2021-05-17T16:31:21.1262354Z ##[section]Starting: Request a runner to run this job 2021-05-17T16:31:21.5733839Z Can't find any online and idle self-hosted runner in current repository that matches the required labels: 'ubuntu-20.04' 2021-05-17T16:31:21.6423048Z Can't find any online and idle self-hosted runner in current repository's organization/enterprise account that matches the required labels: 'ubuntu-20.04' 2021-05-17T16:31:21.7136433Z Found online and idle hosted runner in current repository's enterprise account that matches the required labels: 'ubuntu-20.04' 2021-05-17T16:31:21.8143276Z ##[section]Finishing: Request a runner to run this job 2021-05-17T16:31:41.1479278Z Current runner version: '2.278.0' 2021-05-17T16:31:41.1508943Z ##[group]Operating System 2021-05-17T16:31:41.1510196Z Ubuntu 2021-05-17T16:31:41.1510586Z 20.04.2 2021-05-17T16:31:41.1511212Z LTS 2021-05-17T16:31:41.1511673Z ##[endgroup] 2021-05-17T16:31:41.1512328Z ##[group]Virtual Environment 2021-05-17T16:31:41.1512961Z Environment: ubuntu-20.04 2021-05-17T16:31:41.1513784Z Version: 20210510.0 2021-05-17T16:31:41.1515144Z Included Software: https://github.com/actions/virtual-environments/blob/ubuntu20/20210510.0/images/linux/Ubuntu2004-README.md 2021-05-17T16:31:41.1516530Z Image Release: https://github.com/actions/virtual-environments/releases/tag/ubuntu20%2F20210510.0 2021-05-17T16:31:41.1517473Z ##[endgroup] 2021-05-17T16:31:41.1519965Z ##[group]GITHUB_TOKEN Permissions 2021-05-17T16:31:41.1521313Z Actions: write 2021-05-17T16:31:41.1521978Z Checks: write 2021-05-17T16:31:41.1522426Z Contents: write 2021-05-17T16:31:41.1522906Z Deployments: write 2021-05-17T16:31:41.1523499Z Issues: write 2021-05-17T16:31:41.1524012Z Metadata: read 2021-05-17T16:31:41.1524470Z Packages: write 2021-05-17T16:31:41.1524912Z PullRequests: write 2021-05-17T16:31:41.1525640Z RepositoryProjects: write 2021-05-17T16:31:41.1526418Z SecurityEvents: write 2021-05-17T16:31:41.1526978Z Statuses: write 2021-05-17T16:31:41.1527635Z ##[endgroup] 2021-05-17T16:31:41.1530986Z Prepare workflow directory 2021-05-17T16:31:41.2705247Z Prepare all required actions 2021-05-17T16:31:41.2718023Z Getting action download info 2021-05-17T16:31:41.7309356Z Download action repository 'actions/checkout@v2' 2021-05-17T16:31:44.0397475Z Download action repository 'r-lib/actions@master' 2021-05-17T16:31:45.1660597Z Download action repository 'adigherman/actions@master' 2021-05-17T16:31:47.0688662Z Download action repository 'msys2/setup-msys2@v2' 2021-05-17T16:31:47.3819118Z Download action repository 'actions/cache@v1' 2021-05-17T16:31:47.6857307Z Download action repository 'actions/upload-artifact@master' 2021-05-17T16:31:47.9636427Z Download action repository 'actions/upload-release-asset@v1.0.1' 2021-05-17T16:31:48.4109097Z ##[group]Run actions/checkout@v2 2021-05-17T16:31:48.4110097Z with: 2021-05-17T16:31:48.4110551Z repository: neuroconductor/penn115 2021-05-17T16:31:48.4112941Z token: *** 2021-05-17T16:31:48.4113380Z ssh-strict: true 2021-05-17T16:31:48.4113916Z persist-credentials: true 2021-05-17T16:31:48.4114425Z clean: true 2021-05-17T16:31:48.4114842Z fetch-depth: 1 2021-05-17T16:31:48.4115393Z lfs: false 2021-05-17T16:31:48.4115953Z submodules: false 2021-05-17T16:31:48.4116476Z env: 2021-05-17T16:31:48.4117204Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:31:48.4117632Z TIC_DEPLOY_KEY: 2021-05-17T16:31:48.4118349Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:31:48.4119425Z GITHUB_PAT: *** 2021-05-17T16:31:48.4120150Z COVERALLS_TOKEN: *** 2021-05-17T16:31:48.4120583Z continue-on-error: true 2021-05-17T16:31:48.4121016Z VDIFFR_RUN_TESTS: 2021-05-17T16:31:48.4121360Z ##[endgroup] 2021-05-17T16:31:48.6270932Z Syncing repository: neuroconductor/penn115 2021-05-17T16:31:48.6271819Z ##[group]Getting Git version info 2021-05-17T16:31:48.6272702Z Working directory is '/home/runner/work/penn115/penn115' 2021-05-17T16:31:48.6339049Z [command]/usr/bin/git version 2021-05-17T16:31:48.6500584Z git version 2.31.1 2021-05-17T16:31:48.6557643Z ##[endgroup] 2021-05-17T16:31:48.6565774Z Deleting the contents of '/home/runner/work/penn115/penn115' 2021-05-17T16:31:48.6570688Z ##[group]Initializing the repository 2021-05-17T16:31:48.6575116Z [command]/usr/bin/git init /home/runner/work/penn115/penn115 2021-05-17T16:31:48.6657557Z hint: Using 'master' as the name for the initial branch. This default branch name 2021-05-17T16:31:48.6658995Z hint: is subject to change. To configure the initial branch name to use in all 2021-05-17T16:31:48.6660641Z hint: of your new repositories, which will suppress this warning, call: 2021-05-17T16:31:48.6661292Z hint: 2021-05-17T16:31:48.6662349Z hint: git config --global init.defaultBranch 2021-05-17T16:31:48.6663268Z hint: 2021-05-17T16:31:48.6664523Z hint: Names commonly chosen instead of 'master' are 'main', 'trunk' and 2021-05-17T16:31:48.6666021Z hint: 'development'. The just-created branch can be renamed via this command: 2021-05-17T16:31:48.6666697Z hint: 2021-05-17T16:31:48.6667303Z hint: git branch -m 2021-05-17T16:31:48.6670884Z Initialized empty Git repository in /home/runner/work/penn115/penn115/.git/ 2021-05-17T16:31:48.6682865Z [command]/usr/bin/git remote add origin https://github.com/neuroconductor/penn115 2021-05-17T16:31:48.6731031Z ##[endgroup] 2021-05-17T16:31:48.6731636Z ##[group]Disabling automatic garbage collection 2021-05-17T16:31:48.6740734Z [command]/usr/bin/git config --local gc.auto 0 2021-05-17T16:31:48.6780465Z ##[endgroup] 2021-05-17T16:31:48.6785557Z ##[group]Setting up auth 2021-05-17T16:31:48.6795051Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-05-17T16:31:48.6835029Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-05-17T16:31:48.7192229Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-05-17T16:31:48.7257079Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-05-17T16:31:48.7494176Z [command]/usr/bin/git config --local http.https://github.com/.extraheader AUTHORIZATION: basic *** 2021-05-17T16:31:48.7556808Z ##[endgroup] 2021-05-17T16:31:48.7557293Z ##[group]Fetching the repository 2021-05-17T16:31:48.7567868Z [command]/usr/bin/git -c protocol.version=2 fetch --no-tags --prune --progress --no-recurse-submodules --depth=1 origin +e45116b6ec21cdacff6cdff48c31dc256109b2bb:refs/tags/0.1.1.s 2021-05-17T16:31:50.1440977Z remote: Enumerating objects: 39, done. 2021-05-17T16:31:50.1442419Z remote: Counting objects: 2% (1/39) 2021-05-17T16:31:50.1442994Z remote: Counting objects: 5% (2/39) 2021-05-17T16:31:50.1443675Z remote: Counting objects: 7% (3/39) 2021-05-17T16:31:50.1444180Z remote: Counting objects: 10% (4/39) 2021-05-17T16:31:50.1444678Z remote: Counting objects: 12% (5/39) 2021-05-17T16:31:50.1445524Z remote: Counting objects: 15% (6/39) 2021-05-17T16:31:50.1445984Z remote: Counting objects: 17% (7/39) 2021-05-17T16:31:50.1446419Z remote: Counting objects: 20% (8/39) 2021-05-17T16:31:50.1446872Z remote: Counting objects: 23% (9/39) 2021-05-17T16:31:50.1447329Z remote: Counting objects: 25% (10/39) 2021-05-17T16:31:50.1447987Z remote: Counting objects: 28% (11/39) 2021-05-17T16:31:50.1448454Z remote: Counting objects: 30% (12/39) 2021-05-17T16:31:50.1448918Z remote: Counting objects: 33% (13/39) 2021-05-17T16:31:50.1449392Z remote: Counting objects: 35% (14/39) 2021-05-17T16:31:50.1449865Z remote: Counting objects: 38% (15/39) 2021-05-17T16:31:50.1450309Z remote: Counting objects: 41% (16/39) 2021-05-17T16:31:50.1450937Z remote: Counting objects: 43% (17/39) 2021-05-17T16:31:50.1451583Z remote: Counting objects: 46% (18/39) 2021-05-17T16:31:50.1452041Z remote: Counting objects: 48% (19/39) 2021-05-17T16:31:50.1452500Z remote: Counting objects: 51% (20/39) 2021-05-17T16:31:50.1453327Z remote: Counting objects: 53% (21/39) 2021-05-17T16:31:50.1453820Z remote: Counting objects: 56% (22/39) 2021-05-17T16:31:50.1454312Z remote: Counting objects: 58% (23/39) 2021-05-17T16:31:50.1454952Z remote: Counting objects: 61% (24/39) 2021-05-17T16:31:50.1455434Z remote: Counting objects: 64% (25/39) 2021-05-17T16:31:50.1455911Z remote: Counting objects: 66% (26/39) 2021-05-17T16:31:50.1456534Z remote: Counting objects: 69% (27/39) 2021-05-17T16:31:50.1457335Z remote: Counting objects: 71% (28/39) 2021-05-17T16:31:50.1457772Z remote: Counting objects: 74% (29/39) 2021-05-17T16:31:50.1458411Z remote: Counting objects: 76% (30/39) 2021-05-17T16:31:50.1458877Z remote: Counting objects: 79% (31/39) 2021-05-17T16:31:50.1459325Z remote: Counting objects: 82% (32/39) 2021-05-17T16:31:50.1459783Z remote: Counting objects: 84% (33/39) 2021-05-17T16:31:50.1460534Z remote: Counting objects: 87% (34/39) 2021-05-17T16:31:50.1461090Z remote: Counting objects: 89% (35/39) 2021-05-17T16:31:50.1461885Z remote: Counting objects: 92% (36/39) 2021-05-17T16:31:50.1462313Z remote: Counting objects: 94% (37/39) 2021-05-17T16:31:50.1463132Z remote: Counting objects: 97% (38/39) 2021-05-17T16:31:50.1463602Z remote: Counting objects: 100% (39/39) 2021-05-17T16:31:50.1464077Z remote: Counting objects: 100% (39/39), done. 2021-05-17T16:31:50.1464989Z remote: Compressing objects: 3% (1/33) 2021-05-17T16:31:50.1465579Z remote: Compressing objects: 6% (2/33) 2021-05-17T16:31:50.1466122Z remote: Compressing objects: 9% (3/33) 2021-05-17T16:31:50.1466664Z remote: Compressing objects: 12% (4/33) 2021-05-17T16:31:50.1467355Z remote: Compressing objects: 15% (5/33) 2021-05-17T16:31:50.1468059Z remote: Compressing objects: 18% (6/33) 2021-05-17T16:31:50.1468528Z remote: Compressing objects: 21% (7/33) 2021-05-17T16:31:50.1469007Z remote: Compressing objects: 24% (8/33) 2021-05-17T16:31:50.1469674Z remote: Compressing objects: 27% (9/33) 2021-05-17T16:31:50.1470155Z remote: Compressing objects: 30% (10/33) 2021-05-17T16:31:50.1470652Z remote: Compressing objects: 33% (11/33) 2021-05-17T16:31:50.1471148Z remote: Compressing objects: 36% (12/33) 2021-05-17T16:31:50.1471629Z remote: Compressing objects: 39% (13/33) 2021-05-17T16:31:50.1472232Z remote: Compressing objects: 42% (14/33) 2021-05-17T16:31:50.1472914Z remote: Compressing objects: 45% (15/33) 2021-05-17T16:31:50.1473401Z remote: Compressing objects: 48% (16/33) 2021-05-17T16:31:50.1474066Z remote: Compressing objects: 51% (17/33) 2021-05-17T16:31:50.1474547Z remote: Compressing objects: 54% (18/33) 2021-05-17T16:31:50.1475038Z remote: Compressing objects: 57% (19/33) 2021-05-17T16:31:50.1475512Z remote: Compressing objects: 60% (20/33) 2021-05-17T16:31:50.1476210Z remote: Compressing objects: 63% (21/33) 2021-05-17T16:31:50.1476715Z remote: Compressing objects: 66% (22/33) 2021-05-17T16:31:50.1477204Z remote: Compressing objects: 69% (23/33) 2021-05-17T16:31:50.1477876Z remote: Compressing objects: 72% (24/33) 2021-05-17T16:31:50.1478394Z remote: Compressing objects: 75% (25/33) 2021-05-17T16:31:50.1478872Z remote: Compressing objects: 78% (26/33) 2021-05-17T16:31:50.1479544Z remote: Compressing objects: 81% (27/33) 2021-05-17T16:31:50.1480647Z remote: Compressing objects: 84% (28/33) 2021-05-17T16:31:50.1523195Z remote: Compressing objects: 87% (29/33) 2021-05-17T16:31:50.1523788Z remote: Compressing objects: 90% (30/33) 2021-05-17T16:31:50.1524303Z remote: Compressing objects: 93% (31/33) 2021-05-17T16:31:50.1524801Z remote: Compressing objects: 96% (32/33) 2021-05-17T16:31:50.1525313Z remote: Compressing objects: 100% (33/33) 2021-05-17T16:31:50.1525829Z remote: Compressing objects: 100% (33/33), done. 2021-05-17T16:31:54.0199819Z remote: Total 39 (delta 0), reused 31 (delta 0), pack-reused 0 2021-05-17T16:31:54.1193245Z From https://github.com/neuroconductor/penn115 2021-05-17T16:31:54.1203482Z * [new ref] e45116b6ec21cdacff6cdff48c31dc256109b2bb -> 0.1.1.s 2021-05-17T16:31:54.1227773Z ##[endgroup] 2021-05-17T16:31:54.1233330Z ##[group]Determining the checkout info 2021-05-17T16:31:54.1238854Z ##[endgroup] 2021-05-17T16:31:54.1247034Z ##[group]Checking out the ref 2021-05-17T16:31:54.1248664Z [command]/usr/bin/git checkout --progress --force refs/tags/0.1.1.s 2021-05-17T16:31:54.2021090Z Note: switching to 'refs/tags/0.1.1.s'. 2021-05-17T16:31:54.2022887Z 2021-05-17T16:31:54.2028774Z You are in 'detached HEAD' state. You can look around, make experimental 2021-05-17T16:31:54.2030470Z changes and commit them, and you can discard any commits you make in this 2021-05-17T16:31:54.2045650Z state without impacting any branches by switching back to a branch. 2021-05-17T16:31:54.2046750Z 2021-05-17T16:31:54.2047805Z If you want to create a new branch to retain commits you create, you may 2021-05-17T16:31:54.2049290Z do so (now or later) by using -c with the switch command. Example: 2021-05-17T16:31:54.2050125Z 2021-05-17T16:31:54.2051342Z git switch -c 2021-05-17T16:31:54.2052135Z 2021-05-17T16:31:54.2052923Z Or undo this operation with: 2021-05-17T16:31:54.2053638Z 2021-05-17T16:31:54.2054865Z git switch - 2021-05-17T16:31:54.2055684Z 2021-05-17T16:31:54.2056759Z Turn off this advice by setting config variable advice.detachedHead to false 2021-05-17T16:31:54.2057738Z 2021-05-17T16:31:54.2058969Z HEAD is now at e45116b Version id 108 stable 2021-05-17T16:31:54.2060401Z ##[endgroup] 2021-05-17T16:31:54.2169427Z [command]/usr/bin/git log -1 --format='%H' 2021-05-17T16:31:54.2201399Z 'e45116b6ec21cdacff6cdff48c31dc256109b2bb' 2021-05-17T16:31:54.2360416Z ##[group]Run r-lib/actions/setup-r@master 2021-05-17T16:31:54.2360857Z with: 2021-05-17T16:31:54.2361173Z r-version: devel 2021-05-17T16:31:54.2361475Z Ncpus: 1 2021-05-17T16:31:54.2362182Z crayon.enabled: NULL 2021-05-17T16:31:54.2362825Z remove-openmp-macos: true 2021-05-17T16:31:54.2363319Z http-user-agent: default 2021-05-17T16:31:54.2363908Z install-r: true 2021-05-17T16:31:54.2364411Z windows-path-include-mingw: true 2021-05-17T16:31:54.2364940Z env: 2021-05-17T16:31:54.2365521Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:31:54.2366095Z TIC_DEPLOY_KEY: 2021-05-17T16:31:54.2366780Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:31:54.2368647Z GITHUB_PAT: *** 2021-05-17T16:31:54.2369358Z COVERALLS_TOKEN: *** 2021-05-17T16:31:54.2369783Z continue-on-error: true 2021-05-17T16:31:54.2370178Z VDIFFR_RUN_TESTS: 2021-05-17T16:31:54.2370515Z ##[endgroup] 2021-05-17T16:31:55.0873420Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive add-apt-repository -y ppa:cran/travis 2021-05-17T16:31:58.0618025Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-05-17T16:31:58.0620414Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease [114 kB] 2021-05-17T16:31:58.0622442Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease [101 kB] 2021-05-17T16:31:58.0834280Z Hit:4 https://download.mono-project.com/repo/ubuntu stable-focal InRelease 2021-05-17T16:31:58.1825006Z Get:5 http://security.ubuntu.com/ubuntu focal-security InRelease [109 kB] 2021-05-17T16:31:58.1964158Z Get:6 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease [10.5 kB] 2021-05-17T16:31:58.2523449Z Hit:7 http://ppa.launchpad.net/apt-fast/stable/ubuntu focal InRelease 2021-05-17T16:31:58.2907831Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 Packages [983 kB] 2021-05-17T16:31:58.3196201Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main Translation-en [222 kB] 2021-05-17T16:31:58.3200705Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 c-n-f Metadata [13.3 kB] 2021-05-17T16:31:58.3208472Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted amd64 Packages [226 kB] 2021-05-17T16:31:58.3240220Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted Translation-en [33.3 kB] 2021-05-17T16:31:58.3254509Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 Packages [774 kB] 2021-05-17T16:31:58.3358563Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe Translation-en [166 kB] 2021-05-17T16:31:58.3382814Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 c-n-f Metadata [17.4 kB] 2021-05-17T16:31:58.5342502Z Get:16 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease [18.0 kB] 2021-05-17T16:31:58.6948941Z Get:17 https://packages.microsoft.com/ubuntu/20.04/prod focal/main amd64 Packages [73.2 kB] 2021-05-17T16:31:58.8634515Z Get:18 http://security.ubuntu.com/ubuntu focal-security/main amd64 Packages [655 kB] 2021-05-17T16:31:58.9579086Z Hit:19 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-05-17T16:31:59.1401029Z Get:20 http://security.ubuntu.com/ubuntu focal-security/main Translation-en [132 kB] 2021-05-17T16:31:59.1483412Z Get:21 http://security.ubuntu.com/ubuntu focal-security/main amd64 c-n-f Metadata [7508 B] 2021-05-17T16:31:59.1493451Z Get:22 http://security.ubuntu.com/ubuntu focal-security/restricted amd64 Packages [203 kB] 2021-05-17T16:31:59.1627373Z Get:23 http://security.ubuntu.com/ubuntu focal-security/restricted Translation-en [29.7 kB] 2021-05-17T16:31:59.1652354Z Get:24 http://security.ubuntu.com/ubuntu focal-security/universe amd64 Packages [565 kB] 2021-05-17T16:31:59.2224769Z Get:25 http://security.ubuntu.com/ubuntu focal-security/universe amd64 c-n-f Metadata [11.0 kB] 2021-05-17T16:32:05.4966904Z Fetched 4463 kB in 1s (3281 kB/s) 2021-05-17T16:32:06.2808665Z Reading package lists... 2021-05-17T16:32:06.3053302Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get update -y -qq 2021-05-17T16:32:08.1788070Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get install -y gdebi-core qpdf devscripts 2021-05-17T16:32:08.2418984Z Reading package lists... 2021-05-17T16:32:08.3913342Z Building dependency tree... 2021-05-17T16:32:08.3930701Z Reading state information... 2021-05-17T16:32:08.5323372Z The following additional packages will be installed: 2021-05-17T16:32:08.5325163Z dctrl-tools diffstat dput gettext intltool-debian libapt-pkg-perl 2021-05-17T16:32:08.5326361Z libarchive-zip-perl libarray-intspan-perl libasync-mergepoint-perl 2021-05-17T16:32:08.5334288Z libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl 2021-05-17T16:32:08.5336165Z libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl 2021-05-17T16:32:08.5337449Z libcommon-sense-perl libconst-fast-perl libcontextual-return-perl 2021-05-17T16:32:08.5338790Z libcpanel-json-xs-perl libcroco3 libdata-optlist-perl 2021-05-17T16:32:08.5340104Z libdevel-callchecker-perl libdevel-size-perl libdigest-bubblebabble-perl 2021-05-17T16:32:08.5343078Z libdigest-hmac-perl libdistro-info-perl libdynaloader-functions-perl 2021-05-17T16:32:08.5344615Z libemail-valid-perl libexporter-tiny-perl libfile-chdir-perl 2021-05-17T16:32:08.5346386Z libfile-find-rule-perl libfile-homedir-perl libfile-which-perl 2021-05-17T16:32:08.5347616Z libfont-ttf-perl libfuture-perl libgetopt-long-descriptive-perl 2021-05-17T16:32:08.5349243Z libgit-wrapper-perl libgitlab-api-v4-perl libhash-fieldhash-perl 2021-05-17T16:32:08.5351342Z libhttp-tiny-multipart-perl libimport-into-perl libio-async-loop-epoll-perl 2021-05-17T16:32:08.5352685Z libio-async-perl libio-prompter-perl libio-pty-perl libio-string-perl 2021-05-17T16:32:08.5356351Z libipc-run-perl libjson-maybexs-perl libjson-perl libjson-xs-perl 2021-05-17T16:32:08.5358085Z liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl 2021-05-17T16:32:08.5359261Z liblist-someutils-perl liblist-someutils-xs-perl 2021-05-17T16:32:08.5360598Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-05-17T16:32:08.5362256Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-05-17T16:32:08.5363573Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-05-17T16:32:08.5365251Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-05-17T16:32:08.5366523Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-05-17T16:32:08.5368439Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-05-17T16:32:08.5369946Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-05-17T16:32:08.5371199Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-05-17T16:32:08.5372390Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-05-17T16:32:08.5373798Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-05-17T16:32:08.5375247Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-05-17T16:32:08.5376946Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-05-17T16:32:08.5378411Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-05-17T16:32:08.5379799Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-05-17T16:32:08.5381624Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-05-17T16:32:08.5383095Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-05-17T16:32:08.5384328Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-05-17T16:32:08.5390838Z libtype-tiny-perl libtype-tiny-xs-perl libtypes-serialiser-perl 2021-05-17T16:32:08.5392816Z libunicode-utf8-perl libvariable-magic-perl libwant-perl libxml-writer-perl 2021-05-17T16:32:08.5394069Z libyaml-libyaml-perl licensecheck lintian patchutils python3-gpg 2021-05-17T16:32:08.5395591Z python3-magic python3-unidiff python3-xdg t1utils wdiff 2021-05-17T16:32:08.5396470Z Suggested packages: 2021-05-17T16:32:08.5397280Z debtags adequate autopkgtest bls-standalone bsd-mailx | mailx 2021-05-17T16:32:08.5398303Z check-all-the-things cvs-buildpackage debhelper devscripts-el diffoscope 2021-05-17T16:32:08.5399912Z disorderfs dose-extra duck faketime gnuplot how-can-i-help libdbd-pg-perl 2021-05-17T16:32:08.5401136Z libnet-smtps-perl libterm-size-perl libyaml-syck-perl mozilla-devscripts 2021-05-17T16:32:08.5402935Z mutt piuparts quilt ratt reprotest svn-buildpackage w3m debian-keyring 2021-05-17T16:32:08.5403982Z equivs libsoap-lite-perl python3-paramiko mini-dinstall gettext-doc 2021-05-17T16:32:08.5405018Z autopoint libasprintf-dev libgettextpo-dev libossp-uuid-perl 2021-05-17T16:32:08.5406190Z libscalar-number-perl libbareword-filehandles-perl libindirect-perl 2021-05-17T16:32:08.5407719Z libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl 2021-05-17T16:32:08.5409073Z binutils-multiarch libtext-template-perl wdiff-doc 2021-05-17T16:32:09.0129120Z The following NEW packages will be installed: 2021-05-17T16:32:09.0131230Z dctrl-tools devscripts diffstat dput gdebi-core gettext intltool-debian 2021-05-17T16:32:09.0138529Z libapt-pkg-perl libarchive-zip-perl libarray-intspan-perl 2021-05-17T16:32:09.0139928Z libasync-mergepoint-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl 2021-05-17T16:32:09.0141855Z libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl 2021-05-17T16:32:09.0144623Z libclone-perl libcommon-sense-perl libconst-fast-perl 2021-05-17T16:32:09.0164688Z libcontextual-return-perl libcpanel-json-xs-perl libcroco3 2021-05-17T16:32:09.0167272Z libdata-optlist-perl libdevel-callchecker-perl libdevel-size-perl 2021-05-17T16:32:09.0168885Z libdigest-bubblebabble-perl libdigest-hmac-perl libdistro-info-perl 2021-05-17T16:32:09.0170827Z libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl 2021-05-17T16:32:09.0172366Z libfile-chdir-perl libfile-find-rule-perl libfile-homedir-perl 2021-05-17T16:32:09.0173824Z libfile-which-perl libfont-ttf-perl libfuture-perl 2021-05-17T16:32:09.0175421Z libgetopt-long-descriptive-perl libgit-wrapper-perl libgitlab-api-v4-perl 2021-05-17T16:32:09.0177249Z libhash-fieldhash-perl libhttp-tiny-multipart-perl libimport-into-perl 2021-05-17T16:32:09.0178910Z libio-async-loop-epoll-perl libio-async-perl libio-prompter-perl 2021-05-17T16:32:09.0180821Z libio-pty-perl libio-string-perl libipc-run-perl libjson-maybexs-perl 2021-05-17T16:32:09.0182562Z libjson-perl libjson-xs-perl liblinux-epoll-perl liblist-compare-perl 2021-05-17T16:32:09.0184217Z liblist-moreutils-perl liblist-someutils-perl liblist-someutils-xs-perl 2021-05-17T16:32:09.0186219Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-05-17T16:32:09.0194121Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-05-17T16:32:09.0195382Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-05-17T16:32:09.0196848Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-05-17T16:32:09.0201534Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-05-17T16:32:09.0203543Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-05-17T16:32:09.0205150Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-05-17T16:32:09.0206417Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-05-17T16:32:09.0208028Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-05-17T16:32:09.0209410Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-05-17T16:32:09.0210745Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-05-17T16:32:09.0212369Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-05-17T16:32:09.0213885Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-05-17T16:32:09.0215588Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-05-17T16:32:09.0217054Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-05-17T16:32:09.0218639Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-05-17T16:32:09.0370121Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-05-17T16:32:09.0372359Z libtype-tiny-perl libtype-tiny-xs-perl libtypes-serialiser-perl 2021-05-17T16:32:09.0373923Z libunicode-utf8-perl libvariable-magic-perl libwant-perl libxml-writer-perl 2021-05-17T16:32:09.0375126Z libyaml-libyaml-perl licensecheck lintian patchutils python3-gpg 2021-05-17T16:32:09.0376289Z python3-magic python3-unidiff python3-xdg qpdf t1utils wdiff 2021-05-17T16:32:09.0906572Z 0 upgraded, 130 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:32:09.0907897Z Need to get 8648 kB of archives. 