2021-06-03T19:01:30.7549629Z Selecting previously unselected package libasync-mergepoint-perl. 2021-06-03T19:01:30.7723718Z Preparing to unpack .../029-libasync-mergepoint-perl_0.04-2_all.deb ... 2021-06-03T19:01:30.7737181Z Unpacking libasync-mergepoint-perl (0.04-2) ... 2021-06-03T19:01:30.7980427Z Selecting previously unselected package libmodule-implementation-perl. 2021-06-03T19:01:30.8241089Z Preparing to unpack .../030-libmodule-implementation-perl_0.09-1_all.deb ... 2021-06-03T19:01:31.0577988Z Unpacking libmodule-implementation-perl (0.09-1) ... 2021-06-03T19:01:31.0870459Z Selecting previously unselected package libsub-exporter-progressive-perl. 2021-06-03T19:01:31.1202953Z Preparing to unpack .../031-libsub-exporter-progressive-perl_0.001013-1_all.deb ... 2021-06-03T19:01:31.1213707Z Unpacking libsub-exporter-progressive-perl (0.001013-1) ... 2021-06-03T19:01:31.1466685Z Selecting previously unselected package libvariable-magic-perl. 2021-06-03T19:01:31.1732873Z Preparing to unpack .../032-libvariable-magic-perl_0.62-1build2_amd64.deb ... 2021-06-03T19:01:31.1745413Z Unpacking libvariable-magic-perl (0.62-1build2) ... 2021-06-03T19:01:31.2069598Z Selecting previously unselected package libb-hooks-endofscope-perl. 2021-06-03T19:01:31.2294199Z 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previously unselected package libnet-ip-perl. 2021-06-03T19:01:32.0492374Z Preparing to unpack .../048-libnet-ip-perl_1.26-2_all.deb ... 2021-06-03T19:01:32.0502695Z Unpacking libnet-ip-perl (1.26-2) ... 2021-06-03T19:01:32.0871854Z Selecting previously unselected package libnet-dns-perl. 2021-06-03T19:01:32.1110688Z Preparing to unpack .../049-libnet-dns-perl_1.22-1_all.deb ... 2021-06-03T19:01:32.1123733Z Unpacking libnet-dns-perl (1.22-1) ... 2021-06-03T19:01:32.1814585Z Selecting previously unselected package libnet-domain-tld-perl. 2021-06-03T19:01:32.2084685Z Preparing to unpack .../050-libnet-domain-tld-perl_1.75-1_all.deb ... 2021-06-03T19:01:32.2095526Z Unpacking libnet-domain-tld-perl (1.75-1) ... 2021-06-03T19:01:32.2498972Z Selecting previously unselected package libemail-valid-perl. 2021-06-03T19:01:32.2764150Z Preparing to unpack .../051-libemail-valid-perl_1.202-1_all.deb ... 2021-06-03T19:01:32.2779560Z Unpacking libemail-valid-perl (1.202-1) ... 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r-3.5.3 (1) ... 2021-06-03T19:02:01.7148725Z 2021-06-03T19:02:01.7149236Z 2021-06-03T19:02:01.7149724Z Reading state information... Done 2021-06-03T19:02:01.7375245Z [command]/usr/bin/sudo ln -sf /opt/R/3.5.3/bin/R /usr/local/bin/R 2021-06-03T19:02:01.7498536Z [command]/usr/bin/sudo ln -sf /opt/R/3.5.3/bin/Rscript /usr/local/bin/Rscript 2021-06-03T19:02:01.7786939Z ##[group]Run r-lib/actions/setup-tinytex@master 2021-06-03T19:02:01.7787685Z env: 2021-06-03T19:02:01.7789289Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:02:01.7790549Z TIC_DEPLOY_KEY: 2021-06-03T19:02:01.7791797Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:02:01.7793630Z GITHUB_PAT: *** 2021-06-03T19:02:01.7794482Z COVERALLS_TOKEN: *** 2021-06-03T19:02:01.7794976Z continue-on-error: false 2021-06-03T19:02:01.7795623Z VDIFFR_RUN_TESTS: 2021-06-03T19:02:01.7796102Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-03T19:02:01.7797489Z TZ: UTC 2021-06-03T19:02:01.7797934Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-03T19:02:01.7798381Z NOT_CRAN: true 2021-06-03T19:02:01.7798794Z ##[endgroup] 2021-06-03T19:02:01.8461560Z [command]sudo apt-get install -y texinfo 2021-06-03T19:02:02.1481501Z Reading package lists... 2021-06-03T19:02:02.3047957Z Building dependency tree... 2021-06-03T19:02:02.3068838Z Reading state information... 2021-06-03T19:02:02.5402509Z texinfo is already the newest version (6.7.0.dfsg.2-5). 2021-06-03T19:02:02.5403897Z 0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:02:02.9707422Z [command]sh /home/runner/work/_temp/install-unx.sh 2021-06-03T19:02:03.0775649Z --2021-06-03 19:02:03-- https://yihui.org/tinytex/TinyTeX-1.tar.gz 2021-06-03T19:02:03.1358241Z Resolving yihui.org (yihui.org)... 76.223.126.88 2021-06-03T19:02:03.1407642Z Connecting to yihui.org (yihui.org)|76.223.126.88|:443... connected. 2021-06-03T19:02:03.2007228Z HTTP request sent, awaiting response... 301 Moved Permanently 2021-06-03T19:02:03.2011002Z Location: https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu [following] 2021-06-03T19:02:03.2012807Z --2021-06-03 19:02:03-- https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu 2021-06-03T19:02:03.2891387Z Resolving ci.appveyor.com (ci.appveyor.com)... 138.91.141.243 2021-06-03T19:02:03.3112778Z Connecting to ci.appveyor.com (ci.appveyor.com)|138.91.141.243|:443... connected. 2021-06-03T19:02:04.2736897Z HTTP request sent, awaiting response... 302 Found 2021-06-03T19:02:04.2740303Z Location: https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1587/6s6tteapi4k7f57e/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=vtmgbMmNHf2Tofp%2FI8Gcsep2dtGwz8t%2F7ky1pl%2BvPXo%3D&st=2021-06-03T19%3A01%3A04Z&se=2021-06-03T19%3A07%3A04Z&sp=r [following] 2021-06-03T19:02:04.2745112Z --2021-06-03 19:02:04-- https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1587/6s6tteapi4k7f57e/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=vtmgbMmNHf2Tofp%2FI8Gcsep2dtGwz8t%2F7ky1pl%2BvPXo%3D&st=2021-06-03T19%3A01%3A04Z&se=2021-06-03T19%3A07%3A04Z&sp=r 2021-06-03T19:02:04.3402824Z Resolving appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)... 52.239.228.196 2021-06-03T19:02:04.3624715Z Connecting to appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)|52.239.228.196|:443... connected. 2021-06-03T19:02:04.5256530Z HTTP request sent, awaiting response... 200 OK 2021-06-03T19:02:04.5257787Z Length: 67552518 (64M) [application/octet-stream] 2021-06-03T19:02:04.5259420Z Saving to: ‘TinyTeX.tar.gz’ 2021-06-03T19:02:04.7244956Z 2021-06-03T19:02:05.4385928Z 0K ........ ........ ........ ........ 49% 37.2M 1s 2021-06-03T19:02:06.0316480Z 32768K ........ ........ ........ ........ 99% 51.6M 0s 2021-06-03T19:02:06.0319735Z 65536K 100% 16.3M=1.5s 2021-06-03T19:02:06.0320073Z 2021-06-03T19:02:06.0321474Z 2021-06-03 19:02:06 (42.8 MB/s) - ‘TinyTeX.tar.gz’ saved [67552518/67552518] 2021-06-03T19:02:06.0321897Z 2021-06-03T19:02:10.0359863Z tlmgr: setting option sys_bin to /home/runner/bin. 2021-06-03T19:02:10.0361201Z tlmgr: updating /home/runner/.TinyTeX/tlpkg/texlive.tlpdb 2021-06-03T19:02:10.3578213Z ##[group]Run tlmgr update --self 2021-06-03T19:02:10.3578839Z tlmgr update --self 2021-06-03T19:02:10.3579716Z tlmgr install filecontents upquote courier courier-scaled biber biblatex collection-luatex ae thumbpdf grfext 2021-06-03T19:02:10.3580765Z tlmgr update --all 2021-06-03T19:02:10.3627353Z shell: /usr/bin/bash -e {0} 2021-06-03T19:02:10.3627726Z env: 2021-06-03T19:02:10.3628367Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:02:10.3629009Z TIC_DEPLOY_KEY: 2021-06-03T19:02:10.3630535Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:02:10.3633041Z GITHUB_PAT: *** 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[70/89, 00:08/00:08] install: placeat [4k] 2021-06-03T19:02:22.2043322Z [71/89, 00:08/00:08] install: plantuml [3k] 2021-06-03T19:02:22.2798480Z [72/89, 00:08/00:08] install: rsfs [55k] 2021-06-03T19:02:22.3609973Z [73/89, 00:08/00:08] install: selnolig [53k] 2021-06-03T19:02:22.4415044Z [74/89, 00:08/00:08] install: spelling [14k] 2021-06-03T19:02:22.5184602Z [75/89, 00:08/00:08] install: stricttex [2k] 2021-06-03T19:02:22.5953044Z [76/89, 00:08/00:08] install: texlive-common [1k] 2021-06-03T19:02:22.6693314Z [77/89, 00:08/00:08] install: texlive-en [1k] 2021-06-03T19:02:22.7518452Z [78/89, 00:08/00:08] install: texlive-msg-translations [144k] 2021-06-03T19:02:22.8435863Z [79/89, 00:08/00:08] install: thumbpdf.x86_64-linux [1k] 2021-06-03T19:02:22.9173887Z [80/89, 00:08/00:08] install: thumbpdf [19k] 2021-06-03T19:02:22.9941311Z [81/89, 00:08/00:08] install: tlshell.x86_64-linux [1k] 2021-06-03T19:02:23.0696001Z [82/89, 00:09/00:09] install: tlshell [29k] 2021-06-03T19:02:23.1464225Z [83/89, 00:09/00:09] install: typewriter [25k] 2021-06-03T19:02:23.2241109Z [84/89, 00:09/00:09] install: uninormalize [6k] 2021-06-03T19:02:23.3026914Z [85/89, 00:09/00:09] install: upquote [2k] 2021-06-03T19:02:23.3855582Z [86/89, 00:09/00:09] install: xdvi.x86_64-linux [530k] 2021-06-03T19:02:23.5120428Z [87/89, 00:09/00:09] install: xdvi [7k] 2021-06-03T19:02:23.5908355Z [88/89, 00:09/00:09] install: collection-basic [1k] 2021-06-03T19:02:23.6659522Z [89/89, 00:09/00:09] install: collection-luatex [1k] 2021-06-03T19:02:23.6873031Z running mktexlsr ... 2021-06-03T19:02:23.7730881Z done running mktexlsr. 2021-06-03T19:02:23.8031005Z running updmap-sys ... 2021-06-03T19:02:24.0944261Z done running updmap-sys. 2021-06-03T19:02:24.0945798Z regenerating fmtutil.cnf in /home/runner/.TinyTeX/texmf-dist 2021-06-03T19:02:24.0948315Z running fmtutil-sys --byfmt optex --no-error-if-no-engine=luajithbtex,luajittex,mfluajit --status-file=/tmp/tpXhl8fpFN/UMh34riB0h ... 2021-06-03T19:02:24.5395560Z done running fmtutil-sys --byfmt optex --no-error-if-no-engine=luajithbtex,luajittex,mfluajit --status-file=/tmp/tpXhl8fpFN/UMh34riB0h. 2021-06-03T19:02:24.5397411Z OK: optex.fmt/luatex 2021-06-03T19:02:24.5398938Z tlmgr: package log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr.log 2021-06-03T19:02:24.5400830Z tlmgr: command log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr-commands.log 2021-06-03T19:02:26.1666781Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-06-03T19:02:26.1669290Z tlmgr: no updates available 2021-06-03T19:02:26.2685011Z ##[group]Run r-lib/actions/setup-pandoc@master 2021-06-03T19:02:26.2685589Z with: 2021-06-03T19:02:26.2686116Z pandoc-version: 2.7.3 2021-06-03T19:02:26.2686590Z env: 2021-06-03T19:02:26.2687264Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:02:26.2688040Z TIC_DEPLOY_KEY: 2021-06-03T19:02:26.2688945Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:02:26.2690987Z GITHUB_PAT: *** 2021-06-03T19:02:26.2692461Z COVERALLS_TOKEN: *** 2021-06-03T19:02:26.2693022Z continue-on-error: false 2021-06-03T19:02:26.2693736Z VDIFFR_RUN_TESTS: 2021-06-03T19:02:26.2694331Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-03T19:02:26.2694812Z TZ: UTC 2021-06-03T19:02:26.2695292Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-03T19:02:26.2695986Z NOT_CRAN: true 2021-06-03T19:02:26.2696452Z ##[endgroup] 2021-06-03T19:02:26.9044481Z [command]sudo apt-get install -y gdebi-core 2021-06-03T19:02:26.9769775Z Reading package lists... 2021-06-03T19:02:27.1328520Z Building dependency tree... 2021-06-03T19:02:27.1347666Z Reading state information... 2021-06-03T19:02:27.3713283Z gdebi-core is already the newest version (0.9.5.7+nmu3). 2021-06-03T19:02:27.3716340Z 0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:02:27.3754923Z [command]sudo gdebi --non-interactive /home/runner/work/_temp/pandoc-2.7.3-1-amd64.deb 2021-06-03T19:02:27.5111957Z 2021-06-03T19:02:27.5282235Z Reading package lists... 0% 2021-06-03T19:02:27.5283003Z 2021-06-03T19:02:27.5342419Z Reading package lists... 100% 2021-06-03T19:02:27.5342836Z 2021-06-03T19:02:27.5343069Z 2021-06-03T19:02:27.5343886Z Reading package lists... Done 2021-06-03T19:02:27.5344232Z 2021-06-03T19:02:27.5344704Z Building dependency tree... 0% 2021-06-03T19:02:27.5345055Z 2021-06-03T19:02:27.5564103Z Building dependency tree... 0% 2021-06-03T19:02:27.5564500Z 2021-06-03T19:02:27.5564959Z Building dependency tree... 50% 2021-06-03T19:02:27.5565291Z 2021-06-03T19:02:27.6743071Z Building dependency tree... 50% 2021-06-03T19:02:27.6743708Z 2021-06-03T19:02:27.6744930Z Building dependency tree 2021-06-03T19:02:27.6745634Z 2021-06-03T19:02:27.6746173Z Reading state information... 0% 2021-06-03T19:02:27.6746698Z 2021-06-03T19:02:27.8363549Z Reading state information... 0% 2021-06-03T19:02:27.8364483Z 2021-06-03T19:02:27.8364968Z 2021-06-03T19:02:27.8365725Z Reading state information... Done 2021-06-03T19:02:27.8366294Z 2021-06-03T19:02:27.8367010Z Reading state information... 0% 2021-06-03T19:02:27.8421206Z 2021-06-03T19:02:27.8422942Z Reading state information... 1% 2021-06-03T19:02:27.8464946Z 2021-06-03T19:02:27.8465445Z Reading state information... 3% 2021-06-03T19:02:27.8510131Z 2021-06-03T19:02:27.8510830Z Reading state information... 5% 2021-06-03T19:02:27.8560327Z 2021-06-03T19:02:27.8561414Z Reading state information... 7% 2021-06-03T19:02:27.8600761Z 2021-06-03T19:02:27.8601260Z Reading state information... 9% 2021-06-03T19:02:27.8646622Z 2021-06-03T19:02:27.8647220Z Reading state information... 11% 2021-06-03T19:02:27.8687192Z 2021-06-03T19:02:27.8687749Z Reading state information... 13% 2021-06-03T19:02:27.8725620Z 2021-06-03T19:02:27.8726142Z Reading state information... 15% 2021-06-03T19:02:27.8767362Z 2021-06-03T19:02:27.8768070Z Reading state information... 17% 2021-06-03T19:02:27.8809121Z 2021-06-03T19:02:27.8809664Z Reading state information... 19% 2021-06-03T19:02:27.8844833Z 2021-06-03T19:02:27.8845343Z Reading state information... 21% 2021-06-03T19:02:27.8884720Z 2021-06-03T19:02:27.8885279Z Reading state information... 23% 2021-06-03T19:02:27.8926745Z 2021-06-03T19:02:27.8927256Z Reading state information... 25% 2021-06-03T19:02:27.8975431Z 2021-06-03T19:02:27.8975970Z Reading state information... 27% 2021-06-03T19:02:27.9015094Z 2021-06-03T19:02:27.9015613Z Reading state information... 29% 2021-06-03T19:02:27.9062920Z 2021-06-03T19:02:27.9063497Z Reading state information... 31% 2021-06-03T19:02:27.9112222Z 2021-06-03T19:02:27.9113054Z Reading state information... 33% 2021-06-03T19:02:27.9147510Z 2021-06-03T19:02:27.9148229Z Reading state information... 35% 2021-06-03T19:02:27.9190280Z 2021-06-03T19:02:27.9190833Z Reading state information... 37% 2021-06-03T19:02:27.9232176Z 2021-06-03T19:02:27.9232682Z Reading state information... 39% 2021-06-03T19:02:27.9289521Z 2021-06-03T19:02:27.9290033Z Reading state information... 41% 2021-06-03T19:02:27.9320074Z 2021-06-03T19:02:27.9320853Z Reading state information... 43% 2021-06-03T19:02:27.9371467Z 2021-06-03T19:02:27.9372205Z Reading state information... 45% 2021-06-03T19:02:27.9441019Z 2021-06-03T19:02:27.9441567Z Reading state information... 47% 2021-06-03T19:02:27.9484893Z 2021-06-03T19:02:27.9485679Z Reading state information... 49% 2021-06-03T19:02:27.9528964Z 2021-06-03T19:02:27.9529509Z Reading state information... 51% 2021-06-03T19:02:27.9574484Z 2021-06-03T19:02:27.9575271Z Reading state information... 53% 2021-06-03T19:02:27.9615330Z 2021-06-03T19:02:27.9616108Z Reading state information... 55% 2021-06-03T19:02:27.9660208Z 2021-06-03T19:02:27.9660728Z Reading state information... 57% 2021-06-03T19:02:27.9701365Z 2021-06-03T19:02:27.9701922Z Reading state information... 59% 2021-06-03T19:02:27.9754565Z 2021-06-03T19:02:27.9755301Z Reading state information... 61% 2021-06-03T19:02:27.9798630Z 2021-06-03T19:02:27.9799160Z Reading state information... 63% 2021-06-03T19:02:27.9839314Z 2021-06-03T19:02:27.9840038Z Reading state information... 65% 2021-06-03T19:02:27.9883373Z 2021-06-03T19:02:27.9883964Z Reading state information... 67% 2021-06-03T19:02:27.9931151Z 2021-06-03T19:02:27.9931873Z Reading state information... 69% 2021-06-03T19:02:28.0001774Z 2021-06-03T19:02:28.0002525Z Reading state information... 71% 2021-06-03T19:02:28.0044493Z 2021-06-03T19:02:28.0045033Z Reading state information... 73% 2021-06-03T19:02:28.0090223Z 2021-06-03T19:02:28.0090759Z Reading state information... 75% 2021-06-03T19:02:28.0151383Z 2021-06-03T19:02:28.0151963Z Reading state information... 77% 2021-06-03T19:02:28.0199033Z 2021-06-03T19:02:28.0199609Z Reading state information... 79% 2021-06-03T19:02:28.0245479Z 2021-06-03T19:02:28.0246058Z Reading state information... 81% 2021-06-03T19:02:28.0293966Z 2021-06-03T19:02:28.0294635Z Reading state information... 83% 2021-06-03T19:02:28.0339672Z 2021-06-03T19:02:28.0340229Z Reading state information... 85% 2021-06-03T19:02:28.0387532Z 2021-06-03T19:02:28.0388337Z Reading state information... 87% 2021-06-03T19:02:28.0431989Z 2021-06-03T19:02:28.0432702Z Reading state information... 89% 2021-06-03T19:02:28.0472732Z 2021-06-03T19:02:28.0473292Z Reading state information... 91% 2021-06-03T19:02:28.0516885Z 2021-06-03T19:02:28.0517421Z Reading state information... 93% 2021-06-03T19:02:28.0568220Z 2021-06-03T19:02:28.0568730Z Reading state information... 95% 2021-06-03T19:02:28.0625712Z 2021-06-03T19:02:28.0626398Z Reading state information... 97% 2021-06-03T19:02:28.0672169Z 2021-06-03T19:02:28.0672752Z Reading state information... 99% 2021-06-03T19:02:28.3770318Z Selecting previously unselected package pandoc. 2021-06-03T19:02:28.5047391Z (Reading database ... 237717 files and directories currently installed.) 2021-06-03T19:02:28.5186855Z Preparing to unpack .../_temp/pandoc-2.7.3-1-amd64.deb ... 2021-06-03T19:02:28.5203961Z Unpacking pandoc (2.7.3-1) ... 2021-06-03T19:02:30.7615554Z Setting up pandoc (2.7.3-1) ... 2021-06-03T19:02:30.7653330Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:02:31.5619012Z 2021-06-03T19:02:31.5619976Z 2021-06-03T19:02:31.5620785Z Reading state information... Done 2021-06-03T19:02:31.6046418Z ##[group]Run git config user.name adigherman 2021-06-03T19:02:31.6047163Z git config user.name adigherman 2021-06-03T19:02:31.6047748Z git config user.email adig@jhu.edu 2021-06-03T19:02:31.6095916Z shell: /usr/bin/bash -e {0} 2021-06-03T19:02:31.6096341Z env: 2021-06-03T19:02:31.6096846Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:02:31.6097357Z TIC_DEPLOY_KEY: 2021-06-03T19:02:31.6098237Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:02:31.6099951Z GITHUB_PAT: *** 2021-06-03T19:02:31.6100948Z COVERALLS_TOKEN: *** 2021-06-03T19:02:31.6101525Z continue-on-error: false 2021-06-03T19:02:31.6102057Z VDIFFR_RUN_TESTS: 2021-06-03T19:02:31.6102579Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-03T19:02:31.6103071Z TZ: UTC 2021-06-03T19:02:31.6103486Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-03T19:02:31.6103954Z NOT_CRAN: true 2021-06-03T19:02:31.6104384Z ##[endgroup] 2021-06-03T19:02:31.6379775Z ##[group]Run adigherman/actions/install-sysdeps-linux@master 2021-06-03T19:02:31.6380466Z env: 2021-06-03T19:02:31.6380977Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:02:31.6381494Z TIC_DEPLOY_KEY: 2021-06-03T19:02:31.6382341Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:02:31.6384154Z GITHUB_PAT: *** 2021-06-03T19:02:31.6385047Z COVERALLS_TOKEN: *** 2021-06-03T19:02:31.6385563Z continue-on-error: false 2021-06-03T19:02:31.6386237Z VDIFFR_RUN_TESTS: 2021-06-03T19:02:31.6386726Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-03T19:02:31.6387192Z TZ: UTC 2021-06-03T19:02:31.6387611Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-03T19:02:31.6388316Z NOT_CRAN: true 2021-06-03T19:02:31.6388726Z ##[endgroup] 2021-06-03T19:02:31.9531388Z Reading package lists... 2021-06-03T19:02:32.0989795Z Building dependency tree... 2021-06-03T19:02:32.1007702Z Reading state information... 2021-06-03T19:02:32.2376280Z The following additional packages will be installed: 2021-06-03T19:02:32.2380020Z cmake-data libjsoncpp1 librhash0 2021-06-03T19:02:32.2386624Z Suggested packages: 2021-06-03T19:02:32.2389095Z cmake-doc ninja-build 2021-06-03T19:02:32.2910623Z The following NEW packages will be installed: 2021-06-03T19:02:32.2918221Z cmake cmake-data libjsoncpp1 librhash0 2021-06-03T19:02:32.3119668Z 0 upgraded, 4 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:02:32.3120386Z Need to get 5470 kB of archives. 2021-06-03T19:02:32.3121488Z After this operation, 28.3 MB of additional disk space will be used. 2021-06-03T19:02:32.3123237Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake-data all 3.16.3-1ubuntu1 [1612 kB] 2021-06-03T19:02:32.3361932Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjsoncpp1 amd64 1.7.4-3.1ubuntu2 [75.6 kB] 2021-06-03T19:02:32.3378980Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librhash0 amd64 1.3.9-1 [113 kB] 2021-06-03T19:02:32.3410248Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake amd64 3.16.3-1ubuntu1 [3669 kB] 2021-06-03T19:02:32.8885908Z Fetched 5470 kB in 0s (43.7 MB/s) 2021-06-03T19:02:32.9327652Z Selecting previously unselected package cmake-data. 2021-06-03T19:02:32.9403924Z (Reading database ... 2021-06-03T19:02:32.9404498Z (Reading database ... 5% 2021-06-03T19:02:32.9404984Z (Reading database ... 10% 2021-06-03T19:02:32.9405477Z (Reading database ... 15% 2021-06-03T19:02:32.9405970Z (Reading database ... 20% 2021-06-03T19:02:32.9406446Z (Reading database ... 25% 2021-06-03T19:02:32.9406928Z (Reading database ... 30% 2021-06-03T19:02:32.9407393Z (Reading database ... 35% 2021-06-03T19:02:32.9408114Z (Reading database ... 40% 2021-06-03T19:02:32.9408599Z (Reading database ... 45% 2021-06-03T19:02:32.9409764Z (Reading database ... 50% 2021-06-03T19:02:32.9515315Z (Reading database ... 55% 2021-06-03T19:02:32.9572275Z (Reading database ... 60% 2021-06-03T19:02:32.9600599Z (Reading database ... 65% 2021-06-03T19:02:32.9684897Z (Reading database ... 70% 2021-06-03T19:02:32.9715190Z (Reading database ... 75% 2021-06-03T19:02:32.9743965Z (Reading database ... 80% 2021-06-03T19:02:33.0150848Z (Reading database ... 85% 2021-06-03T19:02:33.0226341Z (Reading database ... 90% 2021-06-03T19:02:33.0602405Z (Reading database ... 95% 2021-06-03T19:02:33.0603035Z (Reading database ... 100% 2021-06-03T19:02:33.0603831Z (Reading database ... 237724 files and directories currently installed.) 2021-06-03T19:02:33.0740101Z Preparing to unpack .../cmake-data_3.16.3-1ubuntu1_all.deb ... 2021-06-03T19:02:33.1380395Z Unpacking cmake-data (3.16.3-1ubuntu1) ... 2021-06-03T19:02:33.7509001Z Selecting previously unselected package libjsoncpp1:amd64. 2021-06-03T19:02:33.7801699Z Preparing to unpack .../libjsoncpp1_1.7.4-3.1ubuntu2_amd64.deb ... 2021-06-03T19:02:33.7824791Z Unpacking libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-06-03T19:02:33.8192727Z Selecting previously unselected package librhash0:amd64. 2021-06-03T19:02:33.8454803Z Preparing to unpack .../librhash0_1.3.9-1_amd64.deb ... 2021-06-03T19:02:33.8467578Z Unpacking librhash0:amd64 (1.3.9-1) ... 2021-06-03T19:02:33.8899244Z Selecting previously unselected package cmake. 2021-06-03T19:02:33.9088574Z Preparing to unpack .../cmake_3.16.3-1ubuntu1_amd64.deb ... 2021-06-03T19:02:33.9106565Z Unpacking cmake (3.16.3-1ubuntu1) ... 2021-06-03T19:02:34.3524656Z Setting up librhash0:amd64 (1.3.9-1) ... 2021-06-03T19:02:34.3570094Z Setting up cmake-data (3.16.3-1ubuntu1) ... 2021-06-03T19:02:34.4143196Z Setting up libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-06-03T19:02:34.4174835Z Setting up cmake (3.16.3-1ubuntu1) ... 2021-06-03T19:02:34.4218978Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:02:35.6060146Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:02:37.5709618Z Reading package lists... 2021-06-03T19:02:37.7269740Z Building dependency tree... 2021-06-03T19:02:37.7289265Z Reading state information... 2021-06-03T19:02:37.8862558Z Suggested packages: 2021-06-03T19:02:37.8864478Z libssh-doc 2021-06-03T19:02:37.9480322Z The following NEW packages will be installed: 2021-06-03T19:02:37.9487012Z libssh-dev 2021-06-03T19:02:37.9820967Z 0 upgraded, 1 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:02:37.9822622Z Need to get 219 kB of archives. 2021-06-03T19:02:37.9823634Z After this operation, 1127 kB of additional disk space will be used. 2021-06-03T19:02:37.9825828Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-dev amd64 0.9.3-2ubuntu2.1 [219 kB] 2021-06-03T19:02:38.4791007Z Fetched 219 kB in 0s (4916 kB/s) 2021-06-03T19:02:38.5142450Z Selecting previously unselected package libssh-dev:amd64. 2021-06-03T19:02:38.5213814Z (Reading database ... 2021-06-03T19:02:38.5214663Z (Reading database ... 5% 2021-06-03T19:02:38.5215417Z (Reading database ... 10% 2021-06-03T19:02:38.5216305Z (Reading database ... 15% 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and directories currently installed.) 2021-06-03T19:02:38.6393174Z Preparing to unpack .../libssh-dev_0.9.3-2ubuntu2.1_amd64.deb ... 2021-06-03T19:02:38.6407195Z Unpacking libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-06-03T19:02:38.7279768Z Setting up libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-06-03T19:02:40.6728739Z Reading package lists... 2021-06-03T19:02:40.8257687Z Building dependency tree... 2021-06-03T19:02:40.8279110Z Reading state information... 2021-06-03T19:02:41.0356331Z The following NEW packages will be installed: 2021-06-03T19:02:41.0360121Z jags 2021-06-03T19:02:41.0565153Z 0 upgraded, 1 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:02:41.0566838Z Need to get 1562 kB of archives. 2021-06-03T19:02:41.0569880Z After this operation, 3615 kB of additional disk space will be used. 2021-06-03T19:02:41.0572437Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 jags amd64 4.3.0-3build1 [1562 kB] 2021-06-03T19:02:41.5246440Z Fetched 1562 kB in 0s (33.7 MB/s) 2021-06-03T19:02:41.5589720Z Selecting previously unselected package jags. 2021-06-03T19:02:41.5665023Z (Reading database ... 2021-06-03T19:02:41.5666303Z (Reading database ... 5% 2021-06-03T19:02:41.5667199Z (Reading database ... 10% 2021-06-03T19:02:41.5670394Z (Reading database ... 15% 2021-06-03T19:02:41.5671005Z (Reading database ... 20% 2021-06-03T19:02:41.5671514Z (Reading database ... 25% 2021-06-03T19:02:41.5672001Z (Reading database ... 30% 2021-06-03T19:02:41.5672498Z (Reading database ... 35% 2021-06-03T19:02:41.5672983Z (Reading database ... 40% 2021-06-03T19:02:41.5673488Z (Reading database ... 45% 2021-06-03T19:02:41.5673988Z (Reading database ... 50% 2021-06-03T19:02:41.5771359Z (Reading database ... 55% 2021-06-03T19:02:41.5821607Z (Reading database ... 60% 2021-06-03T19:02:41.5859645Z (Reading database ... 65% 2021-06-03T19:02:41.5935543Z (Reading database ... 70% 2021-06-03T19:02:41.5973371Z (Reading database ... 75% 2021-06-03T19:02:41.6013660Z (Reading database ... 80% 2021-06-03T19:02:41.6403753Z (Reading database ... 85% 2021-06-03T19:02:41.6486069Z (Reading database ... 90% 2021-06-03T19:02:41.6848864Z (Reading database ... 95% 2021-06-03T19:02:41.6849697Z (Reading database ... 100% 2021-06-03T19:02:41.6850575Z (Reading database ... 240527 files and directories currently installed.) 2021-06-03T19:02:41.6967651Z Preparing to unpack .../jags_4.3.0-3build1_amd64.deb ... 2021-06-03T19:02:41.6994318Z Unpacking jags (4.3.0-3build1) ... 2021-06-03T19:02:41.8712262Z Setting up jags (4.3.0-3build1) ... 2021-06-03T19:02:41.9107024Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:02:42.6816844Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:02:44.6564717Z Reading package lists... 2021-06-03T19:02:44.8208387Z Building dependency tree... 2021-06-03T19:02:44.8227856Z Reading state information... 2021-06-03T19:02:44.9810572Z The following additional packages will be installed: 2021-06-03T19:02:44.9813170Z libnode64 libuv1-dev 2021-06-03T19:02:45.0328621Z The following NEW packages will be installed: 2021-06-03T19:02:45.0332372Z libnode-dev libnode64 libuv1-dev 2021-06-03T19:02:45.0523043Z 0 upgraded, 3 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:02:45.0523861Z Need to get 6239 kB of archives. 2021-06-03T19:02:45.0524661Z After this operation, 24.9 MB of additional disk space will be used. 2021-06-03T19:02:45.0526869Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libuv1-dev amd64 1.34.2-1ubuntu1.1 [103 kB] 2021-06-03T19:02:45.0556546Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode64 amd64 10.19.0~dfsg-3ubuntu1 [5765 kB] 2021-06-03T19:02:45.1723387Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode-dev amd64 10.19.0~dfsg-3ubuntu1 [370 kB] 2021-06-03T19:02:45.6188455Z Fetched 6239 kB in 0s (44.7 MB/s) 2021-06-03T19:02:45.6494744Z Selecting previously unselected package libuv1-dev:amd64. 2021-06-03T19:02:45.6575138Z (Reading database ... 2021-06-03T19:02:45.6575675Z (Reading database ... 5% 2021-06-03T19:02:45.6576761Z (Reading database ... 10% 2021-06-03T19:02:45.6578851Z (Reading database ... 15% 2021-06-03T19:02:45.6579405Z (Reading database ... 20% 2021-06-03T19:02:45.6581534Z (Reading database ... 25% 2021-06-03T19:02:45.6582060Z (Reading database ... 30% 2021-06-03T19:02:45.6584005Z (Reading database ... 35% 2021-06-03T19:02:45.6584504Z (Reading database ... 40% 2021-06-03T19:02:45.6586435Z (Reading database ... 45% 2021-06-03T19:02:45.6587048Z (Reading database ... 50% 2021-06-03T19:02:45.6686212Z (Reading database ... 55% 2021-06-03T19:02:45.6736969Z (Reading database ... 60% 2021-06-03T19:02:45.6772997Z (Reading database ... 65% 2021-06-03T19:02:45.6831434Z (Reading database ... 70% 2021-06-03T19:02:45.6864752Z (Reading database ... 75% 2021-06-03T19:02:45.6894116Z (Reading database ... 80% 2021-06-03T19:02:45.7250943Z (Reading database ... 85% 2021-06-03T19:02:45.7320528Z (Reading database ... 90% 2021-06-03T19:02:45.7634288Z (Reading database ... 95% 2021-06-03T19:02:45.7635623Z (Reading database ... 100% 2021-06-03T19:02:45.7636809Z (Reading database ... 240667 files and directories currently installed.) 2021-06-03T19:02:45.7740694Z Preparing to unpack .../libuv1-dev_1.34.2-1ubuntu1.1_amd64.deb ... 2021-06-03T19:02:45.7762396Z Unpacking libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-06-03T19:02:45.8190070Z Selecting previously unselected package libnode64:amd64. 2021-06-03T19:02:45.8414796Z Preparing to unpack .../libnode64_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-06-03T19:02:45.8439962Z Unpacking libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-06-03T19:02:46.5215754Z Selecting previously unselected package libnode-dev:amd64. 2021-06-03T19:02:46.5419506Z Preparing to unpack .../libnode-dev_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-06-03T19:02:46.5435306Z Unpacking libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-06-03T19:02:46.6491437Z Setting up libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-06-03T19:02:46.6538316Z Setting up libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-06-03T19:02:46.6576123Z Setting up libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-06-03T19:02:46.6614364Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:02:48.6535906Z Reading package lists... 2021-06-03T19:02:48.8091725Z Building dependency tree... 2021-06-03T19:02:48.8110079Z Reading state information... 2021-06-03T19:02:48.9714319Z The following additional packages will be installed: 2021-06-03T19:02:48.9716040Z libfftw3-bin libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-06-03T19:02:48.9721496Z Suggested packages: 2021-06-03T19:02:48.9722308Z libfftw3-doc 2021-06-03T19:02:49.0241549Z The following NEW packages will be installed: 2021-06-03T19:02:49.0251179Z libfftw3-bin libfftw3-dev libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-06-03T19:02:49.0486093Z 0 upgraded, 5 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:02:49.0488638Z Need to get 3986 kB of archives. 2021-06-03T19:02:49.0489838Z After this operation, 22.4 MB of additional disk space will be used. 2021-06-03T19:02:49.0492037Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-long3 amd64 3.3.8-2ubuntu1 [313 kB] 2021-06-03T19:02:49.0581442Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-quad3 amd64 3.3.8-2ubuntu1 [673 kB] 2021-06-03T19:02:49.0728136Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-single3 amd64 3.3.8-2ubuntu1 [756 kB] 2021-06-03T19:02:49.0917592Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-bin amd64 3.3.8-2ubuntu1 [32.2 kB] 2021-06-03T19:02:49.0930169Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-dev amd64 3.3.8-2ubuntu1 [2211 kB] 2021-06-03T19:02:49.6271625Z Fetched 3986 kB in 0s (25.7 MB/s) 2021-06-03T19:02:49.6599655Z Selecting previously unselected package libfftw3-long3:amd64. 2021-06-03T19:02:49.6672832Z (Reading database ... 2021-06-03T19:02:49.6673907Z (Reading database ... 5% 2021-06-03T19:02:49.6674745Z (Reading database ... 10% 2021-06-03T19:02:49.6675251Z (Reading database ... 15% 2021-06-03T19:02:49.6675732Z (Reading database ... 20% 2021-06-03T19:02:49.6676266Z (Reading database ... 25% 2021-06-03T19:02:49.6676898Z (Reading database ... 30% 2021-06-03T19:02:49.6678254Z (Reading database ... 35% 2021-06-03T19:02:49.6679104Z (Reading database ... 40% 2021-06-03T19:02:49.6679559Z (Reading database ... 45% 2021-06-03T19:02:49.6680025Z (Reading database ... 50% 2021-06-03T19:02:49.6774697Z (Reading database ... 55% 2021-06-03T19:02:49.6824769Z (Reading database ... 60% 2021-06-03T19:02:49.6858306Z (Reading database ... 65% 2021-06-03T19:02:49.6921863Z (Reading database ... 70% 2021-06-03T19:02:49.6949060Z (Reading database ... 75% 2021-06-03T19:02:49.6972707Z (Reading database ... 80% 2021-06-03T19:02:49.7332484Z (Reading database ... 85% 2021-06-03T19:02:49.7403921Z (Reading database ... 90% 2021-06-03T19:02:49.7722902Z (Reading database ... 95% 2021-06-03T19:02:49.7723936Z (Reading database ... 100% 2021-06-03T19:02:49.7725316Z (Reading database ... 240803 files and directories currently installed.) 2021-06-03T19:02:49.7827219Z Preparing to unpack .../libfftw3-long3_3.3.8-2ubuntu1_amd64.deb ... 2021-06-03T19:02:49.7852582Z Unpacking libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-06-03T19:02:49.8471176Z Selecting previously unselected package libfftw3-quad3:amd64. 2021-06-03T19:02:49.8704258Z Preparing to unpack .../libfftw3-quad3_3.3.8-2ubuntu1_amd64.deb ... 2021-06-03T19:02:49.8720098Z Unpacking libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-06-03T19:02:49.9710411Z Selecting previously unselected package libfftw3-single3:amd64. 2021-06-03T19:02:49.9950698Z Preparing to unpack .../libfftw3-single3_3.3.8-2ubuntu1_amd64.deb ... 2021-06-03T19:02:49.9963520Z Unpacking libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-06-03T19:02:50.1069717Z Selecting previously unselected package libfftw3-bin. 2021-06-03T19:02:50.1276523Z Preparing to unpack .../libfftw3-bin_3.3.8-2ubuntu1_amd64.deb ... 2021-06-03T19:02:50.1288557Z Unpacking libfftw3-bin (3.3.8-2ubuntu1) ... 2021-06-03T19:02:50.1589829Z Selecting previously unselected package libfftw3-dev:amd64. 2021-06-03T19:02:50.1844558Z Preparing to unpack .../libfftw3-dev_3.3.8-2ubuntu1_amd64.deb ... 2021-06-03T19:02:50.1862946Z Unpacking libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-06-03T19:02:50.4857690Z Setting up libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-06-03T19:02:50.4902520Z Setting up libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-06-03T19:02:50.4943754Z Setting up libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-06-03T19:02:50.4977499Z Setting up libfftw3-bin (3.3.8-2ubuntu1) ... 2021-06-03T19:02:50.5013907Z Setting up libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-06-03T19:02:50.5052592Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:02:51.3095016Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:02:53.3267461Z Reading package lists... 2021-06-03T19:02:53.4811022Z Building dependency tree... 2021-06-03T19:02:53.4834665Z Reading state information... 2021-06-03T19:02:53.6461834Z The following additional packages will be installed: 2021-06-03T19:02:53.6464628Z libdcmtk14 2021-06-03T19:02:53.7032455Z The following NEW packages will be installed: 2021-06-03T19:02:53.7041740Z dcmtk libdcmtk14 2021-06-03T19:02:53.7263368Z 0 upgraded, 2 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:02:53.7264303Z Need to get 5546 kB of archives. 2021-06-03T19:02:53.7265178Z After this operation, 26.5 MB of additional disk space will be used. 2021-06-03T19:02:53.7271156Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdcmtk14 amd64 3.6.4-2.1build2 [4682 kB] 2021-06-03T19:02:53.8052195Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 dcmtk amd64 3.6.4-2.1build2 [864 kB] 2021-06-03T19:02:54.2837396Z Fetched 5546 kB in 0s (50.7 MB/s) 2021-06-03T19:02:54.3191812Z Selecting previously unselected package libdcmtk14. 2021-06-03T19:02:54.3267250Z (Reading database ... 2021-06-03T19:02:54.3272174Z (Reading database ... 5% 2021-06-03T19:02:54.3272772Z (Reading database ... 10% 2021-06-03T19:02:54.3273266Z (Reading database ... 15% 2021-06-03T19:02:54.3273775Z (Reading database ... 20% 2021-06-03T19:02:54.3274302Z (Reading database ... 25% 2021-06-03T19:02:54.3274789Z (Reading database ... 30% 2021-06-03T19:02:54.3275368Z (Reading database ... 35% 2021-06-03T19:02:54.3275912Z (Reading database ... 40% 2021-06-03T19:02:54.3276393Z (Reading database ... 45% 2021-06-03T19:02:54.3276937Z (Reading database ... 50% 2021-06-03T19:02:54.3353909Z (Reading database ... 55% 2021-06-03T19:02:54.3410312Z (Reading database ... 60% 2021-06-03T19:02:54.3443347Z (Reading database ... 65% 2021-06-03T19:02:54.3501026Z (Reading database ... 70% 2021-06-03T19:02:54.3529715Z (Reading database ... 75% 2021-06-03T19:02:54.3556891Z (Reading database ... 80% 2021-06-03T19:02:54.3928742Z (Reading database ... 85% 2021-06-03T19:02:54.4003455Z (Reading database ... 90% 2021-06-03T19:02:54.4319870Z (Reading database ... 95% 2021-06-03T19:02:54.4320876Z (Reading database ... 100% 2021-06-03T19:02:54.4321945Z (Reading database ... 240894 files and directories currently installed.) 2021-06-03T19:02:54.4428437Z Preparing to unpack .../libdcmtk14_3.6.4-2.1build2_amd64.deb ... 2021-06-03T19:02:54.4461430Z Unpacking libdcmtk14 (3.6.4-2.1build2) ... 2021-06-03T19:02:55.0589311Z Selecting previously unselected package dcmtk. 2021-06-03T19:02:55.0776126Z Preparing to unpack .../dcmtk_3.6.4-2.1build2_amd64.deb ... 2021-06-03T19:02:55.0845267Z Unpacking dcmtk (3.6.4-2.1build2) ... 2021-06-03T19:02:55.2320909Z Setting up libdcmtk14 (3.6.4-2.1build2) ... 2021-06-03T19:02:55.2360171Z Setting up dcmtk (3.6.4-2.1build2) ... 2021-06-03T19:02:55.2520181Z Adding `dcmtk' group to system ... 2021-06-03T19:02:55.4071134Z Adding `dcmtk' user to system ... 2021-06-03T19:02:55.6601950Z adduser: Warning: The home directory `/var/lib/dcmtk/db' does not belong to the user you are currently creating. 2021-06-03T19:02:55.9692763Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:02:57.7082923Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:02:59.7517393Z Reading package lists... 2021-06-03T19:02:59.8989374Z Building dependency tree... 2021-06-03T19:02:59.9007585Z Reading state information... 2021-06-03T19:03:00.1509122Z libsecret-1-dev is already the newest version (0.20.3-0ubuntu1). 2021-06-03T19:03:00.1510178Z 0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:03:00.2248733Z Reading package lists... 2021-06-03T19:03:00.3883456Z Building dependency tree... 2021-06-03T19:03:00.3904260Z Reading state information... 2021-06-03T19:03:00.6520703Z libpng-dev is already the newest version (1.6.37-2). 2021-06-03T19:03:00.6524599Z libpng-dev set to manually installed. 2021-06-03T19:03:00.6525672Z 0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:03:00.7302766Z Reading package lists... 2021-06-03T19:03:00.8941094Z Building dependency tree... 2021-06-03T19:03:00.8961654Z Reading state information... 2021-06-03T19:03:01.0585568Z The following additional packages will be installed: 2021-06-03T19:03:01.0588380Z libopenjp2-7 libpoppler-cpp0v5 libpoppler-dev libpoppler97 poppler-data 2021-06-03T19:03:01.0594828Z Suggested packages: 2021-06-03T19:03:01.0596411Z poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho 2021-06-03T19:03:01.0598262Z fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai 2021-06-03T19:03:01.0599546Z fonts-arphic-uming fonts-nanum 2021-06-03T19:03:01.1107459Z The following NEW packages will be installed: 2021-06-03T19:03:01.1110439Z libopenjp2-7 libpoppler-cpp-dev libpoppler-cpp0v5 libpoppler-dev 2021-06-03T19:03:01.1113209Z libpoppler97 poppler-data 2021-06-03T19:03:01.1347612Z 0 upgraded, 6 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:03:01.1349483Z Need to get 2582 kB of archives. 2021-06-03T19:03:01.1351482Z After this operation, 16.7 MB of additional disk space will be used. 2021-06-03T19:03:01.1353640Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 poppler-data all 0.4.9-2 [1475 kB] 2021-06-03T19:03:01.1680646Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopenjp2-7 amd64 2.3.1-1ubuntu4.20.04.1 [141 kB] 2021-06-03T19:03:01.1714205Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler97 amd64 0.86.1-0ubuntu1 [915 kB] 2021-06-03T19:03:01.1875782Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp0v5 amd64 0.86.1-0ubuntu1 [35.6 kB] 2021-06-03T19:03:01.1890342Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-dev amd64 0.86.1-0ubuntu1 [5336 B] 2021-06-03T19:03:01.1904433Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp-dev amd64 0.86.1-0ubuntu1 [10.4 kB] 2021-06-03T19:03:01.6502547Z Fetched 2582 kB in 0s (34.9 MB/s) 2021-06-03T19:03:01.6848086Z Selecting previously unselected package poppler-data. 2021-06-03T19:03:01.6924641Z (Reading database ... 2021-06-03T19:03:01.6925553Z (Reading database ... 5% 2021-06-03T19:03:01.6926339Z (Reading database ... 10% 2021-06-03T19:03:01.6927080Z (Reading database ... 15% 2021-06-03T19:03:01.6927822Z (Reading database ... 20% 2021-06-03T19:03:01.6928764Z (Reading database ... 25% 2021-06-03T19:03:01.6929576Z (Reading database ... 30% 2021-06-03T19:03:01.6930337Z (Reading database ... 35% 2021-06-03T19:03:01.6931074Z (Reading database ... 40% 2021-06-03T19:03:01.6931828Z (Reading database ... 45% 2021-06-03T19:03:01.6932572Z (Reading database ... 50% 2021-06-03T19:03:01.7015489Z (Reading database ... 55% 2021-06-03T19:03:01.7066417Z (Reading database ... 60% 2021-06-03T19:03:01.7105323Z (Reading database ... 65% 2021-06-03T19:03:01.7172351Z (Reading database ... 70% 2021-06-03T19:03:01.7201363Z (Reading database ... 75% 2021-06-03T19:03:01.7230811Z (Reading database ... 80% 2021-06-03T19:03:01.7596929Z (Reading database ... 85% 2021-06-03T19:03:01.7669482Z (Reading database ... 90% 2021-06-03T19:03:01.8023813Z (Reading database ... 95% 2021-06-03T19:03:01.8024725Z (Reading database ... 100% 2021-06-03T19:03:01.8025888Z (Reading database ... 241129 files and directories currently installed.) 2021-06-03T19:03:01.8152441Z Preparing to unpack .../0-poppler-data_0.4.9-2_all.deb ... 2021-06-03T19:03:01.8168452Z Unpacking poppler-data (0.4.9-2) ... 2021-06-03T19:03:02.1830041Z Selecting previously unselected package libopenjp2-7:amd64. 2021-06-03T19:03:02.2038418Z Preparing to unpack .../1-libopenjp2-7_2.3.1-1ubuntu4.20.04.1_amd64.deb ... 2021-06-03T19:03:02.2061819Z Unpacking libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-06-03T19:03:02.2509431Z Selecting previously unselected package libpoppler97:amd64. 2021-06-03T19:03:02.2746030Z Preparing to unpack .../2-libpoppler97_0.86.1-0ubuntu1_amd64.deb ... 2021-06-03T19:03:02.2762568Z Unpacking libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-06-03T19:03:02.4030539Z Selecting previously unselected package libpoppler-cpp0v5:amd64. 2021-06-03T19:03:02.4231859Z Preparing to unpack .../3-libpoppler-cpp0v5_0.86.1-0ubuntu1_amd64.deb ... 2021-06-03T19:03:02.4344358Z Unpacking libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-06-03T19:03:02.4710859Z Selecting previously unselected package libpoppler-dev:amd64. 2021-06-03T19:03:02.4936664Z Preparing to unpack .../4-libpoppler-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-06-03T19:03:02.4955415Z Unpacking libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-06-03T19:03:02.5230017Z Selecting previously unselected package libpoppler-cpp-dev:amd64. 2021-06-03T19:03:02.5504767Z Preparing to unpack .../5-libpoppler-cpp-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-06-03T19:03:02.5520602Z Unpacking libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-06-03T19:03:02.6204146Z Setting up poppler-data (0.4.9-2) ... 2021-06-03T19:03:02.6309790Z Setting up libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-06-03T19:03:02.6345570Z Setting up libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-06-03T19:03:02.6387579Z Setting up libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-06-03T19:03:02.6431875Z Setting up libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-06-03T19:03:02.6472676Z Setting up libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-06-03T19:03:02.6519472Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-06-03T19:03:03.0960767Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:03:05.0851549Z Reading package lists... 2021-06-03T19:03:05.2427604Z Building dependency tree... 2021-06-03T19:03:05.2446870Z Reading state information... 2021-06-03T19:03:05.4282035Z The following additional packages will be installed: 2021-06-03T19:03:05.4298814Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libsz2 2021-06-03T19:03:05.4307360Z Suggested packages: 2021-06-03T19:03:05.4308781Z libhdf5-doc 2021-06-03T19:03:05.4844894Z The following NEW packages will be installed: 2021-06-03T19:03:05.4850162Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libhdf5-dev 2021-06-03T19:03:05.4854649Z libsz2 2021-06-03T19:03:05.5359656Z 0 upgraded, 7 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:03:05.5361110Z Need to get 4074 kB of archives. 2021-06-03T19:03:05.5362063Z After this operation, 17.6 MB of additional disk space will be used. 2021-06-03T19:03:05.5366161Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 hdf5-helpers amd64 1.10.4+repack-11ubuntu1 [13.6 kB] 2021-06-03T19:03:05.5397583Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec0 amd64 1.0.4-1 [19.1 kB] 2021-06-03T19:03:05.5408197Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsz2 amd64 1.0.4-1 [5188 B] 2021-06-03T19:03:05.5417828Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-103 amd64 1.10.4+repack-11ubuntu1 [1311 kB] 2021-06-03T19:03:05.5695327Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-cpp-103 amd64 1.10.4+repack-11ubuntu1 [120 kB] 2021-06-03T19:03:05.5715020Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec-dev amd64 1.0.4-1 [16.9 kB] 2021-06-03T19:03:05.5724260Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-dev amd64 1.10.4+repack-11ubuntu1 [2589 kB] 2021-06-03T19:03:06.0805460Z Fetched 4074 kB in 0s (29.8 MB/s) 2021-06-03T19:03:06.1122575Z Selecting previously unselected package hdf5-helpers. 2021-06-03T19:03:06.1200405Z (Reading database ... 2021-06-03T19:03:06.1201690Z (Reading database ... 5% 2021-06-03T19:03:06.1202378Z (Reading database ... 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2021-06-03T19:03:06.2259963Z (Reading database ... 241689 files and directories currently installed.) 2021-06-03T19:03:06.2377619Z Preparing to unpack .../0-hdf5-helpers_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-06-03T19:03:06.2398259Z Unpacking hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-06-03T19:03:06.2749504Z Selecting previously unselected package libaec0:amd64. 2021-06-03T19:03:06.2948999Z Preparing to unpack .../1-libaec0_1.0.4-1_amd64.deb ... 2021-06-03T19:03:06.2974088Z Unpacking libaec0:amd64 (1.0.4-1) ... 2021-06-03T19:03:06.3270444Z Selecting previously unselected package libsz2:amd64. 2021-06-03T19:03:06.3542557Z Preparing to unpack .../2-libsz2_1.0.4-1_amd64.deb ... 2021-06-03T19:03:06.3558360Z Unpacking libsz2:amd64 (1.0.4-1) ... 2021-06-03T19:03:06.3910471Z Selecting previously unselected package libhdf5-103:amd64. 2021-06-03T19:03:06.4124072Z Preparing to unpack .../3-libhdf5-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-06-03T19:03:06.4144552Z Unpacking libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-06-03T19:03:06.5709306Z Selecting previously unselected package libhdf5-cpp-103:amd64. 2021-06-03T19:03:06.5987682Z Preparing to unpack .../4-libhdf5-cpp-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-06-03T19:03:06.6009314Z Unpacking libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-06-03T19:03:06.6431428Z Selecting previously unselected package libaec-dev:amd64. 2021-06-03T19:03:06.6671430Z Preparing to unpack .../5-libaec-dev_1.0.4-1_amd64.deb ... 2021-06-03T19:03:06.6683744Z Unpacking libaec-dev:amd64 (1.0.4-1) ... 2021-06-03T19:03:06.7030182Z Selecting previously unselected package libhdf5-dev. 2021-06-03T19:03:06.7265675Z Preparing to unpack .../6-libhdf5-dev_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-06-03T19:03:06.7279111Z Unpacking libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-06-03T19:03:07.0779664Z Setting up hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-06-03T19:03:07.0833252Z Setting up libaec0:amd64 (1.0.4-1) ... 2021-06-03T19:03:07.0873698Z Setting up libsz2:amd64 (1.0.4-1) ... 2021-06-03T19:03:07.0908903Z Setting up libaec-dev:amd64 (1.0.4-1) ... 2021-06-03T19:03:07.0944121Z Setting up libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-06-03T19:03:07.0981995Z Setting up libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-06-03T19:03:07.1019721Z Setting up libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-06-03T19:03:07.1106056Z update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 2021-06-03T19:03:07.1139161Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:03:07.9106612Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:03:09.9112059Z Reading package lists... 2021-06-03T19:03:10.0665011Z Building dependency tree... 2021-06-03T19:03:10.0689182Z Reading state information... 2021-06-03T19:03:10.2285041Z The following additional packages will be installed: 2021-06-03T19:03:10.2288189Z libdrm-dev libgl-dev libglu1-mesa libglx-dev 2021-06-03T19:03:10.2829371Z The following NEW packages will be installed: 2021-06-03T19:03:10.2835102Z libdrm-dev libgl-dev libglu1-mesa libglu1-mesa-dev libglx-dev 2021-06-03T19:03:10.2839729Z mesa-common-dev 2021-06-03T19:03:10.3054267Z 0 upgraded, 6 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:03:10.3055025Z Need to get 1761 kB of archives. 2021-06-03T19:03:10.3055844Z After this operation, 5442 kB of additional disk space will be used. 2021-06-03T19:03:10.3057863Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libdrm-dev amd64 2.4.102-1ubuntu1~20.04.1 [126 kB] 2021-06-03T19:03:10.3105296Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libglx-dev amd64 1.3.2-1~ubuntu0.20.04.1 [14.0 kB] 2021-06-03T19:03:10.3111167Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [97.8 kB] 2021-06-03T19:03:10.3129463Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa amd64 9.0.1-1build1 [168 kB] 2021-06-03T19:03:10.3160901Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa-dev amd64 9.0.1-1build1 [207 kB] 2021-06-03T19:03:10.3200283Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-common-dev amd64 20.2.6-0ubuntu0.20.04.1 [1148 kB] 2021-06-03T19:03:10.7776914Z Fetched 1761 kB in 0s (36.9 MB/s) 2021-06-03T19:03:10.8109207Z Selecting previously unselected package libdrm-dev:amd64. 2021-06-03T19:03:10.8184931Z (Reading database ... 2021-06-03T19:03:10.8185479Z (Reading database ... 5% 2021-06-03T19:03:10.8185974Z (Reading database ... 10% 2021-06-03T19:03:10.8186482Z (Reading database ... 15% 2021-06-03T19:03:10.8186973Z (Reading database ... 20% 2021-06-03T19:03:10.8187479Z (Reading database ... 25% 2021-06-03T19:03:10.8188515Z (Reading database ... 30% 2021-06-03T19:03:10.8189061Z (Reading 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(2.4.102-1ubuntu1~20.04.1) ... 2021-06-03T19:03:10.9816468Z Selecting previously unselected package libglx-dev:amd64. 2021-06-03T19:03:11.0093035Z Preparing to unpack .../1-libglx-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-06-03T19:03:11.0105513Z Unpacking libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-06-03T19:03:11.0670487Z Selecting previously unselected package libgl-dev:amd64. 2021-06-03T19:03:11.0898734Z Preparing to unpack .../2-libgl-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-06-03T19:03:11.0911133Z Unpacking libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-06-03T19:03:11.1310994Z Selecting previously unselected package libglu1-mesa:amd64. 2021-06-03T19:03:11.1575838Z Preparing to unpack .../3-libglu1-mesa_9.0.1-1build1_amd64.deb ... 2021-06-03T19:03:11.1600749Z Unpacking libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-06-03T19:03:11.2018487Z Selecting previously unselected package libglu1-mesa-dev:amd64. 2021-06-03T19:03:11.2286385Z Preparing to unpack .../4-libglu1-mesa-dev_9.0.1-1build1_amd64.deb ... 2021-06-03T19:03:11.2297889Z Unpacking libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-06-03T19:03:11.2778384Z Selecting previously unselected package mesa-common-dev:amd64. 2021-06-03T19:03:11.3046158Z Preparing to unpack .../5-mesa-common-dev_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-06-03T19:03:11.3057900Z Unpacking mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-06-03T19:03:11.4881918Z Setting up libdrm-dev:amd64 (2.4.102-1ubuntu1~20.04.1) ... 2021-06-03T19:03:11.4925240Z Setting up libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-06-03T19:03:11.4964399Z Setting up libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-06-03T19:03:11.5007894Z Setting up libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-06-03T19:03:11.5050081Z Setting up libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-06-03T19:03:11.5096231Z Setting up mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-06-03T19:03:11.5140993Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:03:13.0356269Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:03:15.0285537Z Reading package lists... 2021-06-03T19:03:15.1751606Z Building dependency tree... 2021-06-03T19:03:15.1771377Z Reading state information... 2021-06-03T19:03:15.3376021Z The following additional packages will be installed: 2021-06-03T19:03:15.3378687Z libprotobuf-lite17 libprotoc17 2021-06-03T19:03:15.3966433Z The following NEW packages will be installed: 2021-06-03T19:03:15.3971175Z libprotobuf-dev libprotobuf-lite17 libprotoc-dev libprotoc17 2021-06-03T19:03:15.3974609Z protobuf-compiler 2021-06-03T19:03:15.4203533Z 0 upgraded, 5 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:03:15.4204601Z Need to get 2754 kB of archives. 2021-06-03T19:03:15.4205429Z After this operation, 19.9 MB of additional disk space will be used. 2021-06-03T19:03:15.4207353Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-lite17 amd64 3.6.1.3-2ubuntu5 [132 kB] 2021-06-03T19:03:15.4254054Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc17 amd64 3.6.1.3-2ubuntu5 [646 kB] 2021-06-03T19:03:15.4357195Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-dev amd64 3.6.1.3-2ubuntu5 [1155 kB] 2021-06-03T19:03:15.4523835Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc-dev amd64 3.6.1.3-2ubuntu5 [793 kB] 2021-06-03T19:03:15.4641647Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 protobuf-compiler amd64 3.6.1.3-2ubuntu5 [27.6 kB] 2021-06-03T19:03:15.9312373Z Fetched 2754 kB in 0s (44.6 MB/s) 2021-06-03T19:03:15.9657868Z Selecting previously unselected package libprotobuf-lite17:amd64. 2021-06-03T19:03:15.9736121Z (Reading database ... 2021-06-03T19:03:15.9736911Z (Reading database ... 5% 2021-06-03T19:03:15.9738406Z (Reading database ... 10% 2021-06-03T19:03:15.9738991Z (Reading database ... 15% 2021-06-03T19:03:15.9739519Z (Reading database ... 20% 2021-06-03T19:03:15.9740062Z (Reading database ... 25% 2021-06-03T19:03:15.9740791Z (Reading database ... 30% 2021-06-03T19:03:15.9741641Z (Reading database ... 35% 2021-06-03T19:03:15.9742200Z (Reading database ... 40% 2021-06-03T19:03:15.9742739Z (Reading database ... 45% 2021-06-03T19:03:15.9743266Z (Reading database ... 50% 2021-06-03T19:03:15.9844873Z (Reading database ... 55% 2021-06-03T19:03:15.9896153Z (Reading database ... 60% 2021-06-03T19:03:15.9932157Z (Reading database ... 65% 2021-06-03T19:03:15.9993950Z (Reading database ... 70% 2021-06-03T19:03:16.0025794Z (Reading database ... 75% 2021-06-03T19:03:16.0055424Z (Reading database ... 80% 2021-06-03T19:03:16.0447805Z (Reading database ... 85% 2021-06-03T19:03:16.0522899Z (Reading database ... 90% 2021-06-03T19:03:16.0864105Z (Reading database ... 95% 2021-06-03T19:03:16.0864723Z (Reading database ... 100% 2021-06-03T19:03:16.0865474Z (Reading database ... 242380 files and directories currently installed.) 2021-06-03T19:03:16.0994587Z Preparing to unpack .../libprotobuf-lite17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-06-03T19:03:16.1022203Z Unpacking libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-06-03T19:03:16.1590210Z Selecting previously unselected package libprotoc17:amd64. 2021-06-03T19:03:16.1867335Z Preparing to unpack .../libprotoc17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-06-03T19:03:16.1885265Z Unpacking libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-06-03T19:03:16.2860523Z Selecting previously unselected package libprotobuf-dev:amd64. 2021-06-03T19:03:16.3125768Z Preparing to unpack .../libprotobuf-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-06-03T19:03:16.3135541Z Unpacking libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-06-03T19:03:16.4870549Z Selecting previously unselected package libprotoc-dev:amd64. 2021-06-03T19:03:16.5107028Z Preparing to unpack .../libprotoc-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-06-03T19:03:16.5119273Z Unpacking libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-06-03T19:03:16.6310945Z Selecting previously unselected package protobuf-compiler. 2021-06-03T19:03:16.6550788Z Preparing to unpack .../protobuf-compiler_3.6.1.3-2ubuntu5_amd64.deb ... 2021-06-03T19:03:16.6560574Z Unpacking protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-06-03T19:03:16.7194958Z Setting up libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-06-03T19:03:16.7233305Z Setting up protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-06-03T19:03:16.7278945Z Setting up libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-06-03T19:03:16.7314655Z Setting up libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-06-03T19:03:16.7351677Z Setting up libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-06-03T19:03:16.7391061Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:03:17.4900464Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:03:19.4667285Z Reading package lists... 2021-06-03T19:03:19.6173718Z Building dependency tree... 2021-06-03T19:03:19.6195024Z Reading state information... 2021-06-03T19:03:19.7828209Z The following additional packages will be installed: 2021-06-03T19:03:19.7831533Z i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 libasyncns0 2021-06-03T19:03:19.7835419Z libavc1394-0 libavcodec58 libavdevice58 libavfilter7 libavformat58 2021-06-03T19:03:19.7838685Z libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 libcaca0 2021-06-03T19:03:19.7840181Z libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 libcodec2-0.9 2021-06-03T19:03:19.7841433Z libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 libigdgmm11 2021-06-03T19:03:19.7843147Z libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-06-03T19:03:19.7844669Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-06-03T19:03:19.7845940Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-06-03T19:03:19.7847152Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-06-03T19:03:19.7848354Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-06-03T19:03:19.7849894Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-06-03T19:03:19.7851112Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-06-03T19:03:19.7852236Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-06-03T19:03:19.7853337Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-06-03T19:03:19.7854280Z Suggested packages: 2021-06-03T19:03:19.7855522Z ffmpeg-doc i965-va-driver-shaders libbluray-bdj jackd2 libportaudio2 2021-06-03T19:03:19.7857182Z opus-tools pulseaudio libraw1394-doc serdi sndiod sordi speex opencl-icd 2021-06-03T19:03:19.7859453Z libvdpau-va-gl1 nvidia-vdpau-driver nvidia-legacy-340xx-vdpau-driver 2021-06-03T19:03:19.7860685Z nvidia-legacy-304xx-vdpau-driver 2021-06-03T19:03:19.8675451Z The following NEW packages will be installed: 2021-06-03T19:03:19.8677613Z ffmpeg i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 2021-06-03T19:03:19.8679290Z libasyncns0 libavc1394-0 libavcodec58 libavdevice58 libavfilter7 2021-06-03T19:03:19.8680711Z libavformat58 libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 2021-06-03T19:03:19.8682472Z libcaca0 libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 2021-06-03T19:03:19.8684127Z libcodec2-0.9 libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 2021-06-03T19:03:19.8685730Z libigdgmm11 libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-06-03T19:03:19.8687336Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-06-03T19:03:19.8689549Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-06-03T19:03:19.8691453Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-06-03T19:03:19.8693201Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-06-03T19:03:19.8694872Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-06-03T19:03:19.8697164Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-06-03T19:03:19.8698374Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-06-03T19:03:19.8699554Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-06-03T19:03:19.8982100Z 0 upgraded, 76 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:03:19.8982888Z Need to get 47.1 MB of archives. 2021-06-03T19:03:19.8984081Z After this operation, 195 MB of additional disk space will be used. 2021-06-03T19:03:19.8986490Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaom0 amd64 1.0.0.errata1-3build1 [1160 kB] 2021-06-03T19:03:19.9271639Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva2 amd64 2.7.0-2 [53.5 kB] 2021-06-03T19:03:19.9283648Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-drm2 amd64 2.7.0-2 [7044 B] 2021-06-03T19:03:19.9293235Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-x11-2 amd64 2.7.0-2 [11.9 kB] 2021-06-03T19:03:19.9298020Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvdpau1 amd64 1.3-1ubuntu2 [25.6 kB] 2021-06-03T19:03:19.9309722Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1ubuntu1 [30.3 kB] 2021-06-03T19:03:19.9318449Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavutil56 amd64 7:4.2.4-1ubuntu0.1 [241 kB] 2021-06-03T19:03:19.9364118Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcodec2-0.9 amd64 0.9.2-2 [7886 kB] 2021-06-03T19:03:20.5437752Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgsm1 amd64 1.0.18-2 [24.4 kB] 2021-06-03T19:03:20.5441276Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmp3lame0 amd64 3.100-3 [133 kB] 2021-06-03T19:03:20.5443864Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libopus0 amd64 1.3.1-0ubuntu1 [191 kB] 2021-06-03T19:03:20.5445914Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libshine3 amd64 3.1.1-2 [23.2 kB] 2021-06-03T19:03:20.5448570Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsnappy1v5 amd64 1.1.8-1build1 [16.7 kB] 2021-06-03T19:03:20.5451051Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libspeex1 amd64 1.2~rc1.2-1.1ubuntu1 [53.2 kB] 2021-06-03T19:03:20.5453188Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsoxr0 amd64 0.1.3-2build1 [78.0 kB] 2021-06-03T19:03:20.5455363Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswresample3 amd64 7:4.2.4-1ubuntu0.1 [57.1 kB] 2021-06-03T19:03:20.5457526Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtheora0 amd64 1.1.1+dfsg.1-15ubuntu2 [162 kB] 2021-06-03T19:03:20.5459296Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtwolame0 amd64 0.4.0-2 [47.6 kB] 2021-06-03T19:03:20.5461295Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvorbisenc2 amd64 1.3.6-2ubuntu1 [70.7 kB] 2021-06-03T19:03:20.5463253Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwavpack1 amd64 5.2.0-1ubuntu0.1 [77.3 kB] 2021-06-03T19:03:20.5466622Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx264-155 amd64 2:0.155.2917+git0a84d98-2 [521 kB] 2021-06-03T19:03:20.5468813Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx265-179 amd64 3.2.1-1build1 [1060 kB] 2021-06-03T19:03:20.5470735Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxvidcore4 amd64 2:1.3.7-1 [201 kB] 2021-06-03T19:03:20.5472597Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi-common all 0.2.35-17 [32.5 kB] 2021-06-03T19:03:20.5474391Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi0 amd64 0.2.35-17 [237 kB] 2021-06-03T19:03:20.5476378Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavcodec58 amd64 7:4.2.4-1ubuntu0.1 [4876 kB] 2021-06-03T19:03:20.5478294Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libraw1394-11 amd64 2.1.2-1 [30.7 kB] 2021-06-03T19:03:20.5480048Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavc1394-0 amd64 0.5.4-5 [16.2 kB] 2021-06-03T19:03:20.5481819Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libass9 amd64 1:0.14.0-2 [88.0 kB] 2021-06-03T19:03:20.5483606Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbluray2 amd64 1:1.2.0-1 [138 kB] 2021-06-03T19:03:20.5485493Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libchromaprint1 amd64 1.4.3-3build1 [37.6 kB] 2021-06-03T19:03:20.5487372Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgme0 amd64 0.6.2-1build1 [123 kB] 2021-06-03T19:03:20.5489285Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmpg123-0 amd64 1.25.13-1 [124 kB] 2021-06-03T19:03:20.5491327Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenmpt0 amd64 0.4.11-1build1 [599 kB] 2021-06-03T19:03:20.5493335Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-gcrypt-4 amd64 0.9.3-2ubuntu2.1 [201 kB] 2021-06-03T19:03:20.5495368Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavformat58 amd64 7:4.2.4-1ubuntu0.1 [981 kB] 2021-06-03T19:03:20.5497665Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbs2b0 amd64 3.1.0+dfsg-2.2build1 [10.2 kB] 2021-06-03T19:03:20.5499506Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libflite1 amd64 2.1-release-3 [12.8 MB] 2021-06-03T19:03:20.5501295Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libserd-0-0 amd64 0.30.2-1 [46.6 kB] 2021-06-03T19:03:20.5503040Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsord-0-0 amd64 0.16.4-1 [19.5 kB] 2021-06-03T19:03:20.5505418Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsratom-0-0 amd64 0.6.4-1 [16.9 kB] 2021-06-03T19:03:20.5507523Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 liblilv-0-0 amd64 0.24.6-1ubuntu0.1 [40.6 kB] 2021-06-03T19:03:20.5509703Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmysofa1 amd64 1.0~dfsg0-1 [39.2 kB] 2021-06-03T19:03:20.5511717Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libpostproc55 amd64 7:4.2.4-1ubuntu0.1 [55.3 kB] 2021-06-03T19:03:20.5513594Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsamplerate0 amd64 0.1.9-2 [939 kB] 2021-06-03T19:03:20.5515413Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 librubberband2 amd64 1.8.2-1build1 [89.4 kB] 2021-06-03T19:03:20.5517380Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswscale5 amd64 7:4.2.4-1ubuntu0.1 [156 kB] 2021-06-03T19:03:20.5519260Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libvidstab1.1 amd64 1.1.0-2 [35.0 kB] 2021-06-03T19:03:20.5521172Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavfilter7 amd64 7:4.2.4-1ubuntu0.1 [1084 kB] 2021-06-03T19:03:20.5523240Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcaca0 amd64 0.99.beta19-2.1ubuntu1.20.04.1 [202 kB] 2021-06-03T19:03:20.6014051Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio18 amd64 2.0.0-2 [58.6 kB] 2021-06-03T19:03:20.6023322Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-cdda2 amd64 10.2+2.0.0-1 [17.6 kB] 2021-06-03T19:03:20.6032698Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-paranoia2 amd64 10.2+2.0.0-1 [16.2 kB] 2021-06-03T19:03:20.6035095Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdc1394-22 amd64 2.2.5-2.1 [79.6 kB] 2021-06-03T19:03:20.6044964Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libiec61883-0 amd64 1.2.0-3 [24.3 kB] 2021-06-03T19:03:20.6053829Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjack-jackd2-0 amd64 1.9.12~dfsg-2ubuntu2 [267 kB] 2021-06-03T19:03:20.6112349Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal-data all 1:1.19.1-1 [162 kB] 2021-06-03T19:03:20.6139983Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsndio7.0 amd64 1.5.0-3 [24.5 kB] 2021-06-03T19:03:20.6152841Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal1 amd64 1:1.19.1-1 [492 kB] 2021-06-03T19:03:20.6255401Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasyncns0 amd64 0.8-6 [12.1 kB] 2021-06-03T19:03:20.6262737Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libflac8 amd64 1.3.3-1build1 [103 kB] 2021-06-03T19:03:20.6289131Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsndfile1 amd64 1.0.28-7 [170 kB] 2021-06-03T19:03:20.6318197Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libpulse0 amd64 1:13.99.1-1ubuntu3.10 [262 kB] 2021-06-03T19:03:20.6358315Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsdl2-2.0-0 amd64 2.0.10+dfsg1-3 [407 kB] 2021-06-03T19:03:20.6452439Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavdevice58 amd64 7:4.2.4-1ubuntu0.1 [74.3 kB] 2021-06-03T19:03:20.6467286Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavresample4 amd64 7:4.2.4-1ubuntu0.1 [54.2 kB] 2021-06-03T19:03:20.6480746Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 ffmpeg amd64 7:4.2.4-1ubuntu0.1 [1453 kB] 2021-06-03T19:03:20.6747136Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libigdgmm11 amd64 20.1.1+ds1-1 [111 kB] 2021-06-03T19:03:20.6761465Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 intel-media-va-driver amd64 20.1.1+dfsg1-1 [1764 kB] 2021-06-03T19:03:20.7038778Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaacs0 amd64 0.9.0-2 [50.1 kB] 2021-06-03T19:03:20.7047611Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbdplus0 amd64 0.1.2-3 [47.3 kB] 2021-06-03T19:03:20.7058741Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 mesa-va-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2618 kB] 2021-06-03T19:03:20.7472776Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-vdpau-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2744 kB] 2021-06-03T19:03:20.7864046Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 i965-va-driver amd64 2.4.0-0ubuntu1 [924 kB] 2021-06-03T19:03:20.8022380Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 va-driver-all amd64 2.7.0-2 [4020 B] 2021-06-03T19:03:20.8029400Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 vdpau-driver-all amd64 1.3-1ubuntu2 [4596 B] 2021-06-03T19:03:21.4468817Z Fetched 47.1 MB in 1s (50.8 MB/s) 2021-06-03T19:03:21.4836568Z Selecting previously unselected package libaom0:amd64. 2021-06-03T19:03:21.4925006Z (Reading database ... 2021-06-03T19:03:21.4925602Z (Reading database ... 5% 2021-06-03T19:03:21.4926514Z (Reading database ... 10% 2021-06-03T19:03:21.4927032Z (Reading database ... 15% 2021-06-03T19:03:21.4927590Z (Reading database ... 20% 2021-06-03T19:03:21.4928117Z (Reading database ... 25% 2021-06-03T19:03:21.4928621Z (Reading database ... 30% 2021-06-03T19:03:21.4929139Z (Reading database ... 35% 2021-06-03T19:03:21.4929662Z (Reading database ... 40% 2021-06-03T19:03:21.4930752Z (Reading database ... 45% 2021-06-03T19:03:21.4931485Z (Reading database ... 50% 2021-06-03T19:03:21.5034077Z (Reading database ... 55% 2021-06-03T19:03:21.5084207Z (Reading database ... 60% 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package libbs2b0:amd64. 2021-06-03T19:03:25.6446247Z Preparing to unpack .../36-libbs2b0_3.1.0+dfsg-2.2build1_amd64.deb ... 2021-06-03T19:03:25.6464574Z Unpacking libbs2b0:amd64 (3.1.0+dfsg-2.2build1) ... 2021-06-03T19:03:25.6869525Z Selecting previously unselected package libflite1:amd64. 2021-06-03T19:03:25.7102299Z Preparing to unpack .../37-libflite1_2.1-release-3_amd64.deb ... 2021-06-03T19:03:25.7119363Z Unpacking libflite1:amd64 (2.1-release-3) ... 2021-06-03T19:03:26.8923740Z Selecting previously unselected package libserd-0-0:amd64. 2021-06-03T19:03:26.9195306Z Preparing to unpack .../38-libserd-0-0_0.30.2-1_amd64.deb ... 2021-06-03T19:03:26.9207994Z Unpacking libserd-0-0:amd64 (0.30.2-1) ... 2021-06-03T19:03:26.9527510Z Selecting previously unselected package libsord-0-0:amd64. 2021-06-03T19:03:26.9788560Z Preparing to unpack .../39-libsord-0-0_0.16.4-1_amd64.deb ... 2021-06-03T19:03:26.9800563Z Unpacking libsord-0-0:amd64 (0.16.4-1) ... 2021-06-03T19:03:27.0062895Z Selecting previously unselected package libsratom-0-0:amd64. 2021-06-03T19:03:27.0315749Z Preparing to unpack .../40-libsratom-0-0_0.6.4-1_amd64.deb ... 2021-06-03T19:03:27.0331086Z Unpacking libsratom-0-0:amd64 (0.6.4-1) ... 2021-06-03T19:03:27.0630212Z Selecting previously unselected package liblilv-0-0:amd64. 2021-06-03T19:03:27.0888892Z Preparing to unpack .../41-liblilv-0-0_0.24.6-1ubuntu0.1_amd64.deb ... 2021-06-03T19:03:27.0905296Z Unpacking liblilv-0-0:amd64 (0.24.6-1ubuntu0.1) ... 2021-06-03T19:03:27.1191633Z Selecting previously unselected package libmysofa1:amd64. 2021-06-03T19:03:27.1482682Z Preparing to unpack .../42-libmysofa1_1.0~dfsg0-1_amd64.deb ... 2021-06-03T19:03:27.1493373Z Unpacking libmysofa1:amd64 (1.0~dfsg0-1) ... 2021-06-03T19:03:27.1779031Z Selecting previously unselected package libpostproc55:amd64. 2021-06-03T19:03:27.2007732Z Preparing to unpack .../43-libpostproc55_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-06-03T19:03:27.2023908Z Unpacking libpostproc55:amd64 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(2.7.0-2) ... 2021-06-03T19:03:30.8571320Z Setting up libpostproc55:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-06-03T19:03:30.8608979Z Setting up librubberband2:amd64 (1.8.2-1build1) ... 2021-06-03T19:03:30.8651831Z Setting up libjack-jackd2-0:amd64 (1.9.12~dfsg-2ubuntu2) ... 2021-06-03T19:03:30.8705119Z Setting up vdpau-driver-all:amd64 (1.3-1ubuntu2) ... 2021-06-03T19:03:30.8773244Z Setting up libsord-0-0:amd64 (0.16.4-1) ... 2021-06-03T19:03:30.8812221Z Setting up libsratom-0-0:amd64 (0.6.4-1) ... 2021-06-03T19:03:30.8858056Z Setting up libswscale5:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-06-03T19:03:30.8899159Z Setting up libsndfile1:amd64 (1.0.28-7) ... 2021-06-03T19:03:30.8942013Z Setting up liblilv-0-0:amd64 (0.24.6-1ubuntu0.1) ... 2021-06-03T19:03:30.8986191Z Setting up libpulse0:amd64 (1:13.99.1-1ubuntu3.10) ... 2021-06-03T19:03:30.9102360Z Setting up libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-06-03T19:03:30.9151828Z Setting up libavresample4:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-06-03T19:03:30.9187158Z Setting up libavcodec58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-06-03T19:03:30.9222510Z Setting up libsdl2-2.0-0:amd64 (2.0.10+dfsg1-3) ... 2021-06-03T19:03:30.9269821Z Setting up libchromaprint1:amd64 (1.4.3-3build1) ... 2021-06-03T19:03:30.9315198Z Setting up libavformat58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-06-03T19:03:30.9354102Z Setting up libavfilter7:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-06-03T19:03:30.9392293Z Setting up libavdevice58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-06-03T19:03:30.9429709Z Setting up ffmpeg (7:4.2.4-1ubuntu0.1) ... 2021-06-03T19:03:30.9549827Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:03:32.0499774Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:03:34.0620295Z Reading package lists... 2021-06-03T19:03:34.2274846Z Building dependency tree... 2021-06-03T19:03:34.2299396Z Reading state information... 2021-06-03T19:03:34.3959899Z The following additional packages will be installed: 2021-06-03T19:03:34.3968856Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-06-03T19:03:34.4532982Z The following NEW packages will be installed: 2021-06-03T19:03:34.4534459Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-06-03T19:03:34.4540397Z libmagick++-dev 2021-06-03T19:03:34.4765931Z 0 upgraded, 4 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:03:34.4766614Z Need to get 309 kB of archives. 2021-06-03T19:03:34.4767511Z After this operation, 2202 kB of additional disk space will be used. 2021-06-03T19:03:34.4769903Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6-headers all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [47.5 kB] 2021-06-03T19:03:34.4800783Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-8 amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [133 kB] 2021-06-03T19:03:34.4838483Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-dev amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [127 kB] 2021-06-03T19:03:34.4859865Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-dev all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [1404 B] 2021-06-03T19:03:34.9366055Z Fetched 309 kB in 0s (11.5 MB/s) 2021-06-03T19:03:34.9725203Z Selecting previously unselected package libmagick++-6-headers. 2021-06-03T19:03:34.9807565Z (Reading database ... 2021-06-03T19:03:34.9808592Z (Reading database ... 5% 2021-06-03T19:03:34.9809399Z (Reading database ... 10% 2021-06-03T19:03:34.9810173Z (Reading database ... 15% 2021-06-03T19:03:34.9810903Z (Reading database ... 20% 2021-06-03T19:03:34.9811721Z (Reading database ... 25% 2021-06-03T19:03:34.9812694Z (Reading database ... 30% 2021-06-03T19:03:34.9813401Z (Reading database ... 35% 2021-06-03T19:03:34.9814122Z (Reading database ... 40% 2021-06-03T19:03:34.9814846Z (Reading database ... 45% 2021-06-03T19:03:34.9815549Z (Reading database ... 50% 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Preparing to unpack .../libmagick++-6.q16-8_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-06-03T19:03:35.2193992Z Unpacking libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-06-03T19:03:35.2630775Z Selecting previously unselected package libmagick++-6.q16-dev:amd64. 2021-06-03T19:03:35.2845989Z Preparing to unpack .../libmagick++-6.q16-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-06-03T19:03:35.2861746Z Unpacking libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-06-03T19:03:35.3389757Z Selecting previously unselected package libmagick++-dev. 2021-06-03T19:03:35.3594122Z Preparing to unpack .../libmagick++-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_all.deb ... 