2021-05-17T16:32:09.0909071Z After this operation, 32.3 MB of additional disk space will be used. 2021-05-17T16:32:09.0910715Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dctrl-tools amd64 2.24-3 [61.5 kB] 2021-05-17T16:32:09.0946289Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-which-perl all 1.23-1 [13.8 kB] 2021-05-17T16:32:09.0957681Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-homedir-perl all 1.004-1 [37.3 kB] 2021-05-17T16:32:09.0968525Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-pty-perl amd64 1:1.12-1 [32.4 kB] 2021-05-17T16:32:09.0980057Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libipc-run-perl all 20180523.0-2 [89.7 kB] 2021-05-17T16:32:09.1001696Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-method-modifiers-perl all 2.13-1 [16.2 kB] 2021-05-17T16:32:09.1011441Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-op-check-perl amd64 0.22-1build2 [10.2 kB] 2021-05-17T16:32:09.1019632Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdynaloader-functions-perl all 0.003-1 [11.9 kB] 2021-05-17T16:32:09.1029000Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-callchecker-perl amd64 0.008-1ubuntu1 [14.5 kB] 2021-05-17T16:32:09.1064231Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-classify-perl amd64 0.015-1build2 [21.1 kB] 2021-05-17T16:32:09.1066144Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-runtime-perl all 0.016-1 [16.2 kB] 2021-05-17T16:32:09.1068169Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimport-into-perl all 1.002005-1 [11.0 kB] 2021-05-17T16:32:09.1070175Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librole-tiny-perl all 2.001004-1 [16.5 kB] 2021-05-17T16:32:09.1072428Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstrictures-perl all 2.000006-1 [16.3 kB] 2021-05-17T16:32:09.1075989Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-quote-perl all 2.006006-1 [19.5 kB] 2021-05-17T16:32:09.1081340Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoo-perl all 2.003006-1 [46.3 kB] 2021-05-17T16:32:09.1088020Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 patchutils amd64 0.3.4-2 [71.1 kB] 2021-05-17T16:32:09.1103734Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 wdiff amd64 1.2.2-2build1 [29.8 kB] 2021-05-17T16:32:09.1112358Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 devscripts amd64 2.20.2ubuntu2 [940 kB] 2021-05-17T16:32:09.1258073Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 diffstat amd64 1.63-1 [27.2 kB] 2021-05-17T16:32:09.1270373Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-gpg amd64 1.13.1-7ubuntu2 [165 kB] 2021-05-17T16:32:09.1324312Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dput all 1.0.3ubuntu1 [42.3 kB] 2021-05-17T16:32:09.1334636Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdebi-core all 0.9.5.7+nmu3 [116 kB] 2021-05-17T16:32:09.1357668Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB] 2021-05-17T16:32:09.1378705Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gettext amd64 0.19.8.1-10build1 [895 kB] 2021-05-17T16:32:09.1550712Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] 2021-05-17T16:32:09.1552353Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libapt-pkg-perl amd64 0.1.36build3 [68.5 kB] 2021-05-17T16:32:09.1564797Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-zip-perl all 1.67-2 [90.5 kB] 2021-05-17T16:32:09.1576364Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarray-intspan-perl all 2.003-1 [23.3 kB] 2021-05-17T16:32:09.1584811Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasync-mergepoint-perl all 0.04-2 [10.2 kB] 2021-05-17T16:32:09.1594496Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-implementation-perl all 0.09-1 [12.2 kB] 2021-05-17T16:32:09.1606348Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [6784 B] 2021-05-17T16:32:09.1611060Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvariable-magic-perl amd64 0.62-1build2 [34.4 kB] 2021-05-17T16:32:09.1623659Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-endofscope-perl all 0.24-1 [16.8 kB] 2021-05-17T16:32:09.1631299Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcapture-tiny-perl all 0.48-1 [20.4 kB] 2021-05-17T16:32:09.1640045Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-xsaccessor-perl amd64 1.19-3build3 [33.6 kB] 2021-05-17T16:32:09.1691909Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclone-perl amd64 0.43-2 [11.0 kB] 2021-05-17T16:32:09.1698151Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcommon-sense-perl amd64 3.74-2build6 [20.1 kB] 2021-05-17T16:32:09.1707985Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-util-perl amd64 1.07-3build5 [19.7 kB] 2021-05-17T16:32:09.1716261Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-install-perl all 0.928-1 [10.5 kB] 2021-05-17T16:32:09.1723582Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdata-optlist-perl all 0.110-1 [9956 B] 2021-05-17T16:32:09.1731719Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-perl all 0.987-1 [44.9 kB] 2021-05-17T16:32:09.1742619Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libconst-fast-perl all 0.014-1 [7958 B] 2021-05-17T16:32:09.1744353Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwant-perl amd64 0.29-1build4 [24.2 kB] 2021-05-17T16:32:09.1753808Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcontextual-return-perl all 0.004014-2 [53.1 kB] 2021-05-17T16:32:09.1763392Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcpanel-json-xs-perl amd64 4.19-1build1 [109 kB] 2021-05-17T16:32:09.1778762Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-bubblebabble-perl all 0.02-2 [7908 B] 2021-05-17T16:32:09.1785439Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.3 kB] 2021-05-17T16:32:09.1792294Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdistro-info-perl all 0.23ubuntu1 [4668 B] 2021-05-17T16:32:09.1798220Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-ip-perl all 1.26-2 [27.4 kB] 2021-05-17T16:32:09.1807052Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-perl all 1.22-1 [336 kB] 2021-05-17T16:32:09.1864957Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-domain-tld-perl all 1.75-1 [29.1 kB] 2021-05-17T16:32:09.1874082Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libemail-valid-perl all 1.202-1 [16.3 kB] 2021-05-17T16:32:09.1882524Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libexporter-tiny-perl all 1.002001-1 [35.5 kB] 2021-05-17T16:32:09.1890439Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-chdir-perl all 0.1008-1 [11.7 kB] 2021-05-17T16:32:09.1899993Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-compare-perl all 0.03-1 [7318 B] 2021-05-17T16:32:09.1903717Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-glob-perl all 0.10-1 [7554 B] 2021-05-17T16:32:09.1911854Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-find-rule-perl all 0.34-1 [28.3 kB] 2021-05-17T16:32:09.1921966Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-string-perl all 1.08-3 [11.1 kB] 2021-05-17T16:32:09.1927870Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfont-ttf-perl all 1.06-1 [313 kB] 2021-05-17T16:32:09.1998211Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfuture-perl all 0.43-1 [77.8 kB] 2021-05-17T16:32:09.2010346Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-validate-perl amd64 1.29-3 [52.7 kB] 2021-05-17T16:32:09.2022674Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgetopt-long-descriptive-perl all 0.104-1 [24.6 kB] 2021-05-17T16:32:09.2029889Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-versions-perl all 1.62-1 [9294 B] 2021-05-17T16:32:09.2037448Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgit-wrapper-perl all 0.048-1 [29.9 kB] 2021-05-17T16:32:09.2046905Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhttp-tiny-multipart-perl all 0.08-1 [8488 B] 2021-05-17T16:32:09.2053671Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-prompter-perl all 0.004015-1 [58.1 kB] 2021-05-17T16:32:09.2062383Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-perl all 4.02000-2 [80.9 kB] 2021-05-17T16:32:09.2108442Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-perl all 1.708-1 [67.8 kB] 2021-05-17T16:32:09.2110786Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-adapter-screen-perl all 0.140-1 [12.1 kB] 2021-05-17T16:32:09.2112657Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-perl all 0.38-1 [19.1 kB] 2021-05-17T16:32:09.2114403Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-identify-perl amd64 0.14-1build2 [10.7 kB] 2021-05-17T16:32:09.2120279Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-name-perl amd64 0.26-1 [11.5 kB] 2021-05-17T16:32:09.2122122Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnamespace-clean-perl all 0.27-1 [13.6 kB] 2021-05-17T16:32:09.2124376Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-tiny-perl all 0.108-1 [42.6 kB] 2021-05-17T16:32:09.2128540Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-perl all 1.008001-2 [304 kB] 2021-05-17T16:32:09.2166789Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgitlab-api-v4-perl all 0.25-1 [83.8 kB] 2021-05-17T16:32:09.2179917Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhash-fieldhash-perl amd64 0.15-1build2 [16.9 kB] 2021-05-17T16:32:09.2186325Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstruct-dumb-perl all 0.09-1 [10.5 kB] 2021-05-17T16:32:09.2192420Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-perl all 0.75-1 [254 kB] 2021-05-17T16:32:09.2253807Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.0 kB] 2021-05-17T16:32:09.2267637Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-loop-epoll-perl all 0.20-1 [10.4 kB] 2021-05-17T16:32:09.2279305Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtypes-serialiser-perl all 1.0-1 [12.1 kB] 2021-05-17T16:32:09.2290953Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-xs-perl amd64 4.020-1build1 [83.7 kB] 2021-05-17T16:32:09.2312062Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-maybexs-perl all 1.004000-1 [11.0 kB] 2021-05-17T16:32:09.2324737Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-compare-perl all 0.53-1 [65.6 kB] 2021-05-17T16:32:09.2339888Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-moreutils-perl amd64 0.416-1build5 [55.5 kB] 2021-05-17T16:32:09.2352825Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-perl all 0.58-1 [29.7 kB] 2021-05-17T16:32:09.2366321Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-xs-perl amd64 0.58-2 [32.5 kB] 2021-05-17T16:32:09.2374128Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-aliases-perl all 0.001006-1 [7176 B] 2021-05-17T16:32:09.2382566Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libobject-id-perl all 0.1.2-2ubuntu1 [15.9 kB] 2021-05-17T16:32:09.2390547Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-struct-perl all 0.017-1 [23.4 kB] 2021-05-17T16:32:09.2401389Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-sec-perl amd64 1.15-1 [44.6 kB] 2021-05-17T16:32:09.2413970Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-libidn-perl amd64 0.12.ds-3build2 [17.3 kB] 2021-05-17T16:32:09.2425004Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-range-perl all 0.12-1 [8556 B] 2021-05-17T16:32:09.2431950Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-xs-perl amd64 0.29-1build1 [18.4 kB] 2021-05-17T16:32:09.2440918Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-iterator-rule-perl all 1.014-1 [49.5 kB] 2021-05-17T16:32:09.2455380Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperl4-corelibs-perl all 0.004-2 [37.4 kB] 2021-05-17T16:32:09.2464266Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperlio-gzip-perl amd64 0.19-1build5 [14.6 kB] 2021-05-17T16:32:09.2467311Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpod-constants-perl all 0.19-1 [16.0 kB] 2021-05-17T16:32:09.2472648Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqpdf26 amd64 9.1.1-1build1 [421 kB] 2021-05-17T16:32:09.2532132Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libre-engine-re2-perl amd64 0.13-5 [16.2 kB] 2021-05-17T16:32:09.2561504Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libreadonly-perl all 2.050-2 [19.9 kB] 2021-05-17T16:32:09.2572533Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-perl all 0.204-1 [15.0 kB] 2021-05-17T16:32:09.2585127Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-xs-perl amd64 0.117-1build2 [12.0 kB] 2021-05-17T16:32:09.2600331Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-license-perl all 3.2.0-1 [36.2 kB] 2021-05-17T16:32:09.2614025Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-perl all 0.2.12-1 [17.1 kB] 2021-05-17T16:32:09.2623415Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-decoder-perl amd64 4.011+ds-1build1 [102 kB] 2021-05-17T16:32:09.2637697Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-encoder-perl amd64 4.011+ds-1build1 [104 kB] 2021-05-17T16:32:09.2652486Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-perl all 4.011-1 [8604 B] 2021-05-17T16:32:09.2662186Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-key-perl amd64 1.33-2build2 [35.4 kB] 2021-05-17T16:32:09.2676191Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-copyright-perl all 0.003006-1 [9608 B] 2021-05-17T16:32:09.2681650Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-escape-perl all 2010.002-2 [17.6 kB] 2021-05-17T16:32:09.2689481Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-shellquote-perl all 1.04-1 [12.0 kB] 2021-05-17T16:32:09.2699068Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libterm-readkey-perl amd64 2.38-1build1 [24.6 kB] 2021-05-17T16:32:09.2726039Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-fatal-perl all 0.014-1 [11.1 kB] 2021-05-17T16:32:09.2728120Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-refcount-perl all 0.10-1 [11.4 kB] 2021-05-17T16:32:09.2729798Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-levenshtein-perl all 0.13-1 [9612 B] 2021-05-17T16:32:09.2754902Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-xs-perl amd64 0.016-1 [22.9 kB] 2021-05-17T16:32:09.2756951Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libunicode-utf8-perl amd64 0.62-1build1 [18.1 kB] 2021-05-17T16:32:09.2758606Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxml-writer-perl all 0.625-1 [24.9 kB] 2021-05-17T16:32:09.2760201Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [28.5 kB] 2021-05-17T16:32:09.2768845Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 licensecheck all 3.0.45-1 [23.9 kB] 2021-05-17T16:32:09.2776573Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-size-perl amd64 0.83-1build1 [20.0 kB] 2021-05-17T16:32:09.2786715Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 t1utils amd64 1.41-3 [56.1 kB] 2021-05-17T16:32:09.2797940Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 lintian all 2.62.0 [980 kB] 2021-05-17T16:32:09.2896724Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-unidiff all 0.5.5-2 [9180 B] 2021-05-17T16:32:09.2906306Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-xdg all 0.26-1ubuntu1 [36.1 kB] 2021-05-17T16:32:09.2917449Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qpdf amd64 9.1.1-1build1 [476 kB] 2021-05-17T16:32:09.2980879Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-magic all 2:0.4.15-3 [9376 B] 2021-05-17T16:32:10.0157664Z Fetched 8648 kB in 0s (31.2 MB/s) 2021-05-17T16:32:10.0494437Z Selecting previously unselected package dctrl-tools. 2021-05-17T16:32:10.0684124Z (Reading database ... 2021-05-17T16:32:10.0684941Z (Reading database ... 5% 2021-05-17T16:32:10.0685463Z (Reading database ... 10% 2021-05-17T16:32:10.0685986Z (Reading database ... 15% 2021-05-17T16:32:10.0686488Z (Reading database ... 20% 2021-05-17T16:32:10.0686980Z (Reading database ... 25% 2021-05-17T16:32:10.0687487Z (Reading database ... 30% 2021-05-17T16:32:10.0688173Z (Reading database ... 35% 2021-05-17T16:32:10.0688711Z (Reading database ... 40% 2021-05-17T16:32:10.0689424Z (Reading database ... 45% 2021-05-17T16:32:10.0689936Z (Reading database ... 50% 2021-05-17T16:32:10.0997591Z (Reading database ... 55% 2021-05-17T16:32:10.1522789Z (Reading database ... 60% 2021-05-17T16:32:10.1890585Z (Reading database ... 65% 2021-05-17T16:32:10.2320519Z (Reading database ... 70% 2021-05-17T16:32:10.3003367Z (Reading database ... 75% 2021-05-17T16:32:10.3821517Z (Reading database ... 80% 2021-05-17T16:32:10.4611350Z (Reading database ... 85% 2021-05-17T16:32:10.5199941Z (Reading database ... 90% 2021-05-17T16:32:10.5735658Z (Reading database ... 95% 2021-05-17T16:32:10.5736393Z (Reading database ... 100% 2021-05-17T16:32:10.5737155Z (Reading database ... 254809 files and directories currently installed.) 2021-05-17T16:32:10.5876134Z Preparing to unpack .../000-dctrl-tools_2.24-3_amd64.deb ... 2021-05-17T16:32:10.6116815Z Unpacking dctrl-tools (2.24-3) ... 2021-05-17T16:32:10.6400941Z Selecting previously unselected package libfile-which-perl. 2021-05-17T16:32:10.6666434Z Preparing to unpack .../001-libfile-which-perl_1.23-1_all.deb ... 2021-05-17T16:32:10.6676751Z Unpacking libfile-which-perl (1.23-1) ... 2021-05-17T16:32:10.6963470Z Selecting previously unselected package libfile-homedir-perl. 2021-05-17T16:32:10.7142594Z Preparing to unpack .../002-libfile-homedir-perl_1.004-1_all.deb 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... 2021-05-17T16:32:11.8573795Z Unpacking dput (1.0.3ubuntu1) ... 2021-05-17T16:32:11.8922823Z Selecting previously unselected package gdebi-core. 2021-05-17T16:32:11.9141010Z Preparing to unpack .../022-gdebi-core_0.9.5.7+nmu3_all.deb ... 2021-05-17T16:32:11.9152951Z Unpacking gdebi-core (0.9.5.7+nmu3) ... 2021-05-17T16:32:12.3483660Z Selecting previously unselected package libcroco3:amd64. 2021-05-17T16:32:12.3734145Z Preparing to unpack .../023-libcroco3_0.6.13-1_amd64.deb ... 2021-05-17T16:32:12.3767825Z Unpacking libcroco3:amd64 (0.6.13-1) ... 2021-05-17T16:32:12.4122784Z Selecting previously unselected package gettext. 2021-05-17T16:32:12.4357072Z Preparing to unpack .../024-gettext_0.19.8.1-10build1_amd64.deb ... 2021-05-17T16:32:12.4368598Z Unpacking gettext (0.19.8.1-10build1) ... 2021-05-17T16:32:12.5683904Z Selecting previously unselected package intltool-debian. 2021-05-17T16:32:12.5891564Z Preparing to unpack .../025-intltool-debian_0.35.0+20060710.5_all.deb ... 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Done 2021-05-17T16:32:44.2117632Z [command]/usr/bin/sudo ln -s /opt/R/devel/bin/R /usr/local/bin/R 2021-05-17T16:32:44.2238139Z [command]/usr/bin/sudo ln -s /opt/R/devel/bin/Rscript /usr/local/bin/Rscript 2021-05-17T16:32:44.2506137Z ##[group]Run r-lib/actions/setup-tinytex@master 2021-05-17T16:32:44.2506630Z env: 2021-05-17T16:32:44.2506991Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:32:44.2507395Z TIC_DEPLOY_KEY: 2021-05-17T16:32:44.2508255Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:32:44.2509771Z GITHUB_PAT: *** 2021-05-17T16:32:44.2510483Z COVERALLS_TOKEN: *** 2021-05-17T16:32:44.2510914Z continue-on-error: true 2021-05-17T16:32:44.2511314Z VDIFFR_RUN_TESTS: 2021-05-17T16:32:44.2511919Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:32:44.2512287Z TZ: UTC 2021-05-17T16:32:44.2512806Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:32:44.2513368Z NOT_CRAN: true 2021-05-17T16:32:44.2513693Z ##[endgroup] 2021-05-17T16:32:44.3080040Z [command]sudo apt-get install -y texinfo 2021-05-17T16:32:44.4818673Z Reading package lists... 2021-05-17T16:32:44.6256294Z Building dependency tree... 2021-05-17T16:32:44.6274011Z Reading state information... 2021-05-17T16:32:44.8341215Z texinfo is already the newest version (6.7.0.dfsg.2-5). 2021-05-17T16:32:44.8342955Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:32:45.2179268Z [command]sh /home/runner/work/_temp/install-unx.sh 2021-05-17T16:32:45.2337354Z --2021-05-17 16:32:45-- https://yihui.org/tinytex/TinyTeX-1.tar.gz 2021-05-17T16:32:45.2436571Z Resolving yihui.org (yihui.org)... 76.223.126.88 2021-05-17T16:32:45.2569672Z Connecting to yihui.org (yihui.org)|76.223.126.88|:443... connected. 2021-05-17T16:32:45.3754333Z HTTP request sent, awaiting response... 301 Moved Permanently 2021-05-17T16:32:45.3756327Z Location: https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu [following] 2021-05-17T16:32:45.3758226Z --2021-05-17 16:32:45-- https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu 2021-05-17T16:32:45.4685865Z Resolving ci.appveyor.com (ci.appveyor.com)... 138.91.141.243 2021-05-17T16:32:45.4909616Z Connecting to ci.appveyor.com (ci.appveyor.com)|138.91.141.243|:443... connected. 2021-05-17T16:32:45.5807668Z HTTP request sent, awaiting response... 302 Found 2021-05-17T16:32:45.5811305Z Location: https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1550/guvetqs88lxl2mv0/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=xFXhTFoPEVPl0B0JCFMNz0P9YV6%2BxNt%2B6zZRY4JliJM%3D&st=2021-05-17T16%3A31%3A45Z&se=2021-05-17T16%3A37%3A45Z&sp=r [following] 2021-05-17T16:32:45.5815965Z --2021-05-17 16:32:45-- https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1550/guvetqs88lxl2mv0/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=xFXhTFoPEVPl0B0JCFMNz0P9YV6%2BxNt%2B6zZRY4JliJM%3D&st=2021-05-17T16%3A31%3A45Z&se=2021-05-17T16%3A37%3A45Z&sp=r 2021-05-17T16:32:45.6859661Z Resolving appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)... 52.239.228.196 2021-05-17T16:32:45.7082776Z Connecting to appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)|52.239.228.196|:443... connected. 2021-05-17T16:32:45.9097638Z HTTP request sent, awaiting response... 200 OK 2021-05-17T16:32:45.9099128Z Length: 67306919 (64M) [application/octet-stream] 2021-05-17T16:32:45.9101381Z Saving to: ‘TinyTeX.tar.gz’ 2021-05-17T16:32:46.1341699Z 2021-05-17T16:32:46.8977759Z 0K ........ ........ ........ ........ 49% 34.2M 1s 2021-05-17T16:32:47.6683160Z 32768K ........ ........ ........ ........ 99% 40.1M 0s 2021-05-17T16:32:47.6684224Z 65536K 100% 7.84M=1.8s 2021-05-17T16:32:47.6684496Z 2021-05-17T16:32:47.6688363Z 2021-05-17 16:32:47 (36.5 MB/s) - ‘TinyTeX.tar.gz’ saved [67306919/67306919] 2021-05-17T16:32:47.6689297Z 2021-05-17T16:32:49.4449883Z tlmgr: setting option sys_bin to /home/runner/bin. 2021-05-17T16:32:49.4451025Z tlmgr: updating /home/runner/.TinyTeX/tlpkg/texlive.tlpdb 2021-05-17T16:32:49.7377773Z ##[group]Run tlmgr update --self 2021-05-17T16:32:49.7378380Z tlmgr update --self 2021-05-17T16:32:49.7379165Z tlmgr install filecontents upquote courier courier-scaled biber biblatex collection-luatex ae thumbpdf grfext 2021-05-17T16:32:49.7379945Z tlmgr update --all 2021-05-17T16:32:49.7426525Z shell: /usr/bin/bash -e {0} 2021-05-17T16:32:49.7426871Z env: 2021-05-17T16:32:49.7427267Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:32:49.7427872Z TIC_DEPLOY_KEY: 2021-05-17T16:32:49.7428609Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:32:49.7430211Z GITHUB_PAT: *** 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2021-05-17T16:32:58.2158332Z [44/89, 00:05/00:05] install: luaindex [5k] 2021-05-17T16:32:58.2825987Z [45/89, 00:05/00:05] install: luainputenc [5k] 2021-05-17T16:32:58.3483364Z [46/89, 00:05/00:05] install: luaintro [1k] 2021-05-17T16:32:58.4190748Z [47/89, 00:05/00:05] install: luakeys [5k] 2021-05-17T16:32:58.4850808Z [48/89, 00:05/00:05] install: lualatex-doc [1k] 2021-05-17T16:32:58.5562052Z [49/89, 00:05/00:05] install: lualatex-truncate [2k] 2021-05-17T16:32:58.6231318Z [50/89, 00:05/00:05] install: luamplib [12k] 2021-05-17T16:32:58.6924320Z [51/89, 00:05/00:05] install: luapackageloader [2k] 2021-05-17T16:32:58.7584501Z [52/89, 00:05/00:05] install: luaprogtable [7k] 2021-05-17T16:32:58.8252180Z [53/89, 00:05/00:05] install: luarandom [2k] 2021-05-17T16:32:58.8928347Z [54/89, 00:05/00:05] install: luatex85 [2k] 2021-05-17T16:32:58.9600991Z [55/89, 00:05/00:05] install: luatexbase [4k] 2021-05-17T16:32:59.0273965Z [56/89, 00:05/00:05] install: luatexko [22k] 2021-05-17T16:32:59.0962576Z [57/89, 00:06/00:06] install: luatextra [2k] 2021-05-17T16:32:59.1628849Z [58/89, 00:06/00:06] install: luavlna [8k] 2021-05-17T16:32:59.2324856Z [59/89, 00:06/00:06] install: luaxml [31k] 2021-05-17T16:32:59.3030500Z [60/89, 00:06/00:06] install: makeindex.x86_64-linux [49k] 2021-05-17T16:32:59.3733403Z [61/89, 00:06/00:06] install: makeindex [5k] 2021-05-17T16:32:59.4429783Z [62/89, 00:06/00:06] install: mflogo [2k] 2021-05-17T16:32:59.5109464Z [63/89, 00:06/00:06] install: newpax [9k] 2021-05-17T16:32:59.5826116Z [64/89, 00:06/00:06] install: nodetree [13k] 2021-05-17T16:32:59.6522756Z [65/89, 00:06/00:06] install: odsfile [5k] 2021-05-17T16:32:59.7229731Z [66/89, 00:06/00:06] install: optex.x86_64-linux [1k] 2021-05-17T16:32:59.8012008Z [67/89, 00:06/00:06] install: optex [770k] 2021-05-17T16:32:59.9062956Z [68/89, 00:06/00:06] install: pdfarticle [4k] 2021-05-17T16:32:59.9765934Z [69/89, 00:06/00:06] install: pdfextra [22k] 2021-05-17T16:33:00.0529686Z [70/89, 00:06/00:06] install: placeat [4k] 2021-05-17T16:33:00.1269091Z [71/89, 00:07/00:07] install: plantuml [3k] 2021-05-17T16:33:00.1962257Z [72/89, 00:07/00:07] install: rsfs [55k] 2021-05-17T16:33:00.2693447Z [73/89, 00:07/00:07] install: selnolig [53k] 2021-05-17T16:33:00.3431794Z [74/89, 00:07/00:07] install: spelling [14k] 2021-05-17T16:33:00.4124199Z [75/89, 00:07/00:07] install: stricttex [2k] 2021-05-17T16:33:00.4865619Z [76/89, 00:07/00:07] install: texlive-common [1k] 2021-05-17T16:33:00.5543120Z [77/89, 00:07/00:07] install: texlive-en [1k] 2021-05-17T16:33:00.6239597Z [78/89, 00:07/00:07] install: texlive-msg-translations [144k] 2021-05-17T16:33:00.7065465Z [79/89, 00:07/00:07] install: thumbpdf.x86_64-linux [1k] 2021-05-17T16:33:00.7755205Z [80/89, 00:07/00:07] install: thumbpdf [19k] 2021-05-17T16:33:00.8454962Z [81/89, 00:07/00:07] install: tlshell.x86_64-linux [1k] 2021-05-17T16:33:00.9124479Z [82/89, 00:07/00:07] install: tlshell [29k] 2021-05-17T16:33:00.9837572Z [83/89, 00:07/00:07] install: typewriter [25k] 2021-05-17T16:33:01.0569349Z [84/89, 00:07/00:07] install: uninormalize [6k] 2021-05-17T16:33:01.1265100Z [85/89, 00:08/00:08] install: upquote [2k] 2021-05-17T16:33:01.2002176Z [86/89, 00:08/00:08] install: xdvi.x86_64-linux [530k] 2021-05-17T16:33:01.3155905Z [87/89, 00:08/00:08] install: xdvi [7k] 2021-05-17T16:33:01.3844197Z [88/89, 00:08/00:08] install: collection-basic [1k] 2021-05-17T16:33:01.4549072Z [89/89, 00:08/00:08] install: collection-luatex [1k] 2021-05-17T16:33:01.4726444Z running mktexlsr ... 2021-05-17T16:33:01.5542021Z done running mktexlsr. 2021-05-17T16:33:01.5815706Z running updmap-sys ... 2021-05-17T16:33:01.8331535Z done running updmap-sys. 2021-05-17T16:33:01.8332985Z regenerating fmtutil.cnf in /home/runner/.TinyTeX/texmf-dist 2021-05-17T16:33:01.8335078Z running fmtutil-sys --byfmt optex --no-error-if-no-engine=luajithbtex,luajittex,mfluajit --status-file=/tmp/ZSwGe7pFuB/iCU2RGL5u3 ... 2021-05-17T16:33:02.1869227Z done running fmtutil-sys --byfmt optex --no-error-if-no-engine=luajithbtex,luajittex,mfluajit --status-file=/tmp/ZSwGe7pFuB/iCU2RGL5u3. 2021-05-17T16:33:02.1871269Z OK: optex.fmt/luatex 2021-05-17T16:33:02.1872610Z tlmgr: package log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr.log 2021-05-17T16:33:02.1874966Z tlmgr: command log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr-commands.log 2021-05-17T16:33:03.6537995Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-05-17T16:33:03.6539375Z tlmgr: no updates available 2021-05-17T16:33:03.7477480Z ##[group]Run r-lib/actions/setup-pandoc@master 2021-05-17T16:33:03.7478047Z with: 2021-05-17T16:33:03.7478623Z pandoc-version: 2.7.3 2021-05-17T16:33:03.7479101Z env: 2021-05-17T16:33:03.7479689Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:33:03.7480542Z TIC_DEPLOY_KEY: 2021-05-17T16:33:03.7481344Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:33:03.7483747Z GITHUB_PAT: *** 2021-05-17T16:33:03.7484638Z COVERALLS_TOKEN: *** 2021-05-17T16:33:03.7485314Z continue-on-error: true 2021-05-17T16:33:03.7485744Z VDIFFR_RUN_TESTS: 2021-05-17T16:33:03.7486225Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:33:03.7486631Z TZ: UTC 2021-05-17T16:33:03.7487079Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:33:03.7487686Z NOT_CRAN: true 2021-05-17T16:33:03.7488396Z ##[endgroup] 2021-05-17T16:33:04.1228464Z [command]sudo apt-get install -y gdebi-core 2021-05-17T16:33:04.1952990Z Reading package lists... 2021-05-17T16:33:04.3316791Z Building dependency tree... 2021-05-17T16:33:04.3335263Z Reading state information... 2021-05-17T16:33:04.5500345Z gdebi-core is already the newest version (0.9.5.7+nmu3). 2021-05-17T16:33:04.5501946Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:33:04.5539502Z [command]sudo gdebi --non-interactive /home/runner/work/_temp/pandoc-2.7.3-1-amd64.deb 2021-05-17T16:33:04.6700955Z 2021-05-17T16:33:04.6878883Z Reading package lists... 0% 2021-05-17T16:33:04.6880891Z 2021-05-17T16:33:04.6895302Z Reading package lists... 100% 2021-05-17T16:33:04.6895715Z 2021-05-17T16:33:04.6895964Z 2021-05-17T16:33:04.6896473Z Reading package lists... Done 2021-05-17T16:33:04.6896840Z 2021-05-17T16:33:04.6897335Z Building dependency tree... 0% 2021-05-17T16:33:04.6897703Z 2021-05-17T16:33:04.7099427Z Building dependency tree... 0% 2021-05-17T16:33:04.7099830Z 2021-05-17T16:33:04.7100511Z Building dependency tree... 50% 2021-05-17T16:33:04.7100799Z 2021-05-17T16:33:04.8102914Z Building dependency tree... 50% 2021-05-17T16:33:04.8103265Z 2021-05-17T16:33:04.8103694Z Building dependency tree 2021-05-17T16:33:04.8104007Z 2021-05-17T16:33:04.8104765Z Reading state information... 0% 2021-05-17T16:33:04.8105052Z 2021-05-17T16:33:04.9538396Z Reading state information... 0% 2021-05-17T16:33:04.9538913Z 2021-05-17T16:33:04.9539285Z 2021-05-17T16:33:04.9539708Z Reading state information... Done 2021-05-17T16:33:04.9540022Z 2021-05-17T16:33:04.9540437Z Reading state information... 0% 2021-05-17T16:33:04.9588387Z 2021-05-17T16:33:04.9588866Z Reading state information... 1% 2021-05-17T16:33:04.9627070Z 2021-05-17T16:33:04.9628064Z Reading state information... 3% 2021-05-17T16:33:04.9666012Z 2021-05-17T16:33:04.9666469Z Reading state information... 5% 2021-05-17T16:33:04.9705787Z 2021-05-17T16:33:04.9706271Z Reading state information... 7% 2021-05-17T16:33:04.9744613Z 2021-05-17T16:33:04.9745269Z Reading state information... 9% 2021-05-17T16:33:04.9780151Z 2021-05-17T16:33:04.9780629Z Reading state information... 11% 2021-05-17T16:33:04.9817579Z 2021-05-17T16:33:04.9818053Z Reading state information... 13% 2021-05-17T16:33:04.9855220Z 2021-05-17T16:33:04.9855690Z Reading state information... 15% 2021-05-17T16:33:04.9889608Z 2021-05-17T16:33:04.9890533Z Reading state information... 17% 2021-05-17T16:33:04.9930926Z 2021-05-17T16:33:04.9931560Z Reading state information... 19% 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2021-05-17T16:33:05.0893687Z 2021-05-17T16:33:05.0894147Z Reading state information... 65% 2021-05-17T16:33:05.0935235Z 2021-05-17T16:33:05.0935707Z Reading state information... 67% 2021-05-17T16:33:05.0982357Z 2021-05-17T16:33:05.0982910Z Reading state information... 69% 2021-05-17T16:33:05.1042759Z 2021-05-17T16:33:05.1043344Z Reading state information... 71% 2021-05-17T16:33:05.1080857Z 2021-05-17T16:33:05.1081378Z Reading state information... 73% 2021-05-17T16:33:05.1126326Z 2021-05-17T16:33:05.1126828Z Reading state information... 75% 2021-05-17T16:33:05.1184088Z 2021-05-17T16:33:05.1184604Z Reading state information... 77% 2021-05-17T16:33:05.1229471Z 2021-05-17T16:33:05.1230181Z Reading state information... 79% 2021-05-17T16:33:05.1274993Z 2021-05-17T16:33:05.1275479Z Reading state information... 81% 2021-05-17T16:33:05.1320298Z 2021-05-17T16:33:05.1320972Z Reading state information... 83% 2021-05-17T16:33:05.1365280Z 2021-05-17T16:33:05.1365844Z Reading state information... 85% 2021-05-17T16:33:05.1410302Z 2021-05-17T16:33:05.1410830Z Reading state information... 87% 2021-05-17T16:33:05.1453858Z 2021-05-17T16:33:05.1454359Z Reading state information... 89% 2021-05-17T16:33:05.1492416Z 2021-05-17T16:33:05.1492934Z Reading state information... 91% 2021-05-17T16:33:05.1531482Z 2021-05-17T16:33:05.1532218Z Reading state information... 93% 2021-05-17T16:33:05.1573696Z 2021-05-17T16:33:05.1574591Z Reading state information... 95% 2021-05-17T16:33:05.1616955Z 2021-05-17T16:33:05.1618382Z Reading state information... 97% 2021-05-17T16:33:05.1662536Z 2021-05-17T16:33:05.1663427Z Reading state information... 99% 2021-05-17T16:33:05.4441057Z Selecting previously unselected package pandoc. 2021-05-17T16:33:05.5487135Z (Reading database ... 261973 files and directories currently installed.) 2021-05-17T16:33:05.5596288Z Preparing to unpack .../_temp/pandoc-2.7.3-1-amd64.deb ... 2021-05-17T16:33:05.5610326Z Unpacking pandoc (2.7.3-1) ... 2021-05-17T16:33:07.5481416Z Setting up pandoc (2.7.3-1) ... 