2021-06-03T19:03:35.3679630Z Unpacking libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-06-03T19:03:35.4259988Z Setting up libmagick++-6-headers (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-06-03T19:03:35.4371522Z Setting up libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-06-03T19:03:35.4410599Z Setting up libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-06-03T19:03:35.4447064Z Setting up libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-06-03T19:03:35.4543014Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:03:37.4135242Z Reading package lists... 2021-06-03T19:03:37.5851190Z Building dependency tree... 2021-06-03T19:03:37.5871413Z Reading state information... 2021-06-03T19:03:37.7585055Z imagemagick is already the newest version (8:6.9.10.23+dfsg-2.1ubuntu11.2). 2021-06-03T19:03:37.7586774Z The following additional packages will be installed: 2021-06-03T19:03:37.7588788Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 libgs9 libgs9-common 2021-06-03T19:03:37.7590107Z libijs-0.35 libjbig2dec0 2021-06-03T19:03:37.7593849Z Suggested packages: 2021-06-03T19:03:37.7595500Z fonts-noto fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre 2021-06-03T19:03:37.7596793Z ghostscript-x 2021-06-03T19:03:37.8133686Z The following NEW packages will be installed: 2021-06-03T19:03:37.8136173Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 ghostscript libgs9 2021-06-03T19:03:37.8138299Z libgs9-common libijs-0.35 libjbig2dec0 2021-06-03T19:03:37.8350405Z 0 upgraded, 8 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:03:38.5479538Z Need to get 11.2 MB of archives. 2021-06-03T19:03:38.5481374Z After this operation, 39.1 MB of additional disk space will be used. 2021-06-03T19:03:38.5485105Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-droid-fallback all 1:6.0.1r16-1.1 [1805 kB] 2021-06-03T19:03:38.5489123Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 fonts-noto-mono all 20200323-1build1~ubuntu20.04.1 [80.6 kB] 2021-06-03T19:03:38.5492394Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-urw-base35 all 20170801.1-3 [6333 kB] 2021-06-03T19:03:38.5494588Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9-common all 9.50~dfsg-5ubuntu4.2 [681 kB] 2021-06-03T19:03:38.5499399Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libijs-0.35 amd64 0.35-15 [15.7 kB] 2021-06-03T19:03:38.5502050Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjbig2dec0 amd64 0.18-1ubuntu1 [60.0 kB] 2021-06-03T19:03:38.5504447Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9 amd64 9.50~dfsg-5ubuntu4.2 [2172 kB] 2021-06-03T19:03:38.5506626Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 ghostscript amd64 9.50~dfsg-5ubuntu4.2 [51.6 kB] 2021-06-03T19:03:38.5507692Z Fetched 11.2 MB in 0s (64.1 MB/s) 2021-06-03T19:03:38.5509946Z Selecting previously unselected package fonts-droid-fallback. 2021-06-03T19:03:38.5510720Z (Reading database ... 2021-06-03T19:03:38.5511216Z (Reading database ... 5% 2021-06-03T19:03:38.5511730Z (Reading 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... 100% 2021-06-03T19:03:38.5846653Z (Reading database ... 243137 files and directories currently installed.) 2021-06-03T19:03:38.5955019Z Preparing to unpack .../0-fonts-droid-fallback_1%3a6.0.1r16-1.1_all.deb ... 2021-06-03T19:03:38.6218245Z Unpacking fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-06-03T19:03:38.8429504Z Selecting previously unselected package fonts-noto-mono. 2021-06-03T19:03:38.8720655Z Preparing to unpack .../1-fonts-noto-mono_20200323-1build1~ubuntu20.04.1_all.deb ... 2021-06-03T19:03:38.8732474Z Unpacking fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-06-03T19:03:38.9149829Z Selecting previously unselected package fonts-urw-base35. 2021-06-03T19:03:38.9364776Z Preparing to unpack .../2-fonts-urw-base35_20170801.1-3_all.deb ... 2021-06-03T19:03:39.0093215Z Unpacking fonts-urw-base35 (20170801.1-3) ... 2021-06-03T19:03:39.4350069Z Selecting previously unselected package libgs9-common. 2021-06-03T19:03:39.4546394Z Preparing to unpack .../3-libgs9-common_9.50~dfsg-5ubuntu4.2_all.deb ... 2021-06-03T19:03:39.4557823Z Unpacking libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-06-03T19:03:39.5740530Z Selecting previously unselected package libijs-0.35:amd64. 2021-06-03T19:03:39.6020553Z Preparing to unpack .../4-libijs-0.35_0.35-15_amd64.deb ... 2021-06-03T19:03:39.6043335Z Unpacking libijs-0.35:amd64 (0.35-15) ... 2021-06-03T19:03:39.6349751Z Selecting previously unselected package libjbig2dec0:amd64. 2021-06-03T19:03:39.6558956Z Preparing to unpack .../5-libjbig2dec0_0.18-1ubuntu1_amd64.deb ... 2021-06-03T19:03:39.6571544Z Unpacking libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-06-03T19:03:39.6949504Z Selecting previously unselected package libgs9:amd64. 2021-06-03T19:03:39.7186153Z Preparing to unpack .../6-libgs9_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-06-03T19:03:39.7198359Z Unpacking libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-06-03T19:03:40.0223091Z Selecting previously unselected package ghostscript. 2021-06-03T19:03:40.0456862Z Preparing to unpack .../7-ghostscript_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-06-03T19:03:40.0466614Z Unpacking ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-06-03T19:03:40.1239657Z Setting up fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-06-03T19:03:40.1290868Z Setting up libijs-0.35:amd64 (0.35-15) ... 2021-06-03T19:03:40.1329898Z Setting up fonts-urw-base35 (20170801.1-3) ... 2021-06-03T19:03:40.2003248Z Setting up libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-06-03T19:03:40.2038772Z Setting up fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-06-03T19:03:40.2310311Z Setting up libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-06-03T19:03:40.2345247Z Setting up libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-06-03T19:03:40.2382575Z Setting up ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-06-03T19:03:40.2522737Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-06-03T19:03:40.3982399Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:03:40.4208552Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:03:43.4599861Z Reading package lists... 2021-06-03T19:03:43.6182509Z Building dependency tree... 2021-06-03T19:03:43.6206561Z Reading state information... 2021-06-03T19:03:43.7799921Z The following additional packages will be installed: 2021-06-03T19:03:43.7802219Z libudunits2-0 libudunits2-data 2021-06-03T19:03:43.8332479Z The following NEW packages will be installed: 2021-06-03T19:03:43.8335135Z libudunits2-0 libudunits2-data libudunits2-dev 2021-06-03T19:03:43.8535485Z 0 upgraded, 3 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:03:43.8536267Z Need to get 429 kB of archives. 2021-06-03T19:03:43.8537237Z After this operation, 1026 kB of additional disk space will be used. 2021-06-03T19:03:43.8539009Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-data all 2.2.26-5 [18.8 kB] 2021-06-03T19:03:43.8601426Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-0 amd64 2.2.26-5 [48.9 kB] 2021-06-03T19:03:43.8617259Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-dev amd64 2.2.26-5 [362 kB] 2021-06-03T19:03:44.3090988Z Fetched 429 kB in 0s (14.3 MB/s) 2021-06-03T19:03:44.3402147Z Selecting previously unselected package libudunits2-data. 2021-06-03T19:03:44.3482192Z (Reading database ... 2021-06-03T19:03:44.3483612Z (Reading database ... 5% 2021-06-03T19:03:44.3484436Z (Reading database ... 10% 2021-06-03T19:03:44.3485269Z (Reading database ... 15% 2021-06-03T19:03:44.3486172Z (Reading database ... 20% 2021-06-03T19:03:44.3487124Z (Reading database ... 25% 2021-06-03T19:03:44.3487647Z (Reading database ... 30% 2021-06-03T19:03:44.3488176Z (Reading database ... 35% 2021-06-03T19:03:44.3489072Z (Reading database ... 40% 2021-06-03T19:03:44.3489788Z (Reading database ... 45% 2021-06-03T19:03:44.3490308Z (Reading database ... 50% 2021-06-03T19:03:44.3581347Z (Reading database ... 55% 2021-06-03T19:03:44.3629842Z (Reading database ... 60% 2021-06-03T19:03:44.3694314Z (Reading database ... 65% 2021-06-03T19:03:44.3726308Z (Reading database ... 70% 2021-06-03T19:03:44.3753189Z (Reading database ... 75% 2021-06-03T19:03:44.3787101Z (Reading database ... 80% 2021-06-03T19:03:44.4106910Z (Reading database ... 85% 2021-06-03T19:03:44.4205327Z (Reading database ... 90% 2021-06-03T19:03:44.4554891Z (Reading database ... 95% 2021-06-03T19:03:44.4555898Z (Reading database ... 100% 2021-06-03T19:03:44.4556974Z (Reading database ... 243701 files and directories currently installed.) 2021-06-03T19:03:44.4671062Z Preparing to unpack .../libudunits2-data_2.2.26-5_all.deb ... 2021-06-03T19:03:44.4687305Z Unpacking libudunits2-data (2.2.26-5) ... 2021-06-03T19:03:44.5070195Z Selecting previously unselected package libudunits2-0:amd64. 2021-06-03T19:03:44.5251726Z Preparing to unpack .../libudunits2-0_2.2.26-5_amd64.deb ... 2021-06-03T19:03:44.5280152Z Unpacking libudunits2-0:amd64 (2.2.26-5) ... 2021-06-03T19:03:44.5630373Z Selecting previously unselected package libudunits2-dev:amd64. 2021-06-03T19:03:44.5871313Z Preparing to unpack .../libudunits2-dev_2.2.26-5_amd64.deb ... 2021-06-03T19:03:44.5885826Z Unpacking libudunits2-dev:amd64 (2.2.26-5) ... 2021-06-03T19:03:44.6785057Z Setting up libudunits2-data (2.2.26-5) ... 2021-06-03T19:03:44.6826721Z Setting up libudunits2-0:amd64 (2.2.26-5) ... 2021-06-03T19:03:44.6864103Z Setting up libudunits2-dev:amd64 (2.2.26-5) ... 2021-06-03T19:03:44.6904397Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-06-03T19:03:44.8172434Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:03:46.8294378Z Reading package lists... 2021-06-03T19:03:47.0018839Z Building dependency tree... 2021-06-03T19:03:47.0041111Z Reading state information... 2021-06-03T19:03:47.2246309Z The following NEW packages will be installed: 2021-06-03T19:03:47.2254478Z libjq-dev 2021-06-03T19:03:47.2457886Z 0 upgraded, 1 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:03:47.2459227Z Need to get 11.2 kB of archives. 2021-06-03T19:03:47.2460469Z After this operation, 47.1 kB of additional disk space will be used. 2021-06-03T19:03:47.2462569Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libjq-dev amd64 1.6-1ubuntu0.20.04.1 [11.2 kB] 2021-06-03T19:03:47.7106769Z Fetched 11.2 kB in 0s (696 kB/s) 2021-06-03T19:03:47.7430315Z Selecting previously unselected package libjq-dev:amd64. 2021-06-03T19:03:47.7499118Z (Reading database ... 2021-06-03T19:03:47.7499658Z (Reading database ... 5% 2021-06-03T19:03:47.7500359Z (Reading database ... 10% 2021-06-03T19:03:47.7500810Z (Reading database ... 15% 2021-06-03T19:03:47.7501268Z (Reading database ... 20% 2021-06-03T19:03:47.7501709Z (Reading database ... 25% 2021-06-03T19:03:47.7502171Z (Reading database ... 30% 2021-06-03T19:03:47.7502626Z (Reading database ... 35% 2021-06-03T19:03:47.7503082Z (Reading database ... 40% 2021-06-03T19:03:47.7503543Z (Reading database ... 45% 2021-06-03T19:03:47.7503984Z (Reading database ... 50% 2021-06-03T19:03:47.7612864Z (Reading database ... 55% 2021-06-03T19:03:47.7671314Z (Reading database ... 60% 2021-06-03T19:03:47.7743196Z (Reading database ... 65% 2021-06-03T19:03:47.7778264Z (Reading database ... 70% 2021-06-03T19:03:47.7810575Z (Reading database ... 75% 2021-06-03T19:03:47.7847047Z (Reading database ... 80% 2021-06-03T19:03:47.8181873Z (Reading database ... 85% 2021-06-03T19:03:47.8284009Z (Reading database ... 90% 2021-06-03T19:03:47.8600467Z (Reading database ... 95% 2021-06-03T19:03:47.8601353Z (Reading database ... 100% 2021-06-03T19:03:47.8602313Z (Reading database ... 243730 files and directories currently installed.) 2021-06-03T19:03:47.8725790Z Preparing to unpack .../libjq-dev_1.6-1ubuntu0.20.04.1_amd64.deb ... 2021-06-03T19:03:47.8742535Z Unpacking libjq-dev:amd64 (1.6-1ubuntu0.20.04.1) ... 2021-06-03T19:03:47.9330660Z Setting up libjq-dev:amd64 (1.6-1ubuntu0.20.04.1) ... 2021-06-03T19:03:49.8974683Z Reading package lists... 2021-06-03T19:03:50.0734176Z Building dependency tree... 2021-06-03T19:03:50.0753711Z Reading state information... 2021-06-03T19:03:50.2867276Z The following NEW packages will be installed: 2021-06-03T19:03:50.2870562Z libmng2 2021-06-03T19:03:50.3144981Z 0 upgraded, 1 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:03:50.3145750Z Need to get 168 kB of archives. 2021-06-03T19:03:50.3146528Z After this operation, 571 kB of additional disk space will be used. 2021-06-03T19:03:50.3148945Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmng2 amd64 2.0.3+dfsg-3 [168 kB] 2021-06-03T19:03:50.7650781Z Fetched 168 kB in 0s (6316 kB/s) 2021-06-03T19:03:50.8023078Z Selecting previously unselected package libmng2:amd64. 2021-06-03T19:03:50.8106629Z (Reading database ... 2021-06-03T19:03:50.8107648Z (Reading database ... 5% 2021-06-03T19:03:50.8111143Z (Reading database ... 10% 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2021-06-03T19:03:51.5519288Z (Reading database ... 243736 files and directories currently installed.) 2021-06-03T19:03:51.5521966Z Preparing to unpack .../libmng2_2.0.3+dfsg-3_amd64.deb ... 2021-06-03T19:03:51.5523189Z Unpacking libmng2:amd64 (2.0.3+dfsg-3) ... 2021-06-03T19:03:51.5524159Z Setting up libmng2:amd64 (2.0.3+dfsg-3) ... 2021-06-03T19:03:51.5525614Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:03:52.9363017Z Reading package lists... 2021-06-03T19:03:53.1070340Z Building dependency tree... 2021-06-03T19:03:53.1092753Z Reading state information... 2021-06-03T19:03:53.2400629Z E: Unable to locate package libmng1 2021-06-03T19:03:53.3197742Z Reading package lists... 2021-06-03T19:03:53.4941086Z Building dependency tree... 2021-06-03T19:03:53.4965180Z Reading state information... 2021-06-03T19:03:53.6451984Z E: Unable to locate package libapparmor-devel 2021-06-03T19:03:53.7122912Z Reading package lists... 2021-06-03T19:03:53.8668380Z Building dependency tree... 2021-06-03T19:03:53.8691756Z Reading state information... 2021-06-03T19:03:54.0325190Z The following additional packages will be installed: 2021-06-03T19:03:54.0330894Z libij-java 2021-06-03T19:03:54.0879035Z The following NEW packages will be installed: 2021-06-03T19:03:54.0882752Z imagej libij-java 2021-06-03T19:03:54.1396054Z 0 upgraded, 2 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:03:54.1397896Z Need to get 2328 kB of archives. 2021-06-03T19:03:54.1399148Z After this operation, 2498 kB of additional disk space will be used. 2021-06-03T19:03:54.1401388Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libij-java all 1.52r-1 [2284 kB] 2021-06-03T19:03:54.1736376Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 imagej all 1.52r-1 [43.7 kB] 2021-06-03T19:03:54.6519242Z Fetched 2328 kB in 0s (28.9 MB/s) 2021-06-03T19:03:54.6873091Z Selecting previously unselected package libij-java. 2021-06-03T19:03:54.6955802Z (Reading 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90% 2021-06-03T19:03:54.8064335Z (Reading database ... 95% 2021-06-03T19:03:54.8064943Z (Reading database ... 100% 2021-06-03T19:03:54.8065704Z (Reading database ... 243742 files and directories currently installed.) 2021-06-03T19:03:54.8164475Z Preparing to unpack .../libij-java_1.52r-1_all.deb ... 2021-06-03T19:03:54.8181510Z Unpacking libij-java (1.52r-1) ... 2021-06-03T19:03:54.9430209Z Selecting previously unselected package imagej. 2021-06-03T19:03:54.9672348Z Preparing to unpack .../imagej_1.52r-1_all.deb ... 2021-06-03T19:03:54.9687636Z Unpacking imagej (1.52r-1) ... 2021-06-03T19:03:55.0511019Z Setting up libij-java (1.52r-1) ... 2021-06-03T19:03:55.0599274Z Setting up imagej (1.52r-1) ... 2021-06-03T19:03:55.0640346Z Processing triggers for hicolor-icon-theme (0.17-2) ... 2021-06-03T19:03:56.7574063Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:03:57.4971342Z Processing triggers for mime-support (3.64ubuntu1) ... 2021-06-03T19:03:59.5570053Z Reading package lists... 2021-06-03T19:03:59.7109730Z Building dependency tree... 2021-06-03T19:03:59.7132894Z Reading state information... 2021-06-03T19:03:59.8657146Z Suggested packages: 2021-06-03T19:03:59.8658713Z bowtie2-examples 2021-06-03T19:03:59.9203876Z The following NEW packages will be installed: 2021-06-03T19:03:59.9212070Z bowtie2 2021-06-03T19:03:59.9408437Z 0 upgraded, 1 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:03:59.9409784Z Need to get 1324 kB of archives. 2021-06-03T19:03:59.9411763Z After this operation, 5630 kB of additional disk space will be used. 2021-06-03T19:03:59.9414519Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 bowtie2 amd64 2.3.5.1-6build1 [1324 kB] 2021-06-03T19:04:00.4495515Z Fetched 1324 kB in 0s (23.6 MB/s) 2021-06-03T19:04:00.4817489Z Selecting previously unselected package bowtie2. 2021-06-03T19:04:00.4901185Z (Reading database ... 2021-06-03T19:04:00.4902490Z (Reading database ... 5% 2021-06-03T19:04:00.4903472Z (Reading database ... 10% 2021-06-03T19:04:00.4904276Z (Reading database ... 15% 2021-06-03T19:04:00.4905417Z (Reading database ... 20% 2021-06-03T19:04:00.4906160Z (Reading database ... 25% 2021-06-03T19:04:00.4906904Z (Reading database ... 30% 2021-06-03T19:04:00.4907643Z (Reading database ... 35% 2021-06-03T19:04:00.4910599Z (Reading database ... 40% 2021-06-03T19:04:00.4911115Z (Reading database ... 45% 2021-06-03T19:04:00.4911599Z (Reading database ... 50% 2021-06-03T19:04:00.4997493Z (Reading database ... 55% 2021-06-03T19:04:00.5044614Z (Reading database ... 60% 2021-06-03T19:04:00.5106788Z (Reading database ... 65% 2021-06-03T19:04:00.5137149Z (Reading database ... 70% 2021-06-03T19:04:00.5172508Z (Reading database ... 75% 2021-06-03T19:04:00.5202208Z (Reading database ... 80% 2021-06-03T19:04:00.5524902Z (Reading database ... 85% 2021-06-03T19:04:00.5623575Z (Reading database ... 90% 2021-06-03T19:04:00.5976989Z (Reading database ... 95% 2021-06-03T19:04:00.5977619Z (Reading database ... 100% 2021-06-03T19:04:00.5978443Z (Reading database ... 243765 files and directories currently installed.) 2021-06-03T19:04:00.6115858Z Preparing to unpack .../bowtie2_2.3.5.1-6build1_amd64.deb ... 2021-06-03T19:04:00.6128724Z Unpacking bowtie2 (2.3.5.1-6build1) ... 2021-06-03T19:04:00.8249871Z Setting up bowtie2 (2.3.5.1-6build1) ... 2021-06-03T19:04:00.8299577Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:04:03.7098652Z Reading package lists... 2021-06-03T19:04:03.8632322Z Building dependency tree... 2021-06-03T19:04:03.8654046Z Reading state information... 2021-06-03T19:04:03.9954140Z E: Unable to locate package install 2021-06-03T19:04:03.9955244Z E: Unable to locate package gdal 2021-06-03T19:04:04.0674094Z Reading package lists... 2021-06-03T19:04:04.2310506Z Building dependency tree... 2021-06-03T19:04:04.2331096Z Reading state information... 2021-06-03T19:04:04.2574768Z Package insighttoolkit4-python is not available, but is referred to by another package. 2021-06-03T19:04:04.2576363Z This may mean that the package is missing, has been obsoleted, or 2021-06-03T19:04:04.2577375Z is only available from another source 2021-06-03T19:04:04.2577995Z 2021-06-03T19:04:04.3809877Z E: Package 'insighttoolkit4-python' has no installation candidate 2021-06-03T19:04:04.4532500Z Reading package lists... 2021-06-03T19:04:04.6028692Z Building dependency tree... 2021-06-03T19:04:04.6050157Z Reading state information... 2021-06-03T19:04:04.6286908Z Package libav-tools is not available, but is referred to by another package. 2021-06-03T19:04:04.6289266Z This may mean that the package is missing, has been obsoleted, or 2021-06-03T19:04:04.6290716Z is only available from another source 2021-06-03T19:04:04.6291510Z However the following packages replace it: 2021-06-03T19:04:04.6292108Z ffmpeg 2021-06-03T19:04:04.6292461Z 2021-06-03T19:04:04.7366694Z E: Package 'libav-tools' has no installation candidate 2021-06-03T19:04:04.8064036Z Reading package lists... 2021-06-03T19:04:04.9625920Z Building dependency tree... 2021-06-03T19:04:04.9647766Z Reading state information... 2021-06-03T19:04:05.1200905Z The following additional packages will be installed: 2021-06-03T19:04:05.1205018Z libgcrypt20-dev libgit2-28 libgpg-error-dev libhttp-parser-dev 2021-06-03T19:04:05.1206496Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-06-03T19:04:05.1208777Z libssh2-1-dev 2021-06-03T19:04:05.1209310Z Suggested packages: 2021-06-03T19:04:05.1210108Z libgcrypt20-doc libmbedtls-doc 2021-06-03T19:04:05.1729479Z The following NEW packages will be installed: 2021-06-03T19:04:05.1731878Z libgcrypt20-dev libgit2-28 libgit2-dev libgpg-error-dev libhttp-parser-dev 2021-06-03T19:04:05.1734165Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-06-03T19:04:05.1736522Z libssh2-1-dev 2021-06-03T19:04:05.1936856Z 0 upgraded, 11 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:04:05.1937824Z Need to get 2667 kB of archives. 2021-06-03T19:04:05.1938745Z After this operation, 11.2 MB of additional disk space will be used. 2021-06-03T19:04:05.1941516Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgpg-error-dev amd64 1.37-1 [109 kB] 2021-06-03T19:04:05.1975096Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcrypt20-dev amd64 1.8.5-5ubuntu1 [470 kB] 2021-06-03T19:04:05.2051756Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser2.9 amd64 2.9.2-2 [21.8 kB] 2021-06-03T19:04:05.2059776Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedcrypto3 amd64 2.16.4-1ubuntu2 [150 kB] 2021-06-03T19:04:05.2096086Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedx509-0 amd64 2.16.4-1ubuntu2 [42.3 kB] 2021-06-03T19:04:05.2103421Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls12 amd64 2.16.4-1ubuntu2 [71.8 kB] 2021-06-03T19:04:05.2125719Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-28 amd64 0.28.4+dfsg.1-2 [403 kB] 2021-06-03T19:04:05.2202295Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls-dev amd64 2.16.4-1ubuntu2 [444 kB] 2021-06-03T19:04:05.2307616Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libssh2-1-dev amd64 1.8.0-2.1build1 [244 kB] 2021-06-03T19:04:05.2341867Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser-dev amd64 2.9.2-2 [20.2 kB] 2021-06-03T19:04:05.2353736Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-dev amd64 0.28.4+dfsg.1-2 [691 kB] 2021-06-03T19:04:05.7521655Z Fetched 2667 kB in 0s (38.6 MB/s) 2021-06-03T19:04:05.7860897Z Selecting previously unselected package libgpg-error-dev. 2021-06-03T19:04:05.7939736Z (Reading database ... 2021-06-03T19:04:05.7940490Z (Reading database ... 5% 2021-06-03T19:04:05.7941119Z (Reading database 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2021-06-03T19:04:05.9036138Z (Reading database ... 243791 files and directories currently installed.) 2021-06-03T19:04:05.9158405Z Preparing to unpack .../00-libgpg-error-dev_1.37-1_amd64.deb ... 2021-06-03T19:04:05.9173809Z Unpacking libgpg-error-dev (1.37-1) ... 2021-06-03T19:04:05.9631161Z Selecting previously unselected package libgcrypt20-dev. 2021-06-03T19:04:05.9848256Z Preparing to unpack .../01-libgcrypt20-dev_1.8.5-5ubuntu1_amd64.deb ... 2021-06-03T19:04:05.9865563Z Unpacking libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-06-03T19:04:06.0672223Z Selecting previously unselected package libhttp-parser2.9:amd64. 2021-06-03T19:04:06.0915920Z Preparing to unpack .../02-libhttp-parser2.9_2.9.2-2_amd64.deb ... 2021-06-03T19:04:06.0942777Z Unpacking libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-06-03T19:04:06.1219447Z Selecting previously unselected package libmbedcrypto3:amd64. 2021-06-03T19:04:06.1467222Z Preparing to unpack .../03-libmbedcrypto3_2.16.4-1ubuntu2_amd64.deb ... 2021-06-03T19:04:06.1494298Z Unpacking libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-06-03T19:04:06.1949825Z Selecting previously unselected package libmbedx509-0:amd64. 2021-06-03T19:04:06.2178630Z Preparing to unpack .../04-libmbedx509-0_2.16.4-1ubuntu2_amd64.deb ... 2021-06-03T19:04:06.2191938Z Unpacking libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-06-03T19:04:06.2589937Z Selecting previously unselected package libmbedtls12:amd64. 2021-06-03T19:04:06.2777342Z Preparing to unpack .../05-libmbedtls12_2.16.4-1ubuntu2_amd64.deb ... 2021-06-03T19:04:06.2792663Z Unpacking libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-06-03T19:04:06.3165013Z Selecting previously unselected package libgit2-28:amd64. 2021-06-03T19:04:06.3364428Z Preparing to unpack .../06-libgit2-28_0.28.4+dfsg.1-2_amd64.deb ... 2021-06-03T19:04:06.3377930Z Unpacking libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-06-03T19:04:06.4070326Z Selecting previously unselected package libmbedtls-dev:amd64. 2021-06-03T19:04:06.4261415Z Preparing to unpack .../07-libmbedtls-dev_2.16.4-1ubuntu2_amd64.deb ... 2021-06-03T19:04:07.0553005Z Unpacking libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-06-03T19:04:07.0559557Z Selecting previously unselected package libssh2-1-dev:amd64. 2021-06-03T19:04:07.0561207Z Preparing to unpack .../08-libssh2-1-dev_1.8.0-2.1build1_amd64.deb ... 2021-06-03T19:04:07.0562602Z Unpacking libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-06-03T19:04:07.0563945Z Selecting previously unselected package libhttp-parser-dev. 2021-06-03T19:04:07.0565302Z Preparing to unpack .../09-libhttp-parser-dev_2.9.2-2_amd64.deb ... 2021-06-03T19:04:07.0566654Z Unpacking libhttp-parser-dev (2.9.2-2) ... 2021-06-03T19:04:07.0567836Z Selecting previously unselected package libgit2-dev:amd64. 2021-06-03T19:04:07.0569060Z Preparing to unpack .../10-libgit2-dev_0.28.4+dfsg.1-2_amd64.deb ... 2021-06-03T19:04:07.0570136Z Unpacking libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-06-03T19:04:07.0571141Z Setting up libgpg-error-dev (1.37-1) ... 2021-06-03T19:04:07.0583452Z Setting up libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-06-03T19:04:07.0584969Z Setting up libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-06-03T19:04:07.0586226Z Setting up libhttp-parser-dev (2.9.2-2) ... 2021-06-03T19:04:07.0587445Z Setting up libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-06-03T19:04:07.0588981Z Setting up libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-06-03T19:04:07.0590255Z Setting up libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-06-03T19:04:07.0591653Z Setting up libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-06-03T19:04:07.0593116Z Setting up libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-06-03T19:04:07.0594464Z Setting up libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-06-03T19:04:07.0595441Z Setting up libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-06-03T19:04:07.0596417Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:04:12.0687176Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-06-03T19:04:12.1980209Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:04:14.2226266Z Reading package lists... 2021-06-03T19:04:14.3945343Z Building dependency tree... 2021-06-03T19:04:14.3970711Z Reading state information... 2021-06-03T19:04:14.6722500Z libtiff-dev is already the newest version (4.1.0+git191117-2ubuntu0.20.04.1). 2021-06-03T19:04:14.6724173Z libtiff-dev set to manually installed. 2021-06-03T19:04:14.6725065Z 0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:04:14.7474879Z Reading package lists... 2021-06-03T19:04:14.9194956Z Building dependency tree... 2021-06-03T19:04:14.9216880Z Reading state information... 2021-06-03T19:04:15.1702979Z unixodbc-dev is already the newest version (2.3.7). 2021-06-03T19:04:15.1704008Z 0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:04:15.2461614Z Reading package lists... 2021-06-03T19:04:15.4070692Z Building dependency tree... 2021-06-03T19:04:15.4091199Z Reading state information... 2021-06-03T19:04:15.6367037Z The following NEW packages will be installed: 2021-06-03T19:04:15.6371829Z libsodium-dev 2021-06-03T19:04:15.6602823Z 0 upgraded, 1 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:04:15.6603779Z Need to get 169 kB of archives. 2021-06-03T19:04:15.6608287Z After this operation, 826 kB of additional disk space will be used. 2021-06-03T19:04:15.6610506Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsodium-dev amd64 1.0.18-1 [169 kB] 2021-06-03T19:04:16.1783129Z Fetched 169 kB in 0s (5169 kB/s) 2021-06-03T19:04:16.2121364Z Selecting previously unselected package libsodium-dev:amd64. 2021-06-03T19:04:16.2205113Z (Reading database ... 2021-06-03T19:04:16.2206028Z (Reading database ... 5% 2021-06-03T19:04:16.2206792Z (Reading database ... 10% 2021-06-03T19:04:16.2207544Z (Reading database ... 15% 2021-06-03T19:04:16.2208383Z (Reading database ... 20% 2021-06-03T19:04:16.2209190Z (Reading database ... 25% 2021-06-03T19:04:16.2209939Z (Reading database ... 30% 2021-06-03T19:04:16.2210665Z (Reading database ... 35% 2021-06-03T19:04:16.2211402Z (Reading database ... 40% 2021-06-03T19:04:16.2212178Z (Reading database ... 45% 2021-06-03T19:04:16.2212897Z (Reading database ... 50% 2021-06-03T19:04:16.2316075Z (Reading database ... 55% 2021-06-03T19:04:16.2356904Z (Reading database ... 60% 2021-06-03T19:04:16.2462831Z (Reading database ... 65% 2021-06-03T19:04:16.2493367Z (Reading database ... 70% 2021-06-03T19:04:16.2529422Z (Reading database ... 75% 2021-06-03T19:04:16.2564019Z (Reading database ... 80% 2021-06-03T19:04:16.2914163Z (Reading database ... 85% 2021-06-03T19:04:16.3027859Z (Reading database ... 90% 2021-06-03T19:04:16.3352717Z (Reading database ... 95% 2021-06-03T19:04:16.3353258Z (Reading database ... 100% 2021-06-03T19:04:16.3354052Z (Reading database ... 244294 files and directories currently installed.) 2021-06-03T19:04:16.3475153Z Preparing to unpack .../libsodium-dev_1.0.18-1_amd64.deb ... 2021-06-03T19:04:16.3487250Z Unpacking libsodium-dev:amd64 (1.0.18-1) ... 2021-06-03T19:04:16.4305890Z Setting up libsodium-dev:amd64 (1.0.18-1) ... 2021-06-03T19:04:18.4118779Z Reading package lists... 2021-06-03T19:04:18.5841919Z Building dependency tree... 2021-06-03T19:04:18.5873039Z Reading state information... 2021-06-03T19:04:18.7486477Z The following additional packages will be installed: 2021-06-03T19:04:18.7492233Z libarchive-dev liblept5 libtesseract4 tesseract-ocr tesseract-ocr-osd 2021-06-03T19:04:18.8100132Z The following NEW packages will be installed: 2021-06-03T19:04:18.8105686Z libarchive-dev liblept5 libleptonica-dev libtesseract-dev libtesseract4 2021-06-03T19:04:18.8110057Z tesseract-ocr tesseract-ocr-eng tesseract-ocr-osd 2021-06-03T19:04:18.8322799Z 0 upgraded, 8 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:04:18.8323603Z Need to get 10.4 MB of archives. 2021-06-03T19:04:18.8324447Z After this operation, 38.0 MB of additional disk space will be used. 2021-06-03T19:04:18.8327350Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-dev amd64 3.4.0-2ubuntu1 [490 kB] 2021-06-03T19:04:18.8412367Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblept5 amd64 1.79.0-1 [999 kB] 2021-06-03T19:04:18.8549927Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libleptonica-dev amd64 1.79.0-1 [1389 kB] 2021-06-03T19:04:18.8742932Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract4 amd64 4.1.1-2build2 [1237 kB] 2021-06-03T19:04:18.8898881Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract-dev amd64 4.1.1-2build2 [1463 kB] 2021-06-03T19:04:18.9093641Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-eng all 1:4.00~git30-7274cfa-1 [1598 kB] 2021-06-03T19:04:18.9494498Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-osd all 1:4.00~git30-7274cfa-1 [2990 kB] 2021-06-03T19:04:19.0045138Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr amd64 4.1.1-2build2 [262 kB] 2021-06-03T19:04:19.4942008Z Fetched 10.4 MB in 0s (54.3 MB/s) 2021-06-03T19:04:19.5320546Z Selecting previously unselected package libarchive-dev:amd64. 2021-06-03T19:04:19.5412628Z (Reading database ... 2021-06-03T19:04:19.5413510Z (Reading database ... 5% 2021-06-03T19:04:19.5414585Z (Reading database ... 10% 2021-06-03T19:04:19.5415438Z (Reading database ... 15% 2021-06-03T19:04:19.5416808Z (Reading database ... 20% 2021-06-03T19:04:19.5417379Z (Reading database ... 25% 2021-06-03T19:04:19.5417926Z (Reading database ... 30% 2021-06-03T19:04:19.5418451Z (Reading database ... 35% 2021-06-03T19:04:19.5419137Z (Reading database ... 40% 2021-06-03T19:04:19.5419643Z (Reading database ... 45% 2021-06-03T19:04:19.5420458Z (Reading database ... 50% 2021-06-03T19:04:19.5523525Z (Reading database ... 55% 2021-06-03T19:04:19.5564549Z (Reading database ... 60% 2021-06-03T19:04:19.5630510Z (Reading database ... 65% 2021-06-03T19:04:19.5662302Z (Reading database ... 70% 2021-06-03T19:04:19.5691551Z (Reading database ... 75% 2021-06-03T19:04:19.5723959Z (Reading database ... 80% 2021-06-03T19:04:19.6103946Z (Reading database ... 85% 2021-06-03T19:04:19.6214002Z (Reading database ... 90% 2021-06-03T19:04:19.6564631Z (Reading database ... 95% 2021-06-03T19:04:19.6565251Z (Reading database ... 100% 2021-06-03T19:04:19.6566179Z (Reading database ... 244364 files and directories currently installed.) 2021-06-03T19:04:19.6711536Z Preparing to unpack .../0-libarchive-dev_3.4.0-2ubuntu1_amd64.deb ... 2021-06-03T19:04:19.6746571Z Unpacking libarchive-dev:amd64 (3.4.0-2ubuntu1) ... 2021-06-03T19:04:19.7550166Z Selecting previously unselected package liblept5:amd64. 2021-06-03T19:04:19.7802874Z Preparing to unpack .../1-liblept5_1.79.0-1_amd64.deb ... 2021-06-03T19:04:19.7831799Z Unpacking liblept5:amd64 (1.79.0-1) ... 2021-06-03T19:04:19.9151437Z Selecting previously unselected package libleptonica-dev:amd64. 2021-06-03T19:04:19.9401974Z Preparing to unpack .../2-libleptonica-dev_1.79.0-1_amd64.deb ... 2021-06-03T19:04:19.9417121Z Unpacking libleptonica-dev:amd64 (1.79.0-1) ... 2021-06-03T19:04:20.1149472Z Selecting previously unselected package libtesseract4:amd64. 2021-06-03T19:04:20.1361221Z Preparing to unpack .../3-libtesseract4_4.1.1-2build2_amd64.deb ... 2021-06-03T19:04:20.1373069Z Unpacking libtesseract4:amd64 (4.1.1-2build2) ... 2021-06-03T19:04:20.2935704Z Selecting previously unselected package libtesseract-dev:amd64. 2021-06-03T19:04:20.3198392Z Preparing to unpack .../4-libtesseract-dev_4.1.1-2build2_amd64.deb ... 2021-06-03T19:04:20.3212833Z Unpacking libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-06-03T19:04:20.5073607Z Selecting previously unselected package tesseract-ocr-eng. 2021-06-03T19:04:20.5351210Z Preparing to unpack .../5-tesseract-ocr-eng_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-06-03T19:04:20.5362914Z Unpacking tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-06-03T19:04:20.7311249Z Selecting previously unselected package tesseract-ocr-osd. 2021-06-03T19:04:20.7588884Z Preparing to unpack .../6-tesseract-ocr-osd_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-06-03T19:04:20.7615054Z Unpacking tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-06-03T19:04:21.1195203Z Selecting previously unselected package tesseract-ocr. 2021-06-03T19:04:21.1430443Z Preparing to unpack .../7-tesseract-ocr_4.1.1-2build2_amd64.deb ... 2021-06-03T19:04:21.1441516Z Unpacking tesseract-ocr (4.1.1-2build2) ... 2021-06-03T19:04:21.2432527Z Setting up tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-06-03T19:04:21.2473546Z Setting up liblept5:amd64 (1.79.0-1) ... 2021-06-03T19:04:21.2515277Z Setting up libleptonica-dev:amd64 (1.79.0-1) ... 2021-06-03T19:04:21.2551849Z Setting up libtesseract4:amd64 (4.1.1-2build2) ... 2021-06-03T19:04:21.2594895Z Setting up libarchive-dev:amd64 (3.4.0-2ubuntu1) ... 2021-06-03T19:04:21.2629038Z Setting up tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-06-03T19:04:21.2657388Z Setting up libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-06-03T19:04:21.2693346Z Setting up tesseract-ocr (4.1.1-2build2) ... 2021-06-03T19:04:21.2737178Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:04:24.5636078Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:04:26.5699832Z Reading package lists... 2021-06-03T19:04:26.7196523Z Building dependency tree... 2021-06-03T19:04:26.7219996Z Reading state information... 2021-06-03T19:04:26.9751245Z wget is already the newest version (1.20.3-1ubuntu1). 2021-06-03T19:04:26.9752181Z 0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:04:27.5598513Z Reading package lists... 2021-06-03T19:04:27.5599686Z Building dependency tree... 2021-06-03T19:04:27.5600711Z Reading state information... 2021-06-03T19:04:27.5604042Z The following additional packages will be installed: 2021-06-03T19:04:27.5605990Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-06-03T19:04:27.5608515Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev 2021-06-03T19:04:27.5609516Z Suggested packages: 2021-06-03T19:04:27.5610676Z doc-base krb5-doc krb5-user libnorm-doc 2021-06-03T19:04:27.5611448Z The following NEW packages will be installed: 2021-06-03T19:04:27.5612758Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-06-03T19:04:27.5614067Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev libzmq3-dev 2021-06-03T19:04:27.5615001Z 0 upgraded, 10 newly installed, 0 to remove and 38 not upgraded. 2021-06-03T19:04:27.5615935Z Need to get 1459 kB of archives. 2021-06-03T19:04:27.5616758Z After this operation, 7754 kB of additional disk space will be used. 2021-06-03T19:04:27.5618420Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgssrpc4 amd64 1.17-6ubuntu4.1 [55.4 kB] 2021-06-03T19:04:27.5620557Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkdb5-9 amd64 1.17-6ubuntu4.1 [37.3 kB] 2021-06-03T19:04:27.5622620Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5srv-mit11 amd64 1.17-6ubuntu4.1 [49.5 kB] 2021-06-03T19:04:27.5624683Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5clnt-mit11 amd64 1.17-6ubuntu4.1 [37.6 kB] 2021-06-03T19:04:27.5627170Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 comerr-dev amd64 2.1-1.45.5-2ubuntu1 [39.9 kB] 2021-06-03T19:04:27.5630067Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 krb5-multidev amd64 1.17-6ubuntu4.1 [120 kB] 2021-06-03T19:04:27.5633376Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnorm-dev amd64 1.5.8+dfsg2-2build1 [463 kB] 2021-06-03T19:04:27.5637116Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpgm-dev amd64 5.2.122~dfsg-3ubuntu1 [189 kB] 2021-06-03T19:04:27.5649344Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkrb5-dev amd64 1.17-6ubuntu4.1 [11.7 kB] 2021-06-03T19:04:27.5651582Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzmq3-dev amd64 4.3.2-2ubuntu1 [455 kB] 2021-06-03T19:04:28.0515606Z Fetched 1459 kB in 0s (9366 kB/s) 2021-06-03T19:04:28.0886147Z Selecting previously unselected package libgssrpc4:amd64. 2021-06-03T19:04:28.0968424Z (Reading database ... 2021-06-03T19:04:28.0969216Z (Reading database ... 5% 2021-06-03T19:04:28.0970007Z (Reading database ... 10% 2021-06-03T19:04:28.0970775Z (Reading database ... 15% 2021-06-03T19:04:28.0971431Z (Reading database ... 20% 2021-06-03T19:04:28.0971934Z (Reading database ... 25% 2021-06-03T19:04:28.0972646Z (Reading database ... 30% 2021-06-03T19:04:28.0973704Z (Reading database ... 35% 2021-06-03T19:04:28.0974573Z (Reading database ... 