2021-05-17T16:33:07.5520474Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:33:08.2762865Z 2021-05-17T16:33:08.2763379Z 2021-05-17T16:33:08.2764086Z Reading state information... Done 2021-05-17T16:33:08.3049466Z ##[group]Run git config user.name adigherman 2021-05-17T16:33:08.3050440Z git config user.name adigherman 2021-05-17T16:33:08.3050969Z git config user.email adig@jhu.edu 2021-05-17T16:33:08.3096226Z shell: /usr/bin/bash -e {0} 2021-05-17T16:33:08.3096642Z env: 2021-05-17T16:33:08.3097273Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:33:08.3097784Z TIC_DEPLOY_KEY: 2021-05-17T16:33:08.3098785Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:33:08.3100695Z GITHUB_PAT: *** 2021-05-17T16:33:08.3102387Z COVERALLS_TOKEN: *** 2021-05-17T16:33:08.3102951Z continue-on-error: true 2021-05-17T16:33:08.3103395Z VDIFFR_RUN_TESTS: 2021-05-17T16:33:08.3104097Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:33:08.3104777Z TZ: UTC 2021-05-17T16:33:08.3105322Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:33:08.3106215Z NOT_CRAN: true 2021-05-17T16:33:08.3106612Z ##[endgroup] 2021-05-17T16:33:08.3379443Z ##[group]Run adigherman/actions/install-sysdeps-linux@master 2021-05-17T16:33:08.3380214Z env: 2021-05-17T16:33:08.3380623Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:33:08.3381205Z TIC_DEPLOY_KEY: 2021-05-17T16:33:08.3381881Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:33:08.3383322Z GITHUB_PAT: *** 2021-05-17T16:33:08.3384030Z COVERALLS_TOKEN: *** 2021-05-17T16:33:08.3384460Z continue-on-error: true 2021-05-17T16:33:08.3384860Z VDIFFR_RUN_TESTS: 2021-05-17T16:33:08.3385464Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:33:08.3385864Z TZ: UTC 2021-05-17T16:33:08.3386214Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:33:08.3386591Z NOT_CRAN: true 2021-05-17T16:33:08.3386919Z ##[endgroup] 2021-05-17T16:33:08.5322852Z Reading package lists... 2021-05-17T16:33:08.6755990Z Building dependency tree... 2021-05-17T16:33:08.6775058Z Reading state information... 2021-05-17T16:33:08.7993156Z The following additional packages will be installed: 2021-05-17T16:33:08.7998322Z cmake-data libjsoncpp1 librhash0 2021-05-17T16:33:08.8004330Z Suggested packages: 2021-05-17T16:33:08.8005083Z cmake-doc ninja-build 2021-05-17T16:33:08.8419634Z The following NEW packages will be installed: 2021-05-17T16:33:08.8425714Z cmake cmake-data libjsoncpp1 librhash0 2021-05-17T16:33:08.8621519Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:33:08.8622309Z Need to get 5470 kB of archives. 2021-05-17T16:33:08.8623870Z After this operation, 28.3 MB of additional disk space will be used. 2021-05-17T16:33:08.8625940Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake-data all 3.16.3-1ubuntu1 [1612 kB] 2021-05-17T16:33:08.8885054Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjsoncpp1 amd64 1.7.4-3.1ubuntu2 [75.6 kB] 2021-05-17T16:33:08.8906012Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librhash0 amd64 1.3.9-1 [113 kB] 2021-05-17T16:33:08.8923765Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake amd64 3.16.3-1ubuntu1 [3669 kB] 2021-05-17T16:33:09.3432689Z Fetched 5470 kB in 0s (51.1 MB/s) 2021-05-17T16:33:09.3836391Z Selecting previously unselected package cmake-data. 2021-05-17T16:33:09.3904333Z (Reading database ... 2021-05-17T16:33:09.3905488Z (Reading database ... 5% 2021-05-17T16:33:09.3906166Z (Reading database ... 10% 2021-05-17T16:33:09.3906821Z (Reading database ... 15% 2021-05-17T16:33:09.3907474Z (Reading database ... 20% 2021-05-17T16:33:09.3908275Z (Reading database ... 25% 2021-05-17T16:33:09.3909047Z (Reading database ... 30% 2021-05-17T16:33:09.3909875Z (Reading database ... 35% 2021-05-17T16:33:09.3910507Z (Reading database ... 40% 2021-05-17T16:33:09.3911138Z (Reading database ... 45% 2021-05-17T16:33:09.3911749Z (Reading database ... 50% 2021-05-17T16:33:09.3936608Z (Reading database ... 55% 2021-05-17T16:33:09.3971149Z (Reading database ... 60% 2021-05-17T16:33:09.4016183Z (Reading database ... 65% 2021-05-17T16:33:09.4134587Z (Reading database ... 70% 2021-05-17T16:33:09.4240899Z (Reading database ... 75% 2021-05-17T16:33:09.4507342Z (Reading database ... 80% 2021-05-17T16:33:09.4783784Z (Reading database ... 85% 2021-05-17T16:33:09.4909824Z (Reading database ... 90% 2021-05-17T16:33:09.4977839Z (Reading database ... 95% 2021-05-17T16:33:09.4978319Z (Reading database ... 100% 2021-05-17T16:33:09.4979143Z (Reading database ... 261980 files and directories currently installed.) 2021-05-17T16:33:09.5094283Z Preparing to unpack .../cmake-data_3.16.3-1ubuntu1_all.deb ... 2021-05-17T16:33:09.5353171Z Unpacking cmake-data (3.16.3-1ubuntu1) ... 2021-05-17T16:33:10.0356174Z Selecting previously unselected package libjsoncpp1:amd64. 2021-05-17T16:33:10.0663525Z Preparing to unpack .../libjsoncpp1_1.7.4-3.1ubuntu2_amd64.deb ... 2021-05-17T16:33:10.0689580Z Unpacking libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-05-17T16:33:10.1037909Z Selecting previously unselected package librhash0:amd64. 2021-05-17T16:33:10.1312676Z Preparing to unpack .../librhash0_1.3.9-1_amd64.deb ... 2021-05-17T16:33:10.1324443Z Unpacking librhash0:amd64 (1.3.9-1) ... 2021-05-17T16:33:10.1629850Z Selecting previously unselected package cmake. 2021-05-17T16:33:10.1894127Z Preparing to unpack .../cmake_3.16.3-1ubuntu1_amd64.deb ... 2021-05-17T16:33:10.1906809Z Unpacking cmake (3.16.3-1ubuntu1) ... 2021-05-17T16:33:10.6105682Z Setting up librhash0:amd64 (1.3.9-1) ... 2021-05-17T16:33:10.6144848Z Setting up cmake-data (3.16.3-1ubuntu1) ... 2021-05-17T16:33:10.6551224Z Setting up libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-05-17T16:33:10.6587940Z Setting up cmake (3.16.3-1ubuntu1) ... 2021-05-17T16:33:10.6629414Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:33:11.7051951Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:33:13.6748801Z Reading package lists... 2021-05-17T16:33:13.8103278Z Building dependency tree... 2021-05-17T16:33:13.8122221Z Reading state information... 2021-05-17T16:33:13.9480005Z Suggested packages: 2021-05-17T16:33:13.9481611Z libssh-doc 2021-05-17T16:33:13.9906910Z The following NEW packages will be installed: 2021-05-17T16:33:13.9911111Z libssh-dev 2021-05-17T16:33:14.0100004Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:33:14.0100859Z Need to get 219 kB of archives. 2021-05-17T16:33:14.0101819Z After this operation, 1127 kB of additional disk space will be used. 2021-05-17T16:33:14.0103379Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-dev amd64 0.9.3-2ubuntu2.1 [219 kB] 2021-05-17T16:33:14.4037826Z Fetched 219 kB in 0s (11.5 MB/s) 2021-05-17T16:33:14.4323763Z Selecting previously unselected package libssh-dev:amd64. 2021-05-17T16:33:14.4379553Z (Reading database ... 2021-05-17T16:33:14.4382801Z (Reading database ... 5% 2021-05-17T16:33:14.4383652Z (Reading database ... 10% 2021-05-17T16:33:14.4384071Z (Reading database ... 15% 2021-05-17T16:33:14.4384497Z (Reading database ... 20% 2021-05-17T16:33:14.4384925Z (Reading database ... 25% 2021-05-17T16:33:14.4385351Z (Reading database ... 30% 2021-05-17T16:33:14.4385781Z (Reading database ... 35% 2021-05-17T16:33:14.4386190Z (Reading database ... 40% 2021-05-17T16:33:14.4386616Z (Reading database ... 45% 2021-05-17T16:33:14.4387203Z (Reading database ... 50% 2021-05-17T16:33:14.4419477Z (Reading database ... 55% 2021-05-17T16:33:14.4451862Z (Reading database ... 60% 2021-05-17T16:33:14.4484862Z (Reading database ... 65% 2021-05-17T16:33:14.4594247Z (Reading database ... 70% 2021-05-17T16:33:14.4694323Z (Reading database ... 75% 2021-05-17T16:33:14.4938504Z (Reading database ... 80% 2021-05-17T16:33:14.5239928Z (Reading database ... 85% 2021-05-17T16:33:14.5398924Z (Reading database ... 90% 2021-05-17T16:33:14.5482344Z (Reading database ... 95% 2021-05-17T16:33:14.5482873Z (Reading database ... 100% 2021-05-17T16:33:14.5483763Z (Reading database ... 264764 files and directories currently installed.) 2021-05-17T16:33:14.5629414Z Preparing to unpack .../libssh-dev_0.9.3-2ubuntu2.1_amd64.deb ... 2021-05-17T16:33:14.5643099Z Unpacking libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-05-17T16:33:14.6411591Z Setting up libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-05-17T16:33:16.6330541Z Reading package lists... 2021-05-17T16:33:16.7702938Z Building dependency tree... 2021-05-17T16:33:16.7720110Z Reading state information... 2021-05-17T16:33:16.9583759Z The following NEW packages will be installed: 2021-05-17T16:33:16.9586820Z jags 2021-05-17T16:33:16.9782574Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:33:16.9783391Z Need to get 1562 kB of archives. 2021-05-17T16:33:16.9784013Z After this operation, 3615 kB of additional disk space will be used. 2021-05-17T16:33:16.9785967Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 jags amd64 4.3.0-3build1 [1562 kB] 2021-05-17T16:33:17.3797257Z Fetched 1562 kB in 0s (40.4 MB/s) 2021-05-17T16:33:17.4123670Z Selecting previously unselected package jags. 2021-05-17T16:33:17.4166048Z (Reading database ... 2021-05-17T16:33:17.4167061Z (Reading database ... 5% 2021-05-17T16:33:17.4167528Z (Reading database ... 10% 2021-05-17T16:33:17.4168123Z (Reading database ... 15% 2021-05-17T16:33:17.4168737Z (Reading database ... 20% 2021-05-17T16:33:17.4169187Z (Reading database ... 25% 2021-05-17T16:33:17.4169620Z (Reading database ... 30% 2021-05-17T16:33:17.4170226Z (Reading database ... 35% 2021-05-17T16:33:17.4170646Z (Reading database ... 40% 2021-05-17T16:33:17.4171077Z (Reading database ... 45% 2021-05-17T16:33:17.4171845Z (Reading database ... 50% 2021-05-17T16:33:17.4206659Z (Reading database ... 55% 2021-05-17T16:33:17.4243543Z (Reading database ... 60% 2021-05-17T16:33:17.4278205Z (Reading database ... 65% 2021-05-17T16:33:17.4384471Z (Reading database ... 70% 2021-05-17T16:33:17.4484407Z (Reading database ... 75% 2021-05-17T16:33:17.4716356Z (Reading database ... 80% 2021-05-17T16:33:17.4970729Z (Reading database ... 85% 2021-05-17T16:33:17.5087081Z (Reading database ... 90% 2021-05-17T16:33:17.5160964Z (Reading database ... 95% 2021-05-17T16:33:17.5162639Z (Reading database ... 100% 2021-05-17T16:33:17.5163328Z (Reading database ... 264783 files and directories currently installed.) 2021-05-17T16:33:17.5284194Z Preparing to unpack .../jags_4.3.0-3build1_amd64.deb ... 2021-05-17T16:33:17.5303091Z Unpacking jags (4.3.0-3build1) ... 2021-05-17T16:33:18.1651272Z Setting up jags (4.3.0-3build1) ... 2021-05-17T16:33:18.1660103Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:33:18.3976912Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:33:20.4110289Z Reading package lists... 2021-05-17T16:33:20.5392132Z Building dependency tree... 2021-05-17T16:33:20.5412944Z Reading state information... 2021-05-17T16:33:20.6879793Z The following additional packages will be installed: 2021-05-17T16:33:20.6882026Z libnode64 libuv1-dev 2021-05-17T16:33:20.7343214Z The following NEW packages will be installed: 2021-05-17T16:33:20.7345566Z libnode-dev libnode64 libuv1-dev 2021-05-17T16:33:20.7522840Z 0 upgraded, 3 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:33:20.7523901Z Need to get 6239 kB of archives. 2021-05-17T16:33:20.7525667Z After this operation, 24.9 MB of additional disk space will be used. 2021-05-17T16:33:20.7527659Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libuv1-dev amd64 1.34.2-1ubuntu1.1 [103 kB] 2021-05-17T16:33:20.7554311Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode64 amd64 10.19.0~dfsg-3ubuntu1 [5765 kB] 2021-05-17T16:33:20.9863134Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode-dev amd64 10.19.0~dfsg-3ubuntu1 [370 kB] 2021-05-17T16:33:21.3883204Z Fetched 6239 kB in 0s (24.4 MB/s) 2021-05-17T16:33:21.4189608Z Selecting previously unselected package libuv1-dev:amd64. 2021-05-17T16:33:21.4258900Z (Reading database ... 2021-05-17T16:33:21.4259737Z (Reading database ... 5% 2021-05-17T16:33:21.4260960Z (Reading database ... 10% 2021-05-17T16:33:21.4261629Z (Reading database ... 15% 2021-05-17T16:33:21.4262354Z (Reading database ... 20% 2021-05-17T16:33:21.4263000Z (Reading database ... 25% 2021-05-17T16:33:21.4263646Z (Reading database ... 30% 2021-05-17T16:33:21.4264280Z (Reading database ... 35% 2021-05-17T16:33:21.4264903Z (Reading database ... 40% 2021-05-17T16:33:21.4265534Z (Reading database ... 45% 2021-05-17T16:33:21.4266169Z (Reading database ... 50% 2021-05-17T16:33:21.4295036Z (Reading database ... 55% 2021-05-17T16:33:21.4327013Z (Reading database ... 60% 2021-05-17T16:33:21.4364771Z (Reading database ... 65% 2021-05-17T16:33:21.4476105Z (Reading database ... 70% 2021-05-17T16:33:21.4578612Z (Reading database ... 75% 2021-05-17T16:33:21.4821077Z (Reading database ... 80% 2021-05-17T16:33:21.5105819Z (Reading database ... 85% 2021-05-17T16:33:21.5252303Z (Reading database ... 90% 2021-05-17T16:33:21.5322174Z (Reading database ... 95% 2021-05-17T16:33:21.5322668Z (Reading database ... 100% 2021-05-17T16:33:21.5323669Z (Reading database ... 264923 files and directories currently installed.) 2021-05-17T16:33:21.5464229Z Preparing to unpack .../libuv1-dev_1.34.2-1ubuntu1.1_amd64.deb ... 2021-05-17T16:33:21.5477577Z Unpacking libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-05-17T16:33:21.5922707Z Selecting previously unselected package libnode64:amd64. 2021-05-17T16:33:21.6125583Z Preparing to unpack .../libnode64_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-05-17T16:33:21.6152744Z Unpacking libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-17T16:33:22.2085056Z Selecting previously unselected package libnode-dev:amd64. 2021-05-17T16:33:22.2320059Z Preparing to unpack .../libnode-dev_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-05-17T16:33:22.2332189Z Unpacking libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-17T16:33:22.3232484Z Setting up libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-05-17T16:33:22.3264941Z Setting up libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-17T16:33:22.3301010Z Setting up libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-17T16:33:22.3342006Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:33:24.3079711Z Reading package lists... 2021-05-17T16:33:24.4414432Z Building dependency tree... 2021-05-17T16:33:24.4432215Z Reading state information... 2021-05-17T16:33:24.5825713Z The following additional packages will be installed: 2021-05-17T16:33:24.5829123Z libfftw3-bin libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-05-17T16:33:24.5833514Z Suggested packages: 2021-05-17T16:33:24.5834328Z libfftw3-doc 2021-05-17T16:33:24.6282899Z The following NEW packages will be installed: 2021-05-17T16:33:24.6286729Z libfftw3-bin libfftw3-dev libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-05-17T16:33:24.6488323Z 0 upgraded, 5 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:33:24.6488972Z Need to get 3986 kB of archives. 2021-05-17T16:33:24.6489989Z After this operation, 22.4 MB of additional disk space will be used. 2021-05-17T16:33:24.6491396Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-long3 amd64 3.3.8-2ubuntu1 [313 kB] 2021-05-17T16:33:24.6572780Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-quad3 amd64 3.3.8-2ubuntu1 [673 kB] 2021-05-17T16:33:24.6676297Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-single3 amd64 3.3.8-2ubuntu1 [756 kB] 2021-05-17T16:33:24.6802329Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-bin amd64 3.3.8-2ubuntu1 [32.2 kB] 2021-05-17T16:33:24.6812455Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-dev amd64 3.3.8-2ubuntu1 [2211 kB] 2021-05-17T16:33:25.1150462Z Fetched 3986 kB in 0s (50.4 MB/s) 2021-05-17T16:33:25.1454626Z Selecting previously unselected package libfftw3-long3:amd64. 2021-05-17T16:33:25.1525144Z (Reading database ... 2021-05-17T16:33:25.1526511Z (Reading database ... 5% 2021-05-17T16:33:25.1527430Z (Reading database ... 10% 2021-05-17T16:33:25.1528177Z (Reading database ... 15% 2021-05-17T16:33:25.1528919Z (Reading database ... 20% 2021-05-17T16:33:25.1530007Z (Reading database ... 25% 2021-05-17T16:33:25.1530918Z (Reading database ... 30% 2021-05-17T16:33:25.1531640Z (Reading database ... 35% 2021-05-17T16:33:25.1532483Z (Reading database ... 40% 2021-05-17T16:33:25.1533174Z (Reading database ... 45% 2021-05-17T16:33:25.1534095Z (Reading database ... 50% 2021-05-17T16:33:25.1568084Z (Reading database ... 55% 2021-05-17T16:33:25.1601046Z (Reading database ... 60% 2021-05-17T16:33:25.1637221Z (Reading database ... 65% 2021-05-17T16:33:25.1759162Z (Reading database ... 70% 2021-05-17T16:33:25.1866329Z (Reading database ... 75% 2021-05-17T16:33:25.2132416Z (Reading database ... 80% 2021-05-17T16:33:25.2423563Z (Reading database ... 85% 2021-05-17T16:33:25.2558020Z (Reading database ... 90% 2021-05-17T16:33:25.2627529Z (Reading database ... 95% 2021-05-17T16:33:25.2627993Z (Reading database ... 100% 2021-05-17T16:33:25.2628664Z (Reading database ... 265059 files and directories currently installed.) 2021-05-17T16:33:25.2754137Z Preparing to unpack .../libfftw3-long3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-17T16:33:25.2784386Z Unpacking libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-05-17T16:33:25.3363470Z Selecting previously unselected package libfftw3-quad3:amd64. 2021-05-17T16:33:25.3583406Z Preparing to unpack .../libfftw3-quad3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-17T16:33:25.3593421Z Unpacking libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-05-17T16:33:25.4604528Z Selecting previously unselected package libfftw3-single3:amd64. 2021-05-17T16:33:25.4805480Z Preparing to unpack .../libfftw3-single3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-17T16:33:25.4820723Z Unpacking libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-05-17T16:33:25.5753895Z Selecting previously unselected package libfftw3-bin. 2021-05-17T16:33:25.5997138Z Preparing to unpack .../libfftw3-bin_3.3.8-2ubuntu1_amd64.deb ... 2021-05-17T16:33:25.6013535Z Unpacking libfftw3-bin (3.3.8-2ubuntu1) ... 2021-05-17T16:33:25.6363677Z Selecting previously unselected package libfftw3-dev:amd64. 2021-05-17T16:33:25.6572596Z Preparing to unpack .../libfftw3-dev_3.3.8-2ubuntu1_amd64.deb ... 2021-05-17T16:33:25.6587118Z Unpacking libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-05-17T16:33:25.9477623Z Setting up libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-05-17T16:33:25.9518065Z Setting up libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-05-17T16:33:25.9551342Z Setting up libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-05-17T16:33:25.9585934Z Setting up libfftw3-bin (3.3.8-2ubuntu1) ... 2021-05-17T16:33:25.9619277Z Setting up libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-05-17T16:33:25.9653156Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:33:26.6954194Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:33:28.7017363Z Reading package lists... 2021-05-17T16:33:28.8275102Z Building dependency tree... 2021-05-17T16:33:28.8292980Z Reading state information... 2021-05-17T16:33:28.9663187Z The following additional packages will be installed: 2021-05-17T16:33:28.9665639Z libdcmtk14 2021-05-17T16:33:29.0108866Z The following NEW packages will be installed: 2021-05-17T16:33:29.0113208Z dcmtk libdcmtk14 2021-05-17T16:33:29.0302735Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:33:29.0303858Z Need to get 5546 kB of archives. 2021-05-17T16:33:29.0304572Z After this operation, 26.5 MB of additional disk space will be used. 2021-05-17T16:33:29.0306564Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdcmtk14 amd64 3.6.4-2.1build2 [4682 kB] 2021-05-17T16:33:29.1001653Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 dcmtk amd64 3.6.4-2.1build2 [864 kB] 2021-05-17T16:33:29.5077923Z Fetched 5546 kB in 0s (56.8 MB/s) 2021-05-17T16:33:29.5404099Z Selecting previously unselected package libdcmtk14. 2021-05-17T16:33:29.5459637Z (Reading database ... 2021-05-17T16:33:29.5460927Z (Reading database ... 5% 2021-05-17T16:33:29.5461679Z (Reading database ... 10% 2021-05-17T16:33:29.5462210Z (Reading database ... 15% 2021-05-17T16:33:29.5462658Z (Reading database ... 20% 2021-05-17T16:33:29.5463133Z (Reading database ... 25% 2021-05-17T16:33:29.5463746Z (Reading database ... 30% 2021-05-17T16:33:29.5464320Z (Reading database ... 35% 2021-05-17T16:33:29.5464739Z (Reading database ... 40% 2021-05-17T16:33:29.5465162Z (Reading database ... 45% 2021-05-17T16:33:29.5465570Z (Reading database ... 50% 2021-05-17T16:33:29.5505955Z (Reading database ... 55% 2021-05-17T16:33:29.5543412Z (Reading database ... 60% 2021-05-17T16:33:29.5585615Z (Reading database ... 65% 2021-05-17T16:33:29.5706592Z (Reading database ... 70% 2021-05-17T16:33:29.5812117Z (Reading database ... 75% 2021-05-17T16:33:29.6058068Z (Reading database ... 80% 2021-05-17T16:33:29.6323042Z (Reading database ... 85% 2021-05-17T16:33:29.6462958Z (Reading database ... 90% 2021-05-17T16:33:29.6532422Z (Reading database ... 95% 2021-05-17T16:33:29.6533176Z (Reading database ... 100% 2021-05-17T16:33:29.6534035Z (Reading database ... 265150 files and directories currently installed.) 2021-05-17T16:33:29.6659567Z Preparing to unpack .../libdcmtk14_3.6.4-2.1build2_amd64.deb ... 2021-05-17T16:33:29.6693519Z Unpacking libdcmtk14 (3.6.4-2.1build2) ... 2021-05-17T16:33:30.1723156Z Selecting previously unselected package dcmtk. 2021-05-17T16:33:30.1950366Z Preparing to unpack .../dcmtk_3.6.4-2.1build2_amd64.deb ... 2021-05-17T16:33:30.2015791Z Unpacking dcmtk (3.6.4-2.1build2) ... 2021-05-17T16:33:30.3458119Z Setting up libdcmtk14 (3.6.4-2.1build2) ... 2021-05-17T16:33:30.3497067Z Setting up dcmtk (3.6.4-2.1build2) ... 2021-05-17T16:33:30.3633589Z Adding `dcmtk' group to system ... 2021-05-17T16:33:30.5737598Z Adding `dcmtk' user to system ... 2021-05-17T16:33:30.7096505Z adduser: Warning: The home directory `/var/lib/dcmtk/db' does not belong to the user you are currently creating. 2021-05-17T16:33:30.9768290Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:33:32.5176092Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:33:34.5642538Z Reading package lists... 2021-05-17T16:33:34.7221809Z Building dependency tree... 2021-05-17T16:33:34.7242987Z Reading state information... 2021-05-17T16:33:34.9544161Z libsecret-1-dev is already the newest version (0.20.3-0ubuntu1). 2021-05-17T16:33:34.9545687Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:33:35.0177467Z Reading package lists... 2021-05-17T16:33:35.1480181Z Building dependency tree... 2021-05-17T16:33:35.1497551Z Reading state information... 2021-05-17T16:33:35.3776642Z libpng-dev is already the newest version (1.6.37-2). 2021-05-17T16:33:35.3778652Z libpng-dev set to manually installed. 2021-05-17T16:33:35.3781939Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:33:35.4397419Z Reading package lists... 2021-05-17T16:33:35.5681256Z Building dependency tree... 2021-05-17T16:33:35.5700631Z Reading state information... 2021-05-17T16:33:35.7099900Z The following additional packages will be installed: 2021-05-17T16:33:35.7101922Z libopenjp2-7 libpoppler-cpp0v5 libpoppler-dev libpoppler97 poppler-data 2021-05-17T16:33:35.7106117Z Suggested packages: 2021-05-17T16:33:35.7107674Z poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho 2021-05-17T16:33:35.7109224Z fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai 2021-05-17T16:33:35.7110515Z fonts-arphic-uming fonts-nanum 2021-05-17T16:33:35.7523897Z The following NEW packages will be installed: 2021-05-17T16:33:35.7525540Z libopenjp2-7 libpoppler-cpp-dev libpoppler-cpp0v5 libpoppler-dev 2021-05-17T16:33:35.7530012Z libpoppler97 poppler-data 2021-05-17T16:33:35.7715134Z 0 upgraded, 6 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:33:35.7715961Z Need to get 2582 kB of archives. 2021-05-17T16:33:35.7716584Z After this operation, 16.7 MB of additional disk space will be used. 2021-05-17T16:33:35.7717999Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 poppler-data all 0.4.9-2 [1475 kB] 2021-05-17T16:33:35.7969293Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopenjp2-7 amd64 2.3.1-1ubuntu4.20.04.1 [141 kB] 2021-05-17T16:33:35.7996156Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler97 amd64 0.86.1-0ubuntu1 [915 kB] 2021-05-17T16:33:35.8129456Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp0v5 amd64 0.86.1-0ubuntu1 [35.6 kB] 2021-05-17T16:33:35.8140363Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-dev amd64 0.86.1-0ubuntu1 [5336 B] 2021-05-17T16:33:35.8145419Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp-dev amd64 0.86.1-0ubuntu1 [10.4 kB] 2021-05-17T16:33:36.2117919Z Fetched 2582 kB in 0s (45.1 MB/s) 2021-05-17T16:33:36.2440618Z Selecting previously unselected package poppler-data. 2021-05-17T16:33:36.2508072Z (Reading database ... 2021-05-17T16:33:36.2508789Z (Reading database ... 5% 2021-05-17T16:33:36.2509591Z (Reading database ... 10% 2021-05-17T16:33:36.2510340Z (Reading database ... 15% 2021-05-17T16:33:36.2512134Z (Reading database ... 20% 2021-05-17T16:33:36.2513165Z (Reading database ... 25% 2021-05-17T16:33:36.2513651Z (Reading database ... 30% 2021-05-17T16:33:36.2515396Z (Reading database ... 35% 2021-05-17T16:33:36.2515863Z (Reading database ... 40% 2021-05-17T16:33:36.2517832Z (Reading database ... 45% 2021-05-17T16:33:36.2519427Z (Reading database ... 50% 2021-05-17T16:33:36.2556327Z (Reading database ... 55% 2021-05-17T16:33:36.2592856Z (Reading database ... 60% 2021-05-17T16:33:36.2628552Z (Reading database ... 65% 2021-05-17T16:33:36.2740980Z (Reading database ... 70% 2021-05-17T16:33:36.2851823Z (Reading database ... 75% 2021-05-17T16:33:36.3109707Z (Reading database ... 80% 2021-05-17T16:33:36.3388250Z (Reading database ... 85% 2021-05-17T16:33:36.3518567Z (Reading database ... 90% 2021-05-17T16:33:36.3589010Z (Reading database ... 95% 2021-05-17T16:33:36.3589716Z (Reading database ... 100% 2021-05-17T16:33:36.3590883Z (Reading database ... 265385 files and directories currently installed.) 2021-05-17T16:33:36.3713144Z Preparing to unpack .../0-poppler-data_0.4.9-2_all.deb ... 2021-05-17T16:33:36.3737513Z Unpacking poppler-data (0.4.9-2) ... 2021-05-17T16:33:36.6284161Z Selecting previously unselected package libopenjp2-7:amd64. 2021-05-17T16:33:36.6491606Z Preparing to unpack .../1-libopenjp2-7_2.3.1-1ubuntu4.20.04.1_amd64.deb ... 2021-05-17T16:33:36.6520999Z Unpacking libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-05-17T16:33:36.6963444Z Selecting previously unselected package libpoppler97:amd64. 2021-05-17T16:33:36.7188565Z Preparing to unpack .../2-libpoppler97_0.86.1-0ubuntu1_amd64.deb ... 2021-05-17T16:33:36.7206414Z Unpacking libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-05-17T16:33:36.8323296Z Selecting previously unselected package libpoppler-cpp0v5:amd64. 2021-05-17T16:33:36.8547593Z Preparing to unpack .../3-libpoppler-cpp0v5_0.86.1-0ubuntu1_amd64.deb ... 2021-05-17T16:33:36.8563242Z Unpacking libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-05-17T16:33:36.8817872Z Selecting previously unselected package libpoppler-dev:amd64. 2021-05-17T16:33:36.9103669Z Preparing to unpack .../4-libpoppler-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-05-17T16:33:36.9113685Z Unpacking libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-17T16:33:36.9403995Z Selecting previously unselected package libpoppler-cpp-dev:amd64. 2021-05-17T16:33:36.9624045Z Preparing to unpack .../5-libpoppler-cpp-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-05-17T16:33:36.9634964Z Unpacking libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-17T16:33:37.0234715Z Setting up poppler-data (0.4.9-2) ... 2021-05-17T16:33:37.0348467Z Setting up libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-05-17T16:33:37.0407481Z Setting up libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-05-17T16:33:37.0445302Z Setting up libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-05-17T16:33:37.0480247Z Setting up libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-17T16:33:37.0514708Z Setting up libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-17T16:33:37.0554827Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-17T16:33:37.1881340Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:33:39.1729008Z Reading package lists... 2021-05-17T16:33:39.3134669Z Building dependency tree... 2021-05-17T16:33:39.3153643Z Reading state information... 2021-05-17T16:33:39.4615257Z The following additional packages will be installed: 2021-05-17T16:33:39.4620926Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libsz2 2021-05-17T16:33:39.4625531Z Suggested packages: 2021-05-17T16:33:39.4627415Z libhdf5-doc 2021-05-17T16:33:39.5064657Z The following NEW packages will be installed: 2021-05-17T16:33:39.5069876Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libhdf5-dev 2021-05-17T16:33:39.5075157Z libsz2 2021-05-17T16:33:40.4665007Z 0 upgraded, 7 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:33:40.4666106Z Need to get 4074 kB of archives. 2021-05-17T16:33:40.4666880Z After this operation, 17.6 MB of additional disk space will be used. 2021-05-17T16:33:40.4671409Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 hdf5-helpers amd64 1.10.4+repack-11ubuntu1 [13.6 kB] 2021-05-17T16:33:40.4684646Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec0 amd64 1.0.4-1 [19.1 kB] 2021-05-17T16:33:40.4691291Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsz2 amd64 1.0.4-1 [5188 B] 2021-05-17T16:33:40.4715613Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-103 amd64 1.10.4+repack-11ubuntu1 [1311 kB] 2021-05-17T16:33:40.4899699Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-cpp-103 amd64 1.10.4+repack-11ubuntu1 [120 kB] 2021-05-17T16:33:40.4916636Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec-dev amd64 1.0.4-1 [16.9 kB] 2021-05-17T16:33:40.4965907Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-dev amd64 1.10.4+repack-11ubuntu1 [2589 kB] 2021-05-17T16:33:40.9487079Z Fetched 4074 kB in 1s (3845 kB/s) 2021-05-17T16:33:40.9745554Z Selecting previously unselected package hdf5-helpers. 2021-05-17T16:33:40.9814796Z (Reading database ... 2021-05-17T16:33:40.9815286Z (Reading database ... 5% 2021-05-17T16:33:40.9815718Z (Reading database ... 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2021-05-17T16:33:41.0884420Z (Reading database ... 265945 files and directories currently installed.) 2021-05-17T16:33:41.1019946Z Preparing to unpack .../0-hdf5-helpers_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-17T16:33:41.1036709Z Unpacking hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-05-17T16:33:41.1363732Z Selecting previously unselected package libaec0:amd64. 2021-05-17T16:33:41.1592121Z Preparing to unpack .../1-libaec0_1.0.4-1_amd64.deb ... 2021-05-17T16:33:41.1618698Z Unpacking libaec0:amd64 (1.0.4-1) ... 2021-05-17T16:33:41.1908535Z Selecting previously unselected package libsz2:amd64. 2021-05-17T16:33:41.2142486Z Preparing to unpack .../2-libsz2_1.0.4-1_amd64.deb ... 2021-05-17T16:33:41.2154339Z Unpacking libsz2:amd64 (1.0.4-1) ... 2021-05-17T16:33:41.2421939Z Selecting previously unselected package libhdf5-103:amd64. 2021-05-17T16:33:41.2711296Z Preparing to unpack .../3-libhdf5-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-17T16:33:41.2729870Z Unpacking libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-17T16:33:41.4204455Z Selecting previously unselected package libhdf5-cpp-103:amd64. 2021-05-17T16:33:41.4473113Z Preparing to unpack .../4-libhdf5-cpp-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-17T16:33:41.4487200Z Unpacking libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-17T16:33:41.4844347Z Selecting previously unselected package libaec-dev:amd64. 2021-05-17T16:33:41.5087733Z Preparing to unpack .../5-libaec-dev_1.0.4-1_amd64.deb ... 2021-05-17T16:33:41.5098791Z Unpacking libaec-dev:amd64 (1.0.4-1) ... 2021-05-17T16:33:41.5354142Z Selecting previously unselected package libhdf5-dev. 2021-05-17T16:33:41.5621342Z Preparing to unpack .../6-libhdf5-dev_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-17T16:33:41.5632744Z Unpacking libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-05-17T16:33:41.8688150Z Setting up hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-05-17T16:33:41.8720291Z Setting up libaec0:amd64 (1.0.4-1) ... 2021-05-17T16:33:41.8757434Z Setting up libsz2:amd64 (1.0.4-1) ... 2021-05-17T16:33:41.8789486Z Setting up libaec-dev:amd64 (1.0.4-1) ... 2021-05-17T16:33:41.8821838Z Setting up libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-17T16:33:41.8853120Z Setting up libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-17T16:33:41.8887156Z Setting up libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-05-17T16:33:41.8964113Z update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 2021-05-17T16:33:41.8994985Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:33:42.6429822Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:33:44.6557723Z Reading package lists... 2021-05-17T16:33:44.7876214Z Building dependency tree... 2021-05-17T16:33:44.7894357Z Reading state information... 2021-05-17T16:33:44.9329087Z The following additional packages will be installed: 2021-05-17T16:33:44.9332382Z libdrm-dev libgl-dev libglu1-mesa libglx-dev 2021-05-17T16:33:44.9827031Z The following NEW packages will be installed: 2021-05-17T16:33:44.9829607Z libdrm-dev libgl-dev libglu1-mesa libglu1-mesa-dev libglx-dev 2021-05-17T16:33:44.9830899Z mesa-common-dev 2021-05-17T16:33:45.0018370Z 0 upgraded, 6 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:33:45.0019772Z Need to get 1761 kB of archives. 2021-05-17T16:33:45.0020920Z After this operation, 5442 kB of additional disk space will be used. 2021-05-17T16:33:45.0022562Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libdrm-dev amd64 2.4.102-1ubuntu1~20.04.1 [126 kB] 2021-05-17T16:33:45.0067628Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libglx-dev amd64 1.3.2-1~ubuntu0.20.04.1 [14.0 kB] 2021-05-17T16:33:45.0075520Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [97.8 kB] 2021-05-17T16:33:45.0098922Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa amd64 9.0.1-1build1 [168 kB] 2021-05-17T16:33:45.0181709Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa-dev amd64 9.0.1-1build1 [207 kB] 2021-05-17T16:33:45.0215704Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-common-dev amd64 20.2.6-0ubuntu0.20.04.1 [1148 kB] 2021-05-17T16:33:45.4552995Z Fetched 1761 kB in 0s (34.1 MB/s) 2021-05-17T16:33:45.4884657Z Selecting previously unselected package libdrm-dev:amd64. 2021-05-17T16:33:45.4918131Z (Reading database ... 2021-05-17T16:33:45.4918661Z (Reading database ... 5% 2021-05-17T16:33:45.4919122Z (Reading database ... 10% 2021-05-17T16:33:45.4919915Z (Reading database ... 15% 2021-05-17T16:33:45.4920352Z (Reading database ... 20% 2021-05-17T16:33:45.4920783Z (Reading database ... 25% 2021-05-17T16:33:45.4921235Z (Reading database ... 30% 2021-05-17T16:33:45.4921997Z (Reading database ... 35% 2021-05-17T16:33:45.4922450Z (Reading database ... 40% 2021-05-17T16:33:45.4922901Z (Reading database ... 45% 2021-05-17T16:33:45.4923342Z (Reading database ... 50% 2021-05-17T16:33:45.4965202Z (Reading database ... 55% 2021-05-17T16:33:45.5000647Z (Reading database ... 60% 2021-05-17T16:33:45.5040128Z (Reading database ... 65% 2021-05-17T16:33:45.5156896Z (Reading database ... 70% 2021-05-17T16:33:45.5263558Z (Reading database ... 75% 2021-05-17T16:33:45.5512491Z (Reading database ... 80% 2021-05-17T16:33:45.5792308Z (Reading database ... 85% 2021-05-17T16:33:45.5925213Z (Reading database ... 90% 2021-05-17T16:33:45.5995770Z (Reading database ... 95% 2021-05-17T16:33:45.5996517Z (Reading database ... 100% 2021-05-17T16:33:45.5997700Z (Reading database ... 266153 files and directories currently installed.) 2021-05-17T16:33:45.6121333Z Preparing to unpack .../0-libdrm-dev_2.4.102-1ubuntu1~20.04.1_amd64.deb ... 2021-05-17T16:33:45.6132528Z Unpacking libdrm-dev:amd64 (2.4.102-1ubuntu1~20.04.1) ... 2021-05-17T16:33:45.6563730Z Selecting previously unselected package libglx-dev:amd64. 2021-05-17T16:33:45.6794618Z Preparing to unpack .../1-libglx-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-17T16:33:45.6806933Z Unpacking libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-17T16:33:45.7524777Z Selecting previously unselected package libgl-dev:amd64. 2021-05-17T16:33:45.7754479Z Preparing to unpack .../2-libgl-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-17T16:33:45.7768482Z Unpacking libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-17T16:33:45.8164047Z Selecting previously unselected package libglu1-mesa:amd64. 2021-05-17T16:33:45.8425911Z Preparing to unpack .../3-libglu1-mesa_9.0.1-1build1_amd64.deb ... 2021-05-17T16:33:45.8448878Z Unpacking libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-05-17T16:33:45.8915987Z Selecting previously unselected package libglu1-mesa-dev:amd64. 2021-05-17T16:33:45.9155543Z Preparing to unpack .../4-libglu1-mesa-dev_9.0.1-1build1_amd64.deb ... 2021-05-17T16:33:45.9168697Z Unpacking libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-05-17T16:33:45.9589484Z Selecting previously unselected package mesa-common-dev:amd64. 2021-05-17T16:33:45.9869327Z Preparing to unpack .../5-mesa-common-dev_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-17T16:33:45.9879606Z Unpacking mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-17T16:33:46.1527138Z Setting up libdrm-dev:amd64 (2.4.102-1ubuntu1~20.04.1) ... 2021-05-17T16:33:46.1567659Z Setting up libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-17T16:33:46.1602165Z Setting up libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-05-17T16:33:46.1642888Z Setting up libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-17T16:33:46.1677466Z Setting up libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-05-17T16:33:46.1714996Z Setting up mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-17T16:33:46.1816025Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:33:47.5176453Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:33:49.5131343Z Reading package lists... 2021-05-17T16:33:49.6458814Z Building dependency tree... 2021-05-17T16:33:49.6477133Z Reading state information... 2021-05-17T16:33:49.7877031Z The following additional packages will be installed: 2021-05-17T16:33:49.7878999Z libprotobuf-lite17 libprotoc17 2021-05-17T16:33:49.8293115Z The following NEW packages will be installed: 2021-05-17T16:33:49.8295022Z libprotobuf-dev libprotobuf-lite17 libprotoc-dev libprotoc17 2021-05-17T16:33:49.8296041Z protobuf-compiler 2021-05-17T16:33:49.8484369Z 0 upgraded, 5 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:33:49.8485013Z Need to get 2754 kB of archives. 2021-05-17T16:33:49.8485627Z After this operation, 19.9 MB of additional disk space will be used. 2021-05-17T16:33:49.8487056Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-lite17 amd64 3.6.1.3-2ubuntu5 [132 kB] 2021-05-17T16:33:49.8535264Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc17 amd64 3.6.1.3-2ubuntu5 [646 kB] 2021-05-17T16:33:49.8633422Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-dev amd64 3.6.1.3-2ubuntu5 [1155 kB] 2021-05-17T16:33:49.8797654Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc-dev amd64 3.6.1.3-2ubuntu5 [793 kB] 2021-05-17T16:33:49.8908327Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 protobuf-compiler amd64 3.6.1.3-2ubuntu5 [27.6 kB] 2021-05-17T16:33:50.2857686Z Fetched 2754 kB in 0s (48.5 MB/s) 2021-05-17T16:33:50.3203753Z Selecting previously unselected package libprotobuf-lite17:amd64. 2021-05-17T16:33:50.3232708Z (Reading database ... 2021-05-17T16:33:50.3233594Z (Reading database ... 5% 2021-05-17T16:33:50.3234216Z (Reading database ... 10% 2021-05-17T16:33:50.3234653Z (Reading database ... 15% 2021-05-17T16:33:50.3235103Z (Reading database ... 20% 2021-05-17T16:33:50.3235536Z (Reading database ... 25% 2021-05-17T16:33:50.3236143Z (Reading database ... 30% 2021-05-17T16:33:50.3236594Z (Reading database ... 35% 2021-05-17T16:33:50.3237739Z (Reading database ... 40% 2021-05-17T16:33:50.3238208Z (Reading database ... 45% 2021-05-17T16:33:50.3238634Z (Reading database ... 50% 2021-05-17T16:33:50.3274456Z (Reading database ... 55% 2021-05-17T16:33:50.3310216Z (Reading database ... 60% 2021-05-17T16:33:50.3346914Z (Reading database ... 65% 2021-05-17T16:33:50.3458574Z (Reading database ... 70% 2021-05-17T16:33:50.3559468Z (Reading database ... 75% 2021-05-17T16:33:50.3808691Z (Reading database ... 80% 2021-05-17T16:33:50.4094515Z (Reading database ... 85% 2021-05-17T16:33:50.4236549Z (Reading database ... 90% 2021-05-17T16:33:50.4308720Z (Reading database ... 95% 2021-05-17T16:33:50.4309228Z (Reading database ... 100% 2021-05-17T16:33:50.4310041Z (Reading database ... 266636 files and directories currently installed.) 2021-05-17T16:33:50.4439638Z Preparing to unpack .../libprotobuf-lite17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-17T16:33:50.4464748Z Unpacking libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-17T16:33:50.4822951Z Selecting previously unselected package libprotoc17:amd64. 2021-05-17T16:33:50.5098096Z Preparing to unpack .../libprotoc17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-17T16:33:50.5111817Z Unpacking libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-17T16:33:50.6004585Z Selecting previously unselected package libprotobuf-dev:amd64. 2021-05-17T16:33:50.6239210Z Preparing to unpack .../libprotobuf-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-17T16:33:50.6250320Z Unpacking libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-17T16:33:50.7845120Z Selecting previously unselected package libprotoc-dev:amd64. 2021-05-17T16:33:50.8132083Z Preparing to unpack .../libprotoc-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-17T16:33:50.8145127Z Unpacking libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-17T16:33:50.9363529Z Selecting previously unselected package protobuf-compiler. 2021-05-17T16:33:50.9588454Z Preparing to unpack .../protobuf-compiler_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-17T16:33:50.9599895Z Unpacking protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-05-17T16:33:51.0181350Z Setting up libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-17T16:33:51.0214143Z Setting up protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-05-17T16:33:51.0304574Z Setting up libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-17T16:33:51.0347750Z Setting up libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-17T16:33:51.0382944Z Setting up libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-17T16:33:51.0422935Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:33:51.7504345Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:33:53.7435196Z Reading package lists... 2021-05-17T16:33:53.8687947Z Building dependency tree... 2021-05-17T16:33:54.6740348Z Reading state information... 2021-05-17T16:33:54.6749281Z The following additional packages will be installed: 2021-05-17T16:33:54.6752179Z i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 libasyncns0 2021-05-17T16:33:54.6754792Z libavc1394-0 libavcodec58 libavdevice58 libavfilter7 libavformat58 2021-05-17T16:33:54.6756698Z libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 libcaca0 2021-05-17T16:33:54.6758385Z libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 libcodec2-0.9 2021-05-17T16:33:54.6760789Z libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 libigdgmm11 2021-05-17T16:33:54.6768473Z libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-05-17T16:33:54.6769971Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-05-17T16:33:54.6772022Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-05-17T16:33:54.6773800Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-05-17T16:33:54.6776668Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-05-17T16:33:54.6778770Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-05-17T16:33:54.6780438Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-05-17T16:33:54.6781916Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-05-17T16:33:54.6783385Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-05-17T16:33:54.6784031Z Suggested packages: 2021-05-17T16:33:54.6785628Z ffmpeg-doc i965-va-driver-shaders libbluray-bdj jackd2 libportaudio2 2021-05-17T16:33:54.6787733Z opus-tools pulseaudio libraw1394-doc serdi sndiod sordi speex opencl-icd 2021-05-17T16:33:54.6789432Z libvdpau-va-gl1 nvidia-vdpau-driver nvidia-legacy-340xx-vdpau-driver 2021-05-17T16:33:54.6791097Z nvidia-legacy-304xx-vdpau-driver 2021-05-17T16:33:54.6791867Z The following NEW packages will be installed: 2021-05-17T16:33:54.6793290Z ffmpeg i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 2021-05-17T16:33:54.6794717Z libasyncns0 libavc1394-0 libavcodec58 libavdevice58 libavfilter7 2021-05-17T16:33:54.6795697Z libavformat58 libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 2021-05-17T16:33:54.6797090Z libcaca0 libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 2021-05-17T16:33:54.6798568Z libcodec2-0.9 libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 2021-05-17T16:33:54.6800122Z libigdgmm11 libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-05-17T16:33:54.6801312Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-05-17T16:33:54.6806015Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-05-17T16:33:54.6808224Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-05-17T16:33:54.6810531Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-05-17T16:33:54.6812775Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-05-17T16:33:54.6814505Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-05-17T16:33:54.6816906Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-05-17T16:33:54.6818379Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-05-17T16:33:54.6820169Z 0 upgraded, 76 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:33:54.6821774Z Need to get 47.1 MB of archives. 2021-05-17T16:33:54.6822947Z After this operation, 195 MB of additional disk space will be used. 2021-05-17T16:33:54.6825497Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaom0 amd64 1.0.0.errata1-3build1 [1160 kB] 2021-05-17T16:33:54.6827618Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva2 amd64 2.7.0-2 [53.5 kB] 2021-05-17T16:33:54.6829190Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-drm2 amd64 2.7.0-2 [7044 B] 2021-05-17T16:33:54.6831876Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-x11-2 amd64 2.7.0-2 [11.9 kB] 2021-05-17T16:33:54.6834450Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvdpau1 amd64 1.3-1ubuntu2 [25.6 kB] 2021-05-17T16:33:54.6836638Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1ubuntu1 [30.3 kB] 2021-05-17T16:33:54.6838863Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavutil56 amd64 7:4.2.4-1ubuntu0.1 [241 kB] 2021-05-17T16:33:54.6841013Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcodec2-0.9 amd64 0.9.2-2 [7886 kB] 2021-05-17T16:33:54.6843684Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgsm1 amd64 1.0.18-2 [24.4 kB] 2021-05-17T16:33:54.6850337Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmp3lame0 amd64 3.100-3 [133 kB] 2021-05-17T16:33:54.6852306Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libopus0 amd64 1.3.1-0ubuntu1 [191 kB] 2021-05-17T16:33:54.6853864Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libshine3 amd64 3.1.1-2 [23.2 kB] 2021-05-17T16:33:54.6855846Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsnappy1v5 amd64 1.1.8-1build1 [16.7 kB] 2021-05-17T16:33:54.6857789Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libspeex1 amd64 1.2~rc1.2-1.1ubuntu1 [53.2 kB] 2021-05-17T16:33:54.6859751Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsoxr0 amd64 0.1.3-2build1 [78.0 kB] 2021-05-17T16:33:54.6861653Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswresample3 amd64 7:4.2.4-1ubuntu0.1 [57.1 kB] 2021-05-17T16:33:54.6863807Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtheora0 amd64 1.1.1+dfsg.1-15ubuntu2 [162 kB] 2021-05-17T16:33:54.6865878Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtwolame0 amd64 0.4.0-2 [47.6 kB] 2021-05-17T16:33:54.6867691Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvorbisenc2 amd64 1.3.6-2ubuntu1 [70.7 kB] 2021-05-17T16:33:54.6869945Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwavpack1 amd64 5.2.0-1ubuntu0.1 [77.3 kB] 2021-05-17T16:33:54.6872201Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx264-155 amd64 2:0.155.2917+git0a84d98-2 [521 kB] 2021-05-17T16:33:54.6874292Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx265-179 amd64 3.2.1-1build1 [1060 kB] 2021-05-17T16:33:54.6876285Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxvidcore4 amd64 2:1.3.7-1 [201 kB] 2021-05-17T16:33:54.6878532Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi-common all 0.2.35-17 [32.5 kB] 2021-05-17T16:33:54.6880433Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi0 amd64 0.2.35-17 [237 kB] 2021-05-17T16:33:54.6882469Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavcodec58 amd64 7:4.2.4-1ubuntu0.1 [4876 kB] 2021-05-17T16:33:54.6884592Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libraw1394-11 amd64 2.1.2-1 [30.7 kB] 2021-05-17T16:33:54.6886672Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavc1394-0 amd64 0.5.4-5 [16.2 kB] 2021-05-17T16:33:54.6888532Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libass9 amd64 1:0.14.0-2 [88.0 kB] 2021-05-17T16:33:54.6890353Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbluray2 amd64 1:1.2.0-1 [138 kB] 2021-05-17T16:33:54.6891843Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libchromaprint1 amd64 1.4.3-3build1 [37.6 kB] 2021-05-17T16:33:54.6893345Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgme0 amd64 0.6.2-1build1 [123 kB] 2021-05-17T16:33:54.6896093Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmpg123-0 amd64 1.25.13-1 [124 kB] 2021-05-17T16:33:54.6897740Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenmpt0 amd64 0.4.11-1build1 [599 kB] 2021-05-17T16:33:54.6899583Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-gcrypt-4 amd64 0.9.3-2ubuntu2.1 [201 kB] 2021-05-17T16:33:54.6901394Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavformat58 amd64 7:4.2.4-1ubuntu0.1 [981 kB] 2021-05-17T16:33:54.6903288Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbs2b0 amd64 3.1.0+dfsg-2.2build1 [10.2 kB] 2021-05-17T16:33:54.6906042Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libflite1 amd64 2.1-release-3 [12.8 MB] 2021-05-17T16:33:54.8000589Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libserd-0-0 amd64 0.30.2-1 [46.6 kB] 2021-05-17T16:33:54.8008566Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsord-0-0 amd64 0.16.4-1 [19.5 kB] 2021-05-17T16:33:54.8010270Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsratom-0-0 amd64 0.6.4-1 [16.9 kB] 2021-05-17T16:33:54.8014305Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 liblilv-0-0 amd64 0.24.6-1ubuntu0.1 [40.6 kB] 2021-05-17T16:33:54.8018876Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmysofa1 amd64 1.0~dfsg0-1 [39.2 kB] 2021-05-17T16:33:54.8023851Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libpostproc55 amd64 7:4.2.4-1ubuntu0.1 [55.3 kB] 2021-05-17T16:33:54.8035100Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsamplerate0 amd64 0.1.9-2 [939 kB] 2021-05-17T16:33:54.8205184Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 librubberband2 amd64 1.8.2-1build1 [89.4 kB] 2021-05-17T16:33:54.8232423Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswscale5 amd64 7:4.2.4-1ubuntu0.1 [156 kB] 2021-05-17T16:33:54.8257722Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libvidstab1.1 amd64 1.1.0-2 [35.0 kB] 2021-05-17T16:33:54.8266190Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavfilter7 amd64 7:4.2.4-1ubuntu0.1 [1084 kB] 2021-05-17T16:33:54.8456735Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcaca0 amd64 0.99.beta19-2.1ubuntu1.20.04.1 [202 kB] 2021-05-17T16:33:54.8494541Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio18 amd64 2.0.0-2 [58.6 kB] 2021-05-17T16:33:54.8511591Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-cdda2 amd64 10.2+2.0.0-1 [17.6 kB] 2021-05-17T16:33:54.8518059Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-paranoia2 amd64 10.2+2.0.0-1 [16.2 kB] 2021-05-17T16:33:54.8525504Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdc1394-22 amd64 2.2.5-2.1 [79.6 kB] 2021-05-17T16:33:54.8543416Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libiec61883-0 amd64 1.2.0-3 [24.3 kB] 2021-05-17T16:33:54.8552886Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjack-jackd2-0 amd64 1.9.12~dfsg-2ubuntu2 [267 kB] 2021-05-17T16:33:54.8609150Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal-data all 1:1.19.1-1 [162 kB] 2021-05-17T16:33:54.8643171Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsndio7.0 amd64 1.5.0-3 [24.5 kB] 2021-05-17T16:33:54.8652360Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal1 amd64 1:1.19.1-1 [492 kB] 2021-05-17T16:33:54.8737601Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasyncns0 amd64 0.8-6 [12.1 kB] 2021-05-17T16:33:54.8746594Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libflac8 amd64 1.3.3-1build1 [103 kB] 2021-05-17T16:33:54.8775154Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsndfile1 amd64 1.0.28-7 [170 kB] 2021-05-17T16:33:54.8815399Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libpulse0 amd64 1:13.99.1-1ubuntu3.10 [262 kB] 2021-05-17T16:33:54.8866355Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsdl2-2.0-0 amd64 2.0.10+dfsg1-3 [407 kB] 2021-05-17T16:33:54.8932155Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavdevice58 amd64 7:4.2.4-1ubuntu0.1 [74.3 kB] 2021-05-17T16:33:54.8957349Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavresample4 amd64 7:4.2.4-1ubuntu0.1 [54.2 kB] 2021-05-17T16:33:54.8973058Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 ffmpeg amd64 7:4.2.4-1ubuntu0.1 [1453 kB] 2021-05-17T16:33:54.9262471Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libigdgmm11 amd64 20.1.1+ds1-1 [111 kB] 2021-05-17T16:33:54.9281216Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 intel-media-va-driver amd64 20.1.1+dfsg1-1 [1764 kB] 2021-05-17T16:33:54.9607049Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaacs0 amd64 0.9.0-2 [50.1 kB] 2021-05-17T16:33:54.9612104Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbdplus0 amd64 0.1.2-3 [47.3 kB] 2021-05-17T16:33:54.9624979Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 mesa-va-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2618 kB] 2021-05-17T16:33:55.0130665Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-vdpau-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2744 kB] 2021-05-17T16:33:55.0524287Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 i965-va-driver amd64 2.4.0-0ubuntu1 [924 kB] 2021-05-17T16:33:55.0632885Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 va-driver-all amd64 2.7.0-2 [4020 B] 2021-05-17T16:33:55.0642155Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 vdpau-driver-all amd64 1.3-1ubuntu2 [4596 B] 2021-05-17T16:33:55.6024469Z Fetched 47.1 MB in 1s (48.2 MB/s) 2021-05-17T16:33:55.6335017Z Selecting previously unselected package libaom0:amd64. 2021-05-17T16:33:55.6404141Z (Reading database ... 2021-05-17T16:33:55.6405521Z (Reading database ... 5% 2021-05-17T16:33:55.6406136Z (Reading database ... 10% 2021-05-17T16:33:55.6406660Z (Reading database ... 15% 2021-05-17T16:33:55.6408030Z (Reading database ... 20% 2021-05-17T16:33:55.6408889Z (Reading database ... 25% 2021-05-17T16:33:55.6409466Z (Reading database ... 30% 2021-05-17T16:33:55.6410832Z (Reading database ... 35% 2021-05-17T16:33:55.6411271Z (Reading database ... 40% 2021-05-17T16:33:55.6412070Z (Reading database ... 45% 2021-05-17T16:33:55.6412515Z (Reading database ... 50% 2021-05-17T16:33:55.6449183Z (Reading database ... 55% 2021-05-17T16:33:55.6480644Z (Reading database ... 60% 2021-05-17T16:33:55.6518123Z (Reading database ... 65% 2021-05-17T16:33:55.6627885Z (Reading database ... 70% 2021-05-17T16:33:55.6741450Z (Reading database ... 75% 2021-05-17T16:33:55.6981451Z (Reading database ... 80% 2021-05-17T16:33:55.7244900Z (Reading database ... 85% 2021-05-17T16:33:55.7370694Z (Reading database ... 90% 2021-05-17T16:33:55.7437295Z (Reading database ... 95% 2021-05-17T16:33:55.7437802Z (Reading database ... 100% 2021-05-17T16:33:55.7438456Z (Reading database ... 266807 files and directories currently installed.) 2021-05-17T16:33:55.7552059Z Preparing to unpack .../00-libaom0_1.0.0.errata1-3build1_amd64.deb ... 2021-05-17T16:33:55.7578431Z Unpacking libaom0:amd64 (1.0.0.errata1-3build1) ... 2021-05-17T16:33:55.8963450Z Selecting previously unselected package libva2:amd64. 2021-05-17T16:33:55.9185084Z Preparing to unpack .../01-libva2_2.7.0-2_amd64.deb ... 2021-05-17T16:33:55.9198906Z Unpacking libva2:amd64 (2.7.0-2) ... 2021-05-17T16:33:55.9557839Z Selecting previously unselected package libva-drm2:amd64. 2021-05-17T16:33:55.9771866Z Preparing to unpack .../02-libva-drm2_2.7.0-2_amd64.deb ... 2021-05-17T16:33:55.9782844Z Unpacking libva-drm2:amd64 (2.7.0-2) ... 2021-05-17T16:33:56.0081453Z Selecting previously unselected package libva-x11-2:amd64. 2021-05-17T16:33:56.0285602Z Preparing to unpack .../03-libva-x11-2_2.7.0-2_amd64.deb ... 2021-05-17T16:33:56.0299306Z Unpacking libva-x11-2:amd64 (2.7.0-2) ... 2021-05-17T16:33:56.0603158Z Selecting previously unselected package libvdpau1:amd64. 2021-05-17T16:33:56.0821006Z Preparing to unpack .../04-libvdpau1_1.3-1ubuntu2_amd64.deb ... 2021-05-17T16:33:56.0836628Z Unpacking libvdpau1:amd64 (1.3-1ubuntu2) ... 2021-05-17T16:33:56.1204233Z Selecting previously unselected package ocl-icd-libopencl1:amd64. 2021-05-17T16:33:56.1463124Z Preparing to unpack .../05-ocl-icd-libopencl1_2.2.11-1ubuntu1_amd64.deb ... 2021-05-17T16:33:56.1474694Z Unpacking ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... 2021-05-17T16:33:56.1843041Z Selecting previously unselected package libavutil56:amd64. 2021-05-17T16:33:56.2052121Z Preparing to unpack .../06-libavutil56_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-05-17T16:33:56.2069236Z Unpacking libavutil56:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T16:33:56.2558152Z Selecting previously unselected package libcodec2-0.9:amd64. 2021-05-17T16:33:56.2803575Z Preparing to unpack .../07-libcodec2-0.9_0.9.2-2_amd64.deb ... 2021-05-17T16:33:56.2815364Z Unpacking libcodec2-0.9:amd64 (0.9.2-2) ... 2021-05-17T16:33:56.9564200Z Selecting previously unselected package libgsm1:amd64. 2021-05-17T16:33:56.9796053Z Preparing to unpack .../08-libgsm1_1.0.18-2_amd64.deb ... 2021-05-17T16:33:56.9808609Z Unpacking libgsm1:amd64 (1.0.18-2) ... 