40% 2021-06-03T19:04:28.0975025Z (Reading database ... 45% 2021-06-03T19:04:28.0975495Z (Reading database ... 50% 2021-06-03T19:04:28.1078279Z (Reading database ... 55% 2021-06-03T19:04:28.1137910Z (Reading database ... 60% 2021-06-03T19:04:28.1178180Z (Reading database ... 65% 2021-06-03T19:04:28.1247521Z (Reading database ... 70% 2021-06-03T19:04:28.1279015Z (Reading database ... 75% 2021-06-03T19:04:28.1313945Z (Reading database ... 80% 2021-06-03T19:04:28.1668570Z (Reading database ... 85% 2021-06-03T19:04:28.1778521Z (Reading database ... 90% 2021-06-03T19:04:28.2146450Z (Reading database ... 95% 2021-06-03T19:04:28.2147176Z (Reading database ... 100% 2021-06-03T19:04:28.2148122Z (Reading database ... 244589 files and directories currently installed.) 2021-06-03T19:04:28.2258837Z Preparing to unpack .../0-libgssrpc4_1.17-6ubuntu4.1_amd64.deb ... 2021-06-03T19:04:28.2286606Z Unpacking libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-06-03T19:04:28.2669864Z Selecting previously unselected package libkdb5-9:amd64. 2021-06-03T19:04:28.2911050Z Preparing to unpack .../1-libkdb5-9_1.17-6ubuntu4.1_amd64.deb ... 2021-06-03T19:04:28.2930585Z Unpacking libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-06-03T19:04:28.3311611Z Selecting previously unselected package libkadm5srv-mit11:amd64. 2021-06-03T19:04:28.3533562Z Preparing to unpack .../2-libkadm5srv-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-06-03T19:04:28.3546592Z Unpacking libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-06-03T19:04:28.3956332Z Selecting previously unselected package libkadm5clnt-mit11:amd64. 2021-06-03T19:04:28.4197572Z Preparing to unpack .../3-libkadm5clnt-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-06-03T19:04:28.4208906Z Unpacking libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-06-03T19:04:28.4589910Z Selecting previously unselected package comerr-dev:amd64. 2021-06-03T19:04:28.4800337Z Preparing to unpack .../4-comerr-dev_2.1-1.45.5-2ubuntu1_amd64.deb ... 2021-06-03T19:04:28.4841188Z Unpacking comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-06-03T19:04:28.5189814Z Selecting previously unselected package krb5-multidev:amd64. 2021-06-03T19:04:28.5465598Z Preparing to unpack .../5-krb5-multidev_1.17-6ubuntu4.1_amd64.deb ... 2021-06-03T19:04:28.5476022Z Unpacking krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-06-03T19:04:28.5971303Z Selecting previously unselected package libnorm-dev:amd64. 2021-06-03T19:04:28.6262863Z Preparing to unpack .../6-libnorm-dev_1.5.8+dfsg2-2build1_amd64.deb ... 2021-06-03T19:04:28.6275302Z Unpacking libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-06-03T19:04:28.7109450Z Selecting previously unselected package libpgm-dev:amd64. 2021-06-03T19:04:28.7326302Z Preparing to unpack .../7-libpgm-dev_5.2.122~dfsg-3ubuntu1_amd64.deb ... 2021-06-03T19:04:28.7339933Z Unpacking libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-06-03T19:04:28.7870198Z Selecting previously unselected package libkrb5-dev:amd64. 2021-06-03T19:04:28.8096809Z Preparing to unpack .../8-libkrb5-dev_1.17-6ubuntu4.1_amd64.deb ... 2021-06-03T19:04:28.8111523Z Unpacking libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-06-03T19:04:28.8429986Z Selecting previously unselected package libzmq3-dev:amd64. 2021-06-03T19:04:28.8735955Z Preparing to unpack .../9-libzmq3-dev_4.3.2-2ubuntu1_amd64.deb ... 2021-06-03T19:04:28.8756741Z Unpacking libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-06-03T19:04:29.0026133Z Setting up libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-06-03T19:04:29.0066841Z Setting up libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-06-03T19:04:29.0104408Z Setting up libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-06-03T19:04:29.0136179Z Setting up comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-06-03T19:04:29.0189615Z Setting up libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-06-03T19:04:29.0229151Z Setting up libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-06-03T19:04:29.0263580Z Setting up libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-06-03T19:04:29.0304836Z Setting up krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-06-03T19:04:29.0343287Z Setting up libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-06-03T19:04:29.0388993Z Setting up libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-06-03T19:04:29.0430622Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:04:29.0662047Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:04:32.4510641Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-06-03T19:04:34.5945712Z Reading package lists... 2021-06-03T19:04:34.7509683Z Building dependency tree... 2021-06-03T19:04:34.7533003Z Reading state information... 2021-06-03T19:04:34.8862028Z E: Unable to locate package udunits 2021-06-03T19:04:34.9585242Z Reading package lists... 2021-06-03T19:04:35.1276747Z Building dependency tree... 2021-06-03T19:04:35.1298120Z Reading state information... 2021-06-03T19:04:35.2945798Z The following additional packages will be installed: 2021-06-03T19:04:35.2946733Z libwebp6 libwebpdemux2 libwebpmux3 2021-06-03T19:04:35.3541699Z The following NEW packages will be installed: 2021-06-03T19:04:35.3546366Z libwebp-dev libwebpdemux2 2021-06-03T19:04:35.3555582Z The following packages will be upgraded: 2021-06-03T19:04:35.3560171Z libwebp6 libwebpmux3 2021-06-03T19:04:35.3759678Z 2 upgraded, 2 newly installed, 0 to remove and 36 not upgraded. 2021-06-03T19:04:35.3760537Z Need to get 480 kB of archives. 2021-06-03T19:04:35.3761373Z After this operation, 985 kB of additional disk space will be used. 2021-06-03T19:04:35.3764012Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwebp6 amd64 0.6.1-2ubuntu0.20.04.1 [185 kB] 2021-06-03T19:04:35.3804051Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwebpdemux2 amd64 0.6.1-2ubuntu0.20.04.1 [9576 B] 2021-06-03T19:04:35.3831853Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwebpmux3 amd64 0.6.1-2ubuntu0.20.04.1 [19.5 kB] 2021-06-03T19:04:35.3836215Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwebp-dev amd64 0.6.1-2ubuntu0.20.04.1 [266 kB] 2021-06-03T19:04:35.8508653Z Fetched 480 kB in 0s (18.0 MB/s) 2021-06-03T19:04:35.8967578Z (Reading database ... 2021-06-03T19:04:35.8968988Z (Reading database ... 5% 2021-06-03T19:04:35.8969846Z (Reading database ... 10% 2021-06-03T19:04:35.8970667Z (Reading database ... 15% 2021-06-03T19:04:35.8971950Z (Reading database ... 20% 2021-06-03T19:04:35.8972723Z (Reading database ... 25% 2021-06-03T19:04:35.8973497Z (Reading database ... 30% 2021-06-03T19:04:35.8974248Z (Reading database ... 35% 2021-06-03T19:04:35.8975947Z (Reading database ... 40% 2021-06-03T19:04:35.8976914Z (Reading database ... 45% 2021-06-03T19:04:35.8977724Z (Reading database ... 50% 2021-06-03T19:04:35.9068858Z (Reading database ... 55% 2021-06-03T19:04:35.9121849Z (Reading database ... 60% 2021-06-03T19:04:35.9164470Z (Reading database ... 65% 2021-06-03T19:04:35.9219040Z (Reading database ... 70% 2021-06-03T19:04:35.9250593Z (Reading database ... 75% 2021-06-03T19:04:35.9283954Z (Reading database ... 80% 2021-06-03T19:04:35.9621274Z (Reading database ... 85% 2021-06-03T19:04:35.9738564Z (Reading database ... 90% 2021-06-03T19:04:36.0101232Z (Reading database ... 95% 2021-06-03T19:04:36.0101853Z (Reading database ... 100% 2021-06-03T19:04:36.0102700Z (Reading database ... 244889 files and directories currently installed.) 2021-06-03T19:04:36.0230735Z Preparing to unpack .../libwebp6_0.6.1-2ubuntu0.20.04.1_amd64.deb ... 2021-06-03T19:04:36.0283223Z Unpacking libwebp6:amd64 (0.6.1-2ubuntu0.20.04.1) over (0.6.1-2) ... 2021-06-03T19:04:36.1231172Z Selecting previously unselected package libwebpdemux2:amd64. 2021-06-03T19:04:36.1433010Z Preparing to unpack .../libwebpdemux2_0.6.1-2ubuntu0.20.04.1_amd64.deb ... 2021-06-03T19:04:36.1448583Z Unpacking libwebpdemux2:amd64 (0.6.1-2ubuntu0.20.04.1) ... 2021-06-03T19:04:36.2064170Z Preparing to unpack .../libwebpmux3_0.6.1-2ubuntu0.20.04.1_amd64.deb ... 2021-06-03T19:04:36.2109232Z Unpacking libwebpmux3:amd64 (0.6.1-2ubuntu0.20.04.1) over (0.6.1-2) ... 2021-06-03T19:04:36.2470242Z Selecting previously unselected package libwebp-dev:amd64. 2021-06-03T19:04:36.2759025Z Preparing to unpack .../libwebp-dev_0.6.1-2ubuntu0.20.04.1_amd64.deb ... 2021-06-03T19:04:36.2776857Z Unpacking libwebp-dev:amd64 (0.6.1-2ubuntu0.20.04.1) ... 2021-06-03T19:04:36.3801392Z Setting up libwebp6:amd64 (0.6.1-2ubuntu0.20.04.1) ... 2021-06-03T19:04:36.3845907Z Setting up libwebpmux3:amd64 (0.6.1-2ubuntu0.20.04.1) ... 2021-06-03T19:04:36.3879850Z Setting up libwebpdemux2:amd64 (0.6.1-2ubuntu0.20.04.1) ... 2021-06-03T19:04:36.3921002Z Setting up libwebp-dev:amd64 (0.6.1-2ubuntu0.20.04.1) ... 2021-06-03T19:04:36.3966572Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:04:38.3755591Z Reading package lists... 2021-06-03T19:04:38.5296722Z Building dependency tree... 2021-06-03T19:04:38.5322393Z Reading state information... 2021-06-03T19:04:38.6928727Z The following additional packages will be installed: 2021-06-03T19:04:38.6930937Z gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-06-03T19:04:38.6932708Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-06-03T19:04:38.6934272Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-06-03T19:04:38.6937276Z Suggested packages: 2021-06-03T19:04:38.6939689Z cargo-doc gdb-doc gdbserver rust-doc rust-src 2021-06-03T19:04:38.6940593Z Recommended packages: 2021-06-03T19:04:38.6941216Z cargo 2021-06-03T19:04:38.7543129Z The following NEW packages will be installed: 2021-06-03T19:04:38.7547199Z cargo gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-06-03T19:04:38.7549242Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-06-03T19:04:38.7550910Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-06-03T19:04:38.7803618Z 0 upgraded, 13 newly installed, 0 to remove and 36 not upgraded. 2021-06-03T19:04:38.7804817Z Need to get 108 MB of archives. 2021-06-03T19:04:38.7805854Z After this operation, 501 MB of additional disk space will be used. 2021-06-03T19:04:38.7808045Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libbabeltrace1 amd64 1.5.8-1build1 [156 kB] 2021-06-03T19:04:38.7861912Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libipt2 amd64 2.0.1-1 [42.8 kB] 2021-06-03T19:04:38.7881235Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight-common all 3.1.8-1.2build5 [50.7 kB] 2021-06-03T19:04:38.7897319Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libboost-regex1.71.0 amd64 1.71.0-6ubuntu6 [471 kB] 2021-06-03T19:04:38.7980662Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight4v5 amd64 3.1.8-1.2build5 [232 kB] 2021-06-03T19:04:38.8020835Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxxhash0 amd64 0.7.3-1 [15.3 kB] 2021-06-03T19:04:38.8033764Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-1.47 amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [59.6 MB] 2021-06-03T19:04:39.0527200Z Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal/main amd64 gdb amd64 10.2-0ubuntu1~20.04~1 [3282 kB] 2021-06-03T19:04:39.9877574Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-dev amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [28.5 MB] 2021-06-03T19:04:40.4415942Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rustc amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [1921 kB] 2021-06-03T19:04:40.4651932Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 cargo amd64 0.47.0-1~exp1ubuntu1~20.04.1 [3147 kB] 2021-06-03T19:04:40.5016568Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libc6-dbg amd64 2.31-0ubuntu9.2 [10.5 MB] 2021-06-03T19:04:40.6583109Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rust-gdb all 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [27.5 kB] 2021-06-03T19:04:41.5646595Z Fetched 108 MB in 2s (56.8 MB/s) 2021-06-03T19:04:41.5649039Z Selecting previously unselected package libbabeltrace1:amd64. 2021-06-03T19:04:41.5650086Z (Reading database ... 2021-06-03T19:04:41.5650831Z (Reading database ... 5% 2021-06-03T19:04:41.5651607Z (Reading database ... 10% 2021-06-03T19:04:41.5652357Z (Reading database ... 15% 2021-06-03T19:04:41.5653260Z (Reading database ... 20% 2021-06-03T19:04:41.5654029Z (Reading database ... 25% 2021-06-03T19:04:41.5654794Z (Reading database ... 30% 2021-06-03T19:04:41.5655887Z (Reading database ... 35% 2021-06-03T19:04:41.5656647Z (Reading database ... 40% 2021-06-03T19:04:41.5657759Z (Reading database ... 45% 2021-06-03T19:04:41.5658507Z (Reading database ... 50% 2021-06-03T19:04:41.5659576Z (Reading 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libipt2 (2.0.1-1) ... 2021-06-03T19:04:41.5675074Z Selecting previously unselected package libsource-highlight-common. 2021-06-03T19:04:41.5676587Z Preparing to unpack .../02-libsource-highlight-common_3.1.8-1.2build5_all.deb ... 2021-06-03T19:04:41.5677912Z Unpacking libsource-highlight-common (3.1.8-1.2build5) ... 2021-06-03T19:04:41.5679669Z Selecting previously unselected package libboost-regex1.71.0:amd64. 2021-06-03T19:04:41.5681153Z Preparing to unpack .../03-libboost-regex1.71.0_1.71.0-6ubuntu6_amd64.deb ... 2021-06-03T19:04:41.5682385Z Unpacking libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-06-03T19:04:41.5988154Z Selecting previously unselected package libsource-highlight4v5. 2021-06-03T19:04:41.6238503Z Preparing to unpack .../04-libsource-highlight4v5_3.1.8-1.2build5_amd64.deb ... 2021-06-03T19:04:41.6257433Z Unpacking libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-06-03T19:04:41.6789447Z Selecting previously unselected package libxxhash0:amd64. 2021-06-03T19:04:41.7042387Z Preparing to unpack .../05-libxxhash0_0.7.3-1_amd64.deb ... 2021-06-03T19:04:41.7053759Z Unpacking libxxhash0:amd64 (0.7.3-1) ... 2021-06-03T19:04:41.7389635Z Selecting previously unselected package gdb. 2021-06-03T19:04:41.7620472Z Preparing to unpack .../06-gdb_10.2-0ubuntu1~20.04~1_amd64.deb ... 2021-06-03T19:04:41.7633946Z Unpacking gdb (10.2-0ubuntu1~20.04~1) ... 2021-06-03T19:04:42.1270532Z Selecting previously unselected package libstd-rust-1.47:amd64. 2021-06-03T19:04:42.1507682Z Preparing to unpack .../07-libstd-rust-1.47_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-06-03T19:04:42.1519451Z Unpacking libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-06-03T19:04:48.9750521Z Selecting previously unselected package libstd-rust-dev:amd64. 2021-06-03T19:04:48.9990673Z Preparing to unpack .../08-libstd-rust-dev_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-06-03T19:04:49.0007870Z Unpacking libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-06-03T19:04:52.3269740Z Selecting previously unselected package rustc. 2021-06-03T19:04:52.3551116Z Preparing to unpack .../09-rustc_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-06-03T19:04:52.3568462Z Unpacking rustc (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-06-03T19:04:52.5588758Z Selecting previously unselected package cargo. 2021-06-03T19:04:52.5882984Z Preparing to unpack .../10-cargo_0.47.0-1~exp1ubuntu1~20.04.1_amd64.deb ... 2021-06-03T19:04:52.5893916Z Unpacking cargo (0.47.0-1~exp1ubuntu1~20.04.1) ... 2021-06-03T19:04:52.9750935Z Selecting previously unselected package libc6-dbg:amd64. 2021-06-03T19:04:53.0015990Z Preparing to unpack .../11-libc6-dbg_2.31-0ubuntu9.2_amd64.deb ... 2021-06-03T19:04:53.0046876Z Unpacking libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-06-03T19:04:54.2830283Z Selecting previously unselected package rust-gdb. 2021-06-03T19:04:54.3074742Z Preparing to unpack .../12-rust-gdb_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_all.deb ... 2021-06-03T19:04:54.3104741Z Unpacking rust-gdb (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-06-03T19:04:54.3781279Z Setting up libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-06-03T19:04:54.3819379Z Setting up libsource-highlight-common (3.1.8-1.2build5) ... 2021-06-03T19:04:54.3863082Z Setting up libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-06-03T19:04:54.3899074Z Setting up libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-06-03T19:04:54.3931783Z Setting up libipt2 (2.0.1-1) ... 2021-06-03T19:04:54.3969154Z Setting up libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-06-03T19:04:54.4001902Z Setting up libbabeltrace1:amd64 (1.5.8-1build1) ... 2021-06-03T19:04:54.4034409Z Setting up rustc (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-06-03T19:04:54.4062785Z Setting up libxxhash0:amd64 (0.7.3-1) ... 2021-06-03T19:04:54.4099334Z Setting up libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-06-03T19:04:54.4135663Z Setting up cargo (0.47.0-1~exp1ubuntu1~20.04.1) ... 2021-06-03T19:04:54.4173757Z Setting up gdb (10.2-0ubuntu1~20.04~1) ... 2021-06-03T19:04:54.4220750Z Setting up rust-gdb (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-06-03T19:04:54.4258144Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:04:54.4504859Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:04:57.8993411Z Reading package lists... 2021-06-03T19:04:58.0588987Z Building dependency tree... 2021-06-03T19:04:58.0612906Z Reading state information... 2021-06-03T19:04:58.2378469Z The following additional packages will be installed: 2021-06-03T19:04:58.2380187Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-06-03T19:04:58.2381654Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-06-03T19:04:58.2383104Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-06-03T19:04:58.2386971Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-06-03T19:04:58.2389059Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-06-03T19:04:58.2390830Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-06-03T19:04:58.2392054Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-06-03T19:04:58.2394481Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-06-03T19:04:58.2396506Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-06-03T19:04:58.2397886Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-06-03T19:04:58.2399507Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-06-03T19:04:58.2400972Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-06-03T19:04:58.2403144Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-06-03T19:04:58.2405414Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-06-03T19:04:58.2407025Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-06-03T19:04:58.2408581Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-06-03T19:04:58.2410060Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-06-03T19:04:58.2411534Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-06-03T19:04:58.2413106Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-06-03T19:04:58.2414355Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-06-03T19:04:58.2415555Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-06-03T19:04:58.2416840Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-06-03T19:04:58.2418057Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-06-03T19:04:58.2419199Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-06-03T19:04:58.2420382Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-06-03T19:04:58.2421811Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-06-03T19:04:58.2423672Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-06-03T19:04:58.2425133Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-06-03T19:04:58.2426628Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-06-03T19:04:58.2428588Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-06-03T19:04:58.2430004Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-06-03T19:04:58.2431478Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-06-03T19:04:58.2432869Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-06-03T19:04:58.2434300Z python3-cycler python3-dateutil python3-decorator python3-future 2021-06-03T19:04:58.2435814Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-06-03T19:04:58.2437342Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-06-03T19:04:58.2438783Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-06-03T19:04:58.2440179Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-06-03T19:04:58.2441528Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-06-03T19:04:58.2443126Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-06-03T19:04:58.2444710Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-06-03T19:04:58.2446066Z python3-webencodings qdoc-qt5 qgis-common qgis-plugin-grass 2021-06-03T19:04:58.2447419Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-06-03T19:04:58.2449921Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-06-03T19:04:58.2451771Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-06-03T19:04:58.2453592Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-06-03T19:04:58.2455383Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-06-03T19:04:58.2457036Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-06-03T19:04:58.2458300Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-06-03T19:04:58.2459337Z Suggested packages: 2021-06-03T19:04:58.2460437Z avahi-autoipd blt-demo libgdal-grass grass-dev grass-gui e00compr avce00 2021-06-03T19:04:58.2461770Z gnuplot gpsbabel gpstrans netpbm python3-rpy2 python3-termcolor grass 2021-06-03T19:04:58.2463178Z grass-dev-doc gvfs exiv2 geotiff-bin libgeotiff-epsg libvisual-0.4-plugins 2021-06-03T19:04:58.2464640Z libhdf4-doc libhdf4-alt-dev hdf4-tools libjs-jquery-ui-docs avahi-autoipd 2021-06-03T19:04:58.2465926Z | zeroconf ogdi-bin pcscd libqscintilla2-doc qtwayland5 2021-06-03T19:04:58.2467300Z qt5-qmltooling-plugins pinentry-doc python-cycler-doc python-future-doc 2021-06-03T19:04:58.2469299Z python3-genshi python3-lxml-dbg python-lxml-doc dvipng gir1.2-gtk-3.0 2021-06-03T19:04:58.2470946Z inkscape ipython3 python-matplotlib-doc python3-cairocffi python3-gi-cairo 2021-06-03T19:04:58.2473099Z python3-gobject python3-nose python3-scipy python3-tornado 2021-06-03T19:04:58.2474457Z texlive-extra-utils texlive-latex-extra ttf-staypuft python-numpy-doc 2021-06-03T19:04:58.2475940Z python3-pytest python3-numpy-dbg owslib-doc python-pil-doc python3-pil-dbg 2021-06-03T19:04:58.2477784Z python3-pandas python3-ipykernel python-psycopg2-doc python-pyparsing-doc 2021-06-03T19:04:58.2479520Z python3-pyqt5-dbg otb-qgis saga tix python3-tk-dbg qt5-doc comgt wvdial 2021-06-03T19:04:58.2480967Z wpagui libengine-pkcs11-openssl 2021-06-03T19:04:59.0685281Z The following NEW packages will be installed: 2021-06-03T19:04:59.0688161Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-06-03T19:04:59.0690387Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-06-03T19:04:59.0692909Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-06-03T19:04:59.0695154Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-06-03T19:04:59.0697150Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-06-03T19:04:59.0702080Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-06-03T19:04:59.0703475Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-06-03T19:04:59.0705650Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-06-03T19:04:59.0707370Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-06-03T19:04:59.0708989Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-06-03T19:04:59.0710458Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-06-03T19:04:59.0711927Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-06-03T19:04:59.0713652Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-06-03T19:04:59.0715419Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-06-03T19:04:59.0717289Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-06-03T19:04:59.0719568Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-06-03T19:04:59.0721705Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-06-03T19:04:59.0723247Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-06-03T19:04:59.0724747Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-06-03T19:04:59.0726151Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-06-03T19:04:59.0727626Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-06-03T19:04:59.0729262Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-06-03T19:04:59.0730530Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-06-03T19:04:59.0731724Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-06-03T19:04:59.0732971Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-06-03T19:04:59.0736002Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-06-03T19:04:59.0737576Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-06-03T19:04:59.0739248Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-06-03T19:04:59.0740800Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-06-03T19:04:59.0742230Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-06-03T19:04:59.0743605Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-06-03T19:04:59.0745041Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-06-03T19:04:59.0746473Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-06-03T19:04:59.0748591Z python3-cycler python3-dateutil python3-decorator python3-future 2021-06-03T19:04:59.0750358Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-06-03T19:04:59.0751966Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-06-03T19:04:59.0753462Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-06-03T19:04:59.0754907Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-06-03T19:04:59.0756323Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-06-03T19:04:59.0758045Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-06-03T19:04:59.0759709Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-06-03T19:04:59.0761194Z python3-webencodings qdoc-qt5 qgis qgis-common qgis-plugin-grass 2021-06-03T19:04:59.0762774Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-06-03T19:04:59.0765324Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-06-03T19:04:59.0767407Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-06-03T19:04:59.0768924Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-06-03T19:04:59.0770393Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-06-03T19:04:59.0772002Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-06-03T19:04:59.0773739Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-06-03T19:04:59.0774828Z 0 upgraded, 214 newly installed, 0 to remove and 36 not upgraded. 2021-06-03T19:04:59.0775563Z Need to get 183 MB of archives. 2021-06-03T19:04:59.0776367Z After this operation, 776 MB of additional disk space will be used. 2021-06-03T19:04:59.0778396Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdouble-conversion3 amd64 3.1.5-4ubuntu1 [37.9 kB] 2021-06-03T19:04:59.0780576Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5core5a amd64 5.12.8+dfsg-0ubuntu1 [2005 kB] 2021-06-03T19:04:59.0782624Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl-mesa0 amd64 20.2.6-0ubuntu0.20.04.1 [97.7 kB] 2021-06-03T19:04:59.0784838Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl1 amd64 1.3.2-1~ubuntu0.20.04.1 [31.9 kB] 2021-06-03T19:04:59.0787076Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libevdev2 amd64 1.9.0+dfsg-1ubuntu0.1 [31.6 kB] 2021-06-03T19:04:59.0789191Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmtdev1 amd64 1.1.5-1.1 [14.2 kB] 2021-06-03T19:04:59.0791113Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-common all 1.3-2ubuntu3 [45.3 kB] 2021-06-03T19:04:59.0793514Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom2 amd64 1.3-2ubuntu3 [20.0 kB] 2021-06-03T19:04:59.0795428Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput-bin amd64 1.15.5-1ubuntu0.2 [19.1 kB] 2021-06-03T19:04:59.0797599Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput10 amd64 1.15.5-1ubuntu0.2 [112 kB] 2021-06-03T19:04:59.0800092Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5dbus5 amd64 5.12.8+dfsg-0ubuntu1 [208 kB] 2021-06-03T19:04:59.0804347Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5network5 amd64 5.12.8+dfsg-0ubuntu1 [674 kB] 2021-06-03T19:04:59.0806412Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [10.8 kB] 2021-06-03T19:04:59.0808664Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-util1 amd64 0.4.0-0ubuntu3 [11.2 kB] 2021-06-03T19:04:59.0810657Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-image0 amd64 0.4.0-1build1 [12.3 kB] 2021-06-03T19:04:59.0814134Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-keysyms1 amd64 0.4.0-1build1 [8452 B] 2021-06-03T19:04:59.0817142Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-randr0 amd64 1.14-2 [16.3 kB] 2021-06-03T19:04:59.0819141Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-render-util0 amd64 0.3.9-1build1 [9912 B] 2021-06-03T19:04:59.0821495Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinerama0 amd64 1.14-2 [5260 B] 2021-06-03T19:04:59.0823859Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinput0 amd64 1.14-2 [29.3 kB] 2021-06-03T19:04:59.0825813Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xkb1 amd64 1.14-2 [29.6 kB] 2021-06-03T19:04:59.0829576Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxkbcommon-x11-0 amd64 0.10.0-1 [13.4 kB] 2021-06-03T19:04:59.0832200Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5gui5 amd64 5.12.8+dfsg-0ubuntu1 [2971 kB] 2021-06-03T19:04:59.0834971Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5widgets5 amd64 5.12.8+dfsg-0ubuntu1 [2293 kB] 2021-06-03T19:04:59.0837659Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5svg5 amd64 5.12.8-0ubuntu1 [131 kB] 2021-06-03T19:04:59.0840174Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liborc-0.4-0 amd64 1:0.4.31-1 [188 kB] 2021-06-03T19:04:59.0842794Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgstreamer-plugins-base1.0-0 amd64 1.16.2-4ubuntu0.1 [735 kB] 2021-06-03T19:04:59.0845602Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhyphen0 amd64 2.8.8-7 [27.0 kB] 2021-06-03T19:04:59.0849937Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5positioning5 amd64 5.12.8+dfsg-0ubuntu1 [197 kB] 2021-06-03T19:04:59.0852642Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5printsupport5 amd64 5.12.8+dfsg-0ubuntu1 [193 kB] 2021-06-03T19:04:59.0854834Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5qml5 amd64 5.12.8-0ubuntu1 [1438 kB] 2021-06-03T19:04:59.0856818Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quick5 amd64 5.12.8-0ubuntu1 [1335 kB] 2021-06-03T19:04:59.0859714Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sensors5 amd64 5.12.8-0ubuntu1 [114 kB] 2021-06-03T19:04:59.0862580Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webchannel5 amd64 5.12.8-0ubuntu1 [51.2 kB] 2021-06-03T19:04:59.0865150Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwoff1 amd64 1.0.2-1build2 [42.0 kB] 2021-06-03T19:04:59.0868119Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webkit5 amd64 5.212.0~alpha4-1ubuntu2 [12.1 MB] 2021-06-03T19:04:59.3578712Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-image-formats-plugins amd64 5.12.8-0ubuntu1 [43.4 kB] 2021-06-03T19:04:59.5039254Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers-common all 3.10.4+dfsg-1ubuntu2 [897 kB] 2021-06-03T19:04:59.8736427Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2 amd64 2.2.1-2build1 [307 kB] 2021-06-03T19:04:59.9535056Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2-plugins amd64 2.2.1-2build1 [191 kB] 2021-06-03T19:04:59.9614276Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5 amd64 5.12.8+dfsg-0ubuntu1 [121 kB] 2021-06-03T19:04:59.9648394Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5-sqlite amd64 5.12.8+dfsg-0ubuntu1 [47.5 kB] 2021-06-03T19:04:59.9664486Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-data all 3.0.4+dfsg-1build3 [186 kB] 2021-06-03T19:04:59.9701201Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarpack2 amd64 3.7.0-3 [92.8 kB] 2021-06-03T19:04:59.9710511Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsuperlu5 amd64 5.2.1+dfsg1-4 [159 kB] 2021-06-03T19:04:59.9759946Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarmadillo9 amd64 1:9.800.4+dfsg-1build1 [93.2 kB] 2021-06-03T19:04:59.9774174Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcfitsio8 amd64 3.470-3 [466 kB] 2021-06-03T19:04:59.9847329Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcharls2 amd64 2.0.0+dfsg-1build1 [74.1 kB] 2021-06-03T19:04:59.9867044Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdap25 amd64 3.20.5-1 [435 kB] 2021-06-03T19:04:59.9959236Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdapclient6v5 amd64 3.20.5-1 [92.2 kB] 2021-06-03T19:04:59.9976783Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libepsilon1 amd64 0.9.2+dfsg-4 [41.0 kB] 2021-06-03T19:04:59.9987346Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfreexl1 amd64 1.0.5-3 [33.4 kB] 2021-06-03T19:04:59.9996043Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfyba0 amd64 4.1.1-6build1 [113 kB] 2021-06-03T19:05:00.0024735Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-3.8.0 amd64 3.8.0-1build1 [535 kB] 2021-06-03T19:05:00.0109499Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-c1v5 amd64 3.8.0-1build1 [69.9 kB] 2021-06-03T19:05:00.0214221Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-data all 6.3.1-1 [7647 kB] 2021-06-03T19:05:00.1767893Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libproj15 amd64 6.3.1-1 [925 kB] 2021-06-03T19:05:00.1910045Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeotiff5 amd64 1.5.1-2 [53.1 kB] 2021-06-03T19:05:00.1932118Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf4-0-alt amd64 4.2.14-1ubuntu1 [268 kB] 2021-06-03T19:05:00.2010209Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libminizip1 amd64 1.1-8build1 [20.2 kB] 2021-06-03T19:05:00.2016318Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liburiparser1 amd64 0.9.3-2 [39.3 kB] 2021-06-03T19:05:00.2028200Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlbase1 amd64 1.3.0-8build1 [45.4 kB] 2021-06-03T19:05:00.2039028Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmldom1 amd64 1.3.0-8build1 [152 kB] 2021-06-03T19:05:00.2086449Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlengine1 amd64 1.3.0-8build1 [72.5 kB] 2021-06-03T19:05:00.2115073Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnetcdf15 amd64 1:4.7.3-1 [341 kB] 2021-06-03T19:05:00.2255230Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libogdi4.1 amd64 4.1.0+ds-1build1 [198 kB] 2021-06-03T19:05:00.2310473Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqhull7 amd64 2015.2-4 [152 kB] 2021-06-03T19:05:00.2411155Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialite7 amd64 4.3.0a-6build1 [1286 kB] 2021-06-03T19:05:00.2629288Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxerces-c3.2 amd64 3.2.2+debian-1build3 [878 kB] 2021-06-03T19:05:00.2759507Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgdal26 amd64 3.0.4+dfsg-1build3 [6156 kB] 2021-06-03T19:05:00.3878103Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5concurrent5 amd64 5.12.8+dfsg-0ubuntu1 [33.5 kB] 2021-06-03T19:05:00.3881803Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5keychain1 amd64 0.10.0-1build1 [48.4 kB] 2021-06-03T19:05:00.4592020Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5serialport5 amd64 5.12.8-0ubuntu1 [33.1 kB] 2021-06-03T19:05:00.4613240Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5xml5 amd64 5.12.8+dfsg-0ubuntu1 [105 kB] 2021-06-03T19:05:00.4652558Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialindex6 amd64 1.9.3-1build1 [266 kB] 2021-06-03T19:05:00.4761549Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzip5 amd64 1.5.1-0ubuntu1 [46.7 kB] 2021-06-03T19:05:00.6247214Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-core3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [5216 kB] 2021-06-03T19:05:01.3478319Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-native3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [44.5 kB] 2021-06-03T19:05:01.3488752Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-l10n all 2.11.2+dfsg-6 [41.3 kB] 2021-06-03T19:05:01.3521807Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-15 amd64 2.11.2+dfsg-6 [1238 kB] 2021-06-03T19:05:01.3771039Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quickwidgets5 amd64 5.12.8-0ubuntu1 [39.8 kB] 2021-06-03T19:05:01.3788800Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5opengl5 amd64 5.12.8+dfsg-0ubuntu1 [136 kB] 2021-06-03T19:05:01.3823596Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqwt-qt5-6 amd64 6.1.4-1.1build1 [427 kB] 2021-06-03T19:05:01.4677458Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-gui3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3195 kB] 2021-06-03T19:05:01.6192557Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers amd64 3.10.4+dfsg-1ubuntu2 [1940 kB] 2021-06-03T19:05:01.6409160Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-core7 amd64 0.7-4ubuntu7 [81.7 kB] 2021-06-03T19:05:01.6424549Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdaemon0 amd64 0.14-7 [13.9 kB] 2021-06-03T19:05:01.6432367Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 avahi-daemon amd64 0.7-4ubuntu7 [61.0 kB] 2021-06-03T19:05:01.6443445Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4 [572 kB] 2021-06-03T19:05:01.6577428Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 blt amd64 2.5.3+dfsg-4 [4944 B] 2021-06-03T19:05:01.6583356Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 fonts-lyx all 2.3.4.2-2 [154 kB] 2021-06-03T19:05:01.6624031Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgck-1-0 amd64 3.36.0-2build1 [75.5 kB] 2021-06-03T19:05:01.6649149Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-base-3-1 amd64 3.36.0-2build1 [193 kB] 2021-06-03T19:05:01.6711835Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-ui-3-1 amd64 3.36.0-2build1 [127 kB] 2021-06-03T19:05:01.6756980Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gcr amd64 3.36.0-2build1 [63.9 kB] 2021-06-03T19:05:01.6788972Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-numpy amd64 1:1.17.4-5ubuntu3 [2725 kB] 2021-06-03T19:05:01.7372720Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-gdal amd64 3.0.4+dfsg-1build3 [527 kB] 2021-06-03T19:05:01.7457570Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-bin amd64 3.0.4+dfsg-1build3 [256 kB] 2021-06-03T19:05:01.7540804Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-glib1 amd64 0.7-4ubuntu7 [7804 B] 2021-06-03T19:05:01.7543071Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmm-glib0 amd64 1.12.8-1 [185 kB] 2021-06-03T19:05:01.7576397Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 geoclue-2.0 amd64 2.5.6-0ubuntu1 [91.9 kB] 2021-06-03T19:05:01.9690472Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit-modules amd64 0.23.20-1ubuntu0.1 [231 kB] 2021-06-03T19:05:05.1692262Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit amd64 0.23.20-1ubuntu0.1 [93.8 kB] 2021-06-03T19:05:05.2427002Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 pinentry-gnome3 amd64 1.1.0-3build1 [38.6 kB] 2021-06-03T19:05:05.2439645Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring amd64 3.36.0-1ubuntu1 [613 kB] 2021-06-03T19:05:05.2558787Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring-pkcs11 