2021-05-17T16:33:57.0162887Z Selecting previously unselected package libmp3lame0:amd64. 2021-05-17T16:33:57.0386343Z Preparing to unpack .../09-libmp3lame0_3.100-3_amd64.deb ... 2021-05-17T16:33:57.0398359Z Unpacking libmp3lame0:amd64 (3.100-3) ... 2021-05-17T16:33:57.0803479Z Selecting previously unselected package libopus0:amd64. 2021-05-17T16:33:57.1060823Z Preparing to unpack .../10-libopus0_1.3.1-0ubuntu1_amd64.deb ... 2021-05-17T16:33:57.1073393Z Unpacking libopus0:amd64 (1.3.1-0ubuntu1) ... 2021-05-17T16:33:57.1523346Z Selecting previously unselected package libshine3:amd64. 2021-05-17T16:33:57.1770927Z Preparing to unpack .../11-libshine3_3.1.1-2_amd64.deb ... 2021-05-17T16:33:57.1786536Z Unpacking libshine3:amd64 (3.1.1-2) ... 2021-05-17T16:33:57.2041145Z Selecting previously unselected package libsnappy1v5:amd64. 2021-05-17T16:33:57.2344153Z Preparing to unpack .../12-libsnappy1v5_1.1.8-1build1_amd64.deb ... 2021-05-17T16:33:57.2355054Z Unpacking libsnappy1v5:amd64 (1.1.8-1build1) ... 2021-05-17T16:33:57.2592388Z Selecting previously unselected package libspeex1:amd64. 2021-05-17T16:33:57.2867636Z Preparing to unpack .../13-libspeex1_1.2~rc1.2-1.1ubuntu1_amd64.deb ... 2021-05-17T16:33:57.2882973Z Unpacking libspeex1:amd64 (1.2~rc1.2-1.1ubuntu1) ... 2021-05-17T16:33:57.3163100Z Selecting previously unselected package libsoxr0:amd64. 2021-05-17T16:33:57.3457582Z Preparing to unpack .../14-libsoxr0_0.1.3-2build1_amd64.deb ... 2021-05-17T16:33:57.3470701Z Unpacking libsoxr0:amd64 (0.1.3-2build1) ... 2021-05-17T16:33:57.3811607Z Selecting previously unselected package libswresample3:amd64. 2021-05-17T16:33:57.4095944Z Preparing to unpack .../15-libswresample3_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-05-17T16:33:57.4107003Z Unpacking libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T16:33:57.4411053Z Selecting previously unselected package libtheora0:amd64. 2021-05-17T16:33:57.4663453Z Preparing to unpack .../16-libtheora0_1.1.1+dfsg.1-15ubuntu2_amd64.deb ... 2021-05-17T16:33:57.4674424Z Unpacking libtheora0:amd64 (1.1.1+dfsg.1-15ubuntu2) ... 2021-05-17T16:33:57.5163808Z Selecting previously unselected package libtwolame0:amd64. 2021-05-17T16:33:57.5355765Z Preparing to unpack .../17-libtwolame0_0.4.0-2_amd64.deb ... 2021-05-17T16:33:57.5367372Z Unpacking libtwolame0:amd64 (0.4.0-2) ... 2021-05-17T16:33:57.5723592Z Selecting previously unselected package libvorbisenc2:amd64. 2021-05-17T16:33:57.5972043Z Preparing to unpack .../18-libvorbisenc2_1.3.6-2ubuntu1_amd64.deb ... 2021-05-17T16:33:57.5985707Z Unpacking libvorbisenc2:amd64 (1.3.6-2ubuntu1) ... 2021-05-17T16:33:57.6403226Z Selecting previously unselected package libwavpack1:amd64. 2021-05-17T16:33:57.6623658Z Preparing to unpack .../19-libwavpack1_5.2.0-1ubuntu0.1_amd64.deb ... 2021-05-17T16:33:57.6642484Z Unpacking libwavpack1:amd64 (5.2.0-1ubuntu0.1) ... 2021-05-17T16:33:57.6966879Z Selecting previously unselected package libx264-155:amd64. 2021-05-17T16:33:57.7245295Z Preparing to unpack .../20-libx264-155_2%3a0.155.2917+git0a84d98-2_amd64.deb ... 2021-05-17T16:33:57.7260294Z Unpacking libx264-155:amd64 (2:0.155.2917+git0a84d98-2) ... 2021-05-17T16:33:57.8006288Z Selecting previously unselected package libx265-179:amd64. 2021-05-17T16:33:57.8284292Z Preparing to unpack .../21-libx265-179_3.2.1-1build1_amd64.deb ... 2021-05-17T16:33:57.8299863Z Unpacking libx265-179:amd64 (3.2.1-1build1) ... 2021-05-17T16:33:58.0083296Z Selecting previously unselected package libxvidcore4:amd64. 2021-05-17T16:33:58.0299350Z Preparing to unpack .../22-libxvidcore4_2%3a1.3.7-1_amd64.deb ... 2021-05-17T16:33:58.0312717Z Unpacking libxvidcore4:amd64 (2:1.3.7-1) ... 2021-05-17T16:33:58.0763384Z Selecting previously unselected package libzvbi-common. 2021-05-17T16:33:58.1000422Z Preparing to unpack .../23-libzvbi-common_0.2.35-17_all.deb ... 2021-05-17T16:33:58.1011269Z Unpacking libzvbi-common (0.2.35-17) ... 2021-05-17T16:33:58.1290426Z Selecting previously unselected package libzvbi0:amd64. 2021-05-17T16:33:58.1574532Z Preparing to unpack .../24-libzvbi0_0.2.35-17_amd64.deb ... 2021-05-17T16:33:58.1589112Z Unpacking libzvbi0:amd64 (0.2.35-17) ... 2021-05-17T16:33:58.2081266Z Selecting previously unselected package libavcodec58:amd64. 2021-05-17T16:33:58.2364186Z Preparing to unpack .../25-libavcodec58_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-05-17T16:33:58.2377692Z Unpacking libavcodec58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T16:33:58.7124161Z Selecting previously unselected package libraw1394-11:amd64. 2021-05-17T16:33:58.7388441Z Preparing to unpack .../26-libraw1394-11_2.1.2-1_amd64.deb ... 2021-05-17T16:33:58.7402980Z Unpacking libraw1394-11:amd64 (2.1.2-1) ... 2021-05-17T16:33:58.7769790Z Selecting previously unselected package libavc1394-0:amd64. 2021-05-17T16:33:58.8019633Z Preparing to unpack .../27-libavc1394-0_0.5.4-5_amd64.deb ... 2021-05-17T16:33:58.8032421Z Unpacking libavc1394-0:amd64 (0.5.4-5) ... 2021-05-17T16:33:58.8306312Z Selecting previously unselected package libass9:amd64. 2021-05-17T16:33:58.8563342Z Preparing to unpack .../28-libass9_1%3a0.14.0-2_amd64.deb ... 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2021-05-17T16:34:04.2936556Z Setting up libmp3lame0:amd64 (3.100-3) ... 2021-05-17T16:34:04.2965945Z Setting up i965-va-driver:amd64 (2.4.0-0ubuntu1) ... 2021-05-17T16:34:04.2996333Z Setting up libvorbisenc2:amd64 (1.3.6-2ubuntu1) ... 2021-05-17T16:34:04.3034627Z Setting up libiec61883-0:amd64 (1.2.0-3) ... 2021-05-17T16:34:04.3062762Z Setting up libserd-0-0:amd64 (0.30.2-1) ... 2021-05-17T16:34:04.3100949Z Setting up libavc1394-0:amd64 (0.5.4-5) ... 2021-05-17T16:34:04.3133075Z Setting up mesa-vdpau-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-17T16:34:04.3167869Z Setting up libzvbi0:amd64 (0.2.35-17) ... 2021-05-17T16:34:04.3202901Z Setting up libcdio-cdda2:amd64 (10.2+2.0.0-1) ... 2021-05-17T16:34:04.3234067Z Setting up libcdio-paranoia2:amd64 (10.2+2.0.0-1) ... 2021-05-17T16:34:04.3263532Z Setting up libopenal1:amd64 (1:1.19.1-1) ... 2021-05-17T16:34:04.3297882Z Setting up libavutil56:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T16:34:04.3328139Z Setting up va-driver-all:amd64 (2.7.0-2) ... 2021-05-17T16:34:04.3362318Z Setting up libpostproc55:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T16:34:04.3402385Z Setting up librubberband2:amd64 (1.8.2-1build1) ... 2021-05-17T16:34:04.3434669Z Setting up libjack-jackd2-0:amd64 (1.9.12~dfsg-2ubuntu2) ... 2021-05-17T16:34:04.3475315Z Setting up vdpau-driver-all:amd64 (1.3-1ubuntu2) ... 2021-05-17T16:34:04.3521400Z Setting up libsord-0-0:amd64 (0.16.4-1) ... 2021-05-17T16:34:04.3554675Z Setting up libsratom-0-0:amd64 (0.6.4-1) ... 2021-05-17T16:34:04.3593262Z Setting up libswscale5:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T16:34:04.3627605Z Setting up libsndfile1:amd64 (1.0.28-7) ... 2021-05-17T16:34:04.3657383Z Setting up liblilv-0-0:amd64 (0.24.6-1ubuntu0.1) ... 2021-05-17T16:34:04.3689307Z Setting up libpulse0:amd64 (1:13.99.1-1ubuntu3.10) ... 2021-05-17T16:34:04.3805326Z Setting up libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T16:34:04.3836970Z Setting up libavresample4:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T16:34:04.3868842Z Setting up libavcodec58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T16:34:04.3902820Z Setting up libsdl2-2.0-0:amd64 (2.0.10+dfsg1-3) ... 2021-05-17T16:34:04.3937737Z Setting up libchromaprint1:amd64 (1.4.3-3build1) ... 2021-05-17T16:34:04.3975675Z Setting up libavformat58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T16:34:04.4021051Z Setting up libavfilter7:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T16:34:04.4057126Z Setting up libavdevice58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T16:34:04.4095384Z Setting up ffmpeg (7:4.2.4-1ubuntu0.1) ... 2021-05-17T16:34:04.4185144Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:34:05.3986052Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:34:07.4007662Z Reading package lists... 2021-05-17T16:34:07.5263464Z Building dependency tree... 2021-05-17T16:34:07.5283302Z Reading state information... 2021-05-17T16:34:07.6763243Z The following additional packages will be installed: 2021-05-17T16:34:07.6766385Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-05-17T16:34:07.7237956Z The following NEW packages will be installed: 2021-05-17T16:34:07.7239856Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-05-17T16:34:07.7241584Z libmagick++-dev 2021-05-17T16:34:07.7430690Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:34:07.7431972Z Need to get 309 kB of archives. 2021-05-17T16:34:07.7433391Z After this operation, 2202 kB of additional disk space will be used. 2021-05-17T16:34:07.7436065Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6-headers all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [47.5 kB] 2021-05-17T16:34:07.7462083Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-8 amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [133 kB] 2021-05-17T16:34:07.7489708Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-dev amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [127 kB] 2021-05-17T16:34:07.7512821Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-dev all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [1404 B] 2021-05-17T16:34:08.1543274Z Fetched 309 kB in 0s (13.5 MB/s) 2021-05-17T16:34:08.1871941Z Selecting previously unselected package libmagick++-6-headers. 2021-05-17T16:34:08.1944958Z (Reading database ... 2021-05-17T16:34:08.1945904Z (Reading database ... 5% 2021-05-17T16:34:08.1946941Z (Reading database ... 10% 2021-05-17T16:34:08.1947793Z (Reading database ... 15% 2021-05-17T16:34:08.1948250Z (Reading database ... 20% 2021-05-17T16:34:08.1948717Z (Reading database ... 25% 2021-05-17T16:34:08.1949169Z (Reading database ... 30% 2021-05-17T16:34:08.1949601Z (Reading database ... 35% 2021-05-17T16:34:08.1950044Z (Reading database ... 40% 2021-05-17T16:34:08.1950482Z (Reading database ... 45% 2021-05-17T16:34:08.1951236Z (Reading database ... 50% 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Preparing to unpack .../libmagick++-6.q16-8_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-05-17T16:34:08.3946544Z Unpacking libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-17T16:34:08.4364274Z Selecting previously unselected package libmagick++-6.q16-dev:amd64. 2021-05-17T16:34:08.4572987Z Preparing to unpack .../libmagick++-6.q16-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-05-17T16:34:08.4588868Z Unpacking libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-17T16:34:08.5204006Z Selecting previously unselected package libmagick++-dev. 2021-05-17T16:34:08.5429012Z Preparing to unpack .../libmagick++-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_all.deb ... 2021-05-17T16:34:08.5521992Z Unpacking libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-17T16:34:08.6105987Z Setting up libmagick++-6-headers (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-17T16:34:08.6193519Z Setting up libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-17T16:34:08.6226092Z Setting up libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-17T16:34:08.6259271Z Setting up libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-17T16:34:08.6345830Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:34:10.6033484Z Reading package lists... 2021-05-17T16:34:10.7291319Z Building dependency tree... 2021-05-17T16:34:10.7311119Z Reading state information... 2021-05-17T16:34:10.8686638Z imagemagick is already the newest version (8:6.9.10.23+dfsg-2.1ubuntu11.2). 2021-05-17T16:34:10.8690078Z The following additional packages will be installed: 2021-05-17T16:34:10.8691265Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 libgs9 libgs9-common 2021-05-17T16:34:10.8692113Z libijs-0.35 libjbig2dec0 2021-05-17T16:34:10.8695070Z Suggested packages: 2021-05-17T16:34:10.8696417Z fonts-noto fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre 2021-05-17T16:34:10.8697196Z ghostscript-x 2021-05-17T16:34:10.9141390Z The following NEW packages will be installed: 2021-05-17T16:34:10.9143487Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 ghostscript libgs9 2021-05-17T16:34:10.9145178Z libgs9-common libijs-0.35 libjbig2dec0 2021-05-17T16:34:10.9431108Z 0 upgraded, 8 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:34:10.9432278Z Need to get 11.2 MB of archives. 2021-05-17T16:34:10.9432902Z After this operation, 39.1 MB of additional disk space will be used. 2021-05-17T16:34:10.9434836Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-droid-fallback all 1:6.0.1r16-1.1 [1805 kB] 2021-05-17T16:34:10.9789203Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 fonts-noto-mono all 20200323-1build1~ubuntu20.04.1 [80.6 kB] 2021-05-17T16:34:10.9803914Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-urw-base35 all 20170801.1-3 [6333 kB] 2021-05-17T16:34:11.0634828Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9-common all 9.50~dfsg-5ubuntu4.2 [681 kB] 2021-05-17T16:34:11.0759728Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libijs-0.35 amd64 0.35-15 [15.7 kB] 2021-05-17T16:34:11.0765868Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjbig2dec0 amd64 0.18-1ubuntu1 [60.0 kB] 2021-05-17T16:34:11.0775124Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9 amd64 9.50~dfsg-5ubuntu4.2 [2172 kB] 2021-05-17T16:34:11.1026804Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 ghostscript amd64 9.50~dfsg-5ubuntu4.2 [51.6 kB] 2021-05-17T16:34:11.5093439Z Fetched 11.2 MB in 0s (60.8 MB/s) 2021-05-17T16:34:11.5440436Z Selecting previously unselected package fonts-droid-fallback. 2021-05-17T16:34:11.5510349Z (Reading database ... 2021-05-17T16:34:11.5511705Z (Reading database ... 5% 2021-05-17T16:34:11.5512421Z (Reading 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... 100% 2021-05-17T16:34:11.6558508Z (Reading database ... 267393 files and directories currently installed.) 2021-05-17T16:34:11.6687897Z Preparing to unpack .../0-fonts-droid-fallback_1%3a6.0.1r16-1.1_all.deb ... 2021-05-17T16:34:11.6929029Z Unpacking fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-05-17T16:34:11.9004248Z Selecting previously unselected package fonts-noto-mono. 2021-05-17T16:34:11.9208495Z Preparing to unpack .../1-fonts-noto-mono_20200323-1build1~ubuntu20.04.1_all.deb ... 2021-05-17T16:34:11.9224520Z Unpacking fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-05-17T16:34:11.9604167Z Selecting previously unselected package fonts-urw-base35. 2021-05-17T16:34:11.9848323Z Preparing to unpack .../2-fonts-urw-base35_20170801.1-3_all.deb ... 2021-05-17T16:34:12.0456448Z Unpacking fonts-urw-base35 (20170801.1-3) ... 2021-05-17T16:34:12.4223384Z Selecting previously unselected package libgs9-common. 2021-05-17T16:34:12.4491706Z Preparing to unpack .../3-libgs9-common_9.50~dfsg-5ubuntu4.2_all.deb ... 2021-05-17T16:34:12.4499505Z Unpacking libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-05-17T16:34:12.5527099Z Selecting previously unselected package libijs-0.35:amd64. 2021-05-17T16:34:12.5816903Z Preparing to unpack .../4-libijs-0.35_0.35-15_amd64.deb ... 2021-05-17T16:34:12.5844953Z Unpacking libijs-0.35:amd64 (0.35-15) ... 2021-05-17T16:34:12.6163247Z Selecting previously unselected package libjbig2dec0:amd64. 2021-05-17T16:34:12.6391957Z Preparing to unpack .../5-libjbig2dec0_0.18-1ubuntu1_amd64.deb ... 2021-05-17T16:34:12.6403222Z Unpacking libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-05-17T16:34:12.6732873Z Selecting previously unselected package libgs9:amd64. 2021-05-17T16:34:12.6995247Z Preparing to unpack .../6-libgs9_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-05-17T16:34:12.7008644Z Unpacking libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-05-17T16:34:12.9525459Z Selecting previously unselected package ghostscript. 2021-05-17T16:34:12.9814900Z Preparing to unpack .../7-ghostscript_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-05-17T16:34:12.9823614Z Unpacking ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-05-17T16:34:13.0505944Z Setting up fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-05-17T16:34:13.0551324Z Setting up libijs-0.35:amd64 (0.35-15) ... 2021-05-17T16:34:13.0591890Z Setting up fonts-urw-base35 (20170801.1-3) ... 2021-05-17T16:34:13.1250457Z Setting up libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-05-17T16:34:13.1286907Z Setting up fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-05-17T16:34:13.1567087Z Setting up libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-05-17T16:34:13.1600763Z Setting up libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-05-17T16:34:13.1636532Z Setting up ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-05-17T16:34:13.1754570Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-17T16:34:13.2930764Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:34:13.3157634Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:34:16.2707625Z Reading package lists... 2021-05-17T16:34:16.4147088Z Building dependency tree... 2021-05-17T16:34:16.4167907Z Reading state information... 2021-05-17T16:34:16.5514079Z The following additional packages will be installed: 2021-05-17T16:34:16.5517842Z libudunits2-0 libudunits2-data 2021-05-17T16:34:16.5948149Z The following NEW packages will be installed: 2021-05-17T16:34:16.5953614Z libudunits2-0 libudunits2-data libudunits2-dev 2021-05-17T16:34:16.6150697Z 0 upgraded, 3 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:34:16.6152842Z Need to get 429 kB of archives. 2021-05-17T16:34:16.6153870Z After this operation, 1026 kB of additional disk space will be used. 2021-05-17T16:34:16.6156055Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-data all 2.2.26-5 [18.8 kB] 2021-05-17T16:34:16.6173040Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-0 amd64 2.2.26-5 [48.9 kB] 2021-05-17T16:34:16.6190538Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-dev amd64 2.2.26-5 [362 kB] 2021-05-17T16:34:17.0272956Z Fetched 429 kB in 0s (17.1 MB/s) 2021-05-17T16:34:17.0562106Z Selecting previously unselected package libudunits2-data. 2021-05-17T16:34:17.0640081Z (Reading database ... 2021-05-17T16:34:17.0641049Z (Reading database ... 5% 2021-05-17T16:34:17.0641699Z (Reading database ... 10% 2021-05-17T16:34:17.0643569Z (Reading database ... 15% 2021-05-17T16:34:17.0644235Z (Reading database ... 20% 2021-05-17T16:34:17.0644856Z (Reading database ... 25% 2021-05-17T16:34:17.0645492Z (Reading database ... 30% 2021-05-17T16:34:17.0646626Z (Reading database ... 35% 2021-05-17T16:34:17.0647205Z (Reading database ... 40% 2021-05-17T16:34:17.0647920Z (Reading database ... 45% 2021-05-17T16:34:17.0648578Z (Reading database ... 50% 2021-05-17T16:34:17.0667965Z (Reading database ... 55% 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(2.2.26-5) ... 2021-05-17T16:34:17.6815132Z Selecting previously unselected package libudunits2-dev:amd64. 2021-05-17T16:34:17.6816487Z Preparing to unpack .../libudunits2-dev_2.2.26-5_amd64.deb ... 2021-05-17T16:34:17.6817882Z Unpacking libudunits2-dev:amd64 (2.2.26-5) ... 2021-05-17T16:34:17.6818859Z Setting up libudunits2-data (2.2.26-5) ... 2021-05-17T16:34:17.6820032Z Setting up libudunits2-0:amd64 (2.2.26-5) ... 2021-05-17T16:34:17.6821018Z Setting up libudunits2-dev:amd64 (2.2.26-5) ... 2021-05-17T16:34:17.6822244Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-17T16:34:17.6823689Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:34:19.5126064Z Reading package lists... 2021-05-17T16:34:19.6636818Z Building dependency tree... 2021-05-17T16:34:19.6656988Z Reading state information... 2021-05-17T16:34:19.8507865Z The following NEW packages will be installed: 2021-05-17T16:34:19.8514478Z libjq-dev 2021-05-17T16:34:19.8703399Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:34:19.8704162Z Need to get 11.2 kB of archives. 2021-05-17T16:34:19.8705090Z After this operation, 47.1 kB of additional disk space will be used. 2021-05-17T16:34:19.8706958Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libjq-dev amd64 1.6-1ubuntu0.20.04.1 [11.2 kB] 2021-05-17T16:34:20.2682556Z Fetched 11.2 kB in 0s (754 kB/s) 2021-05-17T16:34:20.2964004Z Selecting previously unselected package libjq-dev:amd64. 2021-05-17T16:34:20.3035779Z (Reading database ... 2021-05-17T16:34:20.3036673Z (Reading database ... 5% 2021-05-17T16:34:20.3037924Z (Reading database ... 10% 2021-05-17T16:34:20.3038879Z (Reading database ... 15% 2021-05-17T16:34:20.3039521Z (Reading database ... 20% 2021-05-17T16:34:20.3040159Z (Reading database ... 25% 2021-05-17T16:34:20.3040779Z (Reading database ... 30% 2021-05-17T16:34:20.3041559Z (Reading database ... 35% 2021-05-17T16:34:20.3044092Z (Reading database ... 40% 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(1.6-1ubuntu0.20.04.1) ... 2021-05-17T16:34:22.4905778Z Reading package lists... 2021-05-17T16:34:22.6452937Z Building dependency tree... 2021-05-17T16:34:22.6479758Z Reading state information... 2021-05-17T16:34:22.8299864Z The following NEW packages will be installed: 2021-05-17T16:34:22.8301957Z libmng2 2021-05-17T16:34:22.8476520Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:34:22.8477370Z Need to get 168 kB of archives. 2021-05-17T16:34:22.8478409Z After this operation, 571 kB of additional disk space will be used. 2021-05-17T16:34:22.8480432Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmng2 amd64 2.0.3+dfsg-3 [168 kB] 2021-05-17T16:34:23.2486803Z Fetched 168 kB in 0s (8750 kB/s) 2021-05-17T16:34:23.2793462Z Selecting previously unselected package libmng2:amd64. 2021-05-17T16:34:23.2868945Z (Reading database ... 2021-05-17T16:34:23.2869550Z (Reading database ... 5% 2021-05-17T16:34:23.2869974Z (Reading database ... 10% 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2021-05-17T16:34:23.3893176Z (Reading database ... 267992 files and directories currently installed.) 2021-05-17T16:34:23.4012830Z Preparing to unpack .../libmng2_2.0.3+dfsg-3_amd64.deb ... 2021-05-17T16:34:23.4038132Z Unpacking libmng2:amd64 (2.0.3+dfsg-3) ... 2021-05-17T16:34:23.4728647Z Setting up libmng2:amd64 (2.0.3+dfsg-3) ... 2021-05-17T16:34:23.4767822Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:34:25.4570730Z Reading package lists... 2021-05-17T16:34:25.5879694Z Building dependency tree... 2021-05-17T16:34:25.5902187Z Reading state information... 2021-05-17T16:34:25.7379336Z E: Unable to locate package libmng1 2021-05-17T16:34:25.8014839Z Reading package lists... 2021-05-17T16:34:25.9368146Z Building dependency tree... 2021-05-17T16:34:25.9389119Z Reading state information... 2021-05-17T16:34:26.0520279Z E: Unable to locate package libapparmor-devel 2021-05-17T16:34:26.1199835Z Reading package lists... 2021-05-17T16:34:26.2615099Z Building dependency tree... 2021-05-17T16:34:26.2633551Z Reading state information... 2021-05-17T16:34:26.4080333Z The following additional packages will be installed: 2021-05-17T16:34:26.4083203Z libij-java 2021-05-17T16:34:26.4497532Z The following NEW packages will be installed: 2021-05-17T16:34:26.4503216Z imagej libij-java 2021-05-17T16:34:26.4697901Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:34:26.4699163Z Need to get 2328 kB of archives. 2021-05-17T16:34:26.4700303Z After this operation, 2498 kB of additional disk space will be used. 2021-05-17T16:34:26.4702058Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libij-java all 1.52r-1 [2284 kB] 2021-05-17T16:34:26.5033174Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 imagej all 1.52r-1 [43.7 kB] 2021-05-17T16:34:26.9014772Z Fetched 2328 kB in 0s (47.2 MB/s) 2021-05-17T16:34:26.9324443Z Selecting previously unselected package libij-java. 2021-05-17T16:34:26.9386409Z (Reading 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90% 2021-05-17T16:34:27.0439391Z (Reading database ... 95% 2021-05-17T16:34:27.0439890Z (Reading database ... 100% 2021-05-17T16:34:27.0440728Z (Reading database ... 267998 files and directories currently installed.) 2021-05-17T16:34:27.0567464Z Preparing to unpack .../libij-java_1.52r-1_all.deb ... 2021-05-17T16:34:27.0584571Z Unpacking libij-java (1.52r-1) ... 2021-05-17T16:34:27.1403903Z Selecting previously unselected package imagej. 2021-05-17T16:34:27.1669415Z Preparing to unpack .../imagej_1.52r-1_all.deb ... 2021-05-17T16:34:27.1685015Z Unpacking imagej (1.52r-1) ... 2021-05-17T16:34:27.2470312Z Setting up libij-java (1.52r-1) ... 2021-05-17T16:34:27.2511185Z Setting up imagej (1.52r-1) ... 2021-05-17T16:34:27.2547480Z Processing triggers for hicolor-icon-theme (0.17-2) ... 2021-05-17T16:34:28.4607014Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:34:29.1385196Z Processing triggers for mime-support (3.64ubuntu1) ... 2021-05-17T16:34:31.1960316Z Reading package lists... 2021-05-17T16:34:31.3301354Z Building dependency tree... 2021-05-17T16:34:31.3320855Z Reading state information... 2021-05-17T16:34:31.4794007Z Suggested packages: 2021-05-17T16:34:31.4795469Z bowtie2-examples 2021-05-17T16:34:31.5216229Z The following NEW packages will be installed: 2021-05-17T16:34:31.5223632Z bowtie2 2021-05-17T16:34:31.5391804Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:34:31.5392558Z Need to get 1324 kB of archives. 2021-05-17T16:34:31.5393209Z After this operation, 5630 kB of additional disk space will be used. 2021-05-17T16:34:31.5395046Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 bowtie2 amd64 2.3.5.1-6build1 [1324 kB] 2021-05-17T16:34:31.9477843Z Fetched 1324 kB in 0s (40.6 MB/s) 2021-05-17T16:34:31.9759583Z Selecting previously unselected package bowtie2. 2021-05-17T16:34:31.9835725Z (Reading database ... 2021-05-17T16:34:31.9836538Z (Reading database ... 5% 2021-05-17T16:34:31.9837209Z (Reading database ... 10% 2021-05-17T16:34:31.9838045Z (Reading database ... 15% 2021-05-17T16:34:31.9838923Z (Reading database ... 20% 2021-05-17T16:34:31.9839545Z (Reading database ... 25% 2021-05-17T16:34:31.9840165Z (Reading database ... 30% 2021-05-17T16:34:31.9840781Z (Reading database ... 35% 2021-05-17T16:34:31.9841571Z (Reading database ... 40% 2021-05-17T16:34:31.9842641Z (Reading database ... 45% 2021-05-17T16:34:31.9843074Z (Reading database ... 50% 2021-05-17T16:34:31.9865632Z (Reading database ... 55% 2021-05-17T16:34:31.9912184Z (Reading database ... 60% 2021-05-17T16:34:31.9938508Z (Reading database ... 65% 2021-05-17T16:34:32.0055182Z (Reading database ... 70% 2021-05-17T16:34:32.0171859Z (Reading database ... 75% 2021-05-17T16:34:32.0193566Z (Reading database ... 80% 2021-05-17T16:34:32.0711095Z (Reading database ... 85% 2021-05-17T16:34:32.0865249Z (Reading database ... 90% 2021-05-17T16:34:32.0936104Z (Reading database ... 95% 2021-05-17T16:34:32.0939092Z (Reading database ... 100% 2021-05-17T16:34:32.0940696Z (Reading database ... 268021 files and directories currently installed.) 2021-05-17T16:34:32.1080144Z Preparing to unpack .../bowtie2_2.3.5.1-6build1_amd64.deb ... 2021-05-17T16:34:32.1096092Z Unpacking bowtie2 (2.3.5.1-6build1) ... 2021-05-17T16:34:32.2925133Z Setting up bowtie2 (2.3.5.1-6build1) ... 2021-05-17T16:34:32.2963352Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:34:35.1366682Z Reading package lists... 2021-05-17T16:34:35.2642847Z Building dependency tree... 2021-05-17T16:34:35.2663041Z Reading state information... 2021-05-17T16:34:35.4131665Z E: Unable to locate package install 2021-05-17T16:34:35.4132641Z E: Unable to locate package gdal 2021-05-17T16:34:35.4761496Z Reading package lists... 2021-05-17T16:34:35.6163169Z Building dependency tree... 2021-05-17T16:34:35.6181785Z Reading state information... 2021-05-17T16:34:35.6392697Z Package insighttoolkit4-python is not available, but is referred to by another package. 2021-05-17T16:34:35.6394098Z This may mean that the package is missing, has been obsoleted, or 2021-05-17T16:34:35.6395646Z is only available from another source 2021-05-17T16:34:35.6396125Z 2021-05-17T16:34:36.1838213Z E: Package 'insighttoolkit4-python' has no installation candidate 2021-05-17T16:34:36.1839561Z Reading package lists... 2021-05-17T16:34:36.1841150Z E: Package 'libav-tools' has no installation candidate 2021-05-17T16:34:36.1842694Z Building dependency tree... 2021-05-17T16:34:36.1844821Z Reading state information... 2021-05-17T16:34:36.1846162Z Package libav-tools is not available, but is referred to by another package. 2021-05-17T16:34:36.1847047Z This may mean that the package is missing, has been obsoleted, or 2021-05-17T16:34:36.1847716Z is only available from another source 2021-05-17T16:34:36.1848332Z However the following packages replace it: 2021-05-17T16:34:36.1848803Z ffmpeg 2021-05-17T16:34:36.1849037Z 2021-05-17T16:34:36.1849748Z Reading package lists... 2021-05-17T16:34:36.2845052Z Building dependency tree... 2021-05-17T16:34:36.2865892Z Reading state information... 2021-05-17T16:34:36.4356930Z The following additional packages will be installed: 2021-05-17T16:34:36.4359241Z libgcrypt20-dev libgit2-28 libgpg-error-dev libhttp-parser-dev 2021-05-17T16:34:36.4360698Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-05-17T16:34:36.4362105Z libssh2-1-dev 2021-05-17T16:34:36.4363916Z Suggested packages: 2021-05-17T16:34:36.4364776Z libgcrypt20-doc libmbedtls-doc 2021-05-17T16:34:36.4816380Z The following NEW packages will be installed: 2021-05-17T16:34:36.4818391Z libgcrypt20-dev libgit2-28 libgit2-dev libgpg-error-dev libhttp-parser-dev 2021-05-17T16:34:36.4820113Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-05-17T16:34:36.4821762Z libssh2-1-dev 2021-05-17T16:34:36.5012072Z 0 upgraded, 11 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:34:36.5012936Z Need to get 2667 kB of archives. 2021-05-17T16:34:36.5013615Z After this operation, 11.2 MB of additional disk space will be used. 2021-05-17T16:34:36.5015656Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgpg-error-dev amd64 1.37-1 [109 kB] 2021-05-17T16:34:36.5068321Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcrypt20-dev amd64 1.8.5-5ubuntu1 [470 kB] 2021-05-17T16:34:36.5156360Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser2.9 amd64 2.9.2-2 [21.8 kB] 2021-05-17T16:34:36.5164001Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedcrypto3 amd64 2.16.4-1ubuntu2 [150 kB] 2021-05-17T16:34:36.5188222Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedx509-0 amd64 2.16.4-1ubuntu2 [42.3 kB] 2021-05-17T16:34:36.5197773Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls12 amd64 2.16.4-1ubuntu2 [71.8 kB] 2021-05-17T16:34:36.5209394Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-28 amd64 0.28.4+dfsg.1-2 [403 kB] 2021-05-17T16:34:36.5265270Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls-dev amd64 2.16.4-1ubuntu2 [444 kB] 2021-05-17T16:34:36.5329279Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libssh2-1-dev amd64 1.8.0-2.1build1 [244 kB] 2021-05-17T16:34:36.5367858Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser-dev amd64 2.9.2-2 [20.2 kB] 2021-05-17T16:34:36.5375148Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-dev amd64 0.28.4+dfsg.1-2 [691 kB] 2021-05-17T16:34:36.9614324Z Fetched 2667 kB in 0s (44.1 MB/s) 2021-05-17T16:34:36.9894359Z Selecting previously unselected package libgpg-error-dev. 2021-05-17T16:34:36.9968417Z (Reading database ... 2021-05-17T16:34:36.9969088Z (Reading database ... 5% 2021-05-17T16:34:36.9969910Z (Reading database 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2021-05-17T16:34:37.1017317Z (Reading database ... 268047 files and directories currently installed.) 2021-05-17T16:34:37.1141005Z Preparing to unpack .../00-libgpg-error-dev_1.37-1_amd64.deb ... 2021-05-17T16:34:37.1155041Z Unpacking libgpg-error-dev (1.37-1) ... 2021-05-17T16:34:37.1507723Z Selecting previously unselected package libgcrypt20-dev. 2021-05-17T16:34:37.1784804Z Preparing to unpack .../01-libgcrypt20-dev_1.8.5-5ubuntu1_amd64.deb ... 2021-05-17T16:34:37.1795656Z Unpacking libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-05-17T16:34:37.2614587Z Selecting previously unselected package libhttp-parser2.9:amd64. 2021-05-17T16:34:37.2902172Z Preparing to unpack .../02-libhttp-parser2.9_2.9.2-2_amd64.deb ... 2021-05-17T16:34:37.2924006Z Unpacking libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-05-17T16:34:37.3203878Z Selecting previously unselected package libmbedcrypto3:amd64. 2021-05-17T16:34:37.3499218Z Preparing to unpack .../03-libmbedcrypto3_2.16.4-1ubuntu2_amd64.deb ... 2021-05-17T16:34:37.3513913Z Unpacking libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-05-17T16:34:37.3963820Z Selecting previously unselected package libmbedx509-0:amd64. 2021-05-17T16:34:37.4207590Z Preparing to unpack .../04-libmbedx509-0_2.16.4-1ubuntu2_amd64.deb ... 2021-05-17T16:34:37.4219565Z Unpacking libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-05-17T16:34:37.4603006Z Selecting previously unselected package libmbedtls12:amd64. 2021-05-17T16:34:37.4813880Z Preparing to unpack .../05-libmbedtls12_2.16.4-1ubuntu2_amd64.deb ... 2021-05-17T16:34:37.4830037Z Unpacking libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-05-17T16:34:37.5203516Z Selecting previously unselected package libgit2-28:amd64. 2021-05-17T16:34:37.5444223Z Preparing to unpack .../06-libgit2-28_0.28.4+dfsg.1-2_amd64.deb ... 2021-05-17T16:34:37.5461338Z Unpacking libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-05-17T16:34:37.6084313Z Selecting previously unselected package libmbedtls-dev:amd64. 2021-05-17T16:34:37.6336988Z Preparing to unpack .../07-libmbedtls-dev_2.16.4-1ubuntu2_amd64.deb ... 2021-05-17T16:34:37.6348394Z Unpacking libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-05-17T16:34:37.7123858Z Selecting previously unselected package libssh2-1-dev:amd64. 2021-05-17T16:34:37.7362590Z Preparing to unpack .../08-libssh2-1-dev_1.8.0-2.1build1_amd64.deb ... 2021-05-17T16:34:37.7372171Z Unpacking libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-05-17T16:34:37.8043813Z Selecting previously unselected package libhttp-parser-dev. 2021-05-17T16:34:37.8314436Z Preparing to unpack .../09-libhttp-parser-dev_2.9.2-2_amd64.deb ... 2021-05-17T16:34:37.8324977Z Unpacking libhttp-parser-dev (2.9.2-2) ... 2021-05-17T16:34:37.8644035Z Selecting previously unselected package libgit2-dev:amd64. 2021-05-17T16:34:37.8863440Z Preparing to unpack .../10-libgit2-dev_0.28.4+dfsg.1-2_amd64.deb ... 2021-05-17T16:34:37.8872841Z Unpacking libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-05-17T16:34:38.0099675Z Setting up libgpg-error-dev (1.37-1) ... 2021-05-17T16:34:38.0130905Z Setting up libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-05-17T16:34:38.0169046Z Setting up libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-05-17T16:34:38.0202286Z Setting up libhttp-parser-dev (2.9.2-2) ... 2021-05-17T16:34:38.0229032Z Setting up libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-05-17T16:34:38.0258246Z Setting up libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-05-17T16:34:38.0291636Z Setting up libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-05-17T16:34:38.0323769Z Setting up libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-05-17T16:34:38.0356453Z Setting up libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-05-17T16:34:38.0388357Z Setting up libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-05-17T16:34:38.0425744Z Setting up libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-05-17T16:34:38.0463181Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:34:42.5934343Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-17T16:34:42.7052398Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:34:44.7356509Z Reading package lists... 2021-05-17T16:34:44.8720655Z Building dependency tree... 2021-05-17T16:34:44.8741456Z Reading state information... 2021-05-17T16:34:45.1100189Z libtiff-dev is already the newest version (4.1.0+git191117-2ubuntu0.20.04.1). 2021-05-17T16:34:45.1101623Z libtiff-dev set to manually installed. 2021-05-17T16:34:45.1102572Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:34:45.1741833Z Reading package lists... 2021-05-17T16:34:45.3059488Z Building dependency tree... 2021-05-17T16:34:45.3085155Z Reading state information... 2021-05-17T16:34:45.5191758Z unixodbc-dev is already the newest version (2.3.7). 2021-05-17T16:34:45.5195596Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:34:45.5840867Z Reading package lists... 2021-05-17T16:34:45.7321654Z Building dependency tree... 2021-05-17T16:34:45.7342516Z Reading state information... 2021-05-17T16:34:45.9212970Z The following NEW packages will be installed: 2021-05-17T16:34:45.9214804Z libsodium-dev 2021-05-17T16:34:45.9423787Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:34:45.9424792Z Need to get 169 kB of archives. 2021-05-17T16:34:45.9425511Z After this operation, 826 kB of additional disk space will be used. 2021-05-17T16:34:45.9427082Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsodium-dev amd64 1.0.18-1 [169 kB] 2021-05-17T16:34:46.3379436Z Fetched 169 kB in 0s (8247 kB/s) 2021-05-17T16:34:46.3723831Z Selecting previously unselected package libsodium-dev:amd64. 2021-05-17T16:34:46.3742629Z (Reading database ... 2021-05-17T16:34:46.3743285Z (Reading database ... 5% 2021-05-17T16:34:46.3744036Z (Reading database ... 10% 2021-05-17T16:34:46.3744605Z (Reading database ... 15% 2021-05-17T16:34:46.3745149Z (Reading database ... 20% 2021-05-17T16:34:46.3745826Z (Reading database ... 25% 2021-05-17T16:34:46.3747128Z (Reading database ... 30% 2021-05-17T16:34:46.3747761Z (Reading database ... 35% 2021-05-17T16:34:46.3748668Z (Reading database ... 40% 2021-05-17T16:34:46.3749314Z (Reading database ... 45% 2021-05-17T16:34:46.3750544Z (Reading database ... 50% 2021-05-17T16:34:46.3791094Z (Reading database ... 55% 2021-05-17T16:34:46.3834124Z (Reading database ... 60% 2021-05-17T16:34:46.3860930Z (Reading database ... 65% 2021-05-17T16:34:46.3972401Z (Reading database ... 70% 2021-05-17T16:34:46.4077370Z (Reading database ... 75% 2021-05-17T16:34:46.4100393Z (Reading database ... 80% 2021-05-17T16:34:46.4614125Z (Reading database ... 85% 2021-05-17T16:34:46.4775522Z (Reading database ... 90% 2021-05-17T16:34:46.4855611Z (Reading database ... 95% 2021-05-17T16:34:46.4856140Z (Reading database ... 100% 2021-05-17T16:34:46.4856811Z (Reading database ... 268550 files and directories currently installed.) 2021-05-17T16:34:46.4985271Z Preparing to unpack .../libsodium-dev_1.0.18-1_amd64.deb ... 2021-05-17T16:34:46.5000393Z Unpacking libsodium-dev:amd64 (1.0.18-1) ... 2021-05-17T16:34:46.5809528Z Setting up libsodium-dev:amd64 (1.0.18-1) ... 2021-05-17T16:34:48.6069387Z Reading package lists... 2021-05-17T16:34:48.7476164Z Building dependency tree... 2021-05-17T16:34:48.7498906Z Reading state information... 2021-05-17T16:34:48.9000707Z The following additional packages will be installed: 2021-05-17T16:34:48.9006149Z libarchive-dev liblept5 libtesseract4 tesseract-ocr tesseract-ocr-osd 2021-05-17T16:34:48.9472182Z The following NEW packages will be installed: 2021-05-17T16:34:48.9477718Z libarchive-dev liblept5 libleptonica-dev libtesseract-dev libtesseract4 2021-05-17T16:34:48.9479604Z tesseract-ocr tesseract-ocr-eng tesseract-ocr-osd 2021-05-17T16:34:48.9700398Z 0 upgraded, 8 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:34:48.9702585Z Need to get 10.4 MB of archives. 2021-05-17T16:34:48.9703801Z After this operation, 38.0 MB of additional disk space will be used. 2021-05-17T16:34:48.9705811Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-dev amd64 3.4.0-2ubuntu1 [490 kB] 2021-05-17T16:34:48.9809277Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblept5 amd64 1.79.0-1 [999 kB] 2021-05-17T16:34:48.9939220Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libleptonica-dev amd64 1.79.0-1 [1389 kB] 2021-05-17T16:34:49.0137925Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract4 amd64 4.1.1-2build2 [1237 kB] 2021-05-17T16:34:49.0302088Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract-dev amd64 4.1.1-2build2 [1463 kB] 2021-05-17T16:34:49.0520056Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-eng all 1:4.00~git30-7274cfa-1 [1598 kB] 2021-05-17T16:34:49.0742777Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-osd all 1:4.00~git30-7274cfa-1 [2990 kB] 2021-05-17T16:34:49.1125437Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr amd64 4.1.1-2build2 [262 kB] 2021-05-17T16:34:49.5438416Z Fetched 10.4 MB in 0s (64.4 MB/s) 2021-05-17T16:34:49.5746581Z Selecting previously unselected package libarchive-dev:amd64. 2021-05-17T16:34:49.5822309Z (Reading database ... 2021-05-17T16:34:49.5823134Z (Reading database ... 5% 2021-05-17T16:34:49.5824002Z (Reading database ... 10% 2021-05-17T16:34:49.5824730Z (Reading database ... 15% 2021-05-17T16:34:49.5825582Z (Reading database ... 20% 2021-05-17T16:34:49.5826257Z (Reading database ... 25% 2021-05-17T16:34:49.5827101Z (Reading database ... 30% 2021-05-17T16:34:49.5827755Z (Reading database ... 35% 2021-05-17T16:34:49.5828587Z (Reading database ... 40% 2021-05-17T16:34:49.5829312Z (Reading database ... 45% 2021-05-17T16:34:49.5829995Z (Reading database 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.../1-liblept5_1.79.0-1_amd64.deb ... 2021-05-17T16:34:49.8062624Z Unpacking liblept5:amd64 (1.79.0-1) ... 2021-05-17T16:34:49.9243822Z Selecting previously unselected package libleptonica-dev:amd64. 2021-05-17T16:34:49.9513127Z Preparing to unpack .../2-libleptonica-dev_1.79.0-1_amd64.deb ... 2021-05-17T16:34:49.9525006Z Unpacking libleptonica-dev:amd64 (1.79.0-1) ... 2021-05-17T16:34:50.1123887Z Selecting previously unselected package libtesseract4:amd64. 2021-05-17T16:34:50.1412276Z Preparing to unpack .../3-libtesseract4_4.1.1-2build2_amd64.deb ... 2021-05-17T16:34:50.1422504Z Unpacking libtesseract4:amd64 (4.1.1-2build2) ... 2021-05-17T16:34:50.2883730Z Selecting previously unselected package libtesseract-dev:amd64. 2021-05-17T16:34:50.3182110Z Preparing to unpack .../4-libtesseract-dev_4.1.1-2build2_amd64.deb ... 2021-05-17T16:34:50.3192923Z Unpacking libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-05-17T16:34:50.4923896Z Selecting previously unselected package tesseract-ocr-eng. 2021-05-17T16:34:50.5202661Z Preparing to unpack .../5-tesseract-ocr-eng_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-05-17T16:34:50.5216893Z Unpacking tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-05-17T16:34:50.6924512Z Selecting previously unselected package tesseract-ocr-osd. 2021-05-17T16:34:50.7148182Z Preparing to unpack .../6-tesseract-ocr-osd_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-05-17T16:34:50.7163378Z Unpacking tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-05-17T16:34:51.0484496Z Selecting previously unselected package tesseract-ocr. 2021-05-17T16:34:51.0812129Z Preparing to unpack .../7-tesseract-ocr_4.1.1-2build2_amd64.deb ... 2021-05-17T16:34:51.0829293Z Unpacking tesseract-ocr (4.1.1-2build2) ... 2021-05-17T16:34:51.1725593Z Setting up tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-05-17T16:34:51.1766448Z Setting up liblept5:amd64 (1.79.0-1) ... 2021-05-17T16:34:51.1816665Z Setting up libleptonica-dev:amd64 (1.79.0-1) ... 2021-05-17T16:34:51.1855241Z Setting up libtesseract4:amd64 (4.1.1-2build2) ... 2021-05-17T16:34:51.1894437Z Setting up libarchive-dev:amd64 (3.4.0-2ubuntu1) ... 2021-05-17T16:34:51.1931748Z Setting up tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-05-17T16:34:51.1973893Z Setting up libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-05-17T16:34:51.2006069Z Setting up tesseract-ocr (4.1.1-2build2) ... 2021-05-17T16:34:51.2045608Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:34:54.0478057Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:34:56.0292197Z Reading package lists... 2021-05-17T16:34:56.1798052Z Building dependency tree... 2021-05-17T16:34:56.1820248Z Reading state information... 2021-05-17T16:34:56.3924039Z wget is already the newest version (1.20.3-1ubuntu1). 2021-05-17T16:34:56.3925120Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:34:56.4596602Z Reading package lists... 2021-05-17T16:34:56.6064140Z Building dependency tree... 2021-05-17T16:34:56.6084891Z Reading state information... 2021-05-17T16:34:56.7449782Z The following additional packages will be installed: 2021-05-17T16:34:56.7451981Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-05-17T16:34:56.7453253Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev 2021-05-17T16:34:56.7458271Z Suggested packages: 2021-05-17T16:34:56.7459400Z doc-base krb5-doc krb5-user libnorm-doc 2021-05-17T16:34:56.7975375Z The following NEW packages will be installed: 2021-05-17T16:34:56.7977425Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-05-17T16:34:56.7980052Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev libzmq3-dev 2021-05-17T16:34:56.8175868Z 0 upgraded, 10 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:34:56.8177230Z Need to get 1459 kB of archives. 2021-05-17T16:34:56.8177977Z After this operation, 7754 kB of additional disk space will be used. 2021-05-17T16:34:56.8179741Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgssrpc4 amd64 1.17-6ubuntu4.1 [55.4 kB] 2021-05-17T16:34:56.8215851Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkdb5-9 amd64 1.17-6ubuntu4.1 [37.3 kB] 2021-05-17T16:34:56.8229503Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5srv-mit11 amd64 1.17-6ubuntu4.1 [49.5 kB] 2021-05-17T16:34:56.8239825Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5clnt-mit11 amd64 1.17-6ubuntu4.1 [37.6 kB] 2021-05-17T16:34:56.8250417Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 comerr-dev amd64 2.1-1.45.5-2ubuntu1 [39.9 kB] 2021-05-17T16:34:56.8258636Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 krb5-multidev amd64 1.17-6ubuntu4.1 [120 kB] 2021-05-17T16:34:56.8280994Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnorm-dev amd64 1.5.8+dfsg2-2build1 [463 kB] 2021-05-17T16:34:56.8350010Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpgm-dev amd64 5.2.122~dfsg-3ubuntu1 [189 kB] 2021-05-17T16:34:56.8373641Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkrb5-dev amd64 1.17-6ubuntu4.1 [11.7 kB] 2021-05-17T16:34:56.8382669Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzmq3-dev amd64 4.3.2-2ubuntu1 [455 kB] 2021-05-17T16:34:57.2542455Z Fetched 1459 kB in 0s (35.8 MB/s) 2021-05-17T16:34:57.2838121Z Selecting previously unselected package libgssrpc4:amd64. 2021-05-17T16:34:57.2914378Z (Reading database ... 2021-05-17T16:34:57.2914885Z (Reading database ... 5% 2021-05-17T16:34:57.2915313Z (Reading database ... 10% 2021-05-17T16:34:57.2915719Z (Reading database ... 15% 2021-05-17T16:34:57.2916138Z (Reading database ... 20% 2021-05-17T16:34:57.2916540Z (Reading database ... 25% 2021-05-17T16:34:57.2916970Z (Reading database ... 30% 2021-05-17T16:34:57.2917391Z (Reading database ... 35% 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2021-05-17T16:34:57.4524206Z Selecting previously unselected package libkdb5-9:amd64. 2021-05-17T16:34:57.4743073Z Preparing to unpack .../1-libkdb5-9_1.17-6ubuntu4.1_amd64.deb ... 2021-05-17T16:34:57.4759546Z Unpacking libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T16:34:57.5083576Z Selecting previously unselected package libkadm5srv-mit11:amd64. 2021-05-17T16:34:57.5312995Z Preparing to unpack .../2-libkadm5srv-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-05-17T16:34:57.5326280Z Unpacking libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T16:34:57.5723721Z Selecting previously unselected package libkadm5clnt-mit11:amd64. 2021-05-17T16:34:57.5925586Z Preparing to unpack .../3-libkadm5clnt-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-05-17T16:34:57.5938907Z Unpacking libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T16:34:57.6283498Z Selecting previously unselected package comerr-dev:amd64. 2021-05-17T16:34:57.6545076Z Preparing to unpack .../4-comerr-dev_2.1-1.45.5-2ubuntu1_amd64.deb ... 2021-05-17T16:34:57.6580956Z Unpacking comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-05-17T16:34:57.6923823Z Selecting previously unselected package krb5-multidev:amd64. 2021-05-17T16:34:57.7141679Z Preparing to unpack .../5-krb5-multidev_1.17-6ubuntu4.1_amd64.deb ... 2021-05-17T16:34:57.7155963Z Unpacking krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T16:34:57.7643124Z Selecting previously unselected package libnorm-dev:amd64. 2021-05-17T16:34:57.7827859Z Preparing to unpack .../6-libnorm-dev_1.5.8+dfsg2-2build1_amd64.deb ... 2021-05-17T16:34:57.7837033Z Unpacking libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-05-17T16:34:57.8563050Z Selecting previously unselected package libpgm-dev:amd64. 2021-05-17T16:34:57.8794076Z Preparing to unpack .../7-libpgm-dev_5.2.122~dfsg-3ubuntu1_amd64.deb ... 2021-05-17T16:34:57.8805120Z Unpacking libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-05-17T16:34:57.9284062Z Selecting previously unselected package libkrb5-dev:amd64. 2021-05-17T16:34:57.9527985Z Preparing to unpack .../8-libkrb5-dev_1.17-6ubuntu4.1_amd64.deb ... 2021-05-17T16:34:57.9544035Z Unpacking libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T16:34:57.9803323Z Selecting previously unselected package libzmq3-dev:amd64. 2021-05-17T16:34:58.0064898Z Preparing to unpack .../9-libzmq3-dev_4.3.2-2ubuntu1_amd64.deb ... 2021-05-17T16:34:58.0079546Z Unpacking libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-05-17T16:34:58.1187830Z Setting up libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-05-17T16:34:58.1225470Z Setting up libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T16:34:58.1259439Z Setting up libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-05-17T16:34:58.1292321Z Setting up comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-05-17T16:34:58.1332645Z Setting up libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T16:34:58.1367552Z Setting up libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T16:34:58.1396160Z Setting up libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T16:34:58.1429351Z Setting up krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T16:34:58.1461206Z Setting up libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T16:34:58.1490052Z Setting up libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-05-17T16:34:58.1524339Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:34:58.1729552Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:35:01.1737227Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-17T16:35:03.3139513Z Reading package lists... 2021-05-17T16:35:03.4540005Z Building dependency tree... 2021-05-17T16:35:03.4560705Z Reading state information... 2021-05-17T16:35:03.6050856Z E: Unable to locate package udunits 2021-05-17T16:35:03.6726191Z Reading package lists... 2021-05-17T16:35:03.8023918Z Building dependency tree... 2021-05-17T16:35:03.8045385Z Reading state information... 2021-05-17T16:35:03.9539973Z The following additional packages will be installed: 2021-05-17T16:35:03.9541353Z libwebpdemux2 2021-05-17T16:35:03.9985384Z The following NEW packages will be installed: 2021-05-17T16:35:03.9989749Z libwebp-dev libwebpdemux2 2021-05-17T16:35:04.0204279Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:35:04.0204962Z Need to get 277 kB of archives. 2021-05-17T16:35:04.0205633Z After this operation, 965 kB of additional disk space will be used. 2021-05-17T16:35:04.0207350Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwebpdemux2 amd64 0.6.1-2 [9472 B] 2021-05-17T16:35:04.0223983Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwebp-dev amd64 0.6.1-2 [267 kB] 2021-05-17T16:35:04.4307999Z Fetched 277 kB in 0s (11.9 MB/s) 2021-05-17T16:35:04.4623886Z Selecting previously unselected package libwebpdemux2:amd64. 2021-05-17T16:35:04.4697387Z (Reading database ... 2021-05-17T16:35:04.4698880Z (Reading database ... 5% 2021-05-17T16:35:04.4699575Z (Reading 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... 100% 2021-05-17T16:35:04.5759513Z (Reading database ... 269145 files and directories currently installed.) 2021-05-17T16:35:04.5876836Z Preparing to unpack .../libwebpdemux2_0.6.1-2_amd64.deb ... 2021-05-17T16:35:04.5904288Z Unpacking libwebpdemux2:amd64 (0.6.1-2) ... 2021-05-17T16:35:04.6202987Z Selecting previously unselected package libwebp-dev:amd64. 2021-05-17T16:35:04.6444698Z Preparing to unpack .../libwebp-dev_0.6.1-2_amd64.deb ... 2021-05-17T16:35:04.6458382Z Unpacking libwebp-dev:amd64 (0.6.1-2) ... 2021-05-17T16:35:04.7283665Z Setting up libwebpdemux2:amd64 (0.6.1-2) ... 2021-05-17T16:35:04.7335044Z Setting up libwebp-dev:amd64 (0.6.1-2) ... 2021-05-17T16:35:04.7373755Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:35:06.7628751Z Reading package lists... 2021-05-17T16:35:06.8962085Z Building dependency tree... 2021-05-17T16:35:06.8980550Z Reading state information... 2021-05-17T16:35:07.0375657Z The following additional packages will be installed: 2021-05-17T16:35:07.0377949Z gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-05-17T16:35:07.0379662Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-05-17T16:35:07.0381215Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-05-17T16:35:07.0384707Z Suggested packages: 2021-05-17T16:35:07.0385966Z cargo-doc gdb-doc gdbserver rust-doc rust-src 2021-05-17T16:35:07.0386809Z Recommended packages: 2021-05-17T16:35:07.0387413Z cargo 2021-05-17T16:35:07.0920333Z The following NEW packages will be installed: 2021-05-17T16:35:07.0923843Z cargo gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-05-17T16:35:07.0925575Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-05-17T16:35:07.0926953Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-05-17T16:35:07.1167161Z 0 upgraded, 13 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:35:07.1168565Z Need to get 108 MB of archives. 2021-05-17T16:35:07.1169283Z After this operation, 501 MB of additional disk space will be used. 2021-05-17T16:35:07.1172144Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libbabeltrace1 amd64 1.5.8-1build1 [156 kB] 2021-05-17T16:35:07.1215027Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libipt2 amd64 2.0.1-1 [42.8 kB] 2021-05-17T16:35:07.1227594Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight-common all 3.1.8-1.2build5 [50.7 kB] 2021-05-17T16:35:07.1242862Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libboost-regex1.71.0 amd64 1.71.0-6ubuntu6 [471 kB] 2021-05-17T16:35:07.1314241Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight4v5 amd64 3.1.8-1.2build5 [232 kB] 2021-05-17T16:35:07.1355654Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxxhash0 amd64 0.7.3-1 [15.3 kB] 2021-05-17T16:35:07.1363239Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-1.47 amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [59.6 MB] 2021-05-17T16:35:07.3961613Z Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal/main amd64 gdb amd64 10.2-0ubuntu1~20.04~1 [3282 kB] 2021-05-17T16:35:07.9920139Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-dev amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [28.5 MB] 2021-05-17T16:35:08.3639804Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rustc amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [1921 kB] 2021-05-17T16:35:08.3874823Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 cargo amd64 0.47.0-1~exp1ubuntu1~20.04.1 [3147 kB] 2021-05-17T16:35:08.4254959Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libc6-dbg amd64 2.31-0ubuntu9.2 [10.5 MB] 2021-05-17T16:35:08.5807514Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rust-gdb all 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [27.5 kB] 2021-05-17T16:35:09.0094188Z Fetched 108 MB in 1s (72.7 MB/s) 2021-05-17T16:35:09.0412479Z Selecting previously unselected package libbabeltrace1:amd64. 2021-05-17T16:35:09.0495233Z (Reading database ... 2021-05-17T16:35:09.0496193Z (Reading database ... 5% 2021-05-17T16:35:09.0496871Z (Reading database ... 10% 2021-05-17T16:35:09.0497503Z (Reading database ... 15% 2021-05-17T16:35:09.0498320Z (Reading database ... 20% 2021-05-17T16:35:09.0498987Z (Reading database ... 25% 2021-05-17T16:35:09.0499622Z (Reading database ... 30% 2021-05-17T16:35:09.0500506Z (Reading database ... 35% 2021-05-17T16:35:09.0501596Z (Reading database ... 40% 2021-05-17T16:35:09.0502473Z (Reading database ... 45% 2021-05-17T16:35:09.0503472Z (Reading database ... 50% 2021-05-17T16:35:09.0537995Z (Reading database ... 55% 2021-05-17T16:35:09.0580932Z (Reading database ... 60% 2021-05-17T16:35:09.0609660Z (Reading database ... 65% 2021-05-17T16:35:09.0734817Z (Reading database ... 70% 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.../02-libsource-highlight-common_3.1.8-1.2build5_all.deb ... 2021-05-17T16:35:09.3099606Z Unpacking libsource-highlight-common (3.1.8-1.2build5) ... 2021-05-17T16:35:09.3643731Z Selecting previously unselected package libboost-regex1.71.0:amd64. 2021-05-17T16:35:09.3931733Z Preparing to unpack .../03-libboost-regex1.71.0_1.71.0-6ubuntu6_amd64.deb ... 2021-05-17T16:35:09.3948552Z Unpacking libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-05-17T16:35:09.4783609Z Selecting previously unselected package libsource-highlight4v5. 2021-05-17T16:35:09.5057315Z Preparing to unpack .../04-libsource-highlight4v5_3.1.8-1.2build5_amd64.deb ... 2021-05-17T16:35:09.5073135Z Unpacking libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-05-17T16:35:09.5589425Z Selecting previously unselected package libxxhash0:amd64. 2021-05-17T16:35:09.5878069Z Preparing to unpack .../05-libxxhash0_0.7.3-1_amd64.deb ... 2021-05-17T16:35:09.5897261Z Unpacking libxxhash0:amd64 (0.7.3-1) ... 2021-05-17T16:35:09.6203081Z Selecting previously unselected package gdb. 2021-05-17T16:35:09.6453307Z Preparing to unpack .../06-gdb_10.2-0ubuntu1~20.04~1_amd64.deb ... 2021-05-17T16:35:09.6466754Z Unpacking gdb (10.2-0ubuntu1~20.04~1) ... 2021-05-17T16:35:09.9683915Z Selecting previously unselected package libstd-rust-1.47:amd64. 2021-05-17T16:35:09.9971348Z Preparing to unpack .../07-libstd-rust-1.47_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-05-17T16:35:09.9987159Z Unpacking libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-17T16:35:15.6445353Z Selecting previously unselected package libstd-rust-dev:amd64. 