amd64 3.36.0-1ubuntu1 [28.0 kB] 2021-06-03T19:05:05.5231821Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-doc all 7.8.2-1build3 [32.4 MB] 2021-06-03T19:05:06.9404010Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblaszip8 amd64 3.4.3-1build1 [125 kB] 2021-06-03T19:05:06.9840810Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-util9 amd64 2.0.1+ds-1build3 [68.5 kB] 2021-06-03T19:05:06.9981461Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-base9 amd64 2.0.1+ds-1build3 [1739 kB] 2021-06-03T19:05:07.0609930Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-core amd64 7.8.2-1build3 [5737 kB] 2021-06-03T19:05:07.1647779Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdparanoia0 amd64 3.10.2+debian-13 [46.7 kB] 2021-06-03T19:05:07.1661387Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvisual-0.4-0 amd64 0.4.0-17 [99.8 kB] 2021-06-03T19:05:07.1677807Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 gstreamer1.0-plugins-base amd64 1.16.2-4ubuntu0.1 [620 kB] 2021-06-03T19:05:07.1770935Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 iio-sensor-proxy amd64 2.8-1ubuntu1 [35.8 kB] 2021-06-03T19:05:07.1781170Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libassimp5 amd64 5.0.1~ds0-1build1 [2775 kB] 2021-06-03T19:05:07.2805952Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libexiv2-27 amd64 0.27.2-8ubuntu2.4 [789 kB] 2021-06-03T19:05:07.2941471Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi0ldbl amd64 2.4.0-10build1 [155 kB] 2021-06-03T19:05:07.2962808Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi-bin amd64 2.4.0-10build1 [10.5 kB] 2021-06-03T19:05:07.2972393Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimagequant0 amd64 2.12.2-1.1 [31.4 kB] 2021-06-03T19:05:07.2982386Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] 2021-06-03T19:05:07.3010364Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-glib4 amd64 1.22.0-2 [101 kB] 2021-06-03T19:05:07.3033503Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-proxy amd64 1.22.0-2 [5908 B] 2021-06-03T19:05:07.3040047Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-genl-3-200 amd64 3.4.0-1 [11.1 kB] 2021-06-03T19:05:07.3045594Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-route-3-200 amd64 3.4.0-1 [149 kB] 2021-06-03T19:05:07.3067469Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnss-mdns amd64 0.14.1-1ubuntu1 [22.9 kB] 2021-06-03T19:05:07.3081288Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpam-gnome-keyring amd64 3.36.0-1ubuntu1 [23.3 kB] 2021-06-03T19:05:07.3086441Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpcsclite1 amd64 1.8.26-3 [22.0 kB] 2021-06-03T19:05:07.4476989Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-faux amd64 2.0.1+ds-1build3 [27.3 kB] 2021-06-03T19:05:07.5901193Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-icebridge amd64 2.0.1+ds-1build3 [42.8 kB] 2021-06-03T19:05:07.7283777Z Get:131 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-pgpointcloud amd64 2.0.1+ds-1build3 [75.3 kB] 2021-06-03T19:05:07.8705675Z Get:132 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-python amd64 2.0.1+ds-1build3 [136 kB] 2021-06-03T19:05:07.8737294Z Get:133 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsqlite3-mod-spatialite amd64 4.3.0a-6build1 [1265 kB] 2021-06-03T19:05:08.0575076Z Get:134 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-sqlite amd64 2.0.1+ds-1build3 [89.5 kB] 2021-06-03T19:05:08.1907236Z Get:135 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugins amd64 2.0.1+ds-1build3 [12.9 kB] 2021-06-03T19:05:08.3392021Z Get:136 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dcore5 amd64 5.12.8+dfsg-0ubuntu1 [137 kB] 2021-06-03T19:05:08.4895199Z Get:137 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53drender5 amd64 5.12.8+dfsg-0ubuntu1 [689 kB] 2021-06-03T19:05:08.6475379Z Get:138 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53danimation5 amd64 5.12.8+dfsg-0ubuntu1 [159 kB] 2021-06-03T19:05:08.7916056Z Get:139 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dinput5 amd64 5.12.8+dfsg-0ubuntu1 [125 kB] 2021-06-03T19:05:08.9557680Z Get:140 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dlogic5 amd64 5.12.8+dfsg-0ubuntu1 [25.9 kB] 2021-06-03T19:05:09.1107640Z Get:141 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dextras5 amd64 5.12.8+dfsg-0ubuntu1 [157 kB] 2021-06-03T19:05:09.2663864Z Get:142 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-assimpsceneimport-plugin amd64 5.12.8+dfsg-0ubuntu1 [45.2 kB] 2021-06-03T19:05:09.4945928Z Get:143 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-defaultgeometryloader-plugin amd64 5.12.8+dfsg-0ubuntu1 [33.3 kB] 2021-06-03T19:05:09.5878643Z Get:144 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-gltfsceneio-plugin amd64 5.12.8+dfsg-0ubuntu1 [110 kB] 2021-06-03T19:05:09.7669275Z Get:145 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dquickscene2d5 amd64 5.12.8+dfsg-0ubuntu1 [38.4 kB] 2021-06-03T19:05:09.9066984Z Get:146 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-scene2d-plugin amd64 5.12.8+dfsg-0ubuntu1 [17.1 kB] 2021-06-03T19:05:10.0454105Z Get:147 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-3d3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [224 kB] 2021-06-03T19:05:10.3218734Z Get:148 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-analysis3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [927 kB] 2021-06-03T19:05:10.5534535Z Get:149 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-app3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3060 kB] 2021-06-03T19:05:10.6914244Z Get:150 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtchooser amd64 66-2build1 [24.7 kB] 2021-06-03T19:05:10.6927707Z Get:151 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qdoc-qt5 amd64 5.12.8-0ubuntu1 [507 kB] 2021-06-03T19:05:10.6997644Z Get:152 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5help5 amd64 5.12.8-0ubuntu1 [134 kB] 2021-06-03T19:05:10.7022013Z Get:153 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qhelpgenerator-qt5 amd64 5.12.8-0ubuntu1 [64.3 kB] 2021-06-03T19:05:10.7042753Z Get:154 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-assistant amd64 5.12.8-0ubuntu1 [369 kB] 2021-06-03T19:05:10.7095370Z Get:155 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtattributionsscanner-qt5 amd64 5.12.8-0ubuntu1 [26.0 kB] 2021-06-03T19:05:10.7106536Z Get:156 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designer5 amd64 5.12.8-0ubuntu1 [2778 kB] 2021-06-03T19:05:10.7496474Z Get:157 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designercomponents5 amd64 5.12.8-0ubuntu1 [718 kB] 2021-06-03T19:05:10.7603114Z Get:158 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttools5-dev-tools amd64 5.12.8-0ubuntu1 [1031 kB] 2021-06-03T19:05:10.8444685Z Get:159 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-customwidgets amd64 3.10.4+dfsg-1ubuntu2 [3397 kB] 2021-06-03T19:05:10.9873036Z Get:160 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-server3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [311 kB] 2021-06-03T19:05:11.0597131Z Get:161 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgisgrass7-3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [228 kB] 2021-06-03T19:05:11.1317317Z Get:162 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgispython3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [43.1 kB] 2021-06-03T19:05:11.1327511Z Get:163 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-glib5 amd64 1.24.8-1 [529 kB] 2021-06-03T19:05:11.1474787Z Get:164 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-proxy amd64 1.24.8-1 [5856 B] 2021-06-03T19:05:11.1477409Z Get:165 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5test5 amd64 5.12.8+dfsg-0ubuntu1 [131 kB] 2021-06-03T19:05:11.1496425Z Get:166 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-bin amd64 1.3-2ubuntu3 [5484 B] 2021-06-03T19:05:11.1498860Z Get:167 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 modemmanager amd64 1.12.8-1 [755 kB] 2021-06-03T19:05:11.1571629Z Get:168 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 ttf-bitstream-vera all 1.10-8 [352 kB] 2021-06-03T19:05:11.1609369Z Get:169 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python-matplotlib-data all 3.1.2-1ubuntu4 [3788 kB] 2021-06-03T19:05:11.2166514Z Get:170 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-soupsieve all 1.9.5+dfsg-1 [29.1 kB] 2021-06-03T19:05:11.2171104Z Get:171 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-bs4 all 4.8.2-1 [83.0 kB] 2021-06-03T19:05:11.2181781Z Get:172 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-cycler all 0.10.0-3 [8132 B] 2021-06-03T19:05:11.2183841Z Get:173 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-dateutil all 2.7.3-3ubuntu1 [63.3 kB] 2021-06-03T19:05:11.2195985Z Get:174 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-decorator all 4.4.2-0ubuntu1 [10.3 kB] 2021-06-03T19:05:11.2909655Z Get:175 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-future all 0.18.2-2 [336 kB] 2021-06-03T19:05:11.2989544Z Get:176 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-webencodings all 0.5.1-1ubuntu1 [11.0 kB] 2021-06-03T19:05:11.2997441Z Get:177 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-html5lib all 1.0.1-2 [84.3 kB] 2021-06-03T19:05:11.3000478Z Get:178 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-ipython-genutils all 0.2.0-1ubuntu1 [21.1 kB] 2021-06-03T19:05:11.3007336Z Get:179 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-traitlets all 4.3.3-3 [59.9 kB] 2021-06-03T19:05:11.3012062Z Get:180 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-jupyter-core all 4.6.3-3 [41.2 kB] 2021-06-03T19:05:11.3014668Z Get:181 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-kiwisolver amd64 1.0.1-3build1 [61.3 kB] 2021-06-03T19:05:11.3017267Z Get:182 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-lxml amd64 4.5.0-1ubuntu0.3 [1382 kB] 2021-06-03T19:05:11.3188561Z Get:183 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-pyparsing all 2.4.6-1 [61.3 kB] 2021-06-03T19:05:11.3198215Z Get:184 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-matplotlib amd64 3.1.2-1ubuntu4 [4459 kB] 2021-06-03T19:05:11.3847936Z Get:185 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-nbformat all 5.0.4-1 [29.8 kB] 2021-06-03T19:05:11.3850483Z Get:186 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-olefile all 0.46-2 [33.7 kB] 2021-06-03T19:05:11.3852888Z Get:187 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyproj amd64 2.5.0+ds-1 [297 kB] 2021-06-03T19:05:11.3882452Z Get:188 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-tz all 2019.3-1 [24.4 kB] 2021-06-03T19:05:11.5296542Z Get:189 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-owslib all 0.19.1-1 [115 kB] 2021-06-03T19:05:11.7421266Z Get:190 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-pil amd64 7.0.0-4ubuntu0.4 [363 kB] 2021-06-03T19:05:11.8193047Z Get:191 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-retrying all 1.3.3-4 [8160 B] 2021-06-03T19:05:11.9587694Z Get:192 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-plotly all 4.4.1+dfsg-1 [1960 kB] 2021-06-03T19:05:13.0722286Z Get:193 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-psycopg2 amd64 2.8.4-2 [112 kB] 2021-06-03T19:05:13.0726369Z Get:194 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-sip amd64 4.19.21+dfsg-1build1 [87.9 kB] 2021-06-03T19:05:13.0728841Z Get:195 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5 amd64 5.14.1+dfsg-3build1 [2318 kB] 2021-06-03T19:05:13.0731128Z Get:196 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qsci amd64 2.11.2+dfsg-6 [230 kB] 2021-06-03T19:05:13.0733487Z Get:197 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsql amd64 5.14.1+dfsg-3build1 [87.5 kB] 2021-06-03T19:05:13.0735868Z Get:198 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsvg amd64 5.14.1+dfsg-3build1 [26.9 kB] 2021-06-03T19:05:13.0738699Z Get:199 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtwebkit amd64 5.14.1+dfsg-3build1 [103 kB] 2021-06-03T19:05:13.0741109Z Get:200 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis-common all 3.10.4+dfsg-1ubuntu2 [2390 kB] 2021-06-03T19:05:13.0743435Z Get:201 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis amd64 3.10.4+dfsg-1ubuntu2 [7772 kB] 2021-06-03T19:05:13.0745666Z Get:202 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-tk amd64 3.8.10-0ubuntu1~20.04 [104 kB] 2021-06-03T19:05:13.0767263Z Get:203 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-leaflet all 1.6.0~dfsg-1 [313 kB] 2021-06-03T19:05:13.1758999Z Get:204 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-common all 3.10.4+dfsg-1ubuntu2 [16.7 MB] 2021-06-03T19:05:13.7895495Z Get:205 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis amd64 3.10.4+dfsg-1ubuntu2 [4788 kB] 2021-06-03T19:05:13.9542570Z Get:206 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass-common all 3.10.4+dfsg-1ubuntu2 [463 kB] 2021-06-03T19:05:14.0333232Z Get:207 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-provider-grass amd64 3.10.4+dfsg-1ubuntu2 [92.3 kB] 2021-06-03T19:05:14.1133708Z Get:208 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass amd64 3.10.4+dfsg-1ubuntu2 [601 kB] 2021-06-03T19:05:14.1203518Z Get:209 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-gtk-platformtheme amd64 5.12.8+dfsg-0ubuntu1 [124 kB] 2021-06-03T19:05:14.1224697Z Get:210 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttranslations5-l10n all 5.12.8-0ubuntu1 [1486 kB] 2021-06-03T19:05:14.1608033Z Get:211 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 wpasupplicant amd64 2:2.9-1ubuntu4.3 [1183 kB] 2021-06-03T19:05:14.1797708Z Get:212 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-bin amd64 6.3.1-1 [88.8 kB] 2021-06-03T19:05:14.1814996Z Get:213 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch-data all 20191128-3 [32.3 kB] 2021-06-03T19:05:14.1826710Z Get:214 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch amd64 2.5.2+repack0-2ubuntu3 [53.1 kB] 2021-06-03T19:05:15.5886678Z Fetched 183 MB in 16s (11.6 MB/s) 2021-06-03T19:05:15.6300785Z Selecting previously unselected package libdouble-conversion3:amd64. 2021-06-03T19:05:15.6385904Z (Reading database ... 2021-06-03T19:05:15.6386641Z (Reading database ... 5% 2021-06-03T19:05:15.6387301Z (Reading database ... 10% 2021-06-03T19:05:15.6387920Z (Reading database ... 15% 2021-06-03T19:05:15.6390025Z (Reading database ... 20% 2021-06-03T19:05:15.6390555Z (Reading database ... 25% 2021-06-03T19:05:15.6391054Z (Reading database ... 30% 2021-06-03T19:05:15.6391561Z (Reading database ... 35% 2021-06-03T19:05:15.6392076Z (Reading database ... 40% 2021-06-03T19:05:15.6392596Z (Reading database ... 45% 2021-06-03T19:05:15.6393292Z (Reading database ... 50% 2021-06-03T19:05:15.6491386Z (Reading database ... 55% 2021-06-03T19:05:15.6545309Z (Reading database ... 60% 2021-06-03T19:05:15.6615694Z (Reading database ... 65% 2021-06-03T19:05:15.6681730Z (Reading database ... 70% 2021-06-03T19:05:15.6715181Z (Reading database ... 75% 2021-06-03T19:05:15.6754214Z (Reading database ... 80% 2021-06-03T19:05:15.7124173Z (Reading database ... 85% 2021-06-03T19:05:15.7241577Z (Reading database ... 90% 2021-06-03T19:05:15.7595587Z (Reading database ... 95% 2021-06-03T19:05:15.7596203Z (Reading database ... 100% 2021-06-03T19:05:15.7597041Z (Reading database ... 245672 files and directories currently installed.) 2021-06-03T19:05:15.7706283Z Preparing to unpack .../000-libdouble-conversion3_3.1.5-4ubuntu1_amd64.deb ... 2021-06-03T19:05:15.7733118Z Unpacking libdouble-conversion3:amd64 (3.1.5-4ubuntu1) ... 2021-06-03T19:05:15.8149832Z Selecting previously unselected package libqt5core5a:amd64. 2021-06-03T19:05:15.8404934Z Preparing to unpack .../001-libqt5core5a_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-06-03T19:05:15.8495510Z Unpacking libqt5core5a:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:05:16.0550436Z Selecting previously unselected package libegl-mesa0:amd64. 2021-06-03T19:05:16.0849098Z Preparing to unpack .../002-libegl-mesa0_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-06-03T19:05:16.0863513Z Unpacking libegl-mesa0:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-06-03T19:05:16.1281058Z Selecting previously unselected package libegl1:amd64. 2021-06-03T19:05:16.1531169Z Preparing to unpack .../003-libegl1_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-06-03T19:05:16.1546724Z Unpacking libegl1:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-06-03T19:05:16.1909633Z Selecting previously unselected package libevdev2:amd64. 2021-06-03T19:05:16.2126216Z Preparing to unpack .../004-libevdev2_1.9.0+dfsg-1ubuntu0.1_amd64.deb ... 2021-06-03T19:05:16.2142272Z Unpacking libevdev2:amd64 (1.9.0+dfsg-1ubuntu0.1) ... 2021-06-03T19:05:16.2576935Z Selecting previously unselected package libmtdev1:amd64. 2021-06-03T19:05:16.2823401Z Preparing to unpack .../005-libmtdev1_1.1.5-1.1_amd64.deb ... 2021-06-03T19:05:16.2836893Z Unpacking libmtdev1:amd64 (1.1.5-1.1) ... 2021-06-03T19:05:16.3149851Z Selecting previously unselected package libwacom-common. 2021-06-03T19:05:16.3400887Z Preparing to unpack .../006-libwacom-common_1.3-2ubuntu3_all.deb ... 2021-06-03T19:05:16.3414665Z Unpacking libwacom-common (1.3-2ubuntu3) ... 2021-06-03T19:05:16.4269319Z Selecting previously unselected package libwacom2:amd64. 2021-06-03T19:05:16.4508279Z Preparing to unpack .../007-libwacom2_1.3-2ubuntu3_amd64.deb ... 2021-06-03T19:05:16.4524413Z Unpacking libwacom2:amd64 (1.3-2ubuntu3) ... 2021-06-03T19:05:16.4830205Z Selecting previously unselected package libinput-bin. 2021-06-03T19:05:16.5118749Z Preparing to unpack .../008-libinput-bin_1.15.5-1ubuntu0.2_amd64.deb ... 2021-06-03T19:05:16.5130495Z Unpacking libinput-bin (1.15.5-1ubuntu0.2) ... 2021-06-03T19:05:16.5447407Z Selecting previously unselected package libinput10:amd64. 2021-06-03T19:05:16.5757131Z Preparing to unpack .../009-libinput10_1.15.5-1ubuntu0.2_amd64.deb ... 2021-06-03T19:05:16.5775138Z Unpacking libinput10:amd64 (1.15.5-1ubuntu0.2) ... 2021-06-03T19:05:16.6153163Z Selecting previously unselected package libqt5dbus5:amd64. 2021-06-03T19:05:16.6465621Z Preparing to unpack .../010-libqt5dbus5_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-06-03T19:05:16.6480852Z Unpacking libqt5dbus5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:05:16.7057182Z Selecting previously unselected package libqt5network5:amd64. 2021-06-03T19:05:16.7340149Z Preparing to unpack .../011-libqt5network5_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-06-03T19:05:16.7358672Z Unpacking libqt5network5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:05:16.8349966Z Selecting previously unselected package libxcb-icccm4:amd64. 2021-06-03T19:05:16.8586609Z Preparing to unpack .../012-libxcb-icccm4_0.4.1-1.1_amd64.deb ... 2021-06-03T19:05:16.8597532Z Unpacking libxcb-icccm4:amd64 (0.4.1-1.1) ... 2021-06-03T19:05:16.8909788Z Selecting previously unselected package libxcb-util1:amd64. 2021-06-03T19:05:16.9190542Z Preparing to unpack .../013-libxcb-util1_0.4.0-0ubuntu3_amd64.deb ... 2021-06-03T19:05:16.9202883Z Unpacking libxcb-util1:amd64 (0.4.0-0ubuntu3) ... 2021-06-03T19:05:16.9550402Z Selecting previously unselected package libxcb-image0:amd64. 2021-06-03T19:05:16.9804128Z Preparing to unpack .../014-libxcb-image0_0.4.0-1build1_amd64.deb ... 2021-06-03T19:05:16.9816367Z Unpacking libxcb-image0:amd64 (0.4.0-1build1) ... 2021-06-03T19:05:17.0150087Z Selecting previously unselected package libxcb-keysyms1:amd64. 2021-06-03T19:05:17.0415333Z Preparing to unpack .../015-libxcb-keysyms1_0.4.0-1build1_amd64.deb ... 2021-06-03T19:05:17.0437895Z Unpacking libxcb-keysyms1:amd64 (0.4.0-1build1) ... 2021-06-03T19:05:17.0759944Z Selecting previously unselected package libxcb-randr0:amd64. 2021-06-03T19:05:17.1047635Z Preparing to unpack .../016-libxcb-randr0_1.14-2_amd64.deb ... 2021-06-03T19:05:17.1062147Z Unpacking libxcb-randr0:amd64 (1.14-2) ... 2021-06-03T19:05:17.1391718Z Selecting previously unselected package libxcb-render-util0:amd64. 2021-06-03T19:05:17.1685524Z Preparing to unpack .../017-libxcb-render-util0_0.3.9-1build1_amd64.deb ... 2021-06-03T19:05:17.1706758Z Unpacking libxcb-render-util0:amd64 (0.3.9-1build1) ... 2021-06-03T19:05:17.2029910Z Selecting previously unselected package libxcb-xinerama0:amd64. 2021-06-03T19:05:17.2297026Z Preparing to unpack .../018-libxcb-xinerama0_1.14-2_amd64.deb ... 2021-06-03T19:05:17.2308670Z Unpacking libxcb-xinerama0:amd64 (1.14-2) ... 2021-06-03T19:05:17.2670885Z Selecting previously unselected package libxcb-xinput0:amd64. 2021-06-03T19:05:17.2919069Z Preparing to unpack .../019-libxcb-xinput0_1.14-2_amd64.deb ... 2021-06-03T19:05:17.2937418Z Unpacking libxcb-xinput0:amd64 (1.14-2) ... 2021-06-03T19:05:17.3350513Z Selecting previously unselected package libxcb-xkb1:amd64. 2021-06-03T19:05:17.3577177Z Preparing to unpack .../020-libxcb-xkb1_1.14-2_amd64.deb ... 2021-06-03T19:05:17.3592938Z Unpacking libxcb-xkb1:amd64 (1.14-2) ... 2021-06-03T19:05:17.3989858Z Selecting previously unselected package libxkbcommon-x11-0:amd64. 2021-06-03T19:05:17.4193474Z Preparing to unpack .../021-libxkbcommon-x11-0_0.10.0-1_amd64.deb ... 2021-06-03T19:05:17.4204361Z Unpacking libxkbcommon-x11-0:amd64 (0.10.0-1) ... 2021-06-03T19:05:17.4591014Z Selecting previously unselected package libqt5gui5:amd64. 2021-06-03T19:05:17.4878388Z Preparing to unpack .../022-libqt5gui5_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-06-03T19:05:17.4965192Z Unpacking libqt5gui5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:05:17.8361346Z Selecting previously unselected package libqt5widgets5:amd64. 2021-06-03T19:05:17.8675592Z Preparing to unpack .../023-libqt5widgets5_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-06-03T19:05:17.8688712Z Unpacking libqt5widgets5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:05:18.1309679Z Selecting previously unselected package libqt5svg5:amd64. 2021-06-03T19:05:18.1560609Z Preparing to unpack .../024-libqt5svg5_5.12.8-0ubuntu1_amd64.deb ... 2021-06-03T19:05:18.1580524Z Unpacking libqt5svg5:amd64 (5.12.8-0ubuntu1) ... 2021-06-03T19:05:18.2069471Z Selecting previously unselected package liborc-0.4-0:amd64. 2021-06-03T19:05:18.2280571Z Preparing to unpack .../025-liborc-0.4-0_1%3a0.4.31-1_amd64.deb ... 2021-06-03T19:05:18.2298916Z Unpacking liborc-0.4-0:amd64 (1:0.4.31-1) ... 2021-06-03T19:05:18.2821811Z Selecting previously unselected package libgstreamer-plugins-base1.0-0:amd64. 2021-06-03T19:05:18.3123395Z Preparing to unpack .../026-libgstreamer-plugins-base1.0-0_1.16.2-4ubuntu0.1_amd64.deb ... 2021-06-03T19:05:18.3135906Z Unpacking libgstreamer-plugins-base1.0-0:amd64 (1.16.2-4ubuntu0.1) ... 2021-06-03T19:05:18.4349748Z Selecting previously unselected package libhyphen0:amd64. 2021-06-03T19:05:18.4614200Z Preparing to unpack .../027-libhyphen0_2.8.8-7_amd64.deb ... 2021-06-03T19:05:18.4635163Z Unpacking libhyphen0:amd64 (2.8.8-7) ... 2021-06-03T19:05:18.5030223Z Selecting previously unselected package libqt5positioning5:amd64. 2021-06-03T19:05:18.5313012Z Preparing to unpack .../028-libqt5positioning5_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-06-03T19:05:18.5325912Z Unpacking libqt5positioning5:amd64 (5.12.8+dfsg-0ubuntu1) ... 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Did you mean "=="? 2021-06-03T19:05:58.1918908Z if direction is "increasing": 2021-06-03T19:05:58.1922641Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:179: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-03T19:05:58.1925298Z elif direction is "decreasing": 2021-06-03T19:05:59.2191938Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:460: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-03T19:05:59.2193666Z if props["offset_coordinates"] is "data": 2021-06-03T19:05:59.2195560Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:572: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-06-03T19:05:59.2196879Z if props["coordinates"] is not "data": 2021-06-03T19:06:00.1149957Z Setting up avahi-daemon (0.7-4ubuntu7) ... 2021-06-03T19:06:00.8275731Z Created symlink /etc/systemd/system/dbus-org.freedesktop.Avahi.service → /lib/systemd/system/avahi-daemon.service. 2021-06-03T19:06:00.8279198Z Created symlink /etc/systemd/system/multi-user.target.wants/avahi-daemon.service → /lib/systemd/system/avahi-daemon.service. 2021-06-03T19:06:00.8281517Z Created symlink /etc/systemd/system/sockets.target.wants/avahi-daemon.socket → /lib/systemd/system/avahi-daemon.socket. 2021-06-03T19:06:02.3027485Z Setting up libnss-mdns:amd64 (0.14.1-1ubuntu1) ... 2021-06-03T19:06:02.3070453Z First installation detected... 2021-06-03T19:06:02.3072083Z Checking NSS setup... 2021-06-03T19:06:02.3119516Z Setting up libwacom2:amd64 (1.3-2ubuntu3) ... 2021-06-03T19:06:02.3158159Z Setting up libqt5sql5-sqlite:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:02.3202589Z Setting up python3-owslib (0.19.1-1) ... 2021-06-03T19:06:02.6343875Z Setting up libgdal26 (3.0.4+dfsg-1build3) ... 2021-06-03T19:06:02.6393316Z Setting up libqmi-glib5:amd64 (1.24.8-1) ... 2021-06-03T19:06:02.6429626Z Setting up libpdal-base9 (2.0.1+ds-1build3) ... 2021-06-03T19:06:02.6464026Z Setting up libinput-bin (1.15.5-1ubuntu0.2) ... 2021-06-03T19:06:02.6508811Z Setting up libwacom-bin (1.3-2ubuntu3) ... 2021-06-03T19:06:02.6548335Z Setting up libpdal-plugin-pgpointcloud (2.0.1+ds-1build3) ... 2021-06-03T19:06:02.6594690Z Setting up libpdal-plugin-icebridge (2.0.1+ds-1build3) ... 2021-06-03T19:06:02.6624441Z Setting up libpdal-plugin-python (2.0.1+ds-1build3) ... 2021-06-03T19:06:02.6658527Z Setting up python3-gdal (3.0.4+dfsg-1build3) ... 2021-06-03T19:06:02.8811479Z Setting up libinput10:amd64 (1.15.5-1ubuntu0.2) ... 2021-06-03T19:06:02.8846766Z Setting up libpdal-plugin-faux (2.0.1+ds-1build3) ... 2021-06-03T19:06:02.8881641Z Setting up grass-core (7.8.2-1build3) ... 2021-06-03T19:06:03.2689602Z /usr/lib/grass78/etc/python/grass/pygrass/gis/__init__.py:75: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-03T19:06:03.2692900Z if value is '': 2021-06-03T19:06:03.3800202Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-03T19:06:03.3802864Z if do_profiling is "True" or do_profiling is "1": 2021-06-03T19:06:03.3803901Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-03T19:06:03.3804772Z if do_profiling is "True" or do_profiling is "1": 2021-06-03T19:06:03.3805800Z /usr/lib/grass78/etc/python/grass/temporal/core.py:582: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-06-03T19:06:03.3806891Z if driver_string is not None and driver_string is not "": 2021-06-03T19:06:03.4339456Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-03T19:06:03.4341301Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-06-03T19:06:03.4342869Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-03T19:06:03.4344362Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-06-03T19:06:03.5034558Z Setting up libpdal-plugin-sqlite (2.0.1+ds-1build3) ... 2021-06-03T19:06:03.5064566Z Setting up libqt5gui5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:03.5164750Z Setting up libqmi-proxy (1.24.8-1) ... 2021-06-03T19:06:03.5195981Z Setting up libqt5widgets5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:03.5230341Z Setting up libqt53dcore5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:03.5464469Z Setting up libqt5help5:amd64 (5.12.8-0ubuntu1) ... 2021-06-03T19:06:03.5498723Z Setting up libqt53dlogic5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:03.5538378Z Setting up qt5-gtk-platformtheme:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:03.5575429Z Setting up libqgis-native3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-03T19:06:03.5609549Z Setting up libqt5printsupport5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:03.5636829Z Setting up gdal-bin (3.0.4+dfsg-1build3) ... 2021-06-03T19:06:03.6656992Z Setting up qt5-image-formats-plugins:amd64 (5.12.8-0ubuntu1) ... 2021-06-03T19:06:03.6688994Z Setting up libqt53dinput5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:03.6724069Z Setting up libqt5opengl5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:03.6768741Z Setting up modemmanager (1.12.8-1) ... 2021-06-03T19:06:03.8336922Z Created symlink /etc/systemd/system/dbus-org.freedesktop.ModemManager1.service → /lib/systemd/system/ModemManager.service. 2021-06-03T19:06:03.8339848Z Created symlink /etc/systemd/system/multi-user.target.wants/ModemManager.service → /lib/systemd/system/ModemManager.service. 2021-06-03T19:06:04.5367802Z Setting up libqt5quick5:amd64 (5.12.8-0ubuntu1) ... 2021-06-03T19:06:04.5424057Z Setting up libqt5designer5:amd64 (5.12.8-0ubuntu1) ... 2021-06-03T19:06:04.5471348Z Setting up libpdal-plugins (2.0.1+ds-1build3) ... 2021-06-03T19:06:04.5503813Z Setting up libqt5svg5:amd64 (5.12.8-0ubuntu1) ... 2021-06-03T19:06:04.5534475Z Setting up libqt53drender5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:04.5564513Z Setting up qhelpgenerator-qt5 (5.12.8-0ubuntu1) ... 2021-06-03T19:06:04.5599275Z Setting up libqwt-qt5-6 (6.1.4-1.1build1) ... 2021-06-03T19:06:04.5633059Z Setting up libqscintilla2-qt5-15 (2.11.2+dfsg-6) ... 2021-06-03T19:06:04.5669831Z Setting up libqt5webkit5:amd64 (5.212.0~alpha4-1ubuntu2) ... 2021-06-03T19:06:04.5701192Z Setting up libqt5designercomponents5:amd64 (5.12.8-0ubuntu1) ... 2021-06-03T19:06:04.5752427Z Setting up libqt5quickwidgets5:amd64 (5.12.8-0ubuntu1) ... 2021-06-03T19:06:04.5795665Z Setting up libqgis-core3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-03T19:06:04.5831999Z Setting up libqt53dquickscene2d5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:04.5865530Z Setting up libqgis-gui3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-03T19:06:04.5899610Z Setting up libqgis-analysis3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-03T19:06:04.5937721Z Setting up qt5-assistant (5.12.8-0ubuntu1) ... 2021-06-03T19:06:04.5974296Z Setting up qttools5-dev-tools (5.12.8-0ubuntu1) ... 2021-06-03T19:06:04.6021210Z Setting up libqgispython3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-03T19:06:04.6058403Z Setting up qt3d-scene2d-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:04.6092350Z Setting up python3-pyqt5 (5.14.1+dfsg-3build1) ... 2021-06-03T19:06:04.8042406Z Setting up python3-pyqt5.qtsvg (5.14.1+dfsg-3build1) ... 2021-06-03T19:06:04.8072140Z Setting up libqt53danimation5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:04.8107389Z Setting up qt3d-defaultgeometryloader-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:04.8148629Z Setting up qgis-providers (3.10.4+dfsg-1ubuntu2) ... 2021-06-03T19:06:42.9394259Z Setting up libqt53dextras5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:42.9436618Z Setting up python3-pyqt5.qtsql (5.14.1+dfsg-3build1) ... 2021-06-03T19:06:42.9473711Z Setting up libqgis-customwidgets (3.10.4+dfsg-1ubuntu2) ... 2021-06-03T19:06:42.9510934Z Setting up qt3d-gltfsceneio-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:42.9547318Z Setting up libqgis-server3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-03T19:06:42.9581370Z Setting up libqgisgrass7-3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-03T19:06:42.9615460Z Setting up qt3d-assimpsceneimport-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-03T19:06:42.9650482Z Setting up python3-qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-06-03T19:06:43.1341848Z Setting up libqgis-3d3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-03T19:06:43.1382717Z Setting up python3-pyqt5.qtwebkit (5.14.1+dfsg-3build1) ... 2021-06-03T19:06:43.1418619Z Setting up qgis-provider-grass (3.10.4+dfsg-1ubuntu2) ... 2021-06-03T19:06:43.1450811Z Setting up python3-pyqt5.qsci (2.11.2+dfsg-6) ... 2021-06-03T19:06:43.1486068Z Setting up python3-qgis (3.10.4+dfsg-1ubuntu2) ... 2021-06-03T19:06:43.3457569Z Setting up libqgis-app3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-03T19:06:43.3496358Z Setting up qgis (3.10.4+dfsg-1ubuntu2) ... 2021-06-03T19:06:43.3539794Z Setting up qgis-plugin-grass (3.10.4+dfsg-1ubuntu2) ... 2021-06-03T19:06:43.4046548Z Processing triggers for dbus (1.12.16-2ubuntu2.1) ... 2021-06-03T19:06:43.4303608Z Processing triggers for shared-mime-info (1.15-1) ... 2021-06-03T19:06:44.5744838Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-06-03T19:06:44.5930911Z Processing triggers for mime-support (3.64ubuntu1) ... 2021-06-03T19:06:44.6197203Z Processing triggers for hicolor-icon-theme (0.17-2) ... 2021-06-03T19:06:44.6358973Z Processing triggers for libglib2.0-0:amd64 (2.64.6-1~ubuntu20.04.3) ... 2021-06-03T19:06:44.7541015Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:06:44.7887622Z Processing triggers for systemd (245.4-4ubuntu3.6) ... 2021-06-03T19:06:45.0804069Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:06:58.3210983Z Setting up pinentry-gnome3 (1.1.0-3build1) ... 2021-06-03T19:06:58.3414334Z Setting up gnome-keyring (3.36.0-1ubuntu1) ... 2021-06-03T19:07:00.3293812Z ##[group]Run adigherman/actions/get-repo-name@master 2021-06-03T19:07:00.3295201Z with: 2021-06-03T19:07:00.3296274Z github_slug: neuroconductor/neuroCombatData 2021-06-03T19:07:00.3296830Z env: 2021-06-03T19:07:00.3297283Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:07:00.3297751Z TIC_DEPLOY_KEY: 2021-06-03T19:07:00.3299237Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:07:00.3303213Z GITHUB_PAT: *** 2021-06-03T19:07:00.3304093Z COVERALLS_TOKEN: *** 2021-06-03T19:07:00.3304586Z continue-on-error: false 2021-06-03T19:07:00.3305049Z VDIFFR_RUN_TESTS: 2021-06-03T19:07:00.3305531Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-03T19:07:00.3306159Z TZ: UTC 2021-06-03T19:07:00.3308216Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-03T19:07:00.3308725Z NOT_CRAN: true 2021-06-03T19:07:00.3309369Z ##[endgroup] 2021-06-03T19:07:00.3710505Z repo slug is: neuroconductor/neuroCombatData 2021-06-03T19:07:00.3820244Z ##[group]Run adigherman/actions/get-repo-version@master 2021-06-03T19:07:00.3820851Z env: 2021-06-03T19:07:00.3821290Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:07:00.3821920Z TIC_DEPLOY_KEY: 2021-06-03T19:07:00.3823141Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:07:00.3824597Z GITHUB_PAT: *** 2021-06-03T19:07:00.3825490Z COVERALLS_TOKEN: *** 2021-06-03T19:07:00.3826039Z continue-on-error: false 2021-06-03T19:07:00.3826551Z VDIFFR_RUN_TESTS: 2021-06-03T19:07:00.3827253Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-03T19:07:00.3827729Z TZ: UTC 2021-06-03T19:07:00.3828872Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-03T19:07:00.3829290Z NOT_CRAN: true 2021-06-03T19:07:00.3829637Z ##[endgroup] 2021-06-03T19:07:00.5931429Z ##[group]Run adigherman/actions/get-release-asset@master 2021-06-03T19:07:00.5932175Z with: 2021-06-03T19:07:00.5932611Z repo_name: neuroCombatData 2021-06-03T19:07:00.5933063Z repo_version: 0.99.0 2021-06-03T19:07:00.5933461Z runner_os: Linux 2021-06-03T19:07:00.5933839Z R_version: 3.5 2021-06-03T19:07:00.5934175Z env: 2021-06-03T19:07:00.5934611Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:07:00.5935059Z TIC_DEPLOY_KEY: 2021-06-03T19:07:00.5935855Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:07:00.5937634Z GITHUB_PAT: *** 2021-06-03T19:07:00.5938444Z COVERALLS_TOKEN: *** 2021-06-03T19:07:00.5938942Z continue-on-error: false 2021-06-03T19:07:00.5939421Z VDIFFR_RUN_TESTS: 2021-06-03T19:07:00.5940048Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-03T19:07:00.5940483Z TZ: UTC 2021-06-03T19:07:00.5940846Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-03T19:07:00.5941248Z NOT_CRAN: true 2021-06-03T19:07:00.5941627Z ##[endgroup] 2021-06-03T19:07:00.6413321Z Package: neuroCombatData 2021-06-03T19:07:00.6421083Z Version: 0.99.0 2021-06-03T19:07:00.6422945Z OS: Linux 2021-06-03T19:07:00.6485304Z ##[group]Run install.packages('remotes') 2021-06-03T19:07:00.6485980Z install.packages('remotes') 2021-06-03T19:07:00.6486778Z saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) 2021-06-03T19:07:00.6487675Z writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") 2021-06-03T19:07:00.6495449Z shell: /usr/local/bin/Rscript {0} 2021-06-03T19:07:00.6495842Z env: 2021-06-03T19:07:00.6496255Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:07:00.6497019Z TIC_DEPLOY_KEY: 2021-06-03T19:07:00.6498152Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:07:00.6499411Z GITHUB_PAT: *** 2021-06-03T19:07:00.6502991Z COVERALLS_TOKEN: *** 2021-06-03T19:07:00.6503571Z continue-on-error: false 2021-06-03T19:07:00.6504439Z VDIFFR_RUN_TESTS: 2021-06-03T19:07:00.6505037Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-03T19:07:00.6505555Z TZ: UTC 2021-06-03T19:07:00.6505995Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-03T19:07:00.6506449Z NOT_CRAN: true 2021-06-03T19:07:00.6506875Z ##[endgroup] 2021-06-03T19:07:00.8282088Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-06-03T19:07:00.8282929Z (as ‘lib’ is unspecified) 2021-06-03T19:07:19.1536214Z trying URL 'https://cloud.r-project.org/src/contrib/remotes_2.4.0.tar.gz' 2021-06-03T19:07:19.1996723Z Content type 'application/x-gzip' length 149836 bytes (146 KB) 2021-06-03T19:07:19.2145259Z ================================================== 2021-06-03T19:07:19.2145779Z downloaded 146 KB 2021-06-03T19:07:19.2146075Z 2021-06-03T19:07:19.5194666Z * installing *source* package ‘remotes’ ... 