2021-05-17T16:35:15.6697477Z Preparing to unpack .../08-libstd-rust-dev_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-05-17T16:35:15.6710603Z Unpacking libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-17T16:35:18.4984139Z Selecting previously unselected package rustc. 2021-05-17T16:35:18.5252232Z Preparing to unpack .../09-rustc_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-05-17T16:35:18.5271626Z Unpacking rustc (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-17T16:35:18.7116533Z Selecting previously unselected package cargo. 2021-05-17T16:35:18.7392571Z Preparing to unpack .../10-cargo_0.47.0-1~exp1ubuntu1~20.04.1_amd64.deb ... 2021-05-17T16:35:18.7406845Z Unpacking cargo (0.47.0-1~exp1ubuntu1~20.04.1) ... 2021-05-17T16:35:19.0644299Z Selecting previously unselected package libc6-dbg:amd64. 2021-05-17T16:35:19.0884211Z Preparing to unpack .../11-libc6-dbg_2.31-0ubuntu9.2_amd64.deb ... 2021-05-17T16:35:19.0895600Z Unpacking libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-05-17T16:35:20.2468208Z Selecting previously unselected package rust-gdb. 2021-05-17T16:35:20.2783923Z Preparing to unpack .../12-rust-gdb_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_all.deb ... 2021-05-17T16:35:20.2797209Z Unpacking rust-gdb (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-17T16:35:20.3438232Z Setting up libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-17T16:35:20.3477477Z Setting up libsource-highlight-common (3.1.8-1.2build5) ... 2021-05-17T16:35:20.3517872Z Setting up libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-05-17T16:35:20.3556277Z Setting up libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-17T16:35:20.3588599Z Setting up libipt2 (2.0.1-1) ... 2021-05-17T16:35:20.3625417Z Setting up libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-05-17T16:35:20.3659125Z Setting up libbabeltrace1:amd64 (1.5.8-1build1) ... 2021-05-17T16:35:20.3693913Z Setting up rustc (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-17T16:35:20.3728447Z Setting up libxxhash0:amd64 (0.7.3-1) ... 2021-05-17T16:35:20.3766062Z Setting up libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-05-17T16:35:20.3799095Z Setting up cargo (0.47.0-1~exp1ubuntu1~20.04.1) ... 2021-05-17T16:35:20.3832896Z Setting up gdb (10.2-0ubuntu1~20.04~1) ... 2021-05-17T16:35:20.3885446Z Setting up rust-gdb (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-17T16:35:20.3927223Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:35:20.4143234Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:35:23.5556381Z Reading package lists... 2021-05-17T16:35:23.6856870Z Building dependency tree... 2021-05-17T16:35:23.6876413Z Reading state information... 2021-05-17T16:35:23.8397560Z The following additional packages will be installed: 2021-05-17T16:35:23.8399553Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-05-17T16:35:23.8401064Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-05-17T16:35:23.8403007Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-05-17T16:35:23.8404482Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-05-17T16:35:23.8406094Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-05-17T16:35:23.8407484Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-05-17T16:35:23.8409165Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-05-17T16:35:23.8411331Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-05-17T16:35:23.8412838Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-05-17T16:35:23.8414513Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-05-17T16:35:23.8415969Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-05-17T16:35:23.8417565Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-05-17T16:35:23.8418958Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-05-17T16:35:23.8420686Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-05-17T16:35:23.8422202Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-05-17T16:35:23.8423747Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-05-17T16:35:23.8425301Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-05-17T16:35:23.8426838Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-05-17T16:35:23.8428688Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-05-17T16:35:23.8430185Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-05-17T16:35:23.8431425Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-05-17T16:35:23.8432760Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-05-17T16:35:23.8434295Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-05-17T16:35:23.8435413Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-05-17T16:35:23.8436720Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-05-17T16:35:23.8438344Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-05-17T16:35:23.8441493Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-05-17T16:35:23.8442976Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-05-17T16:35:23.8444184Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-05-17T16:35:23.8445319Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-05-17T16:35:23.8446409Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-05-17T16:35:23.8447643Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-05-17T16:35:23.8448819Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-05-17T16:35:23.8450011Z python3-cycler python3-dateutil python3-decorator python3-future 2021-05-17T16:35:23.8452045Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-05-17T16:35:23.8454653Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-05-17T16:35:23.8456405Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-05-17T16:35:23.8458444Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-05-17T16:35:23.8459859Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-05-17T16:35:23.8461308Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-05-17T16:35:23.8462953Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-05-17T16:35:23.8464810Z python3-webencodings qdoc-qt5 qgis-common qgis-plugin-grass 2021-05-17T16:35:23.8465986Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-05-17T16:35:23.8467376Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-05-17T16:35:23.8469195Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-05-17T16:35:23.8470699Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-05-17T16:35:23.8472016Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-05-17T16:35:23.8473249Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-05-17T16:35:23.8475223Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-05-17T16:35:23.8475844Z Suggested packages: 2021-05-17T16:35:23.8476730Z avahi-autoipd blt-demo libgdal-grass grass-dev grass-gui e00compr avce00 2021-05-17T16:35:23.8477828Z gnuplot gpsbabel gpstrans netpbm python3-rpy2 python3-termcolor grass 2021-05-17T16:35:23.8479238Z grass-dev-doc gvfs exiv2 geotiff-bin libgeotiff-epsg libvisual-0.4-plugins 2021-05-17T16:35:23.8480647Z libhdf4-doc libhdf4-alt-dev hdf4-tools libjs-jquery-ui-docs avahi-autoipd 2021-05-17T16:35:23.8482048Z | zeroconf ogdi-bin pcscd libqscintilla2-doc qtwayland5 2021-05-17T16:35:23.8483555Z qt5-qmltooling-plugins pinentry-doc python-cycler-doc python-future-doc 2021-05-17T16:35:23.8485341Z python3-genshi python3-lxml-dbg python-lxml-doc dvipng gir1.2-gtk-3.0 2021-05-17T16:35:23.8486863Z inkscape ipython3 python-matplotlib-doc python3-cairocffi python3-gi-cairo 2021-05-17T16:35:23.8488245Z python3-gobject python3-nose python3-scipy python3-tornado 2021-05-17T16:35:23.8489939Z texlive-extra-utils texlive-latex-extra ttf-staypuft python-numpy-doc 2021-05-17T16:35:23.8491337Z python3-pytest python3-numpy-dbg owslib-doc python-pil-doc python3-pil-dbg 2021-05-17T16:35:23.8492829Z python3-pandas python3-ipykernel python-psycopg2-doc python-pyparsing-doc 2021-05-17T16:35:23.8494424Z python3-pyqt5-dbg otb-qgis saga tix python3-tk-dbg qt5-doc comgt wvdial 2021-05-17T16:35:23.8495603Z wpagui libengine-pkcs11-openssl 2021-05-17T16:35:23.9289271Z The following NEW packages will be installed: 2021-05-17T16:35:23.9291178Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-05-17T16:35:23.9292873Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-05-17T16:35:23.9294320Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-05-17T16:35:23.9296105Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-05-17T16:35:23.9297851Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-05-17T16:35:23.9299815Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-05-17T16:35:23.9301226Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-05-17T16:35:23.9303121Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-05-17T16:35:23.9304823Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-05-17T16:35:23.9306809Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-05-17T16:35:23.9308369Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-05-17T16:35:23.9310068Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-05-17T16:35:23.9312622Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-05-17T16:35:23.9316400Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-05-17T16:35:23.9318175Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-05-17T16:35:23.9319823Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-05-17T16:35:23.9321101Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-05-17T16:35:23.9323036Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-05-17T16:35:23.9324337Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-05-17T16:35:23.9325393Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-05-17T16:35:23.9326546Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-05-17T16:35:23.9327606Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-05-17T16:35:23.9328600Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-05-17T16:35:23.9329920Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-05-17T16:35:23.9331245Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-05-17T16:35:23.9332843Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-05-17T16:35:23.9334057Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-05-17T16:35:23.9335262Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-05-17T16:35:23.9336594Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-05-17T16:35:23.9337762Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-05-17T16:35:23.9338840Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-05-17T16:35:23.9340589Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-05-17T16:35:23.9341760Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-05-17T16:35:23.9343122Z python3-cycler python3-dateutil python3-decorator python3-future 2021-05-17T16:35:23.9344839Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-05-17T16:35:23.9346070Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-05-17T16:35:23.9347222Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-05-17T16:35:23.9348475Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-05-17T16:35:23.9349720Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-05-17T16:35:23.9350926Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-05-17T16:35:23.9352288Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-05-17T16:35:23.9353422Z python3-webencodings qdoc-qt5 qgis qgis-common qgis-plugin-grass 2021-05-17T16:35:23.9354562Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-05-17T16:35:23.9356138Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-05-17T16:35:23.9357414Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-05-17T16:35:23.9358517Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-05-17T16:35:23.9359606Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-05-17T16:35:23.9360794Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-05-17T16:35:23.9362941Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-05-17T16:35:23.9536999Z 0 upgraded, 214 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:35:23.9538184Z Need to get 183 MB of archives. 2021-05-17T16:35:23.9539285Z After this operation, 776 MB of additional disk space will be used. 2021-05-17T16:35:23.9541393Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdouble-conversion3 amd64 3.1.5-4ubuntu1 [37.9 kB] 2021-05-17T16:35:23.9565184Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5core5a amd64 5.12.8+dfsg-0ubuntu1 [2005 kB] 2021-05-17T16:35:24.0211691Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl-mesa0 amd64 20.2.6-0ubuntu0.20.04.1 [97.7 kB] 2021-05-17T16:35:24.0230065Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl1 amd64 1.3.2-1~ubuntu0.20.04.1 [31.9 kB] 2021-05-17T16:35:24.0241559Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libevdev2 amd64 1.9.0+dfsg-1ubuntu0.1 [31.6 kB] 2021-05-17T16:35:24.0260461Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmtdev1 amd64 1.1.5-1.1 [14.2 kB] 2021-05-17T16:35:24.0272506Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-common all 1.3-2ubuntu3 [45.3 kB] 2021-05-17T16:35:24.0286449Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom2 amd64 1.3-2ubuntu3 [20.0 kB] 2021-05-17T16:35:24.0300480Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput-bin amd64 1.15.5-1ubuntu0.2 [19.1 kB] 2021-05-17T16:35:24.0307433Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput10 amd64 1.15.5-1ubuntu0.2 [112 kB] 2021-05-17T16:35:24.0370548Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5dbus5 amd64 5.12.8+dfsg-0ubuntu1 [208 kB] 2021-05-17T16:35:24.0464538Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5network5 amd64 5.12.8+dfsg-0ubuntu1 [674 kB] 2021-05-17T16:35:24.0668981Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [10.8 kB] 2021-05-17T16:35:24.0677339Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-util1 amd64 0.4.0-0ubuntu3 [11.2 kB] 2021-05-17T16:35:24.0687887Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-image0 amd64 0.4.0-1build1 [12.3 kB] 2021-05-17T16:35:24.0699772Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-keysyms1 amd64 0.4.0-1build1 [8452 B] 2021-05-17T16:35:24.0713333Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-randr0 amd64 1.14-2 [16.3 kB] 2021-05-17T16:35:24.0724622Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-render-util0 amd64 0.3.9-1build1 [9912 B] 2021-05-17T16:35:24.0736914Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinerama0 amd64 1.14-2 [5260 B] 2021-05-17T16:35:24.0746501Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinput0 amd64 1.14-2 [29.3 kB] 2021-05-17T16:35:24.0759873Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xkb1 amd64 1.14-2 [29.6 kB] 2021-05-17T16:35:24.0769631Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxkbcommon-x11-0 amd64 0.10.0-1 [13.4 kB] 2021-05-17T16:35:24.0783524Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5gui5 amd64 5.12.8+dfsg-0ubuntu1 [2971 kB] 2021-05-17T16:35:24.1411963Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5widgets5 amd64 5.12.8+dfsg-0ubuntu1 [2293 kB] 2021-05-17T16:35:24.1820432Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5svg5 amd64 5.12.8-0ubuntu1 [131 kB] 2021-05-17T16:35:24.1836582Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liborc-0.4-0 amd64 1:0.4.31-1 [188 kB] 2021-05-17T16:35:24.1877880Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgstreamer-plugins-base1.0-0 amd64 1.16.2-4 [735 kB] 2021-05-17T16:35:24.2018020Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhyphen0 amd64 2.8.8-7 [27.0 kB] 2021-05-17T16:35:24.2047282Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5positioning5 amd64 5.12.8+dfsg-0ubuntu1 [197 kB] 2021-05-17T16:35:24.2089588Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5printsupport5 amd64 5.12.8+dfsg-0ubuntu1 [193 kB] 2021-05-17T16:35:24.2128552Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5qml5 amd64 5.12.8-0ubuntu1 [1438 kB] 2021-05-17T16:35:24.2415371Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quick5 amd64 5.12.8-0ubuntu1 [1335 kB] 2021-05-17T16:35:24.2683790Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sensors5 amd64 5.12.8-0ubuntu1 [114 kB] 2021-05-17T16:35:24.2709747Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webchannel5 amd64 5.12.8-0ubuntu1 [51.2 kB] 2021-05-17T16:35:24.2724498Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwoff1 amd64 1.0.2-1build2 [42.0 kB] 2021-05-17T16:35:24.2741003Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webkit5 amd64 5.212.0~alpha4-1ubuntu2 [12.1 MB] 2021-05-17T16:35:24.5411629Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-image-formats-plugins amd64 5.12.8-0ubuntu1 [43.4 kB] 2021-05-17T16:35:24.5414857Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers-common all 3.10.4+dfsg-1ubuntu2 [897 kB] 2021-05-17T16:35:24.5569075Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2 amd64 2.2.1-2build1 [307 kB] 2021-05-17T16:35:24.5643284Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2-plugins amd64 2.2.1-2build1 [191 kB] 2021-05-17T16:35:24.5698578Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5 amd64 5.12.8+dfsg-0ubuntu1 [121 kB] 2021-05-17T16:35:24.5745889Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5-sqlite amd64 5.12.8+dfsg-0ubuntu1 [47.5 kB] 2021-05-17T16:35:24.5759328Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-data all 3.0.4+dfsg-1build3 [186 kB] 2021-05-17T16:35:24.5802301Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarpack2 amd64 3.7.0-3 [92.8 kB] 2021-05-17T16:35:24.5821344Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsuperlu5 amd64 5.2.1+dfsg1-4 [159 kB] 2021-05-17T16:35:24.5854198Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarmadillo9 amd64 1:9.800.4+dfsg-1build1 [93.2 kB] 2021-05-17T16:35:24.5875648Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcfitsio8 amd64 3.470-3 [466 kB] 2021-05-17T16:35:24.5977172Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcharls2 amd64 2.0.0+dfsg-1build1 [74.1 kB] 2021-05-17T16:35:24.5996042Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdap25 amd64 3.20.5-1 [435 kB] 2021-05-17T16:35:24.6111386Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdapclient6v5 amd64 3.20.5-1 [92.2 kB] 2021-05-17T16:35:24.6137420Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libepsilon1 amd64 0.9.2+dfsg-4 [41.0 kB] 2021-05-17T16:35:24.6149488Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfreexl1 amd64 1.0.5-3 [33.4 kB] 2021-05-17T16:35:24.6160601Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfyba0 amd64 4.1.1-6build1 [113 kB] 2021-05-17T16:35:24.6180870Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-3.8.0 amd64 3.8.0-1build1 [535 kB] 2021-05-17T16:35:24.6284308Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-c1v5 amd64 3.8.0-1build1 [69.9 kB] 2021-05-17T16:35:24.6298737Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-data all 6.3.1-1 [7647 kB] 2021-05-17T16:35:24.7944829Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libproj15 amd64 6.3.1-1 [925 kB] 2021-05-17T16:35:24.8086059Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeotiff5 amd64 1.5.1-2 [53.1 kB] 2021-05-17T16:35:24.8095826Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf4-0-alt amd64 4.2.14-1ubuntu1 [268 kB] 2021-05-17T16:35:24.8149676Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libminizip1 amd64 1.1-8build1 [20.2 kB] 2021-05-17T16:35:24.8163263Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liburiparser1 amd64 0.9.3-2 [39.3 kB] 2021-05-17T16:35:24.8173356Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlbase1 amd64 1.3.0-8build1 [45.4 kB] 2021-05-17T16:35:24.8180890Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmldom1 amd64 1.3.0-8build1 [152 kB] 2021-05-17T16:35:24.8212483Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlengine1 amd64 1.3.0-8build1 [72.5 kB] 2021-05-17T16:35:24.8231396Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnetcdf15 amd64 1:4.7.3-1 [341 kB] 2021-05-17T16:35:24.8291407Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libogdi4.1 amd64 4.1.0+ds-1build1 [198 kB] 2021-05-17T16:35:24.8323725Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqhull7 amd64 2015.2-4 [152 kB] 2021-05-17T16:35:24.8354468Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialite7 amd64 4.3.0a-6build1 [1286 kB] 2021-05-17T16:35:24.8650306Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxerces-c3.2 amd64 3.2.2+debian-1build3 [878 kB] 2021-05-17T16:35:24.8762960Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgdal26 amd64 3.0.4+dfsg-1build3 [6156 kB] 2021-05-17T16:35:25.0879832Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5concurrent5 amd64 5.12.8+dfsg-0ubuntu1 [33.5 kB] 2021-05-17T16:35:25.0890911Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5keychain1 amd64 0.10.0-1build1 [48.4 kB] 2021-05-17T16:35:25.0906194Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5serialport5 amd64 5.12.8-0ubuntu1 [33.1 kB] 2021-05-17T16:35:25.0919507Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5xml5 amd64 5.12.8+dfsg-0ubuntu1 [105 kB] 2021-05-17T16:35:25.0950527Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialindex6 amd64 1.9.3-1build1 [266 kB] 2021-05-17T16:35:25.1042808Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzip5 amd64 1.5.1-0ubuntu1 [46.7 kB] 2021-05-17T16:35:25.1053368Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-core3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [5216 kB] 2021-05-17T16:35:25.1994797Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-native3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [44.5 kB] 2021-05-17T16:35:25.2001580Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-l10n all 2.11.2+dfsg-6 [41.3 kB] 2021-05-17T16:35:25.2017297Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-15 amd64 2.11.2+dfsg-6 [1238 kB] 2021-05-17T16:35:25.2251115Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quickwidgets5 amd64 5.12.8-0ubuntu1 [39.8 kB] 2021-05-17T16:35:25.2261440Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5opengl5 amd64 5.12.8+dfsg-0ubuntu1 [136 kB] 2021-05-17T16:35:25.2281321Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqwt-qt5-6 amd64 6.1.4-1.1build1 [427 kB] 2021-05-17T16:35:25.2327878Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-gui3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3195 kB] 2021-05-17T16:35:25.2785384Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers amd64 3.10.4+dfsg-1ubuntu2 [1940 kB] 2021-05-17T16:35:25.3066608Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-core7 amd64 0.7-4ubuntu7 [81.7 kB] 2021-05-17T16:35:25.3083413Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdaemon0 amd64 0.14-7 [13.9 kB] 2021-05-17T16:35:25.3092831Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 avahi-daemon amd64 0.7-4ubuntu7 [61.0 kB] 2021-05-17T16:35:25.3108275Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4 [572 kB] 2021-05-17T16:35:25.3186644Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 blt amd64 2.5.3+dfsg-4 [4944 B] 2021-05-17T16:35:25.3194216Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 fonts-lyx all 2.3.4.2-2 [154 kB] 2021-05-17T16:35:25.3215906Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgck-1-0 amd64 3.36.0-2build1 [75.5 kB] 2021-05-17T16:35:25.3231671Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-base-3-1 amd64 3.36.0-2build1 [193 kB] 2021-05-17T16:35:25.3266585Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-ui-3-1 amd64 3.36.0-2build1 [127 kB] 2021-05-17T16:35:25.3291269Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gcr amd64 3.36.0-2build1 [63.9 kB] 2021-05-17T16:35:25.3301300Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-numpy amd64 1:1.17.4-5ubuntu3 [2725 kB] 2021-05-17T16:35:25.3671369Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-gdal amd64 3.0.4+dfsg-1build3 [527 kB] 2021-05-17T16:35:25.3748690Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-bin amd64 3.0.4+dfsg-1build3 [256 kB] 2021-05-17T16:35:25.3795080Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-glib1 amd64 0.7-4ubuntu7 [7804 B] 2021-05-17T16:35:25.3803761Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmm-glib0 amd64 1.12.8-1 [185 kB] 2021-05-17T16:35:25.3829879Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 geoclue-2.0 amd64 2.5.6-0ubuntu1 [91.9 kB] 2021-05-17T16:35:25.3871109Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit-modules amd64 0.23.20-1ubuntu0.1 [231 kB] 2021-05-17T16:35:25.3945875Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit amd64 0.23.20-1ubuntu0.1 [93.8 kB] 2021-05-17T16:35:25.3965885Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 pinentry-gnome3 amd64 1.1.0-3build1 [38.6 kB] 2021-05-17T16:35:25.3973940Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring amd64 3.36.0-1ubuntu1 [613 kB] 2021-05-17T16:35:25.4063968Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring-pkcs11 amd64 3.36.0-1ubuntu1 [28.0 kB] 2021-05-17T16:35:25.4071243Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-doc all 7.8.2-1build3 [32.4 MB] 2021-05-17T16:35:25.8528298Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblaszip8 amd64 3.4.3-1build1 [125 kB] 2021-05-17T16:35:25.8541508Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-util9 amd64 2.0.1+ds-1build3 [68.5 kB] 2021-05-17T16:35:25.8552473Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-base9 amd64 2.0.1+ds-1build3 [1739 kB] 2021-05-17T16:35:25.8743502Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-core amd64 7.8.2-1build3 [5737 kB] 2021-05-17T16:35:25.9572600Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdparanoia0 amd64 3.10.2+debian-13 [46.7 kB] 2021-05-17T16:35:25.9578470Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvisual-0.4-0 amd64 0.4.0-17 [99.8 kB] 2021-05-17T16:35:25.9590029Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gstreamer1.0-plugins-base amd64 1.16.2-4 [619 kB] 2021-05-17T16:35:25.9665408Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 iio-sensor-proxy amd64 2.8-1ubuntu1 [35.8 kB] 2021-05-17T16:35:25.9672874Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libassimp5 amd64 5.0.1~ds0-1build1 [2775 kB] 2021-05-17T16:35:26.0073600Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libexiv2-27 amd64 0.27.2-8ubuntu2.2 [788 kB] 2021-05-17T16:35:26.0168424Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi0ldbl amd64 2.4.0-10build1 [155 kB] 2021-05-17T16:35:26.0189680Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi-bin amd64 2.4.0-10build1 [10.5 kB] 2021-05-17T16:35:26.0197068Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimagequant0 amd64 2.12.2-1.1 [31.4 kB] 2021-05-17T16:35:26.0204840Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] 2021-05-17T16:35:26.0243890Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-glib4 amd64 1.22.0-2 [101 kB] 2021-05-17T16:35:26.0265493Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-proxy amd64 1.22.0-2 [5908 B] 2021-05-17T16:35:26.0271440Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-genl-3-200 amd64 3.4.0-1 [11.1 kB] 2021-05-17T16:35:26.0282842Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-route-3-200 amd64 3.4.0-1 [149 kB] 2021-05-17T16:35:26.0307940Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnss-mdns amd64 0.14.1-1ubuntu1 [22.9 kB] 2021-05-17T16:35:26.0318800Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpam-gnome-keyring amd64 3.36.0-1ubuntu1 [23.3 kB] 2021-05-17T16:35:26.0328582Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpcsclite1 amd64 1.8.26-3 [22.0 kB] 2021-05-17T16:35:26.0344345Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-faux amd64 2.0.1+ds-1build3 [27.3 kB] 2021-05-17T16:35:26.0350679Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-icebridge amd64 2.0.1+ds-1build3 [42.8 kB] 2021-05-17T16:35:26.0367314Z Get:131 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-pgpointcloud amd64 2.0.1+ds-1build3 [75.3 kB] 2021-05-17T16:35:26.0407330Z Get:132 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-python amd64 2.0.1+ds-1build3 [136 kB] 2021-05-17T16:35:26.0432896Z Get:133 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsqlite3-mod-spatialite amd64 4.3.0a-6build1 [1265 kB] 2021-05-17T16:35:26.0640965Z Get:134 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-sqlite amd64 2.0.1+ds-1build3 [89.5 kB] 2021-05-17T16:35:26.0651853Z Get:135 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugins amd64 2.0.1+ds-1build3 [12.9 kB] 2021-05-17T16:35:26.0661140Z Get:136 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dcore5 amd64 5.12.8+dfsg-0ubuntu1 [137 kB] 2021-05-17T16:35:26.0690603Z Get:137 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53drender5 amd64 5.12.8+dfsg-0ubuntu1 [689 kB] 2021-05-17T16:35:26.0800894Z Get:138 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53danimation5 amd64 5.12.8+dfsg-0ubuntu1 [159 kB] 2021-05-17T16:35:26.0831910Z Get:139 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dinput5 amd64 5.12.8+dfsg-0ubuntu1 [125 kB] 2021-05-17T16:35:26.0857334Z Get:140 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dlogic5 amd64 5.12.8+dfsg-0ubuntu1 [25.9 kB] 2021-05-17T16:35:26.0869633Z Get:141 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dextras5 amd64 5.12.8+dfsg-0ubuntu1 [157 kB] 2021-05-17T16:35:26.0900627Z Get:142 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-assimpsceneimport-plugin amd64 5.12.8+dfsg-0ubuntu1 [45.2 kB] 2021-05-17T16:35:26.0911501Z Get:143 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-defaultgeometryloader-plugin amd64 5.12.8+dfsg-0ubuntu1 [33.3 kB] 2021-05-17T16:35:26.0922409Z Get:144 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-gltfsceneio-plugin