2021-06-03T19:07:19.5240286Z ** package ‘remotes’ successfully unpacked and MD5 sums checked 2021-06-03T19:07:19.5435274Z ** R 2021-06-03T19:07:19.5712357Z ** inst 2021-06-03T19:07:19.5725728Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:07:21.3432048Z ** help 2021-06-03T19:07:21.4345427Z *** installing help indices 2021-06-03T19:07:21.5060846Z ** building package indices 2021-06-03T19:07:21.5696652Z ** installing vignettes 2021-06-03T19:07:21.5755843Z ** testing if installed package can be loaded 2021-06-03T19:07:21.7664030Z * DONE (remotes) 2021-06-03T19:07:21.7709217Z 2021-06-03T19:07:21.7710072Z The downloaded source packages are in 2021-06-03T19:07:21.7711903Z ‘/tmp/RtmpWddz8T/downloaded_packages’ 2021-06-03T19:07:41.9366841Z ##[group]Run actions/cache@v1 2021-06-03T19:07:41.9367260Z with: 2021-06-03T19:07:41.9367666Z path: /home/runner/work/_temp/Library 2021-06-03T19:07:41.9370509Z key: Linux-2e7742fb4e078f3534d94dc0dec3f866c8c4a14293f49c24c0013aac36169a0f-1-222d733f1cc32fba78a8d7ceacb01136d96c5d49822007a66ea742ef22ff32e5 2021-06-03T19:07:41.9373855Z restore-keys: Linux-2e7742fb4e078f3534d94dc0dec3f866c8c4a14293f49c24c0013aac36169a0f-1- 2021-06-03T19:07:41.9375183Z env: 2021-06-03T19:07:41.9376146Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:07:41.9376545Z TIC_DEPLOY_KEY: 2021-06-03T19:07:41.9377257Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:07:41.9379110Z GITHUB_PAT: *** 2021-06-03T19:07:41.9380827Z COVERALLS_TOKEN: *** 2021-06-03T19:07:41.9381293Z continue-on-error: false 2021-06-03T19:07:41.9381702Z VDIFFR_RUN_TESTS: 2021-06-03T19:07:41.9382101Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-03T19:07:41.9382545Z TZ: UTC 2021-06-03T19:07:41.9383051Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-03T19:07:41.9383576Z NOT_CRAN: true 2021-06-03T19:07:41.9383900Z ##[endgroup] 2021-06-03T19:07:41.9806901Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-06-03T19:07:41.9859735Z ##[group]Run Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-06-03T19:07:41.9860434Z Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-06-03T19:07:41.9861053Z sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") 2021-06-03T19:07:41.9861571Z sudo -s eval "$sysreqs" 2021-06-03T19:07:41.9898086Z shell: /usr/bin/bash -e {0} 2021-06-03T19:07:41.9898592Z env: 2021-06-03T19:07:41.9898978Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:07:41.9899389Z TIC_DEPLOY_KEY: 2021-06-03T19:07:41.9900066Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:07:41.9901175Z GITHUB_PAT: *** 2021-06-03T19:07:41.9901873Z COVERALLS_TOKEN: *** 2021-06-03T19:07:41.9902292Z continue-on-error: false 2021-06-03T19:07:41.9902707Z VDIFFR_RUN_TESTS: 2021-06-03T19:07:41.9903276Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-03T19:07:41.9903641Z TZ: UTC 2021-06-03T19:07:41.9903973Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-03T19:07:41.9904320Z NOT_CRAN: true 2021-06-03T19:07:41.9904694Z RHUB_PLATFORM: linux-x86_64-ubuntu-gcc 2021-06-03T19:07:41.9905096Z ##[endgroup] 2021-06-03T19:07:42.1623605Z Using github PAT from envvar GITHUB_PAT 2021-06-03T19:07:42.6466279Z Downloading GitHub repo r-hub/sysreqs@HEAD 2021-06-03T19:08:03.2738558Z rprojroot (NA -> 2.0.2) [CRAN] 2021-06-03T19:08:03.2739275Z crayon (NA -> 1.4.1) [CRAN] 2021-06-03T19:08:03.2740016Z R6 (NA -> 2.5.0) [CRAN] 2021-06-03T19:08:03.2740559Z desc (NA -> 1.3.0) [CRAN] 2021-06-03T19:08:03.2741113Z debugme (NA -> 1.1.0) [CRAN] 2021-06-03T19:08:03.2762831Z Installing 5 packages: rprojroot, crayon, R6, desc, debugme 2021-06-03T19:08:03.2782020Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-06-03T19:08:03.2782853Z (as ‘lib’ is unspecified) 2021-06-03T19:08:20.9448142Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rprojroot_2.0.2.tar.gz' 2021-06-03T19:08:22.4008753Z Content type 'binary/octet-stream' length 96231 bytes (93 KB) 2021-06-03T19:08:22.5161224Z ================================================== 2021-06-03T19:08:22.5161849Z downloaded 93 KB 2021-06-03T19:08:22.5162271Z 2021-06-03T19:08:22.5205003Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/crayon_1.4.1.tar.gz' 2021-06-03T19:08:24.0591508Z Content type 'binary/octet-stream' length 137956 bytes (134 KB) 2021-06-03T19:08:24.0695124Z ================================================== 2021-06-03T19:08:24.0695964Z downloaded 134 KB 2021-06-03T19:08:24.0696273Z 2021-06-03T19:08:24.0734461Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R6_2.5.0.tar.gz' 2021-06-03T19:08:25.5165726Z Content type 'binary/octet-stream' length 81754 bytes (79 KB) 2021-06-03T19:08:25.5167832Z ================================================== 2021-06-03T19:08:25.5168555Z downloaded 79 KB 2021-06-03T19:08:25.5169061Z 2021-06-03T19:08:25.5206089Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/desc_1.3.0.tar.gz' 2021-06-03T19:08:27.0391041Z Content type 'binary/octet-stream' length 528350 bytes (515 KB) 2021-06-03T19:08:27.3627288Z ================================================== 2021-06-03T19:08:27.3629442Z downloaded 515 KB 2021-06-03T19:08:27.3630322Z 2021-06-03T19:08:27.3665984Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/debugme_1.1.0.tar.gz' 2021-06-03T19:08:28.6927504Z Content type 'binary/octet-stream' length 1015031 bytes (991 KB) 2021-06-03T19:08:29.0783949Z ================================================== 2021-06-03T19:08:29.0784466Z downloaded 991 KB 2021-06-03T19:08:29.0784757Z 2021-06-03T19:08:29.3525507Z * installing *binary* package ‘rprojroot’ ... 2021-06-03T19:08:29.3573606Z * DONE (rprojroot) 2021-06-03T19:08:29.5727551Z * installing *binary* package ‘crayon’ ... 2021-06-03T19:08:29.5780109Z * DONE (crayon) 2021-06-03T19:08:29.8023834Z * installing *binary* package ‘R6’ ... 2021-06-03T19:08:29.8066079Z * DONE (R6) 2021-06-03T19:08:30.0653786Z * installing *binary* package ‘desc’ ... 2021-06-03T19:08:30.0707575Z * DONE (desc) 2021-06-03T19:08:30.3270518Z * installing *binary* package ‘debugme’ ... 2021-06-03T19:08:30.3320576Z * DONE (debugme) 2021-06-03T19:08:30.3378192Z 2021-06-03T19:08:30.3379126Z The downloaded source packages are in 2021-06-03T19:08:30.3380457Z ‘/tmp/RtmpWtk2lz/downloaded_packages’ 2021-06-03T19:08:30.3392655Z Running `R CMD build`... 2021-06-03T19:08:30.6092987Z * checking for file ‘/tmp/RtmpWtk2lz/remotes651168c68cb3/r-hub-sysreqs-f068afa/DESCRIPTION’ ... OK 2021-06-03T19:08:30.6095061Z * preparing ‘sysreqs’: 2021-06-03T19:08:30.6096542Z * checking DESCRIPTION meta-information ... OK 2021-06-03T19:08:30.6098052Z * checking for LF line-endings in source and make files and shell scripts 2021-06-03T19:08:30.6099263Z * checking for empty or unneeded directories 2021-06-03T19:08:30.6100509Z * building ‘sysreqs_1.0.0.9000.tar.gz’ 2021-06-03T19:08:30.6105613Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-06-03T19:08:30.6106917Z (as ‘lib’ is unspecified) 2021-06-03T19:08:30.8334563Z * installing *source* package ‘sysreqs’ ... 2021-06-03T19:08:30.8485883Z ** R 2021-06-03T19:08:30.8580910Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:08:31.0479411Z ** help 2021-06-03T19:08:31.0596928Z *** installing help indices 2021-06-03T19:08:31.0795737Z ** building package indices 2021-06-03T19:08:31.0915381Z ** testing if installed package can be loaded 2021-06-03T19:08:31.3029291Z * DONE (sysreqs) 2021-06-03T19:08:53.1129804Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-06-03T19:08:53.1133408Z Hit:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease 2021-06-03T19:08:53.1137457Z Hit:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease 2021-06-03T19:08:53.1686102Z Hit:4 http://security.ubuntu.com/ubuntu focal-security InRelease 2021-06-03T19:08:53.2146209Z Hit:5 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease 2021-06-03T19:08:53.3034236Z Hit:6 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease 2021-06-03T19:08:53.5838112Z Hit:7 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-06-03T19:08:54.8719366Z Reading package lists... 2021-06-03T19:08:54.9582072Z Reading package lists... 2021-06-03T19:08:55.1075156Z Building dependency tree... 2021-06-03T19:08:55.1098160Z Reading state information... 2021-06-03T19:08:55.2707242Z libicu-dev is already the newest version (66.1-2ubuntu2). 2021-06-03T19:08:55.2709512Z libicu-dev set to manually installed. 2021-06-03T19:08:55.2711415Z libssl-dev is already the newest version (1.1.1f-1ubuntu2.4). 2021-06-03T19:08:55.2712516Z pandoc is already the newest version (2.7.3-1). 2021-06-03T19:08:55.2713427Z The following additional packages will be installed: 2021-06-03T19:08:55.2714724Z libbibutils6 libghc-pandoc-citeproc-data 2021-06-03T19:08:55.2715612Z Suggested packages: 2021-06-03T19:08:55.2716698Z libcurl4-doc libidn11-dev libldap2-dev librtmp-dev 2021-06-03T19:08:55.3429247Z The following NEW packages will be installed: 2021-06-03T19:08:55.3432472Z libbibutils6 libcurl4-openssl-dev libghc-pandoc-citeproc-data 2021-06-03T19:08:55.3434601Z pandoc-citeproc 2021-06-03T19:08:55.5102711Z 0 upgraded, 4 newly installed, 0 to remove and 36 not upgraded. 2021-06-03T19:08:55.5103510Z Need to get 13.7 MB of archives. 2021-06-03T19:08:55.5104331Z After this operation, 109 MB of additional disk space will be used. 2021-06-03T19:08:55.5107782Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbibutils6 amd64 6.2-1 [365 kB] 2021-06-03T19:08:55.5182826Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcurl4-openssl-dev amd64 7.68.0-1ubuntu2.5 [321 kB] 2021-06-03T19:08:55.5239951Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libghc-pandoc-citeproc-data all 0.15.0.1-1build4 [51.1 kB] 2021-06-03T19:08:55.5260204Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 pandoc-citeproc amd64 0.15.0.1-1build4 [12.9 MB] 2021-06-03T19:08:56.2616110Z Fetched 13.7 MB in 0s (32.3 MB/s) 2021-06-03T19:08:56.2971681Z Selecting previously unselected package libbibutils6. 2021-06-03T19:08:56.3070400Z (Reading database ... 2021-06-03T19:08:56.3072254Z (Reading database ... 5% 2021-06-03T19:08:56.3073215Z (Reading database ... 10% 2021-06-03T19:08:56.3074036Z (Reading database ... 15% 2021-06-03T19:08:56.3074977Z (Reading database ... 20% 2021-06-03T19:08:56.3075961Z (Reading database ... 25% 2021-06-03T19:08:56.3076705Z (Reading database ... 30% 2021-06-03T19:08:56.3077407Z (Reading database ... 35% 2021-06-03T19:08:56.3078196Z (Reading database ... 40% 2021-06-03T19:08:56.3078929Z (Reading database ... 45% 2021-06-03T19:08:56.3079631Z (Reading database ... 50% 2021-06-03T19:08:56.3174518Z (Reading database ... 55% 2021-06-03T19:08:56.3218738Z (Reading database ... 60% 2021-06-03T19:08:56.3292516Z (Reading database ... 65% 2021-06-03T19:08:56.3323887Z (Reading database ... 70% 2021-06-03T19:08:56.3364218Z (Reading database ... 75% 2021-06-03T19:08:56.3693383Z (Reading database ... 80% 2021-06-03T19:08:56.3728764Z (Reading database ... 85% 2021-06-03T19:08:56.3864772Z (Reading database ... 90% 2021-06-03T19:08:56.4230394Z (Reading database ... 95% 2021-06-03T19:08:56.4230970Z (Reading database ... 100% 2021-06-03T19:08:56.4231779Z (Reading database ... 260883 files and directories currently installed.) 2021-06-03T19:08:56.4363675Z Preparing to unpack .../libbibutils6_6.2-1_amd64.deb ... 2021-06-03T19:08:56.4409513Z Unpacking libbibutils6 (6.2-1) ... 2021-06-03T19:08:56.5190050Z Selecting previously unselected package libcurl4-openssl-dev:amd64. 2021-06-03T19:08:56.5461394Z Preparing to unpack .../libcurl4-openssl-dev_7.68.0-1ubuntu2.5_amd64.deb ... 2021-06-03T19:08:56.5474964Z Unpacking libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-06-03T19:08:56.6110037Z Selecting previously unselected package libghc-pandoc-citeproc-data. 2021-06-03T19:08:56.6378812Z Preparing to unpack .../libghc-pandoc-citeproc-data_0.15.0.1-1build4_all.deb ... 2021-06-03T19:08:56.6391900Z Unpacking libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-06-03T19:08:56.6750346Z Selecting previously unselected package pandoc-citeproc. 2021-06-03T19:08:56.7039639Z Preparing to unpack .../pandoc-citeproc_0.15.0.1-1build4_amd64.deb ... 2021-06-03T19:08:56.7053041Z Unpacking pandoc-citeproc (0.15.0.1-1build4) ... 2021-06-03T19:08:56.7084821Z Replaced by files in installed package pandoc (2.7.3-1) ... 2021-06-03T19:08:58.2582619Z Setting up libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-06-03T19:08:58.2623941Z Setting up libbibutils6 (6.2-1) ... 2021-06-03T19:08:58.2657128Z Setting up libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-06-03T19:08:58.2688225Z Setting up pandoc-citeproc (0.15.0.1-1build4) ... 2021-06-03T19:08:58.2740254Z Processing triggers for man-db (2.9.1-1) ... 2021-06-03T19:09:01.8028658Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-03T19:09:03.8735971Z ##[group]Run remotes::install_github("ropensci/tic") 2021-06-03T19:09:03.8736959Z remotes::install_github("ropensci/tic") 2021-06-03T19:09:03.8737989Z remotes::install_github("muschellij2/ghtravis") 2021-06-03T19:09:03.8739043Z remotes::install_github("muschellij2/aghast") 2021-06-03T19:09:03.8739699Z remotes::install_cran("covr") 2021-06-03T19:09:03.8747215Z shell: /usr/local/bin/Rscript {0} 2021-06-03T19:09:03.8747654Z env: 2021-06-03T19:09:03.8748382Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:09:03.8748880Z TIC_DEPLOY_KEY: 2021-06-03T19:09:03.8749743Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:09:03.8751465Z GITHUB_PAT: *** 2021-06-03T19:09:03.8752461Z COVERALLS_TOKEN: *** 2021-06-03T19:09:03.8752978Z continue-on-error: false 2021-06-03T19:09:03.8753486Z VDIFFR_RUN_TESTS: 2021-06-03T19:09:03.8753985Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-03T19:09:03.8754490Z TZ: UTC 2021-06-03T19:09:03.8755072Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-03T19:09:03.8755499Z NOT_CRAN: true 2021-06-03T19:09:03.8755871Z ##[endgroup] 2021-06-03T19:09:04.0959550Z Using github PAT from envvar GITHUB_PAT 2021-06-03T19:09:04.6465943Z Downloading GitHub repo ropensci/tic@HEAD 2021-06-03T19:09:24.9284148Z rlang (NA -> 0.4.11) [CRAN] 2021-06-03T19:09:24.9285911Z magrittr (NA -> 2.0.1 ) [CRAN] 2021-06-03T19:09:24.9286853Z glue (NA -> 1.4.2 ) [CRAN] 2021-06-03T19:09:24.9288017Z sys (NA -> 3.4 ) [CRAN] 2021-06-03T19:09:24.9289072Z askpass (NA -> 1.1 ) [CRAN] 2021-06-03T19:09:24.9290106Z openssl (NA -> 1.4.4 ) [CRAN] 2021-06-03T19:09:24.9291870Z mime (NA -> 0.10 ) [CRAN] 2021-06-03T19:09:24.9292694Z curl (NA -> 4.3.1 ) [CRAN] 2021-06-03T19:09:24.9293506Z jsonlite (NA -> 1.7.2 ) [CRAN] 2021-06-03T19:09:24.9294321Z ini (NA -> 0.3.1 ) [CRAN] 2021-06-03T19:09:24.9295311Z httr (NA -> 1.4.2 ) [CRAN] 2021-06-03T19:09:24.9297343Z gitcreds (NA -> 0.1.1 ) [CRAN] 2021-06-03T19:09:24.9298402Z cli (NA -> 2.5.0 ) [CRAN] 2021-06-03T19:09:24.9299447Z zip (NA -> 2.2.0 ) [CRAN] 2021-06-03T19:09:24.9300516Z rstudioapi (NA -> 0.13 ) [CRAN] 2021-06-03T19:09:24.9301466Z credentials (NA -> 1.3.0 ) [CRAN] 2021-06-03T19:09:24.9302498Z fastmap (NA -> 1.1.0 ) [CRAN] 2021-06-03T19:09:24.9303354Z yaml (NA -> 2.2.1 ) [CRAN] 2021-06-03T19:09:24.9304175Z withr (NA -> 2.4.2 ) [CRAN] 2021-06-03T19:09:24.9305031Z whisker (NA -> 0.4 ) [CRAN] 2021-06-03T19:09:24.9305996Z rappdirs (NA -> 0.3.3 ) [CRAN] 2021-06-03T19:09:24.9306862Z purrr (NA -> 0.3.4 ) [CRAN] 2021-06-03T19:09:24.9307730Z lifecycle (NA -> 1.0.0 ) [CRAN] 2021-06-03T19:09:24.9308808Z gh (NA -> 1.3.0 ) [CRAN] 2021-06-03T19:09:24.9309744Z gert (NA -> 1.3.0 ) [CRAN] 2021-06-03T19:09:24.9310736Z fs (NA -> 1.5.0 ) [CRAN] 2021-06-03T19:09:24.9311524Z clipr (NA -> 0.7.1 ) [CRAN] 2021-06-03T19:09:24.9312424Z cachem (NA -> 1.0.5 ) [CRAN] 2021-06-03T19:09:24.9313250Z usethis (NA -> 2.0.1 ) [CRAN] 2021-06-03T19:09:24.9314087Z memoise (NA -> 2.0.0 ) [CRAN] 2021-06-03T19:09:24.9315088Z git2r (NA -> 0.28.0) [CRAN] 2021-06-03T19:09:24.9516592Z Installing 31 packages: rlang, magrittr, glue, sys, askpass, openssl, mime, curl, jsonlite, ini, httr, gitcreds, cli, zip, rstudioapi, credentials, fastmap, yaml, withr, whisker, rappdirs, purrr, lifecycle, gh, gert, fs, clipr, cachem, usethis, memoise, git2r 2021-06-03T19:09:24.9529652Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-06-03T19:09:24.9530555Z (as ‘lib’ is unspecified) 2021-06-03T19:09:41.8002192Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rlang_0.4.11.tar.gz' 2021-06-03T19:09:43.2556670Z Content type 'binary/octet-stream' length 1389190 bytes (1.3 MB) 2021-06-03T19:09:43.6002392Z ================================================== 2021-06-03T19:09:43.6004363Z downloaded 1.3 MB 2021-06-03T19:09:43.6006420Z 2021-06-03T19:09:43.6039620Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/magrittr_2.0.1.tar.gz' 2021-06-03T19:09:48.0664391Z Content type 'binary/octet-stream' length 231600 bytes (226 KB) 2021-06-03T19:09:48.2474356Z ================================================== 2021-06-03T19:09:48.2474917Z downloaded 226 KB 2021-06-03T19:09:48.2475207Z 2021-06-03T19:09:48.2516376Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/glue_1.4.2.tar.gz' 2021-06-03T19:09:49.6581992Z Content type 'binary/octet-stream' length 143742 bytes (140 KB) 2021-06-03T19:09:49.7823509Z ================================================== 2021-06-03T19:09:49.7824613Z downloaded 140 KB 2021-06-03T19:09:49.7825157Z 2021-06-03T19:09:49.7865187Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sys_3.4.tar.gz' 2021-06-03T19:09:51.2866784Z Content type 'binary/octet-stream' length 54882 bytes (53 KB) 2021-06-03T19:09:51.2868793Z ================================================== 2021-06-03T19:09:51.2869458Z downloaded 53 KB 2021-06-03T19:09:51.2869914Z 2021-06-03T19:09:51.2907762Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/askpass_1.1.tar.gz' 2021-06-03T19:09:52.6878818Z Content type 'binary/octet-stream' length 23519 bytes (22 KB) 2021-06-03T19:09:52.6880518Z ================================================== 2021-06-03T19:09:52.6881333Z downloaded 22 KB 2021-06-03T19:09:52.6881959Z 2021-06-03T19:09:52.6916064Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/openssl_1.4.4.tar.gz' 2021-06-03T19:09:53.9810695Z Content type 'binary/octet-stream' length 1490558 bytes (1.4 MB) 2021-06-03T19:09:54.0103380Z ================================================== 2021-06-03T19:09:54.0104404Z downloaded 1.4 MB 2021-06-03T19:09:54.0104906Z 2021-06-03T19:09:54.0143019Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/mime_0.10.tar.gz' 2021-06-03T19:09:55.3170235Z Content type 'binary/octet-stream' length 37505 bytes (36 KB) 2021-06-03T19:09:55.3176109Z ================================================== 2021-06-03T19:09:55.3177113Z downloaded 36 KB 2021-06-03T19:09:55.3177417Z 2021-06-03T19:09:55.3211773Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/curl_4.3.1.tar.gz' 2021-06-03T19:09:56.8213545Z Content type 'binary/octet-stream' length 904784 bytes (883 KB) 2021-06-03T19:09:56.8572023Z ================================================== 2021-06-03T19:09:56.8573028Z downloaded 883 KB 2021-06-03T19:09:56.8573592Z 2021-06-03T19:09:56.8611347Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/jsonlite_1.7.2.tar.gz' 2021-06-03T19:09:58.1812190Z Content type 'binary/octet-stream' length 535092 bytes (522 KB) 2021-06-03T19:09:58.2014966Z ================================================== 2021-06-03T19:09:58.2015667Z downloaded 522 KB 2021-06-03T19:09:58.2016002Z 2021-06-03T19:09:58.2059740Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ini_0.3.1.tar.gz' 2021-06-03T19:09:59.6137598Z Content type 'binary/octet-stream' length 12966 bytes (12 KB) 2021-06-03T19:09:59.6139072Z ================================================== 2021-06-03T19:09:59.6139854Z downloaded 12 KB 2021-06-03T19:09:59.6140488Z 2021-06-03T19:09:59.6180231Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/httr_1.4.2.tar.gz' 2021-06-03T19:10:00.8465485Z Content type 'binary/octet-stream' length 493580 bytes (482 KB) 2021-06-03T19:10:00.8657784Z ================================================== 2021-06-03T19:10:00.8659067Z downloaded 482 KB 2021-06-03T19:10:00.8659785Z 2021-06-03T19:10:00.8698359Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gitcreds_0.1.1.tar.gz' 2021-06-03T19:10:02.7259608Z Content type 'binary/octet-stream' length 92952 bytes (90 KB) 2021-06-03T19:10:02.8505072Z ================================================== 2021-06-03T19:10:02.8506327Z downloaded 90 KB 2021-06-03T19:10:02.8507164Z 2021-06-03T19:10:02.8547587Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cli_2.5.0.tar.gz' 2021-06-03T19:10:05.1157534Z Content type 'binary/octet-stream' length 515538 bytes (503 KB) 2021-06-03T19:10:05.3561767Z ================================================== 2021-06-03T19:10:05.3562313Z downloaded 503 KB 2021-06-03T19:10:05.3562616Z 2021-06-03T19:10:05.3602461Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/zip_2.2.0.tar.gz' 2021-06-03T19:10:06.7123214Z Content type 'binary/octet-stream' length 636548 bytes (621 KB) 2021-06-03T19:10:07.0723126Z ================================================== 2021-06-03T19:10:07.0724556Z downloaded 621 KB 2021-06-03T19:10:07.0725172Z 2021-06-03T19:10:07.0760919Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rstudioapi_0.13.tar.gz' 2021-06-03T19:10:08.5368623Z Content type 'binary/octet-stream' length 272111 bytes (265 KB) 2021-06-03T19:10:08.7793137Z ================================================== 2021-06-03T19:10:08.7795241Z downloaded 265 KB 2021-06-03T19:10:08.7796048Z 2021-06-03T19:10:08.7832501Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/credentials_1.3.0.tar.gz' 2021-06-03T19:10:10.2306809Z Content type 'binary/octet-stream' length 170965 bytes (166 KB) 2021-06-03T19:10:10.3112395Z ================================================== 2021-06-03T19:10:10.3113549Z downloaded 166 KB 2021-06-03T19:10:10.3113983Z 2021-06-03T19:10:10.3155991Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fastmap_1.1.0.tar.gz' 2021-06-03T19:10:11.7216858Z Content type 'binary/octet-stream' length 240708 bytes (235 KB) 2021-06-03T19:10:11.9000647Z ================================================== 2021-06-03T19:10:11.9002146Z downloaded 235 KB 2021-06-03T19:10:11.9002589Z 2021-06-03T19:10:11.9053490Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/yaml_2.2.1.tar.gz' 2021-06-03T19:10:13.8131235Z Content type 'binary/octet-stream' length 283501 bytes (276 KB) 2021-06-03T19:10:13.8286751Z ================================================== 2021-06-03T19:10:13.8288378Z downloaded 276 KB 2021-06-03T19:10:13.8288866Z 2021-06-03T19:10:13.8331455Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/withr_2.4.2.tar.gz' 2021-06-03T19:10:14.9687936Z Content type 'binary/octet-stream' length 207784 bytes (202 KB) 2021-06-03T19:10:14.9814662Z ================================================== 2021-06-03T19:10:14.9815607Z downloaded 202 KB 2021-06-03T19:10:14.9819526Z 2021-06-03T19:10:14.9858777Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/whisker_0.4.tar.gz' 2021-06-03T19:10:16.7245484Z Content type 'binary/octet-stream' length 65438 bytes (63 KB) 2021-06-03T19:10:16.8693832Z ================================================== 2021-06-03T19:10:16.8695050Z downloaded 63 KB 2021-06-03T19:10:16.8695873Z 2021-06-03T19:10:16.8744698Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rappdirs_0.3.3.tar.gz' 2021-06-03T19:10:18.0619935Z Content type 'binary/octet-stream' length 47021 bytes (45 KB) 2021-06-03T19:10:18.2000632Z ================================================== 2021-06-03T19:10:18.2001203Z downloaded 45 KB 2021-06-03T19:10:18.2001820Z 2021-06-03T19:10:18.2042769Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/purrr_0.3.4.tar.gz' 2021-06-03T19:10:19.4935073Z Content type 'binary/octet-stream' length 425353 bytes (415 KB) 2021-06-03T19:10:19.8508451Z ================================================== 2021-06-03T19:10:19.8509326Z downloaded 415 KB 2021-06-03T19:10:19.8509634Z 2021-06-03T19:10:19.8547720Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lifecycle_1.0.0.tar.gz' 2021-06-03T19:10:21.0269518Z Content type 'binary/octet-stream' length 93062 bytes (90 KB) 2021-06-03T19:10:21.1532733Z ================================================== 2021-06-03T19:10:21.1534605Z downloaded 90 KB 2021-06-03T19:10:21.1535178Z 2021-06-03T19:10:21.1575806Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gh_1.3.0.tar.gz' 2021-06-03T19:10:22.3599866Z Content type 'binary/octet-stream' length 136080 bytes (132 KB) 2021-06-03T19:10:22.5523086Z ================================================== 2021-06-03T19:10:22.5525307Z downloaded 132 KB 2021-06-03T19:10:22.5526267Z 2021-06-03T19:10:22.5566084Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gert_1.3.0.tar.gz' 2021-06-03T19:10:24.4064268Z Content type 'binary/octet-stream' length 277064 bytes (270 KB) 2021-06-03T19:10:24.6849761Z ================================================== 2021-06-03T19:10:24.6851265Z downloaded 270 KB 2021-06-03T19:10:24.6851842Z 2021-06-03T19:10:24.6892197Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fs_1.5.0.tar.gz' 2021-06-03T19:10:27.1479268Z Content type 'binary/octet-stream' length 753885 bytes (736 KB) 2021-06-03T19:10:27.3673401Z ================================================== 2021-06-03T19:10:27.3674219Z downloaded 736 KB 2021-06-03T19:10:27.3674503Z 2021-06-03T19:10:27.3713446Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/clipr_0.7.1.tar.gz' 2021-06-03T19:10:28.8899256Z Content type 'binary/octet-stream' length 47030 bytes (45 KB) 2021-06-03T19:10:29.0327644Z ================================================== 2021-06-03T19:10:29.0328218Z downloaded 45 KB 2021-06-03T19:10:29.0328498Z 2021-06-03T19:10:29.0376873Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cachem_1.0.5.tar.gz' 2021-06-03T19:10:30.3848418Z Content type 'binary/octet-stream' length 68487 bytes (66 KB) 2021-06-03T19:10:30.3987062Z ================================================== 2021-06-03T19:10:30.3988435Z downloaded 66 KB 2021-06-03T19:10:30.3989252Z 2021-06-03T19:10:30.4031360Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/usethis_2.0.1.tar.gz' 2021-06-03T19:10:31.8527396Z Content type 'binary/octet-stream' length 701189 bytes (684 KB) 2021-06-03T19:10:32.1296084Z ================================================== 2021-06-03T19:10:32.1297104Z downloaded 684 KB 2021-06-03T19:10:32.1297589Z 2021-06-03T19:10:32.1335429Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/memoise_2.0.0.tar.gz' 2021-06-03T19:10:33.4841278Z Content type 'binary/octet-stream' length 46738 bytes (45 KB) 2021-06-03T19:10:33.6449882Z ================================================== 2021-06-03T19:10:33.6450915Z downloaded 45 KB 2021-06-03T19:10:33.6451365Z 2021-06-03T19:10:33.6485183Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/git2r_0.28.0.tar.gz' 2021-06-03T19:10:35.4597747Z Content type 'binary/octet-stream' length 613293 bytes (598 KB) 2021-06-03T19:10:35.7555848Z ================================================== 2021-06-03T19:10:35.7558333Z downloaded 598 KB 2021-06-03T19:10:35.7558912Z 2021-06-03T19:10:36.0814288Z * installing *binary* package ‘rlang’ ... 2021-06-03T19:10:36.0900197Z * DONE (rlang) 2021-06-03T19:10:36.3359832Z * installing *binary* package ‘magrittr’ ... 2021-06-03T19:10:36.3411100Z * DONE (magrittr) 2021-06-03T19:10:36.5869362Z * installing *binary* package ‘glue’ ... 2021-06-03T19:10:36.5912619Z * DONE (glue) 2021-06-03T19:10:36.8225623Z * installing *binary* package ‘sys’ ... 2021-06-03T19:10:36.8266620Z * DONE (sys) 2021-06-03T19:10:37.0475083Z * installing *binary* package ‘mime’ ... 2021-06-03T19:10:37.0517088Z * DONE (mime) 2021-06-03T19:10:37.3862783Z * installing *binary* package ‘curl’ ... 2021-06-03T19:10:37.3937619Z * DONE (curl) 2021-06-03T19:10:37.6831782Z * installing *binary* package ‘jsonlite’ ... 2021-06-03T19:10:37.6885958Z * DONE (jsonlite) 2021-06-03T19:10:37.9152911Z * installing *binary* package ‘ini’ ... 2021-06-03T19:10:37.9192380Z * DONE (ini) 2021-06-03T19:10:38.1810058Z * installing *binary* package ‘gitcreds’ ... 2021-06-03T19:10:38.1860922Z * DONE (gitcreds) 2021-06-03T19:10:38.4811115Z * installing *binary* package ‘zip’ ... 2021-06-03T19:10:38.4873979Z * DONE (zip) 2021-06-03T19:10:38.7478291Z * installing *binary* package ‘rstudioapi’ ... 2021-06-03T19:10:38.7535409Z * DONE (rstudioapi) 2021-06-03T19:10:39.0059780Z * installing *binary* package ‘fastmap’ ... 2021-06-03T19:10:39.0108950Z * DONE (fastmap) 2021-06-03T19:10:39.2724003Z * installing *binary* package ‘yaml’ ... 2021-06-03T19:10:39.2784132Z * DONE (yaml) 2021-06-03T19:10:39.5121532Z * installing *binary* package ‘withr’ ... 2021-06-03T19:10:39.5167676Z * DONE (withr) 2021-06-03T19:10:39.7567716Z * installing *binary* package ‘whisker’ ... 2021-06-03T19:10:39.7616054Z * DONE (whisker) 2021-06-03T19:10:39.9896555Z * installing *binary* package ‘rappdirs’ ... 2021-06-03T19:10:39.9944930Z * DONE (rappdirs) 2021-06-03T19:10:40.2982533Z * installing *binary* package ‘fs’ ... 2021-06-03T19:10:40.3060883Z * DONE (fs) 2021-06-03T19:10:40.5286855Z * installing *binary* package ‘clipr’ ... 2021-06-03T19:10:40.5332004Z * DONE (clipr) 2021-06-03T19:10:40.7979381Z * installing *binary* package ‘git2r’ ... 2021-06-03T19:10:40.8034121Z * DONE (git2r) 2021-06-03T19:10:41.0272317Z * installing *binary* package ‘askpass’ ... 2021-06-03T19:10:41.0315458Z * DONE (askpass) 2021-06-03T19:10:41.2894113Z * installing *binary* package ‘cli’ ... 2021-06-03T19:10:41.2945821Z * DONE (cli) 2021-06-03T19:10:41.5749042Z * installing *binary* package ‘purrr’ ... 2021-06-03T19:10:41.5802196Z * DONE (purrr) 2021-06-03T19:10:41.8427549Z * installing *binary* package ‘lifecycle’ ... 2021-06-03T19:10:41.8492335Z * DONE (lifecycle) 2021-06-03T19:10:42.0651406Z * installing *binary* package ‘cachem’ ... 2021-06-03T19:10:42.0707665Z * DONE (cachem) 2021-06-03T19:10:42.4563596Z * installing *binary* package ‘openssl’ ... 2021-06-03T19:10:42.4646758Z * DONE (openssl) 2021-06-03T19:10:42.7073951Z * installing *binary* package ‘memoise’ ... 2021-06-03T19:10:42.7118072Z * DONE (memoise) 2021-06-03T19:10:42.9821788Z * installing *binary* package ‘httr’ ... 2021-06-03T19:10:42.9878728Z * DONE (httr) 2021-06-03T19:10:43.2247265Z * installing *binary* package ‘credentials’ ... 2021-06-03T19:10:43.2292586Z * DONE (credentials) 2021-06-03T19:10:43.4685818Z * installing *binary* package ‘gh’ ... 2021-06-03T19:10:43.4769710Z * DONE (gh) 2021-06-03T19:10:43.7242403Z * installing *binary* package ‘gert’ ... 2021-06-03T19:10:43.7291005Z * DONE (gert) 2021-06-03T19:10:44.0234482Z * installing *binary* package ‘usethis’ ... 2021-06-03T19:10:44.0306630Z * DONE (usethis) 2021-06-03T19:10:44.0375868Z 2021-06-03T19:10:44.0376882Z The downloaded source packages are in 2021-06-03T19:10:44.0378227Z ‘/tmp/RtmpyiUdxl/downloaded_packages’ 2021-06-03T19:10:44.0390064Z Running `R CMD build`... 2021-06-03T19:10:45.7970636Z * checking for file ‘/tmp/RtmpyiUdxl/remotes6cf52f2e0b7f/ropensci-tic-3b4dfb8/DESCRIPTION’ ... OK 2021-06-03T19:10:45.7972126Z * preparing ‘tic’: 2021-06-03T19:10:45.7973377Z * checking DESCRIPTION meta-information ... OK 2021-06-03T19:10:45.7974291Z * installing the package to process help pages 2021-06-03T19:10:45.7975704Z * checking for LF line-endings in source and make files and shell scripts 2021-06-03T19:10:45.7976607Z * checking for empty or unneeded directories 2021-06-03T19:10:45.7977569Z Removed empty directory ‘tic/.circleci’ 2021-06-03T19:10:45.7978521Z Removed empty directory ‘tic/pkgdown’ 2021-06-03T19:10:45.7979912Z * building ‘tic_0.10.0.tar.gz’ 2021-06-03T19:10:45.7982438Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-06-03T19:10:45.7983980Z (as ‘lib’ is unspecified) 2021-06-03T19:10:46.1910960Z * installing *source* package ‘tic’ ... 2021-06-03T19:10:46.2223868Z ** R 2021-06-03T19:10:46.2567249Z ** inst 2021-06-03T19:10:46.2609502Z ** preparing package for lazy loading 2021-06-03T19:10:46.4782187Z ** help 2021-06-03T19:10:46.6470670Z *** installing help indices 2021-06-03T19:10:46.7898799Z *** copying figures 2021-06-03T19:10:46.7906370Z ** building package indices 2021-06-03T19:10:46.9369774Z ** installing vignettes 2021-06-03T19:10:46.9407325Z ** testing if installed package can be loaded 2021-06-03T19:10:47.2108882Z * DONE (tic) 2021-06-03T19:10:47.2265526Z Using github PAT from envvar GITHUB_PAT 2021-06-03T19:10:47.5564066Z Downloading GitHub repo muschellij2/ghtravis@HEAD 2021-06-03T19:10:50.1088436Z desc (1.3.0 -> 7be86f2f7...) [GitHub] 2021-06-03T19:10:50.1089881Z utf8 (NA -> 1.2.1 ) [CRAN] 2021-06-03T19:10:50.1091354Z vctrs (NA -> 0.3.8 ) [CRAN] 2021-06-03T19:10:50.1092428Z pkgconfig (NA -> 2.0.3 ) [CRAN] 2021-06-03T19:10:50.1093738Z pillar (NA -> 1.6.1 ) [CRAN] 2021-06-03T19:10:50.1096766Z Installing 37 packages: utf8, vctrs, pkgconfig, pillar, tibble, rematch2, fansi, diffobj, waldo, ps, processx, praise, pkgload, evaluate, ellipsis, digest, callr, brio, xml2, xfun, markdown, highr, stringr, stringi, Rcpp, knitr, commonmark, brew, xopen, sessioninfo, prettyunits, pkgbuild, testthat, rversions, roxygen2, rcmdcheck, devtools 2021-06-03T19:10:50.1099944Z tibble (NA -> 3.1.2 ) [CRAN] 2021-06-03T19:10:50.1101371Z rematch2 (NA -> 2.1.2 ) [CRAN] 2021-06-03T19:10:50.1102456Z fansi (NA -> 0.5.0 ) [CRAN] 2021-06-03T19:10:50.1103689Z diffobj (NA -> 0.3.4 ) [CRAN] 2021-06-03T19:10:50.1104766Z waldo (NA -> 0.2.5 ) [CRAN] 2021-06-03T19:10:50.1105841Z ps (NA -> 1.6.0 ) [CRAN] 2021-06-03T19:10:50.1106969Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-06-03T19:10:50.1108627Z (as ‘lib’ is unspecified) 2021-06-03T19:10:50.1109427Z processx (NA -> 3.5.2 ) [CRAN] 2021-06-03T19:10:50.1110509Z praise (NA -> 1.0.0 ) [CRAN] 2021-06-03T19:10:50.1111663Z pkgload (NA -> 1.2.1 ) [CRAN] 2021-06-03T19:10:50.1112831Z evaluate (NA -> 0.14 ) [CRAN] 2021-06-03T19:10:50.1113772Z ellipsis (NA -> 0.3.2 ) [CRAN] 2021-06-03T19:10:50.1114821Z digest (NA -> 0.6.27 ) [CRAN] 2021-06-03T19:10:50.1115745Z callr (NA -> 3.7.0 ) [CRAN] 2021-06-03T19:10:50.1116826Z brio (NA -> 1.1.2 ) [CRAN] 2021-06-03T19:10:50.1117761Z xml2 (NA -> 1.3.2 ) [CRAN] 2021-06-03T19:10:50.1118836Z xfun (NA -> 0.23 ) [CRAN] 2021-06-03T19:10:50.1119746Z markdown (NA -> 1.1 ) [CRAN] 2021-06-03T19:10:50.1120863Z highr (NA -> 0.9 ) [CRAN] 2021-06-03T19:10:50.1121815Z stringr (NA -> 1.4.0 ) [CRAN] 2021-06-03T19:10:50.1122760Z stringi (NA -> 1.6.2 ) [CRAN] 2021-06-03T19:10:50.1123711Z Rcpp (NA -> 1.0.6 ) [CRAN] 2021-06-03T19:10:50.1124647Z knitr (NA -> 1.33 ) [CRAN] 2021-06-03T19:10:50.1125660Z commonmark (NA -> 1.7 ) [CRAN] 2021-06-03T19:10:50.1127335Z brew (NA -> 1.0-6 ) [CRAN] 2021-06-03T19:10:50.1128339Z xopen (NA -> 1.0.0 ) [CRAN] 2021-06-03T19:10:50.1129539Z sessioninfo (NA -> 1.1.1 ) [CRAN] 2021-06-03T19:10:50.1130824Z prettyunits (NA -> 1.1.1 ) [CRAN] 2021-06-03T19:10:50.1131847Z pkgbuild (NA -> 1.2.0 ) [CRAN] 2021-06-03T19:10:50.1132833Z testthat (NA -> 3.0.2 ) [CRAN] 2021-06-03T19:10:50.1133829Z rversions (NA -> 2.1.1 ) [CRAN] 2021-06-03T19:10:50.1134822Z roxygen2 (NA -> 7.1.1 ) [CRAN] 2021-06-03T19:10:50.1135792Z rcmdcheck (NA -> 1.3.3 ) [CRAN] 2021-06-03T19:10:50.1136775Z devtools (NA -> 2.4.1 ) [CRAN] 2021-06-03T19:11:07.4613695Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/utf8_1.2.1.tar.gz' 2021-06-03T19:11:08.9164200Z Content type 'binary/octet-stream' length 237292 bytes (231 KB) 2021-06-03T19:11:09.1036968Z ================================================== 2021-06-03T19:11:09.1037568Z downloaded 231 KB 2021-06-03T19:11:09.1037868Z 2021-06-03T19:11:09.1077334Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/vctrs_0.3.8.tar.gz' 2021-06-03T19:11:10.5876885Z Content type 'binary/octet-stream' length 1609764 bytes (1.5 MB) 2021-06-03T19:11:10.9369372Z ================================================== 2021-06-03T19:11:10.9369897Z downloaded 1.5 MB 2021-06-03T19:11:10.9370213Z 2021-06-03T19:11:10.9405327Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgconfig_2.0.3.tar.gz' 2021-06-03T19:11:12.2486098Z Content type 'binary/octet-stream' length 17479 bytes (17 KB) 2021-06-03T19:11:12.2487307Z ================================================== 2021-06-03T19:11:12.2488502Z downloaded 17 KB 2021-06-03T19:11:12.2489038Z 2021-06-03T19:11:12.2523044Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pillar_1.6.1.tar.gz' 2021-06-03T19:11:13.5636319Z Content type 'binary/octet-stream' length 1008456 bytes (984 KB) 2021-06-03T19:11:13.8993903Z ================================================== 2021-06-03T19:11:13.8995281Z downloaded 984 KB 2021-06-03T19:11:13.8995892Z 2021-06-03T19:11:13.9030203Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tibble_3.1.2.tar.gz' 2021-06-03T19:11:15.3087938Z Content type 'binary/octet-stream' length 810235 bytes (791 KB) 2021-06-03T19:11:15.5724110Z ================================================== 2021-06-03T19:11:15.5725187Z downloaded 791 KB 2021-06-03T19:11:15.5725744Z 2021-06-03T19:11:15.5758787Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rematch2_2.1.2.tar.gz' 2021-06-03T19:11:17.0592367Z Content type 'binary/octet-stream' length 44291 bytes (43 KB) 2021-06-03T19:11:17.1092545Z ================================================== 2021-06-03T19:11:17.1093527Z downloaded 43 KB 2021-06-03T19:11:17.1094198Z 2021-06-03T19:11:17.1132476Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fansi_0.5.0.tar.gz' 2021-06-03T19:11:18.5583242Z Content type 'binary/octet-stream' length 281127 bytes (274 KB) 2021-06-03T19:11:18.8177937Z ================================================== 2021-06-03T19:11:18.8178963Z downloaded 274 KB 2021-06-03T19:11:18.8179577Z 2021-06-03T19:11:18.8222832Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/diffobj_0.3.4.tar.gz' 2021-06-03T19:11:20.2696165Z Content type 'binary/octet-stream' length 991857 bytes (968 KB) 2021-06-03T19:11:20.7274121Z ================================================== 2021-06-03T19:11:20.7275280Z downloaded 968 KB 2021-06-03T19:11:20.7275844Z 2021-06-03T19:11:20.7307395Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/waldo_0.2.5.tar.gz' 2021-06-03T19:11:22.2235085Z Content type 'binary/octet-stream' length 69078 bytes (67 KB) 2021-06-03T19:11:22.3146678Z ================================================== 2021-06-03T19:11:22.3147390Z downloaded 67 KB 2021-06-03T19:11:22.3147672Z 2021-06-03T19:11:22.3188850Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ps_1.6.0.tar.gz' 2021-06-03T19:11:23.7761860Z Content type 'binary/octet-stream' length 358371 bytes (349 KB) 2021-06-03T19:11:24.0198484Z ================================================== 2021-06-03T19:11:24.0199832Z downloaded 349 KB 2021-06-03T19:11:24.0200355Z 2021-06-03T19:11:24.0243373Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/processx_3.5.2.tar.gz' 2021-06-03T19:11:25.4376364Z Content type 'binary/octet-stream' length 421402 bytes (411 KB) 2021-06-03T19:11:25.6992888Z ================================================== 2021-06-03T19:11:25.6993907Z downloaded 411 KB 2021-06-03T19:11:25.6994603Z 2021-06-03T19:11:25.7038452Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/praise_1.0.0.tar.gz' 2021-06-03T19:11:27.0227042Z Content type 'binary/octet-stream' length 15806 bytes (15 KB) 2021-06-03T19:11:27.0868678Z ================================================== 2021-06-03T19:11:27.0869667Z downloaded 15 KB 2021-06-03T19:11:27.0869982Z 2021-06-03T19:11:27.0910313Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgload_1.2.1.tar.gz' 2021-06-03T19:11:28.5365162Z Content type 'binary/octet-stream' length 149679 bytes (146 KB) 2021-06-03T19:11:28.7501350Z ================================================== 2021-06-03T19:11:28.7501984Z downloaded 146 KB 2021-06-03T19:11:28.7502304Z 2021-06-03T19:11:28.7543841Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/evaluate_0.14.tar.gz' 2021-06-03T19:11:31.0700447Z Content type 'binary/octet-stream' length 73484 bytes (71 KB) 2021-06-03T19:11:31.1356488Z ================================================== 2021-06-03T19:11:31.1357397Z downloaded 71 KB 2021-06-03T19:11:31.1357965Z 2021-06-03T19:11:31.1396914Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ellipsis_0.3.2.tar.gz' 2021-06-03T19:11:32.4815391Z Content type 'binary/octet-stream' length 40044 bytes (39 KB) 2021-06-03T19:11:32.5961269Z ================================================== 2021-06-03T19:11:32.5962132Z downloaded 39 KB 2021-06-03T19:11:32.5962413Z 2021-06-03T19:11:32.6005084Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/digest_0.6.27.tar.gz' 2021-06-03T19:11:33.9374214Z Content type 'binary/octet-stream' length 356534 bytes (348 KB) 2021-06-03T19:11:33.9666665Z ================================================== 2021-06-03T19:11:33.9667665Z downloaded 348 KB 2021-06-03T19:11:33.9670311Z 2021-06-03T19:11:33.9705762Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/callr_3.7.0.tar.gz' 2021-06-03T19:11:35.6363486Z Content type 'binary/octet-stream' length 433269 bytes (423 KB) 2021-06-03T19:11:35.9196157Z ================================================== 2021-06-03T19:11:35.9197191Z downloaded 423 KB 2021-06-03T19:11:35.9197656Z 2021-06-03T19:11:35.9232731Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brio_1.1.2.tar.gz' 2021-06-03T19:11:37.7916400Z Content type 'binary/octet-stream' length 42047 bytes (41 KB) 2021-06-03T19:11:37.8103290Z ================================================== 2021-06-03T19:11:37.8104142Z downloaded 41 KB 2021-06-03T19:11:37.8104440Z 2021-06-03T19:11:37.8211369Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xml2_1.3.2.tar.gz' 2021-06-03T19:11:39.5700897Z Content type 'binary/octet-stream' length 617634 bytes (603 KB) 2021-06-03T19:11:39.8514910Z ================================================== 2021-06-03T19:11:39.8516572Z downloaded 603 KB 2021-06-03T19:11:39.8517296Z 2021-06-03T19:11:39.8551344Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xfun_0.23.tar.gz' 2021-06-03T19:11:41.2044946Z Content type 'binary/octet-stream' length 328669 bytes (320 KB) 2021-06-03T19:11:41.4900305Z ================================================== 2021-06-03T19:11:41.4902996Z downloaded 320 KB 2021-06-03T19:11:41.4904352Z 2021-06-03T19:11:41.4941209Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/markdown_1.1.tar.gz' 2021-06-03T19:11:43.3426094Z Content type 'binary/octet-stream' length 230102 bytes (224 KB) 2021-06-03T19:11:43.5366049Z ================================================== 2021-06-03T19:11:43.5366791Z downloaded 224 KB 2021-06-03T19:11:43.5367232Z 2021-06-03T19:11:43.5416365Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/highr_0.9.tar.gz' 2021-06-03T19:11:44.9185369Z Content type 'binary/octet-stream' length 38652 bytes (37 KB) 2021-06-03T19:11:45.0258136Z ================================================== 2021-06-03T19:11:45.0259149Z downloaded 37 KB 2021-06-03T19:11:45.0259963Z 2021-06-03T19:11:45.0299961Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringr_1.4.0.tar.gz' 2021-06-03T19:11:46.3357716Z Content type 'binary/octet-stream' length 205226 bytes (200 KB) 2021-06-03T19:11:46.5101927Z ================================================== 2021-06-03T19:11:46.5103071Z downloaded 200 KB 2021-06-03T19:11:46.5103811Z 2021-06-03T19:11:46.5141288Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringi_1.6.2.tar.gz' 2021-06-03T19:11:49.1888265Z Content type 'binary/octet-stream' length 2947889 bytes (2.8 MB) 2021-06-03T19:11:49.6617880Z ================================================== 2021-06-03T19:11:49.6619091Z downloaded 2.8 MB 2021-06-03T19:11:49.6619815Z 2021-06-03T19:11:49.6698078Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/Rcpp_1.0.6.tar.gz' 2021-06-03T19:11:51.5199216Z Content type 'binary/octet-stream' length 4188815 bytes (4.0 MB) 2021-06-03T19:11:52.0056985Z ================================================== 2021-06-03T19:11:52.0057579Z downloaded 4.0 MB 2021-06-03T19:11:52.0057898Z 2021-06-03T19:11:52.0096782Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/knitr_1.33.tar.gz' 2021-06-03T19:11:53.2282738Z Content type 'binary/octet-stream' length 1407731 bytes (1.3 MB) 2021-06-03T19:11:53.7096627Z ================================================== 2021-06-03T19:11:53.7098053Z downloaded 1.3 MB 2021-06-03T19:11:53.7098804Z 2021-06-03T19:11:53.7140482Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/commonmark_1.7.tar.gz' 2021-06-03T19:11:54.9697666Z Content type 'binary/octet-stream' length 491126 bytes (479 KB) 2021-06-03T19:11:55.2336185Z ================================================== 2021-06-03T19:11:55.2337024Z downloaded 479 KB 2021-06-03T19:11:55.2337452Z 2021-06-03T19:11:55.2377010Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brew_1.0-6.tar.gz' 2021-06-03T19:11:58.8725908Z Content type 'binary/octet-stream' length 109619 bytes (107 KB) 2021-06-03T19:11:58.9740100Z ================================================== 2021-06-03T19:11:58.9741242Z downloaded 107 KB 2021-06-03T19:11:58.9742294Z 2021-06-03T19:11:58.9782955Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xopen_1.0.0.tar.gz' 2021-06-03T19:12:00.6254350Z Content type 'binary/octet-stream' length 22203 bytes (21 KB) 2021-06-03T19:12:00.6772056Z ================================================== 2021-06-03T19:12:00.6774084Z downloaded 21 KB 2021-06-03T19:12:00.6774786Z 2021-06-03T19:12:00.6814734Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sessioninfo_1.1.1.tar.gz' 2021-06-03T19:12:02.1360345Z Content type 'binary/octet-stream' length 43717 bytes (42 KB) 2021-06-03T19:12:02.1807060Z ================================================== 2021-06-03T19:12:02.1808360Z downloaded 42 KB 2021-06-03T19:12:02.1808996Z 2021-06-03T19:12:02.1842781Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/prettyunits_1.1.1.tar.gz' 2021-06-03T19:12:03.6359821Z Content type 'binary/octet-stream' length 34301 bytes (33 KB) 2021-06-03T19:12:03.6790477Z ================================================== 2021-06-03T19:12:03.6790983Z downloaded 33 KB 2021-06-03T19:12:03.6792527Z 2021-06-03T19:12:03.6830701Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgbuild_1.2.0.tar.gz' 2021-06-03T19:12:05.1293195Z Content type 'binary/octet-stream' length 138624 bytes (135 KB) 2021-06-03T19:12:05.2654397Z ================================================== 2021-06-03T19:12:05.2656192Z downloaded 135 KB 2021-06-03T19:12:05.2657626Z 2021-06-03T19:12:05.2697520Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/testthat_3.0.2.tar.gz' 2021-06-03T19:12:06.6039745Z Content type 'binary/octet-stream' length 3539956 bytes (3.4 MB) 2021-06-03T19:12:07.0781628Z ================================================== 2021-06-03T19:12:07.0782187Z downloaded 3.4 MB 2021-06-03T19:12:07.0782822Z 2021-06-03T19:12:07.0824975Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rversions_2.1.1.tar.gz' 2021-06-03T19:12:08.4215297Z Content type 'binary/octet-stream' length 63927 bytes (62 KB) 2021-06-03T19:12:08.5044254Z ================================================== 2021-06-03T19:12:08.5044903Z downloaded 62 KB 2021-06-03T19:12:08.5045390Z 2021-06-03T19:12:08.5087559Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/roxygen2_7.1.1.tar.gz' 2021-06-03T19:12:09.9760974Z Content type 'binary/octet-stream' length 1369091 bytes (1.3 MB) 2021-06-03T19:12:10.3838779Z ================================================== 2021-06-03T19:12:10.3839394Z downloaded 1.3 MB 2021-06-03T19:12:10.3839709Z 2021-06-03T19:12:10.3879548Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rcmdcheck_1.3.3.tar.gz' 2021-06-03T19:12:11.5162715Z Content type 'binary/octet-stream' length 131477 bytes (128 KB) 2021-06-03T19:12:11.6917057Z ================================================== 2021-06-03T19:12:11.6917891Z downloaded 128 KB 2021-06-03T19:12:11.6918336Z 2021-06-03T19:12:11.6959391Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/devtools_2.4.1.tar.gz' 2021-06-03T19:12:13.0280258Z Content type 'binary/octet-stream' length 392940 bytes (383 KB) 2021-06-03T19:12:13.2917214Z ================================================== 2021-06-03T19:12:13.2918298Z downloaded 383 KB 2021-06-03T19:12:13.2918852Z 2021-06-03T19:12:13.5460674Z * installing *binary* package ‘utf8’ ... 2021-06-03T19:12:13.5510029Z * DONE (utf8) 2021-06-03T19:12:13.7657184Z * installing *binary* package ‘pkgconfig’ ... 2021-06-03T19:12:13.7699509Z * DONE (pkgconfig) 2021-06-03T19:12:14.0198470Z * installing *binary* package ‘fansi’ ... 2021-06-03T19:12:14.0246976Z * DONE (fansi) 2021-06-03T19:12:14.3046260Z * installing *binary* package ‘diffobj’ ... 2021-06-03T19:12:14.3102021Z * DONE (diffobj) 2021-06-03T19:12:14.5622675Z * installing *binary* package ‘ps’ ... 2021-06-03T19:12:14.5675683Z * DONE (ps) 2021-06-03T19:12:14.7909750Z * installing *binary* package ‘praise’ ... 2021-06-03T19:12:14.7956198Z * DONE (praise) 2021-06-03T19:12:15.0250150Z * installing *binary* package ‘pkgload’ ... 2021-06-03T19:12:15.0294582Z * DONE (pkgload) 2021-06-03T19:12:15.2583342Z * installing *binary* package ‘evaluate’ ... 2021-06-03T19:12:15.2633260Z * DONE (evaluate) 2021-06-03T19:12:15.5070762Z * installing *binary* package ‘ellipsis’ ... 2021-06-03T19:12:15.5110369Z * DONE (ellipsis) 2021-06-03T19:12:15.7945250Z * installing *binary* package ‘digest’ ... 2021-06-03T19:12:15.8004916Z * DONE (digest) 2021-06-03T19:12:16.0179434Z * installing *binary* package ‘brio’ ... 2021-06-03T19:12:16.0223145Z * DONE (brio) 2021-06-03T19:12:16.3222637Z * installing *binary* package ‘xml2’ ... 2021-06-03T19:12:16.3288510Z * DONE (xml2) 2021-06-03T19:12:16.5761529Z * installing *binary* package ‘xfun’ ... 2021-06-03T19:12:16.5812825Z * DONE (xfun) 2021-06-03T19:12:17.0952426Z * installing *binary* package ‘stringi’ ... 2021-06-03T19:12:17.1061306Z * DONE (stringi) 2021-06-03T19:12:18.2880653Z * installing *binary* package ‘Rcpp’ ... 2021-06-03T19:12:18.3345629Z * DONE (Rcpp) 2021-06-03T19:12:18.6331179Z * installing *binary* package ‘commonmark’ ... 2021-06-03T19:12:18.6387857Z * DONE (commonmark) 2021-06-03T19:12:18.9038722Z * installing *binary* package ‘brew’ ... 2021-06-03T19:12:18.9100110Z * DONE (brew) 2021-06-03T19:12:19.1432498Z * installing *binary* package ‘sessioninfo’ ... 2021-06-03T19:12:19.1476169Z * DONE (sessioninfo) 2021-06-03T19:12:19.3738018Z * installing *binary* package ‘prettyunits’ ... 2021-06-03T19:12:19.3776395Z * DONE (prettyunits) 2021-06-03T19:12:19.7762323Z * installing *binary* package ‘vctrs’ ... 2021-06-03T19:12:19.7851189Z * DONE (vctrs) 2021-06-03T19:12:20.0460611Z * installing *binary* package ‘processx’ ... 2021-06-03T19:12:20.0509894Z * DONE (processx) 2021-06-03T19:12:20.3132573Z * installing *binary* package ‘markdown’ ... 2021-06-03T19:12:20.3193737Z * DONE (markdown) 2021-06-03T19:12:20.5603265Z * installing *binary* package ‘highr’ ... 2021-06-03T19:12:20.5651170Z * DONE (highr) 2021-06-03T19:12:20.8147497Z * installing *binary* package ‘stringr’ ... 2021-06-03T19:12:20.8198330Z * DONE (stringr) 2021-06-03T19:12:21.0427079Z * installing *binary* package ‘rversions’ ... 2021-06-03T19:12:21.0470255Z * DONE (rversions) 2021-06-03T19:12:21.3725754Z * installing *binary* package ‘pillar’ ... 2021-06-03T19:12:21.3794252Z * DONE (pillar) 2021-06-03T19:12:21.6382854Z * installing *binary* package ‘callr’ ... 2021-06-03T19:12:21.6430069Z * DONE (callr) 2021-06-03T19:12:22.0780110Z * installing *binary* package ‘knitr’ ... 2021-06-03T19:12:22.0921921Z * DONE (knitr) 2021-06-03T19:12:22.3296000Z * installing *binary* package ‘xopen’ ... 2021-06-03T19:12:22.3337809Z * DONE (xopen) 2021-06-03T19:12:22.6539159Z * installing *binary* package ‘tibble’ ... 2021-06-03T19:12:22.6606056Z * DONE (tibble) 2021-06-03T19:12:22.8887548Z * installing *binary* package ‘pkgbuild’ ... 2021-06-03T19:12:22.8934651Z * DONE (pkgbuild) 2021-06-03T19:12:23.2734140Z * installing *binary* package ‘roxygen2’ ... 2021-06-03T19:12:23.2823135Z * DONE (roxygen2) 2021-06-03T19:12:23.5004758Z * installing *binary* package ‘rematch2’ ... 2021-06-03T19:12:23.5045779Z * DONE (rematch2) 2021-06-03T19:12:23.7387139Z * installing *binary* package ‘rcmdcheck’ ... 2021-06-03T19:12:23.7427426Z * DONE (rcmdcheck) 2021-06-03T19:12:23.9752842Z * installing *binary* package ‘waldo’ ... 2021-06-03T19:12:23.9795872Z * DONE (waldo) 2021-06-03T19:12:24.6106381Z * installing *binary* package ‘testthat’ ... 2021-06-03T19:12:24.6267552Z * DONE (testthat) 2021-06-03T19:12:24.8801967Z * installing *binary* package ‘devtools’ ... 2021-06-03T19:12:24.8855265Z * DONE (devtools) 2021-06-03T19:12:24.8915952Z 2021-06-03T19:12:24.8916984Z The downloaded source packages are in 2021-06-03T19:12:24.8918385Z ‘/tmp/RtmpyiUdxl/downloaded_packages’ 2021-06-03T19:12:25.6982281Z Downloading GitHub repo muschellij2/desc@HEAD 2021-06-03T19:12:27.2938456Z 2021-06-03T19:12:27.6285450Z 2021-06-03T19:12:27.6339062Z checking for file ‘/tmp/RtmpyiUdxl/remotes6cf5461fa681/muschellij2-desc-7be86f2/DESCRIPTION’ ... 2021-06-03T19:12:27.6433324Z 2021-06-03T19:12:27.6435420Z ✔ checking for file ‘/tmp/RtmpyiUdxl/remotes6cf5461fa681/muschellij2-desc-7be86f2/DESCRIPTION’ 2021-06-03T19:12:27.6450877Z 2021-06-03T19:12:27.6498467Z 2021-06-03T19:12:27.6499599Z ─ preparing ‘desc’: 2021-06-03T19:12:27.6568642Z checking DESCRIPTION meta-information ... 2021-06-03T19:12:27.6609954Z 2021-06-03T19:12:27.6611807Z ✔ checking DESCRIPTION meta-information 2021-06-03T19:12:27.7375557Z 2021-06-03T19:12:27.7414111Z 2021-06-03T19:12:27.7416726Z ─ checking for LF line-endings in source and make files and shell scripts 2021-06-03T19:12:27.7429926Z 2021-06-03T19:12:27.7467580Z 2021-06-03T19:12:27.7468881Z ─ checking for empty or unneeded directories 2021-06-03T19:12:27.7478329Z 2021-06-03T19:12:27.7513262Z 2021-06-03T19:12:27.7514350Z ─ building ‘desc_1.2.0.9000.tar.gz’ 2021-06-03T19:12:27.8923401Z 2021-06-03T19:12:27.8925976Z 2021-06-03T19:12:27.8926446Z 2021-06-03T19:12:27.9039075Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-06-03T19:12:27.9040506Z (as ‘lib’ is unspecified) 2021-06-03T19:12:28.2116287Z * installing *source* package ‘desc’ ... 2021-06-03T19:12:28.2346681Z ** R 2021-06-03T19:12:28.2524943Z ** inst 2021-06-03T19:12:28.2544611Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:12:29.7495605Z ** help 2021-06-03T19:12:29.8872713Z *** installing help indices 2021-06-03T19:12:29.9962659Z ** building package indices 2021-06-03T19:12:30.1498899Z ** testing if installed package can be loaded 2021-06-03T19:12:30.3544199Z * DONE (desc) 2021-06-03T19:12:30.5646601Z 2021-06-03T19:12:30.5647945Z 2021-06-03T19:12:30.5650129Z checking for file ‘/tmp/RtmpyiUdxl/remotes6cf52a62d475/muschellij2-ghtravis-0b26809/DESCRIPTION’ ... 2021-06-03T19:12:30.5687486Z 2021-06-03T19:12:30.5689499Z ✔ checking for file ‘/tmp/RtmpyiUdxl/remotes6cf52a62d475/muschellij2-ghtravis-0b26809/DESCRIPTION’ 2021-06-03T19:12:30.5788990Z 2021-06-03T19:12:30.5817030Z 2021-06-03T19:12:30.5818269Z ─ preparing ‘ghtravis’: 2021-06-03T19:12:30.5837378Z 2021-06-03T19:12:30.5838173Z 2021-06-03T19:12:30.5913380Z checking DESCRIPTION meta-information ... 2021-06-03T19:12:30.6130258Z 2021-06-03T19:12:30.6131803Z ✔ checking DESCRIPTION meta-information 2021-06-03T19:12:30.6472650Z 2021-06-03T19:12:30.6529927Z 2021-06-03T19:12:30.6531743Z ─ checking for LF line-endings in source and make files and shell scripts 2021-06-03T19:12:30.6544690Z 2021-06-03T19:12:30.6587543Z 2021-06-03T19:12:30.6589172Z ─ checking for empty or unneeded directories 2021-06-03T19:12:30.6624506Z ─ building ‘ghtravis_0.15.1.tar.gz’ 2021-06-03T19:12:30.6909983Z 2021-06-03T19:12:30.6910958Z 2021-06-03T19:12:30.6912006Z 2021-06-03T19:12:30.7319673Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-06-03T19:12:30.7321215Z (as ‘lib’ is unspecified) 2021-06-03T19:12:30.9846223Z * installing *source* package ‘ghtravis’ ... 2021-06-03T19:12:31.0014803Z ** R 2021-06-03T19:12:31.0126340Z ** inst 2021-06-03T19:12:31.0138759Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:12:32.2008524Z ** help 2021-06-03T19:12:32.2619664Z *** installing help indices 2021-06-03T19:12:32.3183185Z ** building package indices 2021-06-03T19:12:32.3695997Z ** testing if installed package can be loaded 2021-06-03T19:12:33.0954724Z * DONE (ghtravis) 2021-06-03T19:12:33.1067432Z Using github PAT from envvar GITHUB_PAT 2021-06-03T19:12:33.4075330Z Downloading GitHub repo muschellij2/aghast@HEAD 2021-06-03T19:12:35.7750611Z 2021-06-03T19:12:35.7753005Z tidyselect (NA -> 1.1.1) [CRAN] 2021-06-03T19:12:35.7754220Z generics (NA -> 0.1.0) [CRAN] 2021-06-03T19:12:35.7755207Z Installing 5 packages: tidyselect, generics, cpp11, dplyr, tidyr 2021-06-03T19:12:35.7756520Z cpp11 (NA -> 0.2.7) [CRAN] 2021-06-03T19:12:35.7757580Z dplyr (NA -> 1.0.6) [CRAN] 2021-06-03T19:12:35.7758465Z tidyr (NA -> 1.1.3) [CRAN] 2021-06-03T19:12:35.7764875Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-06-03T19:12:35.7766383Z (as ‘lib’ is unspecified) 2021-06-03T19:12:53.4169491Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyselect_1.1.1.tar.gz' 2021-06-03T19:12:54.7498103Z Content type 'binary/octet-stream' length 196666 bytes (192 KB) 2021-06-03T19:12:54.9124165Z ================================================== 2021-06-03T19:12:54.9125288Z downloaded 192 KB 2021-06-03T19:12:54.9125867Z 2021-06-03T19:12:54.9159367Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/generics_0.1.0.tar.gz' 2021-06-03T19:12:56.2347844Z Content type 'binary/octet-stream' length 68547 bytes (66 KB) 2021-06-03T19:12:56.3296719Z ================================================== 2021-06-03T19:12:56.3297300Z downloaded 66 KB 2021-06-03T19:12:56.3298257Z 2021-06-03T19:12:56.3341943Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cpp11_0.2.7.tar.gz' 2021-06-03T19:12:57.9802160Z Content type 'binary/octet-stream' length 195624 bytes (191 KB) 2021-06-03T19:12:58.1071589Z ================================================== 2021-06-03T19:12:58.1072419Z downloaded 191 KB 2021-06-03T19:12:58.1072756Z 2021-06-03T19:12:58.1113134Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/dplyr_1.0.6.tar.gz' 2021-06-03T19:12:59.6210278Z Content type 'binary/octet-stream' length 1245407 bytes (1.2 MB) 2021-06-03T19:13:00.0644896Z ================================================== 2021-06-03T19:13:00.0646865Z downloaded 1.2 MB 2021-06-03T19:13:00.0647605Z 2021-06-03T19:13:00.0691500Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyr_1.1.3.tar.gz' 2021-06-03T19:13:02.1222950Z Content type 'binary/octet-stream' length 1082918 bytes (1.0 MB) 2021-06-03T19:13:02.4814470Z ================================================== 2021-06-03T19:13:02.4815489Z downloaded 1.0 MB 2021-06-03T19:13:02.4816011Z 2021-06-03T19:13:03.2077159Z * installing *binary* package ‘tidyselect’ ... 2021-06-03T19:13:03.2078616Z * DONE (tidyselect) 2021-06-03T19:13:03.2079629Z * installing *binary* package ‘generics’ ... 2021-06-03T19:13:03.2080536Z * DONE (generics) 2021-06-03T19:13:03.2403076Z * installing *binary* package ‘cpp11’ ... 2021-06-03T19:13:03.2462654Z * DONE (cpp11) 2021-06-03T19:13:03.5775821Z * installing *binary* package ‘dplyr’ ... 2021-06-03T19:13:03.5871126Z * DONE (dplyr) 2021-06-03T19:13:03.9375816Z * installing *binary* package ‘tidyr’ ... 2021-06-03T19:13:03.9456034Z * DONE (tidyr) 2021-06-03T19:13:03.9522735Z 2021-06-03T19:13:03.9523900Z The downloaded source packages are in 2021-06-03T19:13:03.9525395Z ‘/tmp/RtmpyiUdxl/downloaded_packages’ 2021-06-03T19:13:04.1616605Z 2021-06-03T19:13:04.1620984Z checking for file ‘/tmp/RtmpyiUdxl/remotes6cf52aa29b29/muschellij2-aghast-0c3b853/DESCRIPTION’ ... 2021-06-03T19:13:04.1674340Z 2021-06-03T19:13:04.1676917Z ✔ checking for file ‘/tmp/RtmpyiUdxl/remotes6cf52aa29b29/muschellij2-aghast-0c3b853/DESCRIPTION’ 2021-06-03T19:13:04.1748604Z 2021-06-03T19:13:04.1792758Z 2021-06-03T19:13:04.1795244Z ─ preparing ‘aghast’: 2021-06-03T19:13:04.1809883Z checking DESCRIPTION meta-information 2021-06-03T19:13:04.1812312Z 2021-06-03T19:13:04.1844374Z checking DESCRIPTION meta-information ... 2021-06-03T19:13:04.1884216Z 2021-06-03T19:13:04.1886276Z ✔ checking DESCRIPTION meta-information 2021-06-03T19:13:04.2188745Z 2021-06-03T19:13:04.2233140Z 2021-06-03T19:13:04.2236288Z ─ checking for LF line-endings in source and make files and shell scripts 2021-06-03T19:13:04.2247660Z 2021-06-03T19:13:04.2290419Z 2021-06-03T19:13:04.2293357Z ─ checking for empty or unneeded directories 2021-06-03T19:13:04.2331401Z ─ building ‘aghast_0.2.1.tar.gz’ 2021-06-03T19:13:04.2428108Z 2021-06-03T19:13:04.2431779Z 2021-06-03T19:13:04.2433300Z 2021-06-03T19:13:04.2512138Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-06-03T19:13:04.2513419Z (as ‘lib’ is unspecified) 2021-06-03T19:13:04.4712613Z * installing *source* package ‘aghast’ ... 2021-06-03T19:13:04.4969409Z ** R 2021-06-03T19:13:04.5042298Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:13:04.7898866Z ** help 2021-06-03T19:13:04.8158744Z *** installing help indices 2021-06-03T19:13:04.8421613Z ** building package indices 2021-06-03T19:13:04.8646972Z ** testing if installed package can be loaded 2021-06-03T19:13:05.0656217Z * DONE (aghast) 2021-06-03T19:13:05.0738494Z Installing 1 packages: covr 2021-06-03T19:13:05.0749031Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-06-03T19:13:05.0750539Z (as ‘lib’ is unspecified) 2021-06-03T19:13:22.8059084Z also installing the dependencies ‘lazyeval’, ‘rex’ 2021-06-03T19:13:22.8059586Z 2021-06-03T19:13:22.8067510Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lazyeval_0.2.2.tar.gz' 2021-06-03T19:13:24.0293809Z Content type 'binary/octet-stream' length 163882 bytes (160 KB) 2021-06-03T19:13:24.0408082Z ================================================== 2021-06-03T19:13:24.0408832Z downloaded 160 KB 2021-06-03T19:13:24.0409296Z 2021-06-03T19:13:24.0450466Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rex_1.2.0.tar.gz' 2021-06-03T19:13:25.9404396Z Content type 'binary/octet-stream' length 121278 bytes (118 KB) 2021-06-03T19:13:25.9499201Z ================================================== 2021-06-03T19:13:25.9500490Z downloaded 118 KB 2021-06-03T19:13:25.9501051Z 2021-06-03T19:13:25.9541323Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/covr_3.5.1.tar.gz' 2021-06-03T19:13:28.6220877Z Content type 'binary/octet-stream' length 287473 bytes (280 KB) 2021-06-03T19:13:28.6371146Z ================================================== 2021-06-03T19:13:28.6372408Z downloaded 280 KB 2021-06-03T19:13:28.6372987Z 2021-06-03T19:13:28.8838055Z * installing *binary* package ‘lazyeval’ ... 2021-06-03T19:13:28.8885609Z * DONE (lazyeval) 2021-06-03T19:13:29.1414736Z * installing *binary* package ‘rex’ ... 2021-06-03T19:13:29.1474999Z * DONE (rex) 2021-06-03T19:13:29.4106974Z * installing *binary* package ‘covr’ ... 2021-06-03T19:13:29.4173520Z * DONE (covr) 2021-06-03T19:13:29.4241727Z 2021-06-03T19:13:29.4242804Z The downloaded source packages are in 2021-06-03T19:13:29.4244320Z ‘/tmp/RtmpyiUdxl/downloaded_packages’ 2021-06-03T19:13:29.4415737Z 2021-06-03T19:13:29.4463991Z ##[group]Run remotes::install_deps(dependencies = TRUE) 2021-06-03T19:13:29.4464887Z remotes::install_deps(dependencies = TRUE) 2021-06-03T19:13:29.4465702Z remotes::install_cran("rcmdcheck") 2021-06-03T19:13:29.4466305Z remotes::install_cran("markdown") 2021-06-03T19:13:29.4476296Z shell: /usr/local/bin/Rscript {0} 2021-06-03T19:13:29.4476767Z env: 2021-06-03T19:13:29.4477279Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:13:29.4477787Z TIC_DEPLOY_KEY: 2021-06-03T19:13:29.4478681Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:13:29.4480499Z GITHUB_PAT: *** 2021-06-03T19:13:29.4481520Z COVERALLS_TOKEN: *** 2021-06-03T19:13:29.4482073Z continue-on-error: false 2021-06-03T19:13:29.4482600Z VDIFFR_RUN_TESTS: 2021-06-03T19:13:29.4483114Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-03T19:13:29.4483606Z TZ: UTC 2021-06-03T19:13:29.4484014Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-03T19:13:29.4484498Z NOT_CRAN: true 2021-06-03T19:13:29.4484925Z ##[endgroup] 2021-06-03T19:13:51.9697811Z base64enc (NA -> 0.1-3 ) [CRAN] 2021-06-03T19:13:51.9699920Z tinytex (NA -> 0.32 ) [CRAN] 2021-06-03T19:13:51.9701465Z htmltools (NA -> 0.5.1.1 ) [CRAN] 2021-06-03T19:13:51.9702674Z rmarkdown (NA -> 2.8 ) [CRAN] 2021-06-03T19:13:51.9703707Z bitops (NA -> 1.0-7 ) [CRAN] 2021-06-03T19:13:51.9704781Z GenomeInf... (NA -> 1.2.0 ) [CRAN] 2021-06-03T19:13:51.9705810Z RCurl (NA -> 1.98-1.3) [CRAN] 2021-06-03T19:13:51.9706796Z IRanges (NA -> 2.16.0 ) [CRAN] 2021-06-03T19:13:51.9707916Z S4Vectors (NA -> 0.20.1 ) [CRAN] 2021-06-03T19:13:51.9709210Z BiocGenerics (NA -> 0.28.0 ) [CRAN] 2021-06-03T19:13:51.9710241Z formatR (NA -> 1.11 ) [CRAN] 2021-06-03T19:13:51.9711291Z futile.op... (NA -> 1.0.1 ) [CRAN] 2021-06-03T19:13:51.9712320Z lambda.r (NA -> 1.2.4 ) [CRAN] 2021-06-03T19:13:51.9713291Z BH (NA -> 1.75.0-0) [CRAN] 2021-06-03T19:13:51.9714282Z snow (NA -> 0.4-3 ) [CRAN] 2021-06-03T19:13:51.9715300Z futile.lo... (NA -> 1.4.3 ) [CRAN] 2021-06-03T19:13:51.9716342Z BiocParallel (NA -> 1.16.6 ) [CRAN] 2021-06-03T19:13:51.9717411Z matrixStats (NA -> 0.59.0 ) [CRAN] 2021-06-03T19:13:51.9719127Z zlibbioc (NA -> 1.28.0 ) [CRAN] 2021-06-03T19:13:51.9719814Z XVector (NA -> 0.22.0 ) [CRAN] 2021-06-03T19:13:51.9720958Z GenomeInfoDb (NA -> 1.18.2 ) [CRAN] 2021-06-03T19:13:51.9721716Z BiocManager (NA -> 1.30.15 ) [CRAN] 2021-06-03T19:13:51.9722408Z bookdown (NA -> 0.22 ) [CRAN] 2021-06-03T19:13:51.9723134Z DelayedArray (NA -> 0.8.0 ) [CRAN] 2021-06-03T19:13:51.9723828Z Biobase (NA -> 2.42.0 ) [CRAN] 2021-06-03T19:13:51.9724532Z GenomicRa... (NA -> 1.34.0 ) [CRAN] 2021-06-03T19:13:51.9725248Z BiocStyle (NA -> 2.10.0 ) [CRAN] 2021-06-03T19:13:51.9725945Z Summarize... (NA -> 1.12.0 ) [CRAN] 2021-06-03T19:13:51.9746679Z Installing 28 packages: base64enc, tinytex, htmltools, rmarkdown, bitops, GenomeInfoDbData, RCurl, IRanges, S4Vectors, BiocGenerics, formatR, futile.options, lambda.r, BH, snow, futile.logger, BiocParallel, matrixStats, zlibbioc, XVector, GenomeInfoDb, BiocManager, bookdown, DelayedArray, Biobase, GenomicRanges, BiocStyle, SummarizedExperiment 2021-06-03T19:13:51.9761188Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-06-03T19:13:51.9762058Z (as ‘lib’ is unspecified) 2021-06-03T19:14:09.3213021Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/base64enc_0.1-3.tar.gz' 2021-06-03T19:14:10.5374625Z Content type 'binary/octet-stream' length 38804 bytes (37 KB) 2021-06-03T19:14:10.6097343Z ================================================== 2021-06-03T19:14:10.6098482Z downloaded 37 KB 2021-06-03T19:14:10.6099350Z 2021-06-03T19:14:10.6140095Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tinytex_0.32.tar.gz' 2021-06-03T19:14:12.9269847Z Content type 'binary/octet-stream' length 119634 bytes (116 KB) 2021-06-03T19:14:13.0042541Z ================================================== 2021-06-03T19:14:13.0044210Z downloaded 116 KB 2021-06-03T19:14:13.0044807Z 2021-06-03T19:14:13.0085458Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/htmltools_0.5.1.1.tar.gz' 2021-06-03T19:14:14.4527118Z Content type 'binary/octet-stream' length 235306 bytes (229 KB) 2021-06-03T19:14:14.6838008Z ================================================== 2021-06-03T19:14:14.6838984Z downloaded 229 KB 2021-06-03T19:14:14.6839461Z 2021-06-03T19:14:14.6878419Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rmarkdown_2.8.tar.gz' 2021-06-03T19:14:16.6385129Z Content type 'binary/octet-stream' length 3648190 bytes (3.5 MB) 2021-06-03T19:14:17.2091729Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/RCurl_1.98-1.3.tar.gz' 2021-06-03T19:14:20.1888609Z Content type 'binary/octet-stream' length 1061287 bytes (1.0 MB) 2021-06-03T19:14:20.6004871Z ================================================== 2021-06-03T19:14:20.6005439Z downloaded 1.0 MB 2021-06-03T19:14:20.6005761Z 2021-06-03T19:14:20.6048187Z trying URL 'https://bioconductor.org/packages/3.8/bioc/src/contrib/IRanges_2.16.0.tar.gz' 2021-06-03T19:14:21.0187744Z Content type 'application/x-gzip' length 457397 bytes (446 KB) 2021-06-03T19:14:21.3812975Z ================================================== 2021-06-03T19:14:21.3813516Z downloaded 446 KB 2021-06-03T19:14:21.3813805Z 2021-06-03T19:14:21.3852239Z trying URL 'https://bioconductor.org/packages/3.8/bioc/src/contrib/S4Vectors_0.20.1.tar.gz' 2021-06-03T19:14:21.7880790Z Content type 'application/x-gzip' length 633420 bytes (618 KB) 2021-06-03T19:14:22.1162557Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/futile.options_1.0.1.tar.gz' 2021-06-03T19:14:25.1536593Z Content type 'binary/octet-stream' length 17783 bytes (17 KB) 2021-06-03T19:14:25.2250430Z ================================================== 2021-06-03T19:14:25.2250908Z downloaded 17 KB 2021-06-03T19:14:25.2251228Z 2021-06-03T19:14:25.2295161Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lambda.r_1.2.4.tar.gz' 2021-06-03T19:14:26.7470198Z Content type 'binary/octet-stream' length 108370 bytes (105 KB) 2021-06-03T19:14:26.9058234Z ================================================== 2021-06-03T19:14:26.9059133Z downloaded 105 KB 2021-06-03T19:14:26.9059418Z 2021-06-03T19:14:26.9099390Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/BH_1.75.0-0.tar.gz' 2021-06-03T19:14:28.3502117Z Content type 'binary/octet-stream' length 11880155 bytes (11.3 MB) 2021-06-03T19:14:29.2504282Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/BiocManager_1.30.15.tar.gz' 2021-06-03T19:14:38.3213144Z Content type 'binary/octet-stream' length 327808 bytes (320 KB) 2021-06-03T19:14:38.6169932Z ================================================== 2021-06-03T19:14:38.6171012Z downloaded 320 KB 2021-06-03T19:14:38.6171523Z 2021-06-03T19:14:38.6220429Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bookdown_0.22.tar.gz' 2021-06-03T19:14:40.4500129Z Content type 'binary/octet-stream' length 1080867 bytes (1.0 MB) 2021-06-03T19:14:40.8097220Z ================================================== 2021-06-03T19:14:40.8097777Z downloaded 1.0 MB 2021-06-03T19:14:40.8098061Z 2021-06-03T19:14:40.8145034Z trying URL 'https://bioconductor.org/packages/3.8/bioc/src/contrib/DelayedArray_0.8.0.tar.gz' 2021-06-03T19:14:41.0708666Z Content type 'application/x-gzip' length 536329 bytes (523 KB) 2021-06-03T19:14:41.1040535Z 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2021-06-03T19:14:42.7877011Z Content type 'application/x-gzip' length 710235 bytes (693 KB) 2021-06-03T19:14:43.1554888Z ================================================== 2021-06-03T19:14:43.1555500Z downloaded 693 KB 2021-06-03T19:14:43.1556024Z 2021-06-03T19:14:43.1586430Z trying URL 'https://bioconductor.org/packages/3.8/bioc/src/contrib/SummarizedExperiment_1.12.0.tar.gz' 2021-06-03T19:14:43.3177703Z Content type 'application/x-gzip' length 1487188 bytes (1.4 MB) 2021-06-03T19:14:43.3608550Z ================================================== 2021-06-03T19:14:43.3609299Z downloaded 1.4 MB 2021-06-03T19:14:43.3609983Z 2021-06-03T19:14:43.5972782Z * installing *binary* package ‘base64enc’ ... 2021-06-03T19:14:43.6014696Z * DONE (base64enc) 2021-06-03T19:14:43.8460808Z * installing *binary* package ‘tinytex’ ... 2021-06-03T19:14:43.8509371Z * DONE (tinytex) 2021-06-03T19:14:44.0822644Z * installing *binary* package ‘bitops’ ... 2021-06-03T19:14:44.0862463Z * DONE (bitops) 2021-06-03T19:14:44.5882796Z * installing *source* package ‘GenomeInfoDbData’ ... 2021-06-03T19:14:44.5977503Z ** data 2021-06-03T19:14:44.6095296Z ** inst 2021-06-03T19:14:44.6103663Z ** help 2021-06-03T19:14:44.6235607Z *** installing help indices 2021-06-03T19:14:44.6415865Z ** building package indices 2021-06-03T19:14:44.6530168Z ** testing if installed package can be loaded 2021-06-03T19:14:44.8389209Z * DONE (GenomeInfoDbData) 2021-06-03T19:14:45.1395130Z * installing *source* package ‘BiocGenerics’ ... 2021-06-03T19:14:45.1567307Z ** R 2021-06-03T19:14:45.1660604Z ** inst 2021-06-03T19:14:45.1676897Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:14:45.3120617Z Creating a new generic function for ‘append’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3160503Z Creating a new generic function for ‘as.data.frame’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3191643Z Creating a new generic function for ‘cbind’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3218872Z Creating a new generic function for ‘rbind’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3245486Z Creating a new generic function for ‘do.call’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3272197Z Creating a new generic function for ‘duplicated’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3296381Z Creating a new generic function for ‘anyDuplicated’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3323520Z Creating a new generic function for ‘eval’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3349891Z Creating a new generic function for ‘pmax’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3376733Z Creating a new generic function for ‘pmin’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3399327Z Creating a new generic function for ‘pmax.int’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3420883Z Creating a new generic function for ‘pmin.int’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3443543Z Creating a new generic function for ‘Reduce’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3464844Z Creating a new generic function for ‘Filter’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3490725Z Creating a new generic function for ‘Find’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3511402Z Creating a new generic function for ‘Map’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3548535Z Creating a new generic function for ‘Position’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3571028Z Creating a new generic function for ‘get’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3591598Z Creating a new generic function for ‘mget’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3613458Z Creating a new generic function for ‘grep’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3633451Z Creating a new generic function for ‘grepl’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3653664Z Creating a new generic function for ‘is.unsorted’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3677331Z Creating a new generic function for ‘lapply’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3697644Z Creating a new generic function for ‘sapply’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3717622Z Creating a new generic function for ‘lengths’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3738551Z Creating a new generic function for ‘mapply’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3760514Z Creating a new generic function for ‘match’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3777980Z Creating a new generic function for ‘rowSums’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3793479Z Creating a new generic function for ‘colSums’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3810034Z Creating a new generic function for ‘rowMeans’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3825819Z Creating a new generic function for ‘colMeans’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3961556Z Creating a new generic function for ‘order’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.3985734Z Creating a new generic function for ‘paste’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4008765Z Creating a new generic function for ‘rank’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4049602Z Creating a new generic function for ‘rownames’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4094385Z Creating a new generic function for ‘colnames’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4132759Z Creating a new generic function for ‘union’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4154238Z Creating a new generic function for ‘intersect’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4176835Z Creating a new generic function for ‘setdiff’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4198854Z Creating a new generic function for ‘sort’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4343895Z Creating a new generic function for ‘table’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4366863Z Creating a new generic function for ‘tapply’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4390478Z Creating a new generic function for ‘unique’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4411670Z Creating a new generic function for ‘unsplit’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4449548Z Creating a new generic function for ‘var’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4470010Z Creating a new generic function for ‘sd’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4490820Z Creating a new generic function for ‘which’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4511855Z Creating a new generic function for ‘which.max’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4530521Z Creating a new generic function for ‘which.min’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4606431Z Creating a new generic function for ‘IQR’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4639441Z Creating a new generic function for ‘mad’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4701700Z Creating a new generic function for ‘xtabs’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4722323Z Creating a new generic function for ‘clusterCall’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4745918Z Creating a new generic function for ‘clusterApply’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4768145Z Creating a new generic function for ‘clusterApplyLB’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4790238Z Creating a new generic function for ‘clusterEvalQ’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4814063Z Creating a new generic function for ‘clusterExport’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4838673Z Creating a new generic function for ‘clusterMap’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4875908Z Creating a new generic function for ‘parLapply’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4901432Z Creating a new generic function for ‘parSapply’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4934761Z Creating a new generic function for ‘parApply’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4963812Z Creating a new generic function for ‘parRapply’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.4990824Z Creating a new generic function for ‘parCapply’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.5027720Z Creating a new generic function for ‘parLapplyLB’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.5051579Z Creating a new generic function for ‘parSapplyLB’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.5416086Z Creating a new generic function for ‘basename’ in package ‘BiocGenerics’ 2021-06-03T19:14:45.5450239Z Creating a new generic function for ‘dirname’ in package ‘BiocGenerics’ 2021-06-03T19:14:47.1838359Z ** help 2021-06-03T19:14:47.5043815Z *** installing help indices 2021-06-03T19:14:47.6766734Z ** building package indices 2021-06-03T19:14:47.8465095Z ** testing if installed package can be loaded 2021-06-03T19:14:48.1963594Z * DONE (BiocGenerics) 2021-06-03T19:14:48.4426077Z * installing *binary* package ‘formatR’ ... 2021-06-03T19:14:48.4477645Z * DONE (formatR) 2021-06-03T19:14:48.6622392Z * installing *binary* package ‘futile.options’ ... 2021-06-03T19:14:48.6659763Z * DONE (futile.options) 2021-06-03T19:15:00.6809042Z * installing *binary* package ‘BH’ ... 2021-06-03T19:15:01.3258733Z * DONE (BH) 2021-06-03T19:15:02.7428377Z * installing *binary* package ‘snow’ ... 2021-06-03T19:15:02.7437965Z * DONE (snow) 2021-06-03T19:15:02.7439292Z * installing *binary* package ‘matrixStats’ ... 2021-06-03T19:15:02.7440270Z * DONE (matrixStats) 2021-06-03T19:15:02.7686218Z * installing *source* package ‘zlibbioc’ ... 2021-06-03T19:15:03.0295161Z configure: creating ./config.status 2021-06-03T19:15:03.1157996Z config.status: creating src/Makevars 2021-06-03T19:15:03.1648498Z ** libs 2021-06-03T19:15:03.2017525Z mkdir -p "/home/runner/work/_temp/Library/zlibbioc/include" 2021-06-03T19:15:03.2073886Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c R_init_zlibbioc.c -o R_init_zlibbioc.o 2021-06-03T19:15:03.2419815Z gcc -shared -L/opt/R/3.5.3/lib/R/lib -L/usr/local/lib -o zlibbioc.so R_init_zlibbioc.o -L/opt/R/3.5.3/lib/R/lib -lR 2021-06-03T19:15:03.4670047Z installing to /home/runner/work/_temp/Library/zlibbioc/libs 2021-06-03T19:15:03.4687320Z ** R 2021-06-03T19:15:03.4713201Z ** inst 2021-06-03T19:15:03.4725422Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:15:03.5221690Z ** help 2021-06-03T19:15:03.5320442Z *** installing help indices 2021-06-03T19:15:03.5478607Z ** building package indices 2021-06-03T19:15:03.5570850Z ** installing vignettes 2021-06-03T19:15:03.5606274Z ** testing if installed package can be loaded 2021-06-03T19:15:03.7410624Z * DONE (zlibbioc) 2021-06-03T19:15:03.9992657Z * installing *binary* package ‘BiocManager’ ... 2021-06-03T19:15:04.0047557Z * DONE (BiocManager) 2021-06-03T19:15:04.2512188Z * installing *binary* package ‘htmltools’ ... 2021-06-03T19:15:04.2557874Z * DONE (htmltools) 2021-06-03T19:15:04.5952531Z * installing *binary* package ‘RCurl’ ... 2021-06-03T19:15:04.6038873Z * DONE (RCurl) 2021-06-03T19:15:04.9421154Z * installing *source* package ‘S4Vectors’ ... 2021-06-03T19:15:04.9575883Z ** libs 2021-06-03T19:15:04.9639417Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c AEbufs.c -o AEbufs.o 2021-06-03T19:15:06.2218608Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c DataFrame_class.c -o DataFrame_class.o 2021-06-03T19:15:06.2707247Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Hits_class.c -o Hits_class.o 2021-06-03T19:15:06.5133163Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c LLint_class.c -o LLint_class.o 2021-06-03T19:15:06.8100220Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c List_class.c -o List_class.o 2021-06-03T19:15:06.8678410Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c R_init_S4Vectors.c -o R_init_S4Vectors.o 2021-06-03T19:15:06.9392394Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rle_class.c -o Rle_class.o 2021-06-03T19:15:07.4056301Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rle_utils.c -o Rle_utils.o 2021-06-03T19:15:07.7583074Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c SEXP_utils.c -o SEXP_utils.o 2021-06-03T19:15:07.7984809Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c SimpleList_class.c -o SimpleList_class.o 2021-06-03T19:15:07.8517771Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c anyMissing.c -o anyMissing.o 2021-06-03T19:15:07.9148409Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c character_utils.c -o character_utils.o 2021-06-03T19:15:08.0306073Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c eval_utils.c -o eval_utils.o 2021-06-03T19:15:08.0920324Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c hash_utils.c -o hash_utils.o 2021-06-03T19:15:08.1487137Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c integer_utils.c -o integer_utils.o 2021-06-03T19:15:08.5830488Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c logical_utils.c -o logical_utils.o 2021-06-03T19:15:08.6459888Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c map_ranges_to_runs.c -o map_ranges_to_runs.o 2021-06-03T19:15:08.9088481Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c safe_arithm.c -o safe_arithm.o 2021-06-03T19:15:09.0054840Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sort_utils.c -o sort_utils.o 2021-06-03T19:15:09.4550963Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c subsetting_utils.c -o subsetting_utils.o 2021-06-03T19:15:09.5811788Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c vector_utils.c -o vector_utils.o 2021-06-03T19:15:09.6636460Z gcc -shared -L/opt/R/3.5.3/lib/R/lib -L/usr/local/lib -o S4Vectors.so AEbufs.o DataFrame_class.o Hits_class.o LLint_class.o List_class.o R_init_S4Vectors.o Rle_class.o Rle_utils.o SEXP_utils.o SimpleList_class.o anyMissing.o character_utils.o eval_utils.o hash_utils.o integer_utils.o logical_utils.o map_ranges_to_runs.o safe_arithm.o sort_utils.o subsetting_utils.o vector_utils.o -L/opt/R/3.5.3/lib/R/lib -lR 2021-06-03T19:15:09.6974839Z installing to /home/runner/work/_temp/Library/S4Vectors/libs 2021-06-03T19:15:09.6997179Z ** R 2021-06-03T19:15:09.7616392Z ** inst 2021-06-03T19:15:09.7654393Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:15:10.4290476Z Creating a generic function for ‘complete.cases’ from package ‘stats’ in package ‘S4Vectors’ 2021-06-03T19:15:10.5734802Z Creating a new generic function for ‘expand.grid’ in package ‘S4Vectors’ 2021-06-03T19:15:10.6342325Z Creating a generic function for ‘%in%’ from package ‘base’ in package ‘S4Vectors’ 2021-06-03T19:15:10.6410273Z Creating a new generic function for ‘findMatches’ in package ‘S4Vectors’ 2021-06-03T19:15:10.6620753Z Creating a generic function for ‘setequal’ from package ‘base’ in package ‘S4Vectors’ 2021-06-03T19:15:10.7861703Z Creating a generic function for ‘as.factor’ from package ‘base’ in package ‘S4Vectors’ 2021-06-03T19:15:10.8463926Z Creating a generic function for ‘tabulate’ from package ‘base’ in package ‘S4Vectors’ 2021-06-03T19:15:11.0922098Z Creating a generic function for ‘cov’ from package ‘stats’ in package ‘S4Vectors’ 2021-06-03T19:15:11.1219933Z Creating a generic function for ‘cor’ from package ‘stats’ in package ‘S4Vectors’ 2021-06-03T19:15:11.1517654Z Creating a generic function for ‘smoothEnds’ from package ‘stats’ in package ‘S4Vectors’ 2021-06-03T19:15:11.1688813Z Creating a generic function for ‘runmed’ from package ‘stats’ in package ‘S4Vectors’ 2021-06-03T19:15:11.1806817Z Creating a generic function for ‘nchar’ from package ‘base’ in package ‘S4Vectors’ 2021-06-03T19:15:11.1864439Z Creating a generic function for ‘substr’ from package ‘base’ in package ‘S4Vectors’ 2021-06-03T19:15:11.1931780Z Creating a generic function for ‘substring’ from package ‘base’ in package ‘S4Vectors’ 2021-06-03T19:15:11.1979087Z Creating a generic function for ‘chartr’ from package ‘base’ in package ‘S4Vectors’ 2021-06-03T19:15:11.2038779Z Creating a generic function for ‘tolower’ from package ‘base’ in package ‘S4Vectors’ 2021-06-03T19:15:11.2087001Z Creating a generic function for ‘toupper’ from package ‘base’ in package ‘S4Vectors’ 2021-06-03T19:15:11.2142933Z Creating a generic function for ‘sub’ from package ‘base’ in package ‘S4Vectors’ 2021-06-03T19:15:11.2249540Z Creating a generic function for ‘gsub’ from package ‘base’ in package ‘S4Vectors’ 2021-06-03T19:15:11.4755753Z in method for ‘coerce’ with signature ‘"data.table","DataFrame"’: no definition for class “data.table” 2021-06-03T19:15:23.6936909Z ** help 2021-06-03T19:15:23.9318046Z *** installing help indices 2021-06-03T19:15:24.0733752Z ** building package indices 2021-06-03T19:15:24.2191336Z ** installing vignettes 2021-06-03T19:15:24.2294975Z ** testing if installed package can be loaded 2021-06-03T19:15:25.1349136Z * DONE (S4Vectors) 2021-06-03T19:15:25.3643322Z * installing *binary* package ‘lambda.r’ ... 2021-06-03T19:15:25.3685899Z * DONE (lambda.r) 2021-06-03T19:15:25.7982456Z * installing *source* package ‘Biobase’ ... 2021-06-03T19:15:25.8127550Z ** libs 2021-06-03T19:15:25.8185013Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rinit.c -o Rinit.o 2021-06-03T19:15:25.8751718Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c anyMissing.c -o anyMissing.o 2021-06-03T19:15:25.9367694Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c envir.c -o envir.o 2021-06-03T19:15:26.0639963Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c matchpt.c -o matchpt.o 2021-06-03T19:15:26.1361637Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMedians.c -o rowMedians.o 2021-06-03T19:15:26.3104357Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sublist_extract.c -o sublist_extract.o 2021-06-03T19:15:26.4114014Z gcc -shared -L/opt/R/3.5.3/lib/R/lib -L/usr/local/lib -o Biobase.so Rinit.o anyMissing.o envir.o matchpt.o rowMedians.o sublist_extract.o -L/opt/R/3.5.3/lib/R/lib -lR 2021-06-03T19:15:26.4389969Z installing to /home/runner/work/_temp/Library/Biobase/libs 2021-06-03T19:15:26.4393030Z ** R 2021-06-03T19:15:26.4604067Z ** data 2021-06-03T19:15:26.4624730Z ** inst 2021-06-03T19:15:26.4705307Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:15:31.9173180Z ** help 2021-06-03T19:15:32.1794570Z *** installing help indices 2021-06-03T19:15:32.3674635Z ** building package indices 2021-06-03T19:15:32.8923463Z ** installing vignettes 2021-06-03T19:15:32.8995387Z ** testing if installed package can be loaded 2021-06-03T19:15:33.4903277Z * DONE (Biobase) 2021-06-03T19:15:34.7516986Z * installing *binary* package ‘rmarkdown’ ... 2021-06-03T19:15:34.7519154Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c CompressedAtomicList_utils.c -o CompressedAtomicList_utils.o 2021-06-03T19:15:34.7521306Z * DONE (rmarkdown) 2021-06-03T19:15:34.7522287Z * installing *source* package ‘IRanges’ ... 2021-06-03T19:15:34.7522956Z ** libs 2021-06-03T19:15:35.0182211Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c CompressedIRangesList_class.c -o CompressedIRangesList_class.o 2021-06-03T19:15:35.1350733Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c CompressedList_class.c -o CompressedList_class.o 2021-06-03T19:15:35.2035430Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c Grouping_class.c -o Grouping_class.o 2021-06-03T19:15:35.3012250Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c IPosRanges_comparison.c -o IPosRanges_comparison.o 2021-06-03T19:15:35.3772776Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c IRanges_class.c -o IRanges_class.o 2021-06-03T19:15:35.5430560Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c IRanges_constructor.c -o IRanges_constructor.o 2021-06-03T19:15:35.6686863Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c NCList.c -o NCList.o 2021-06-03T19:15:36.0262130Z NCList.c: In function ‘NCListAsINTSXP_print’: 2021-06-03T19:15:36.0263866Z NCList.c:674:23: warning: ‘%d’ directive writing between 1 and 11 bytes into a region of size 8 [-Wformat-overflow=] 2021-06-03T19:15:36.0265318Z 674 | sprintf(format, "%c0%d%c", '%', max_digits, 'd'); 2021-06-03T19:15:36.0266010Z | ^~ 2021-06-03T19:15:36.0267546Z NCList.c:674:19: note: directive argument in the range [-2147483647, 2147483647] 2021-06-03T19:15:36.0269738Z 674 | sprintf(format, "%c0%d%c", '%', max_digits, 'd'); 2021-06-03T19:15:36.0270216Z | ^~~~~~~~~ 2021-06-03T19:15:36.0270752Z In file included from /usr/include/stdio.h:867, 2021-06-03T19:15:36.0271436Z from /opt/R/3.5.3/lib/R/include/Rinternals.h:39, 2021-06-03T19:15:36.0272450Z from /opt/R/3.5.3/lib/R/include/Rdefines.h:40, 2021-06-03T19:15:36.0273915Z from /home/runner/work/_temp/Library/S4Vectors/include/S4Vectors_defines.h:18, 2021-06-03T19:15:36.0274793Z from ../inst/include/IRanges_defines.h:18, 2021-06-03T19:15:36.0275385Z from IRanges.h:1, 2021-06-03T19:15:36.0275893Z from NCList.c:5: 2021-06-03T19:15:36.0277359Z /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 5 and 15 bytes into a destination of size 10 2021-06-03T19:15:36.0278537Z 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, 2021-06-03T19:15:36.0279188Z | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-06-03T19:15:36.0279684Z 37 | __bos (__s), __fmt, __va_arg_pack ()); 2021-06-03T19:15:36.0280178Z | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-06-03T19:15:36.1184521Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c R_init_IRanges.c -o R_init_IRanges.o 2021-06-03T19:15:36.1747537Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c Ranges_class.c -o Ranges_class.o 2021-06-03T19:15:36.2391098Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c RleViews_utils.c -o RleViews_utils.o 2021-06-03T19:15:36.7030899Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c S4Vectors_stubs.c -o S4Vectors_stubs.o 2021-06-03T19:15:37.1061879Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c SimpleIRangesList_class.c -o SimpleIRangesList_class.o 2021-06-03T19:15:37.1912325Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c coverage_methods.c -o coverage_methods.o 2021-06-03T19:15:37.4826883Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c extractListFragments.c -o extractListFragments.o 2021-06-03T19:15:37.5523417Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c inter_range_methods.c -o inter_range_methods.o 2021-06-03T19:15:37.7623375Z gcc -shared -L/opt/R/3.5.3/lib/R/lib -L/usr/local/lib -o IRanges.so CompressedAtomicList_utils.o CompressedIRangesList_class.o CompressedList_class.o Grouping_class.o IPosRanges_comparison.o IRanges_class.o IRanges_constructor.o NCList.o R_init_IRanges.o Ranges_class.o RleViews_utils.o S4Vectors_stubs.o SimpleIRangesList_class.o coverage_methods.o extractListFragments.o inter_range_methods.o -L/opt/R/3.5.3/lib/R/lib -lR 2021-06-03T19:15:37.7989778Z installing to /home/runner/work/_temp/Library/IRanges/libs 2021-06-03T19:15:37.7994726Z ** R 2021-06-03T19:15:37.8726104Z ** inst 2021-06-03T19:15:37.8774450Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:15:39.1429548Z Creating a generic function for ‘drop’ from package ‘base’ in package ‘IRanges’ 2021-06-03T19:15:39.4842125Z Creating a generic function for ‘runmed’ from package ‘stats’ in package ‘IRanges’ 2021-06-03T19:15:43.3559255Z Creating a generic function for ‘smoothEnds’ from package ‘stats’ in package ‘IRanges’ 2021-06-03T19:15:43.3719647Z Creating a generic function for ‘chartr’ from package ‘base’ in package ‘IRanges’ 2021-06-03T19:15:43.3802155Z Creating a generic function for ‘tolower’ from package ‘base’ in package ‘IRanges’ 2021-06-03T19:15:43.3886109Z Creating a generic function for ‘toupper’ from package ‘base’ in package ‘IRanges’ 2021-06-03T19:15:43.3968951Z Creating a generic function for ‘sub’ from package ‘base’ in package ‘IRanges’ 2021-06-03T19:15:43.4097594Z Creating a generic function for ‘gsub’ from package ‘base’ in package ‘IRanges’ 2021-06-03T19:16:05.6768212Z ** help 2021-06-03T19:16:06.0039581Z *** installing help indices 2021-06-03T19:16:06.1906261Z ** building package indices 2021-06-03T19:16:06.3710458Z ** installing vignettes 2021-06-03T19:16:06.3774722Z ** testing if installed package can be loaded 2021-06-03T19:16:07.9747113Z * DONE (IRanges) 2021-06-03T19:16:08.2038801Z * installing *binary* package ‘futile.logger’ ... 2021-06-03T19:16:08.2082866Z * DONE (futile.logger) 2021-06-03T19:16:08.5492768Z * installing *source* package ‘BiocParallel’ ... 2021-06-03T19:16:08.6900671Z checking for gcc... gcc 2021-06-03T19:16:08.7741528Z checking whether the C compiler works... yes 2021-06-03T19:16:08.7742852Z checking for C compiler default output file name... a.out 2021-06-03T19:16:08.8159828Z checking for suffix of executables... 2021-06-03T19:16:08.8606093Z checking whether we are cross compiling... no 2021-06-03T19:16:08.8875702Z checking for suffix of object files... o 2021-06-03T19:16:08.9110203Z checking whether we are using the GNU C compiler... yes 2021-06-03T19:16:08.9331859Z checking whether gcc accepts -g... yes 2021-06-03T19:16:08.9742411Z checking for gcc option to accept ISO C89... none needed 2021-06-03T19:16:09.0210690Z checking for shm_open in -lrt... yes 2021-06-03T19:16:09.0428820Z configure: creating ./config.status 2021-06-03T19:16:09.1385191Z config.status: creating src/Makevars 2021-06-03T19:16:09.2052316Z ** libs 2021-06-03T19:16:09.2116026Z g++ -std=gnu++11 -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/BH/include" -I/usr/local/include -fpic -g -O2 -c ipcmutex.cpp -o ipcmutex.o 2021-06-03T19:16:18.8540497Z g++ -std=gnu++11 -shared -L/opt/R/3.5.3/lib/R/lib -L/usr/local/lib -o BiocParallel.so ipcmutex.o -lrt -L/opt/R/3.5.3/lib/R/lib -lR 2021-06-03T19:16:18.9568450Z installing to /home/runner/work/_temp/Library/BiocParallel/libs 2021-06-03T19:16:18.9612633Z ** R 2021-06-03T19:16:18.9773575Z ** inst 2021-06-03T19:16:18.9809321Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:16:22.1997781Z ** help 2021-06-03T19:16:22.3511074Z *** installing help indices 2021-06-03T19:16:22.4413184Z ** building package indices 2021-06-03T19:16:22.5217256Z ** installing vignettes 2021-06-03T19:16:22.5277369Z ** testing if installed package can be loaded 2021-06-03T19:16:22.7869216Z * DONE (BiocParallel) 2021-06-03T19:16:23.0769941Z * installing *source* package ‘XVector’ ... 2021-06-03T19:16:23.0932823Z ** libs 2021-06-03T19:16:23.1002892Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c IRanges_stubs.c -o IRanges_stubs.o 2021-06-03T19:16:23.2609986Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c Ocopy_byteblocks.c -o Ocopy_byteblocks.o 2021-06-03T19:16:23.4664417Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c RDS_random_access.c -o RDS_random_access.o 2021-06-03T19:16:23.7380033Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c R_init_XVector.c -o R_init_XVector.o 2021-06-03T19:16:23.7971989Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c S4Vectors_stubs.c -o S4Vectors_stubs.o 2021-06-03T19:16:24.2027433Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c SharedDouble_class.c -o SharedDouble_class.o 2021-06-03T19:16:24.2809835Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c SharedInteger_class.c -o SharedInteger_class.o 2021-06-03T19:16:24.3624890Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c SharedRaw_class.c -o SharedRaw_class.o 2021-06-03T19:16:24.5226118Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c SharedVector_class.c -o SharedVector_class.o 2021-06-03T19:16:24.6932586Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c XRawList_comparison.c -o XRawList_comparison.o 2021-06-03T19:16:24.8876131Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c XVectorList_class.c -o XVectorList_class.o 2021-06-03T19:16:25.0952206Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c XVector_class.c -o XVector_class.o 2021-06-03T19:16:25.1852095Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c io_utils.c -o io_utils.o 2021-06-03T19:16:25.3661234Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c slice_methods.c -o slice_methods.o 2021-06-03T19:16:25.4619655Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c vector_copy.c -o vector_copy.o 2021-06-03T19:16:25.5792666Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c view_summarization_methods.c -o view_summarization_methods.o 2021-06-03T19:16:25.7950971Z gcc -shared -L/opt/R/3.5.3/lib/R/lib -L/usr/local/lib -o XVector.so IRanges_stubs.o Ocopy_byteblocks.o RDS_random_access.o R_init_XVector.o S4Vectors_stubs.o SharedDouble_class.o SharedInteger_class.o SharedRaw_class.o SharedVector_class.o XRawList_comparison.o XVectorList_class.o XVector_class.o io_utils.o slice_methods.o vector_copy.o view_summarization_methods.o -lz -L/opt/R/3.5.3/lib/R/lib -lR 2021-06-03T19:16:25.8350180Z installing to /home/runner/work/_temp/Library/XVector/libs 2021-06-03T19:16:25.8351415Z ** R 2021-06-03T19:16:25.8544155Z ** inst 2021-06-03T19:16:25.8559654Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:16:31.9654219Z ** help 2021-06-03T19:16:32.0234624Z *** installing help indices 2021-06-03T19:16:32.0792027Z ** building package indices 2021-06-03T19:16:32.1188228Z ** testing if installed package can be loaded 2021-06-03T19:16:33.8749024Z * DONE (XVector) 2021-06-03T19:16:34.3178405Z * installing *source* package ‘GenomeInfoDb’ ... 2021-06-03T19:16:34.3370903Z ** R 2021-06-03T19:16:34.3566379Z ** inst 2021-06-03T19:16:34.3663287Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:16:39.0511289Z ** help 2021-06-03T19:16:39.1116600Z *** installing help indices 2021-06-03T19:16:39.1610322Z ** building package indices 2021-06-03T19:16:39.1958216Z ** installing vignettes 2021-06-03T19:16:39.2001382Z ** testing if installed package can be loaded 2021-06-03T19:16:41.0064154Z * DONE (GenomeInfoDb) 2021-06-03T19:16:41.3606514Z * installing *binary* package ‘bookdown’ ... 2021-06-03T19:16:41.3701382Z * DONE (bookdown) 2021-06-03T19:16:41.6957740Z * installing *source* package ‘DelayedArray’ ... 2021-06-03T19:16:41.7145663Z ** libs 2021-06-03T19:16:41.7204997Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c R_init_DelayedArray.c -o R_init_DelayedArray.o 2021-06-03T19:16:41.7668797Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c S4Vectors_stubs.c -o S4Vectors_stubs.o 2021-06-03T19:16:42.1609244Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I/usr/local/include -fpic -g -O2 -c abind.c -o abind.o 2021-06-03T19:16:42.2471685Z gcc -shared -L/opt/R/3.5.3/lib/R/lib -L/usr/local/lib -o DelayedArray.so R_init_DelayedArray.o S4Vectors_stubs.o abind.o -L/opt/R/3.5.3/lib/R/lib -lR 2021-06-03T19:16:42.2749570Z installing to /home/runner/work/_temp/Library/DelayedArray/libs 2021-06-03T19:16:42.2753356Z ** R 2021-06-03T19:16:42.3197897Z ** inst 2021-06-03T19:16:42.3231582Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:16:43.9360037Z Creating a new generic function for ‘aperm’ in package ‘DelayedArray’ 2021-06-03T19:16:44.1369494Z in method for ‘coerce’ with signature ‘"dgCMatrix","SparseArraySeed"’: no definition for class “dgCMatrix” 2021-06-03T19:16:44.1406494Z in method for ‘coerce’ with signature ‘"SparseArraySeed","dgCMatrix"’: no definition for class “dgCMatrix” 2021-06-03T19:16:44.1445847Z in method for ‘coerce’ with signature ‘"SparseArraySeed","sparseMatrix"’: no definition for class “sparseMatrix” 2021-06-03T19:16:44.5042168Z in method for ‘coerce’ with signature ‘"DelayedMatrix","dgCMatrix"’: no definition for class “dgCMatrix” 2021-06-03T19:16:44.5080567Z in method for ‘coerce’ with signature ‘"DelayedMatrix","sparseMatrix"’: no definition for class “sparseMatrix” 2021-06-03T19:16:44.6573586Z Creating a generic function for ‘sweep’ from package ‘base’ in package ‘DelayedArray’ 2021-06-03T19:16:44.7839051Z Creating a new generic function for ‘apply’ in package ‘DelayedArray’ 2021-06-03T19:16:44.7931948Z Creating a generic function for ‘dnorm’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-03T19:16:44.7973980Z Creating a generic function for ‘pnorm’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-03T19:16:44.8020749Z Creating a generic function for ‘qnorm’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-03T19:16:44.8061288Z Creating a generic function for ‘dbinom’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-03T19:16:44.8104890Z Creating a generic function for ‘pbinom’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-03T19:16:44.8150394Z Creating a generic function for ‘qbinom’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-03T19:16:44.8192507Z Creating a generic function for ‘dpois’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-03T19:16:44.8232440Z Creating a generic function for ‘ppois’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-03T19:16:44.8277110Z Creating a generic function for ‘qpois’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-03T19:16:44.8321679Z Creating a generic function for ‘dlogis’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-03T19:16:44.8364484Z Creating a generic function for ‘plogis’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-03T19:16:44.8410008Z Creating a generic function for ‘qlogis’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-03T19:16:44.8488912Z Creating a new generic function for ‘rowMaxs’ in package ‘DelayedArray’ 2021-06-03T19:16:44.8517312Z Creating a new generic function for ‘colMaxs’ in package ‘DelayedArray’ 2021-06-03T19:16:44.8581490Z Creating a new generic function for ‘rowMins’ in package ‘DelayedArray’ 2021-06-03T19:16:44.8608787Z Creating a new generic function for ‘colMins’ in package ‘DelayedArray’ 2021-06-03T19:16:44.8711152Z Creating a new generic function for ‘rowRanges’ in package ‘DelayedArray’ 2021-06-03T19:16:44.8733721Z Creating a new generic function for ‘colRanges’ in package ‘DelayedArray’ 2021-06-03T19:16:54.5259011Z ** help 2021-06-03T19:16:54.6407890Z *** installing help indices 2021-06-03T19:16:54.7301129Z ** building package indices 2021-06-03T19:16:54.7970293Z ** installing vignettes 2021-06-03T19:16:54.8030481Z ** testing if installed package can be loaded 2021-06-03T19:16:56.9402567Z * DONE (DelayedArray) 2021-06-03T19:16:57.3040014Z * installing *source* package ‘GenomicRanges’ ... 2021-06-03T19:16:57.3306550Z ** libs 2021-06-03T19:16:57.3369495Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c IRanges_stubs.c -o IRanges_stubs.o 2021-06-03T19:16:57.5022193Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c R_init_GenomicRanges.c -o R_init_GenomicRanges.o 2021-06-03T19:16:57.5455074Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c S4Vectors_stubs.c -o S4Vectors_stubs.o 2021-06-03T19:16:57.9354125Z gcc -I"/opt/R/3.5.3/lib/R/include" -DNDEBUG -I"/home/runner/work/_temp/Library/S4Vectors/include" -I"/home/runner/work/_temp/Library/IRanges/include" -I/usr/local/include -fpic -g -O2 -c transcript_utils.c -o transcript_utils.o 2021-06-03T19:16:58.0536770Z gcc -shared -L/opt/R/3.5.3/lib/R/lib -L/usr/local/lib -o GenomicRanges.so IRanges_stubs.o R_init_GenomicRanges.o S4Vectors_stubs.o transcript_utils.o -L/opt/R/3.5.3/lib/R/lib -lR 2021-06-03T19:16:58.0789478Z installing to /home/runner/work/_temp/Library/GenomicRanges/libs 2021-06-03T19:16:58.0799403Z ** R 2021-06-03T19:16:58.1158074Z ** inst 2021-06-03T19:16:58.1213827Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:17:10.2125790Z ** help 2021-06-03T19:17:10.3858098Z *** installing help indices 2021-06-03T19:17:10.4947339Z ** building package indices 2021-06-03T19:17:10.5805406Z ** installing vignettes 2021-06-03T19:17:10.5853939Z ** testing if installed package can be loaded 2021-06-03T19:17:12.8359216Z * DONE (GenomicRanges) 2021-06-03T19:17:13.1613482Z * installing *source* package ‘BiocStyle’ ... 2021-06-03T19:17:13.1764887Z ** R 2021-06-03T19:17:13.1868730Z ** inst 2021-06-03T19:17:13.1921812Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:17:13.8162660Z ** help 2021-06-03T19:17:13.8447379Z *** installing help indices 2021-06-03T19:17:13.8755486Z ** building package indices 2021-06-03T19:17:13.8976530Z ** installing vignettes 2021-06-03T19:17:13.9017931Z ** testing if installed package can be loaded 2021-06-03T19:17:14.1821734Z * DONE (BiocStyle) 2021-06-03T19:17:14.5667166Z * installing *source* package ‘SummarizedExperiment’ ... 2021-06-03T19:17:14.5873700Z ** R 2021-06-03T19:17:14.6024393Z ** inst 2021-06-03T19:17:14.6093557Z ** byte-compile and prepare package for lazy loading 2021-06-03T19:17:27.3458046Z ** help 2021-06-03T19:17:27.4157956Z *** installing help indices 2021-06-03T19:17:27.4658075Z ** building package indices 2021-06-03T19:17:27.5127856Z ** installing vignettes 2021-06-03T19:17:27.5176366Z ** testing if installed package can be loaded 2021-06-03T19:17:32.4298257Z * DONE (SummarizedExperiment) 2021-06-03T19:17:32.4556260Z 2021-06-03T19:17:32.4557372Z The downloaded source packages are in 2021-06-03T19:17:32.4559588Z ‘/tmp/RtmpKPqCiy/downloaded_packages’ 2021-06-03T19:17:49.2340665Z Skipping install of 'rcmdcheck' from a cran remote, the SHA1 (1.3.3) has not changed since last install. 2021-06-03T19:17:49.2341997Z Use `force = TRUE` to force installation 2021-06-03T19:17:49.2357015Z Skipping install of 'markdown' from a cran remote, the SHA1 (1.1) has not changed since last install. 2021-06-03T19:17:49.2357961Z Use `force = TRUE` to force installation 2021-06-03T19:17:49.2564242Z ##[group]Run options(width = 100) 2021-06-03T19:17:49.2564884Z options(width = 100) 2021-06-03T19:17:49.2565500Z pkgs <- installed.packages()[, "Package"] 2021-06-03T19:17:49.2566723Z sessioninfo::session_info(pkgs, include_base = TRUE) 2021-06-03T19:17:49.2575352Z shell: /usr/local/bin/Rscript {0} 2021-06-03T19:17:49.2575791Z env: 2021-06-03T19:17:49.2576257Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:17:49.2577733Z TIC_DEPLOY_KEY: 2021-06-03T19:17:49.2578644Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:17:49.2580687Z GITHUB_PAT: *** 2021-06-03T19:17:49.2581711Z COVERALLS_TOKEN: *** 2021-06-03T19:17:49.2582244Z continue-on-error: false 2021-06-03T19:17:49.2582767Z VDIFFR_RUN_TESTS: 2021-06-03T19:17:49.2583293Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-03T19:17:49.2583763Z TZ: UTC 2021-06-03T19:17:49.2584186Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-03T19:17:49.2584678Z NOT_CRAN: true 2021-06-03T19:17:49.2585088Z ##[endgroup] 2021-06-03T19:17:49.8232512Z ─ Session info ─────────────────────────────────────────────────────────────────────────────────── 2021-06-03T19:17:49.8233108Z setting value 2021-06-03T19:17:49.8233834Z version R version 3.5.3 (2019-03-11) 2021-06-03T19:17:49.8234333Z os Ubuntu 20.04.2 LTS 2021-06-03T19:17:49.8235001Z system x86_64, linux-gnu 2021-06-03T19:17:49.8235469Z ui X11 2021-06-03T19:17:49.8235958Z language (EN) 2021-06-03T19:17:49.8236795Z collate C.UTF-8 2021-06-03T19:17:49.8238520Z ctype C.UTF-8 2021-06-03T19:17:49.8239055Z tz UTC 2021-06-03T19:17:49.8239731Z date 2021-06-03 2021-06-03T19:17:49.8240012Z 2021-06-03T19:17:49.8241121Z ─ Packages ─────────────────────────────────────────────────────────────────────────────────────── 2021-06-03T19:17:49.8241880Z package * version date lib source 2021-06-03T19:17:49.8242916Z aghast 0.2.1 2021-06-03 [1] Github (muschellij2/aghast@0c3b853) 2021-06-03T19:17:49.8243896Z askpass 1.1 2019-01-13 [1] RSPM (R 3.5.3) 2021-06-03T19:17:49.8244777Z base * 3.5.3 2021-02-17 [2] local 2021-06-03T19:17:49.8245654Z base64enc 0.1-3 2015-07-28 [1] RSPM (R 3.5.3) 2021-06-03T19:17:49.8246896Z BH 1.75.0-0 2021-01-11 [1] RSPM (R 3.5.3) 2021-06-03T19:17:49.8247812Z Biobase 2.42.0 2018-10-30 [1] Bioconductor 2021-06-03T19:17:49.8248970Z BiocGenerics 0.28.0 2018-10-30 [1] Bioconductor 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2021-06-03T19:17:49.8391521Z 2021-06-03T19:17:49.8392363Z [1] /home/runner/work/_temp/Library 2021-06-03T19:17:49.8392943Z [2] /opt/R/3.5.3/lib/R/library 2021-06-03T19:17:49.8427809Z ##[group]Run Rscript -e 'tic::script()' 2021-06-03T19:17:49.8428726Z Rscript -e 'tic::script()' 2021-06-03T19:17:49.8429198Z ls -l check 2021-06-03T19:17:49.8474615Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-06-03T19:17:49.8475149Z env: 2021-06-03T19:17:49.8475691Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:17:49.8476237Z TIC_DEPLOY_KEY: 2021-06-03T19:17:49.8477077Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:17:49.8478768Z GITHUB_PAT: *** 2021-06-03T19:17:49.8479769Z COVERALLS_TOKEN: *** 2021-06-03T19:17:49.8480321Z continue-on-error: false 2021-06-03T19:17:49.8480866Z VDIFFR_RUN_TESTS: 2021-06-03T19:17:49.8481408Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-03T19:17:49.8495334Z TZ: UTC 2021-06-03T19:17:49.8495726Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-03T19:17:49.8496299Z NOT_CRAN: true 2021-06-03T19:17:49.8496848Z ##[endgroup] 2021-06-03T19:17:50.1538599Z ✔ Loading tic stage configuration from tic.R 2021-06-03T19:17:50.3056197Z Running script: step_rcmdcheck(warnings_are_errors = NULL, notes_are_errors = NULL, 2021-06-03T19:17:50.3058135Z args = args, build_args = NULL, error_on = error_on, repos = repo_default(), 2021-06-03T19:17:50.3058960Z timeout = Inf, check_dir = "check") 2021-06-03T19:17:50.3791631Z ── R CMD build ───────────────────────────────────────────────────────────────── 2021-06-03T19:17:50.6063472Z * checking for file ‘.../DESCRIPTION’ ... OK 2021-06-03T19:17:50.6179475Z * preparing ‘neuroCombatData’: 2021-06-03T19:17:50.6294433Z * checking DESCRIPTION meta-information ... OK 2021-06-03T19:17:50.6845581Z * checking for LF line-endings in source and make files and shell scripts 2021-06-03T19:17:50.6851658Z * checking for empty or unneeded directories 2021-06-03T19:17:50.6858130Z * looking to see if a ‘data/datalist’ file should be added 2021-06-03T19:17:50.6885383Z * building ‘neuroCombatData_0.99.0.tar.gz’ 2021-06-03T19:17:50.7468219Z 2021-06-03T19:17:50.8689154Z ── R CMD check ───────────────────────────────────────────────────────────────── 2021-06-03T19:17:51.0927120Z * using log directory ‘/home/runner/work/neuroCombatData/neuroCombatData/check/neuroCombatData.Rcheck’ 2021-06-03T19:17:51.0945717Z * using R version 3.5.3 (2019-03-11) 2021-06-03T19:17:51.0947247Z * using platform: x86_64-pc-linux-gnu (64-bit) 2021-06-03T19:17:51.0948929Z * using session charset: UTF-8 2021-06-03T19:17:51.1372262Z * using option ‘--as-cran’ 2021-06-03T19:17:51.1396418Z * checking for file ‘neuroCombatData/DESCRIPTION’ ... OK 2021-06-03T19:17:51.1398728Z * this is package ‘neuroCombatData’ version ‘0.99.0’ 2021-06-03T19:17:51.1400418Z * package encoding: UTF-8 2021-06-03T19:17:51.1420423Z * checking package namespace information ... OK 2021-06-03T19:18:09.0486839Z * checking package dependencies ... OK 2021-06-03T19:18:09.0499082Z * checking if this is a source package ... OK 2021-06-03T19:18:09.0500379Z * checking if there is a namespace ... OK 2021-06-03T19:18:09.2698198Z * checking for executable files ... OK 2021-06-03T19:18:09.2699609Z * checking for hidden files and directories ... NOTE 2021-06-03T19:18:09.2700924Z Found the following hidden files and directories: 2021-06-03T19:18:09.2701919Z .travis.yml 2021-06-03T19:18:09.2703458Z These were most likely included in error. See section ‘Package 2021-06-03T19:18:09.2704556Z structure’ in the ‘Writing R Extensions’ manual. 2021-06-03T19:18:09.2714398Z * checking for portable file names ... OK 2021-06-03T19:18:09.2731231Z * checking for sufficient/correct file permissions ... OK 2021-06-03T19:18:09.4792234Z * checking whether package ‘neuroCombatData’ can be installed ... ERROR 2021-06-03T19:18:09.4797888Z ##[error]Installation failed. 2021-06-03T19:18:09.4810255Z See ‘/home/runner/work/neuroCombatData/neuroCombatData/check/neuroCombatData.Rcheck/00install.out’ for details. 2021-06-03T19:18:09.4811437Z * DONE 2021-06-03T19:18:09.4811661Z 2021-06-03T19:18:09.4812067Z Status: 1 ERROR, 1 NOTE 2021-06-03T19:18:09.4812597Z See 2021-06-03T19:18:09.4813821Z ‘/home/runner/work/neuroCombatData/neuroCombatData/check/neuroCombatData.Rcheck/00check.log’ 2021-06-03T19:18:09.4814658Z for details. 2021-06-03T19:18:09.4815083Z 2021-06-03T19:18:09.4979274Z ── R CMD check results ───────────────────────────── neuroCombatData 0.99.0 ──── 2021-06-03T19:18:10.2952846Z ##[error]Error: A step failed in stage "script": script. 2021-06-03T19:18:10.2954282Z Duration: 18.7s 2021-06-03T19:18:10.2962706Z Execution halted 2021-06-03T19:18:10.2963012Z 2021-06-03T19:18:10.2966460Z ❯ checking whether package ‘neuroCombatData’ can be installed ... ERROR 2021-06-03T19:18:10.2968349Z ##[error] See below... 2021-06-03T19:18:10.2970783Z 2021-06-03T19:18:10.2972049Z ❯ checking for hidden files and directories ... NOTE 2021-06-03T19:18:10.2973645Z Found the following hidden files and directories: 2021-06-03T19:18:10.2974577Z .travis.yml 2021-06-03T19:18:10.2975953Z These were most likely included in error. See section ‘Package 2021-06-03T19:18:10.2977142Z structure’ in the ‘Writing R Extensions’ manual. 2021-06-03T19:18:10.2977674Z 2021-06-03T19:18:10.2978635Z ── Install failure ───────────────────────────────────────────────────────────── 2021-06-03T19:18:10.2979121Z 2021-06-03T19:18:10.2980173Z ERROR: this R is version 3.5.3, package 'neuroCombatData' requires R >= 3.6.0 2021-06-03T19:18:10.2980790Z 2021-06-03T19:18:10.2981618Z 1 error ✖ | 0 warnings ✔ | 1 note ✖ 2021-06-03T19:18:10.2982271Z 2021-06-03T19:18:10.2983105Z Errors found in rcmdcheck::rcmdcheck(). 2021-06-03T19:18:10.2983738Z Backtrace: 2021-06-03T19:18:10.2984270Z 1. tic::script() 2021-06-03T19:18:10.2984928Z 2. tic::run_stage("script", stages = stages) 2021-06-03T19:18:10.2985698Z 3. stage$run_all() 2021-06-03T19:18:10.2986238Z 4. private$run_one(step) 2021-06-03T19:18:10.2986768Z 11. step$run() 2021-06-03T19:18:10.2987890Z 12. tic:::stopc("Errors found in rcmdcheck::rcmdcheck().") 2021-06-03T19:18:10.2995324Z ##[error]Process completed with exit code 1. 2021-06-03T19:18:10.3043277Z ##[group]Run find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-06-03T19:18:10.3044095Z find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-06-03T19:18:10.3093244Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-06-03T19:18:10.3093950Z env: 2021-06-03T19:18:10.3094782Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:18:10.3095268Z TIC_DEPLOY_KEY: 2021-06-03T19:18:10.3096338Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:18:10.3098437Z GITHUB_PAT: *** 2021-06-03T19:18:10.3099270Z COVERALLS_TOKEN: *** 2021-06-03T19:18:10.3099788Z continue-on-error: false 2021-06-03T19:18:10.3100278Z VDIFFR_RUN_TESTS: 2021-06-03T19:18:10.3100759Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-03T19:18:10.3101215Z TZ: UTC 2021-06-03T19:18:10.3101598Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-03T19:18:10.3102035Z NOT_CRAN: true 2021-06-03T19:18:10.3102422Z ##[endgroup] 2021-06-03T19:18:10.3275127Z ##[group]Run actions/upload-artifact@master 2021-06-03T19:18:10.3275663Z with: 2021-06-03T19:18:10.3276090Z name: Linux-r3.5-results 2021-06-03T19:18:10.3276525Z path: check 2021-06-03T19:18:10.3276972Z if-no-files-found: warn 2021-06-03T19:18:10.3277404Z env: 2021-06-03T19:18:10.3277831Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-03T19:18:10.3278312Z TIC_DEPLOY_KEY: 2021-06-03T19:18:10.3279128Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-03T19:18:10.3280470Z GITHUB_PAT: *** 2021-06-03T19:18:10.3281299Z COVERALLS_TOKEN: *** 2021-06-03T19:18:10.3281789Z continue-on-error: false 2021-06-03T19:18:10.3282276Z VDIFFR_RUN_TESTS: 2021-06-03T19:18:10.3282770Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-03T19:18:10.3283210Z TZ: UTC 2021-06-03T19:18:10.3283691Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-03T19:18:10.3284267Z NOT_CRAN: true 2021-06-03T19:18:10.3284651Z ##[endgroup] 2021-06-03T19:18:10.4054607Z With the provided path, there will be 18 files uploaded 2021-06-03T19:18:15.5708843Z Total size of all the files uploaded is 1400973 bytes 2021-06-03T19:18:15.6734373Z Finished uploading artifact Linux-r3.5-results. Reported size is 1400973 bytes. There were 0 items that failed to upload 2021-06-03T19:18:15.6735830Z Artifact Linux-r3.5-results has been successfully uploaded! 2021-06-03T19:18:15.6997989Z Post job cleanup. 2021-06-03T19:18:15.8230426Z [command]/usr/bin/git version 2021-06-03T19:18:15.8301979Z git version 2.31.1 2021-06-03T19:18:15.8346241Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-06-03T19:18:15.8385034Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-06-03T19:18:15.8651068Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-06-03T19:18:15.8683040Z http.https://github.com/.extraheader 2021-06-03T19:18:15.8696180Z [command]/usr/bin/git config --local --unset-all http.https://github.com/.extraheader 2021-06-03T19:18:15.8740981Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-06-03T19:18:15.9104652Z Cleaning up orphan processes