amd64 5.12.8+dfsg-0ubuntu1 [110 kB] 2021-05-17T16:35:26.0944450Z Get:145 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dquickscene2d5 amd64 5.12.8+dfsg-0ubuntu1 [38.4 kB] 2021-05-17T16:35:26.0955207Z Get:146 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-scene2d-plugin amd64 5.12.8+dfsg-0ubuntu1 [17.1 kB] 2021-05-17T16:35:26.0965545Z Get:147 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-3d3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [224 kB] 2021-05-17T16:35:26.1005101Z Get:148 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-analysis3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [927 kB] 2021-05-17T16:35:26.1141246Z Get:149 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-app3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3060 kB] 2021-05-17T16:35:26.1713487Z Get:150 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtchooser amd64 66-2build1 [24.7 kB] 2021-05-17T16:35:26.1730488Z Get:151 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qdoc-qt5 amd64 5.12.8-0ubuntu1 [507 kB] 2021-05-17T16:35:26.1795509Z Get:152 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5help5 amd64 5.12.8-0ubuntu1 [134 kB] 2021-05-17T16:35:26.1817910Z Get:153 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qhelpgenerator-qt5 amd64 5.12.8-0ubuntu1 [64.3 kB] 2021-05-17T16:35:26.1831667Z Get:154 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-assistant amd64 5.12.8-0ubuntu1 [369 kB] 2021-05-17T16:35:26.1888034Z Get:155 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtattributionsscanner-qt5 amd64 5.12.8-0ubuntu1 [26.0 kB] 2021-05-17T16:35:26.1895228Z Get:156 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designer5 amd64 5.12.8-0ubuntu1 [2778 kB] 2021-05-17T16:35:26.2251968Z Get:157 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designercomponents5 amd64 5.12.8-0ubuntu1 [718 kB] 2021-05-17T16:35:26.2338100Z Get:158 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttools5-dev-tools amd64 5.12.8-0ubuntu1 [1031 kB] 2021-05-17T16:35:26.2454667Z Get:159 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-customwidgets amd64 3.10.4+dfsg-1ubuntu2 [3397 kB] 2021-05-17T16:35:26.2862507Z Get:160 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-server3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [311 kB] 2021-05-17T16:35:26.2900651Z Get:161 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgisgrass7-3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [228 kB] 2021-05-17T16:35:26.2931970Z Get:162 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgispython3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [43.1 kB] 2021-05-17T16:35:26.2944024Z Get:163 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-glib5 amd64 1.24.8-1 [529 kB] 2021-05-17T16:35:26.3017445Z Get:164 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-proxy amd64 1.24.8-1 [5856 B] 2021-05-17T16:35:26.3019179Z Get:165 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5test5 amd64 5.12.8+dfsg-0ubuntu1 [131 kB] 2021-05-17T16:35:26.3035559Z Get:166 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-bin amd64 1.3-2ubuntu3 [5484 B] 2021-05-17T16:35:26.3043325Z Get:167 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 modemmanager amd64 1.12.8-1 [755 kB] 2021-05-17T16:35:26.3143200Z Get:168 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 ttf-bitstream-vera all 1.10-8 [352 kB] 2021-05-17T16:35:26.3190785Z Get:169 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python-matplotlib-data all 3.1.2-1ubuntu4 [3788 kB] 2021-05-17T16:35:26.3709726Z Get:170 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-soupsieve all 1.9.5+dfsg-1 [29.1 kB] 2021-05-17T16:35:26.3727273Z Get:171 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-bs4 all 4.8.2-1 [83.0 kB] 2021-05-17T16:35:26.3742407Z Get:172 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-cycler all 0.10.0-3 [8132 B] 2021-05-17T16:35:26.3744392Z Get:173 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-dateutil all 2.7.3-3ubuntu1 [63.3 kB] 2021-05-17T16:35:26.3757854Z Get:174 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-decorator all 4.4.2-0ubuntu1 [10.3 kB] 2021-05-17T16:35:26.3761091Z Get:175 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-future all 0.18.2-2 [336 kB] 2021-05-17T16:35:26.3798779Z Get:176 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-webencodings all 0.5.1-1ubuntu1 [11.0 kB] 2021-05-17T16:35:26.3800670Z Get:177 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-html5lib all 1.0.1-2 [84.3 kB] 2021-05-17T16:35:26.3813707Z Get:178 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-ipython-genutils all 0.2.0-1ubuntu1 [21.1 kB] 2021-05-17T16:35:26.3817654Z Get:179 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-traitlets all 4.3.3-3 [59.9 kB] 2021-05-17T16:35:26.3828771Z Get:180 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-jupyter-core all 4.6.3-3 [41.2 kB] 2021-05-17T16:35:26.3839133Z Get:181 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-kiwisolver amd64 1.0.1-3build1 [61.3 kB] 2021-05-17T16:35:26.3848076Z Get:182 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-lxml amd64 4.5.0-1ubuntu0.3 [1382 kB] 2021-05-17T16:35:26.4016389Z Get:183 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-pyparsing all 2.4.6-1 [61.3 kB] 2021-05-17T16:35:26.4031097Z Get:184 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-matplotlib amd64 3.1.2-1ubuntu4 [4459 kB] 2021-05-17T16:35:26.4579957Z Get:185 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-nbformat all 5.0.4-1 [29.8 kB] 2021-05-17T16:35:26.4582092Z Get:186 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-olefile all 0.46-2 [33.7 kB] 2021-05-17T16:35:26.4593987Z Get:187 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyproj amd64 2.5.0+ds-1 [297 kB] 2021-05-17T16:35:26.4629588Z Get:188 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-tz all 2019.3-1 [24.4 kB] 2021-05-17T16:35:26.4638019Z Get:189 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-owslib all 0.19.1-1 [115 kB] 2021-05-17T16:35:26.4654328Z Get:190 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-pil amd64 7.0.0-4ubuntu0.3 [363 kB] 2021-05-17T16:35:26.4702357Z Get:191 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-retrying all 1.3.3-4 [8160 B] 2021-05-17T16:35:26.4707940Z Get:192 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-plotly all 4.4.1+dfsg-1 [1960 kB] 2021-05-17T16:35:26.4964018Z Get:193 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-psycopg2 amd64 2.8.4-2 [112 kB] 2021-05-17T16:35:26.4985316Z Get:194 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-sip amd64 4.19.21+dfsg-1build1 [87.9 kB] 2021-05-17T16:35:26.4997603Z Get:195 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5 amd64 5.14.1+dfsg-3build1 [2318 kB] 2021-05-17T16:35:26.5319226Z Get:196 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qsci amd64 2.11.2+dfsg-6 [230 kB] 2021-05-17T16:35:26.5353824Z Get:197 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsql amd64 5.14.1+dfsg-3build1 [87.5 kB] 2021-05-17T16:35:26.5370279Z Get:198 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsvg amd64 5.14.1+dfsg-3build1 [26.9 kB] 2021-05-17T16:35:26.5380505Z Get:199 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtwebkit amd64 5.14.1+dfsg-3build1 [103 kB] 2021-05-17T16:35:26.5397728Z Get:200 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis-common all 3.10.4+dfsg-1ubuntu2 [2390 kB] 2021-05-17T16:35:26.5730838Z Get:201 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis amd64 3.10.4+dfsg-1ubuntu2 [7772 kB] 2021-05-17T16:35:26.6644410Z Get:202 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-tk amd64 3.8.5-1~20.04.1 [103 kB] 2021-05-17T16:35:26.6687413Z Get:203 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-leaflet all 1.6.0~dfsg-1 [313 kB] 2021-05-17T16:35:26.6777396Z Get:204 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-common all 3.10.4+dfsg-1ubuntu2 [16.7 MB] 2021-05-17T16:35:26.9728062Z Get:205 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis amd64 3.10.4+dfsg-1ubuntu2 [4788 kB] 2021-05-17T16:35:27.1898175Z Get:206 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass-common all 3.10.4+dfsg-1ubuntu2 [463 kB] 2021-05-17T16:35:27.2032315Z Get:207 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-provider-grass amd64 3.10.4+dfsg-1ubuntu2 [92.3 kB] 2021-05-17T16:35:27.2089146Z Get:208 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass amd64 3.10.4+dfsg-1ubuntu2 [601 kB] 2021-05-17T16:35:27.2299551Z Get:209 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-gtk-platformtheme amd64 5.12.8+dfsg-0ubuntu1 [124 kB] 2021-05-17T16:35:27.2338436Z Get:210 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttranslations5-l10n all 5.12.8-0ubuntu1 [1486 kB] 2021-05-17T16:35:27.2776492Z Get:211 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 wpasupplicant amd64 2:2.9-1ubuntu4.3 [1183 kB] 2021-05-17T16:35:27.3044939Z Get:212 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-bin amd64 6.3.1-1 [88.8 kB] 2021-05-17T16:35:27.3072528Z Get:213 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch-data all 20191128-3 [32.3 kB] 2021-05-17T16:35:27.3084209Z Get:214 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch amd64 2.5.2+repack0-2ubuntu3 [53.1 kB] 2021-05-17T16:35:28.4000362Z Fetched 183 MB in 3s (54.2 MB/s) 2021-05-17T16:35:28.4325131Z Selecting previously unselected package libdouble-conversion3:amd64. 2021-05-17T16:35:28.4403084Z (Reading database ... 2021-05-17T16:35:28.4405695Z (Reading database ... 5% 2021-05-17T16:35:28.4406157Z (Reading database ... 10% 2021-05-17T16:35:28.4406564Z (Reading database ... 15% 2021-05-17T16:35:28.4406978Z (Reading database ... 20% 2021-05-17T16:35:28.4407393Z (Reading database ... 25% 2021-05-17T16:35:28.4407790Z (Reading database ... 30% 2021-05-17T16:35:28.4408199Z (Reading database ... 35% 2021-05-17T16:35:28.4408597Z (Reading database ... 40% 2021-05-17T16:35:28.4409006Z (Reading database ... 45% 2021-05-17T16:35:28.4409416Z (Reading database ... 50% 2021-05-17T16:35:28.4450919Z (Reading database ... 55% 2021-05-17T16:35:28.4492932Z (Reading database ... 60% 2021-05-17T16:35:28.4524233Z (Reading database ... 65% 2021-05-17T16:35:28.4643249Z (Reading database ... 70% 2021-05-17T16:35:28.4754787Z (Reading database ... 75% 2021-05-17T16:35:28.4778845Z (Reading database ... 80% 2021-05-17T16:35:28.5139491Z (Reading database ... 85% 2021-05-17T16:35:28.5458257Z (Reading database ... 90% 2021-05-17T16:35:28.5535014Z (Reading database ... 95% 2021-05-17T16:35:28.5535920Z (Reading database ... 100% 2021-05-17T16:35:28.5536869Z (Reading database ... 269928 files and directories currently installed.) 2021-05-17T16:35:28.5685489Z Preparing to unpack .../000-libdouble-conversion3_3.1.5-4ubuntu1_amd64.deb ... 2021-05-17T16:35:28.5712881Z Unpacking libdouble-conversion3:amd64 (3.1.5-4ubuntu1) ... 2021-05-17T16:35:28.6073720Z Selecting previously unselected package libqt5core5a:amd64. 2021-05-17T16:35:28.6354851Z Preparing to unpack .../001-libqt5core5a_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-05-17T16:35:28.6429299Z Unpacking libqt5core5a:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:35:28.8222139Z Selecting previously unselected package libegl-mesa0:amd64. 2021-05-17T16:35:28.8514207Z Preparing to unpack .../002-libegl-mesa0_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-17T16:35:28.8530884Z Unpacking libegl-mesa0:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-17T16:35:28.8963115Z Selecting previously unselected package libegl1:amd64. 2021-05-17T16:35:28.9190000Z Preparing to unpack .../003-libegl1_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-17T16:35:28.9202094Z Unpacking libegl1:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-17T16:35:28.9562878Z Selecting previously unselected package libevdev2:amd64. 2021-05-17T16:35:28.9772825Z Preparing to unpack .../004-libevdev2_1.9.0+dfsg-1ubuntu0.1_amd64.deb ... 2021-05-17T16:35:28.9788714Z Unpacking libevdev2:amd64 (1.9.0+dfsg-1ubuntu0.1) ... 2021-05-17T16:35:29.0123071Z Selecting previously unselected package libmtdev1:amd64. 2021-05-17T16:35:29.0368829Z Preparing to unpack .../005-libmtdev1_1.1.5-1.1_amd64.deb ... 2021-05-17T16:35:29.0387013Z Unpacking libmtdev1:amd64 (1.1.5-1.1) ... 2021-05-17T16:35:29.0766834Z Selecting previously unselected package libwacom-common. 2021-05-17T16:35:29.1084763Z Preparing to unpack .../006-libwacom-common_1.3-2ubuntu3_all.deb ... 2021-05-17T16:35:29.1097106Z Unpacking libwacom-common (1.3-2ubuntu3) ... 2021-05-17T16:35:29.2115769Z Selecting previously unselected package libwacom2:amd64. 2021-05-17T16:35:29.2404184Z Preparing to unpack .../007-libwacom2_1.3-2ubuntu3_amd64.deb ... 2021-05-17T16:35:29.2418638Z Unpacking libwacom2:amd64 (1.3-2ubuntu3) ... 2021-05-17T16:35:29.2679373Z Selecting previously unselected package libinput-bin. 2021-05-17T16:35:29.2968543Z Preparing to unpack .../008-libinput-bin_1.15.5-1ubuntu0.2_amd64.deb ... 2021-05-17T16:35:29.2982608Z Unpacking libinput-bin (1.15.5-1ubuntu0.2) ... 2021-05-17T16:35:29.3293547Z Selecting previously unselected package libinput10:amd64. 2021-05-17T16:35:29.3590796Z Preparing to unpack .../009-libinput10_1.15.5-1ubuntu0.2_amd64.deb ... 2021-05-17T16:35:29.3602585Z Unpacking libinput10:amd64 (1.15.5-1ubuntu0.2) ... 2021-05-17T16:35:29.4042935Z Selecting previously unselected package libqt5dbus5:amd64. 2021-05-17T16:35:29.4273084Z Preparing to unpack .../010-libqt5dbus5_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-05-17T16:35:29.4289055Z Unpacking libqt5dbus5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:35:29.4738713Z Selecting previously unselected package libqt5network5:amd64. 2021-05-17T16:35:29.5027714Z Preparing to unpack .../011-libqt5network5_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-05-17T16:35:29.5044275Z Unpacking libqt5network5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:35:29.5910928Z Selecting previously unselected package libxcb-icccm4:amd64. 2021-05-17T16:35:29.6199361Z Preparing to unpack .../012-libxcb-icccm4_0.4.1-1.1_amd64.deb ... 2021-05-17T16:35:29.6216175Z Unpacking libxcb-icccm4:amd64 (0.4.1-1.1) ... 2021-05-17T16:35:29.6563596Z Selecting previously unselected package libxcb-util1:amd64. 2021-05-17T16:35:29.6781740Z Preparing to unpack .../013-libxcb-util1_0.4.0-0ubuntu3_amd64.deb ... 2021-05-17T16:35:29.6797208Z Unpacking libxcb-util1:amd64 (0.4.0-0ubuntu3) ... 2021-05-17T16:35:29.7118490Z Selecting previously unselected package libxcb-image0:amd64. 2021-05-17T16:35:29.7431640Z Preparing to unpack .../014-libxcb-image0_0.4.0-1build1_amd64.deb ... 2021-05-17T16:35:29.7441073Z Unpacking libxcb-image0:amd64 (0.4.0-1build1) ... 2021-05-17T16:35:29.7782875Z Selecting previously unselected package libxcb-keysyms1:amd64. 2021-05-17T16:35:29.8070123Z Preparing to unpack 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2021-05-17T16:36:04.0466841Z Setting up geoclue-2.0 (2.5.6-0ubuntu1) ... 2021-05-17T16:36:04.4538409Z geoclue.service is a disabled or a static unit, not starting it. 2021-05-17T16:36:04.4563231Z Setting up libqt5serialport5:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T16:36:04.4605376Z Setting up python3-nbformat (5.0.4-1) ... 2021-05-17T16:36:04.6324044Z Setting up libmbim-proxy (1.22.0-2) ... 2021-05-17T16:36:04.6359466Z Setting up python3-pyproj (2.5.0+ds-1) ... 2021-05-17T16:36:04.8022301Z Setting up libqt5network5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:04.8058462Z Setting up python3-bs4 (4.8.2-1) ... 2021-05-17T16:36:04.9991371Z Setting up libgeotiff5:amd64 (1.5.1-2) ... 2021-05-17T16:36:05.0027453Z Setting up gcr (3.36.0-2build1) ... 2021-05-17T16:36:05.0063485Z Setting up libqt5sql5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:05.0091840Z Setting up wpasupplicant (2:2.9-1ubuntu4.3) ... 2021-05-17T16:36:05.1805872Z Created symlink /etc/systemd/system/dbus-fi.w1.wpa_supplicant1.service → /lib/systemd/system/wpa_supplicant.service. 2021-05-17T16:36:05.1808510Z Created symlink /etc/systemd/system/multi-user.target.wants/wpa_supplicant.service → /lib/systemd/system/wpa_supplicant.service. 2021-05-17T16:36:05.6987259Z Setting up python3-pil:amd64 (7.0.0-4ubuntu0.3) ... 2021-05-17T16:36:05.9820216Z Setting up libqt5xml5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:05.9856279Z Setting up gstreamer1.0-plugins-base:amd64 (1.16.2-4) ... 2021-05-17T16:36:05.9896394Z Setting up libqt5qml5:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T16:36:05.9933841Z Setting up qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T16:36:05.9971107Z Setting up qtattributionsscanner-qt5 (5.12.8-0ubuntu1) ... 2021-05-17T16:36:06.0002982Z Setting up libqt5webchannel5:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T16:36:06.0042512Z Setting up python3-plotly (4.4.1+dfsg-1) ... 2021-05-17T16:36:06.1616007Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T16:36:06.1618474Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-05-17T16:36:06.1622446Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T16:36:06.1626664Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-05-17T16:36:06.2051591Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:194: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T16:36:06.2054144Z if direction is "increasing": 2021-05-17T16:36:06.2058364Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:199: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T16:36:06.2061475Z elif direction is "decreasing": 2021-05-17T16:36:06.2235624Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:176: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T16:36:06.2239680Z if direction is "increasing": 2021-05-17T16:36:06.2243814Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:179: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T16:36:06.2246268Z elif direction is "decreasing": 2021-05-17T16:36:07.1126322Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:460: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T16:36:07.1127844Z if props["offset_coordinates"] is "data": 2021-05-17T16:36:07.1129573Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:572: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-05-17T16:36:07.1130660Z if props["coordinates"] is not "data": 2021-05-17T16:36:07.9657283Z Setting up avahi-daemon (0.7-4ubuntu7) ... 2021-05-17T16:36:08.5404066Z Created symlink /etc/systemd/system/dbus-org.freedesktop.Avahi.service → /lib/systemd/system/avahi-daemon.service. 2021-05-17T16:36:08.5406742Z Created symlink /etc/systemd/system/multi-user.target.wants/avahi-daemon.service → /lib/systemd/system/avahi-daemon.service. 2021-05-17T16:36:08.5409118Z Created symlink /etc/systemd/system/sockets.target.wants/avahi-daemon.socket → /lib/systemd/system/avahi-daemon.socket. 2021-05-17T16:36:09.6964795Z Setting up libnss-mdns:amd64 (0.14.1-1ubuntu1) ... 2021-05-17T16:36:09.6996131Z First installation detected... 2021-05-17T16:36:09.6997023Z Checking NSS setup... 2021-05-17T16:36:09.7047757Z Setting up libwacom2:amd64 (1.3-2ubuntu3) ... 2021-05-17T16:36:09.7083836Z Setting up libqt5sql5-sqlite:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:09.7130985Z Setting up python3-owslib (0.19.1-1) ... 2021-05-17T16:36:10.0036417Z Setting up libgdal26 (3.0.4+dfsg-1build3) ... 2021-05-17T16:36:10.0080475Z Setting up libqmi-glib5:amd64 (1.24.8-1) ... 2021-05-17T16:36:10.0123217Z Setting up libpdal-base9 (2.0.1+ds-1build3) ... 2021-05-17T16:36:10.0162227Z Setting up libinput-bin (1.15.5-1ubuntu0.2) ... 2021-05-17T16:36:10.0203442Z Setting up libwacom-bin (1.3-2ubuntu3) ... 2021-05-17T16:36:10.0238528Z Setting up libpdal-plugin-pgpointcloud (2.0.1+ds-1build3) ... 2021-05-17T16:36:10.0269388Z Setting up libpdal-plugin-icebridge (2.0.1+ds-1build3) ... 2021-05-17T16:36:10.0309161Z Setting up libpdal-plugin-python (2.0.1+ds-1build3) ... 2021-05-17T16:36:10.0355718Z Setting up python3-gdal (3.0.4+dfsg-1build3) ... 2021-05-17T16:36:10.2327549Z Setting up libinput10:amd64 (1.15.5-1ubuntu0.2) ... 2021-05-17T16:36:10.2360043Z Setting up libpdal-plugin-faux (2.0.1+ds-1build3) ... 2021-05-17T16:36:10.2397476Z Setting up grass-core (7.8.2-1build3) ... 2021-05-17T16:36:10.5720798Z /usr/lib/grass78/etc/python/grass/pygrass/gis/__init__.py:75: SyntaxWarning: "is" with a literal. 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Did you mean "=="? 2021-05-17T16:36:10.7099538Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-05-17T16:36:10.7100635Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T16:36:10.7101627Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-05-17T16:36:10.7698636Z Setting up libpdal-plugin-sqlite (2.0.1+ds-1build3) ... 2021-05-17T16:36:10.7732059Z Setting up libqt5gui5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:10.7823299Z Setting up libqmi-proxy (1.24.8-1) ... 2021-05-17T16:36:10.7866996Z Setting up libqt5widgets5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:10.7902386Z Setting up libqt53dcore5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:10.8080811Z Setting up libqt5help5:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T16:36:10.8114431Z Setting up libqt53dlogic5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:10.8148404Z Setting up qt5-gtk-platformtheme:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:10.8183908Z Setting up libqgis-native3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T16:36:10.8219659Z Setting up libqt5printsupport5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:10.8264626Z Setting up gdal-bin (3.0.4+dfsg-1build3) ... 2021-05-17T16:36:10.9215243Z Setting up qt5-image-formats-plugins:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T16:36:10.9248762Z Setting up libqt53dinput5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:10.9289449Z Setting up libqt5opengl5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:10.9326142Z Setting up modemmanager (1.12.8-1) ... 2021-05-17T16:36:11.0740131Z Created symlink /etc/systemd/system/dbus-org.freedesktop.ModemManager1.service → /lib/systemd/system/ModemManager.service. 2021-05-17T16:36:11.0743859Z Created symlink /etc/systemd/system/multi-user.target.wants/ModemManager.service → /lib/systemd/system/ModemManager.service. 2021-05-17T16:36:11.6078716Z Setting up libqt5quick5:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T16:36:11.6112764Z Setting up libqt5designer5:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T16:36:11.6147525Z Setting up libpdal-plugins (2.0.1+ds-1build3) ... 2021-05-17T16:36:11.6196880Z Setting up libqt5svg5:amd64 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2021-05-17T16:36:11.6684640Z Setting up qt5-assistant (5.12.8-0ubuntu1) ... 2021-05-17T16:36:11.6722730Z Setting up qttools5-dev-tools (5.12.8-0ubuntu1) ... 2021-05-17T16:36:11.6752419Z Setting up libqgispython3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T16:36:11.6797552Z Setting up qt3d-scene2d-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:11.6826097Z Setting up python3-pyqt5 (5.14.1+dfsg-3build1) ... 2021-05-17T16:36:11.8448294Z Setting up python3-pyqt5.qtsvg (5.14.1+dfsg-3build1) ... 2021-05-17T16:36:11.8487132Z Setting up libqt53danimation5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:11.8535521Z Setting up qt3d-defaultgeometryloader-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:11.8570015Z Setting up qgis-providers (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T16:36:44.5923643Z Setting up libqt53dextras5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:44.5971793Z Setting up python3-pyqt5.qtsql (5.14.1+dfsg-3build1) ... 2021-05-17T16:36:44.6009986Z Setting up libqgis-customwidgets (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T16:36:44.6044915Z Setting up qt3d-gltfsceneio-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:44.6079723Z Setting up libqgis-server3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T16:36:44.6113919Z Setting up libqgisgrass7-3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T16:36:44.6147991Z Setting up qt3d-assimpsceneimport-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T16:36:44.6183912Z Setting up python3-qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T16:36:44.7670652Z Setting up libqgis-3d3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T16:36:44.7703219Z Setting up python3-pyqt5.qtwebkit (5.14.1+dfsg-3build1) ... 2021-05-17T16:36:44.7739146Z Setting up qgis-provider-grass (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T16:36:44.7777567Z Setting up python3-pyqt5.qsci (2.11.2+dfsg-6) ... 2021-05-17T16:36:44.7808281Z Setting up python3-qgis (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T16:36:44.9466216Z Setting up libqgis-app3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T16:36:44.9500513Z Setting up qgis (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T16:36:44.9541649Z Setting up qgis-plugin-grass (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T16:36:44.9684229Z Processing triggers for dbus (1.12.16-2ubuntu2.1) ... 2021-05-17T16:36:44.9794931Z Processing triggers for shared-mime-info (1.15-1) ... 2021-05-17T16:36:46.0821869Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-17T16:36:46.0996198Z Processing triggers for mime-support (3.64ubuntu1) ... 2021-05-17T16:36:46.1254041Z Processing triggers for hicolor-icon-theme (0.17-2) ... 2021-05-17T16:36:46.1408302Z Processing triggers for libglib2.0-0:amd64 (2.64.6-1~ubuntu20.04.3) ... 2021-05-17T16:36:46.2155966Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:36:46.2468584Z Processing triggers for systemd (245.4-4ubuntu3.6) ... 2021-05-17T16:36:46.5152441Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:36:57.3364444Z Setting up pinentry-gnome3 (1.1.0-3build1) ... 2021-05-17T16:36:57.3547863Z Setting up gnome-keyring (3.36.0-1ubuntu1) ... 2021-05-17T16:36:59.3467406Z ##[group]Run adigherman/actions/get-repo-name@master 2021-05-17T16:36:59.3468075Z with: 2021-05-17T16:36:59.3468515Z github_slug: neuroconductor/penn115 2021-05-17T16:36:59.3469973Z env: 2021-05-17T16:36:59.3471071Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:36:59.3471587Z TIC_DEPLOY_KEY: 2021-05-17T16:36:59.3473006Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:36:59.3476139Z GITHUB_PAT: *** 2021-05-17T16:36:59.3477056Z COVERALLS_TOKEN: *** 2021-05-17T16:36:59.3477701Z continue-on-error: true 2021-05-17T16:36:59.3478324Z VDIFFR_RUN_TESTS: 2021-05-17T16:36:59.3478771Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:36:59.3479389Z TZ: UTC 2021-05-17T16:36:59.3479758Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:36:59.3480166Z NOT_CRAN: true 2021-05-17T16:36:59.3480871Z ##[endgroup] 2021-05-17T16:36:59.3835557Z repo slug is: neuroconductor/penn115 2021-05-17T16:36:59.3982835Z ##[group]Run adigherman/actions/get-repo-version@master 2021-05-17T16:36:59.3983547Z env: 2021-05-17T16:36:59.3983934Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:36:59.3984451Z TIC_DEPLOY_KEY: 2021-05-17T16:36:59.3985127Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:36:59.3986721Z GITHUB_PAT: *** 2021-05-17T16:36:59.3987462Z COVERALLS_TOKEN: *** 2021-05-17T16:36:59.3987901Z continue-on-error: true 2021-05-17T16:36:59.3988337Z VDIFFR_RUN_TESTS: 2021-05-17T16:36:59.3988785Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:36:59.3989345Z TZ: UTC 2021-05-17T16:36:59.3989696Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:36:59.3990054Z NOT_CRAN: true 2021-05-17T16:36:59.3990387Z ##[endgroup] 2021-05-17T16:36:59.6108618Z ##[group]Run adigherman/actions/get-release-asset@master 2021-05-17T16:36:59.6109174Z with: 2021-05-17T16:36:59.6109511Z repo_name: penn115 2021-05-17T16:36:59.6109861Z repo_version: 0.1.1 2021-05-17T16:36:59.6110211Z runner_os: Linux 2021-05-17T16:36:59.6110549Z R_version: 4.1 2021-05-17T16:36:59.6110860Z env: 2021-05-17T16:36:59.6111426Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:36:59.6111815Z TIC_DEPLOY_KEY: 2021-05-17T16:36:59.6112482Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:36:59.6114011Z GITHUB_PAT: *** 2021-05-17T16:36:59.6114699Z COVERALLS_TOKEN: *** 2021-05-17T16:36:59.6115117Z continue-on-error: true 2021-05-17T16:36:59.6115518Z VDIFFR_RUN_TESTS: 2021-05-17T16:36:59.6115911Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:36:59.6116290Z TZ: UTC 2021-05-17T16:36:59.6116603Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:36:59.6116952Z NOT_CRAN: true 2021-05-17T16:36:59.6117283Z ##[endgroup] 2021-05-17T16:36:59.6510308Z Package: penn115 2021-05-17T16:36:59.6517822Z Version: 0.1.1 2021-05-17T16:36:59.6518229Z OS: Linux 2021-05-17T16:36:59.6600611Z ##[group]Run install.packages('remotes') 2021-05-17T16:36:59.6601250Z install.packages('remotes') 2021-05-17T16:36:59.6602318Z saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) 2021-05-17T16:36:59.6604222Z writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") 2021-05-17T16:36:59.6611762Z shell: /usr/local/bin/Rscript {0} 2021-05-17T16:36:59.6612135Z env: 2021-05-17T16:36:59.6612523Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:36:59.6612925Z TIC_DEPLOY_KEY: 2021-05-17T16:36:59.6613626Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:36:59.6614940Z GITHUB_PAT: *** 2021-05-17T16:36:59.6615642Z COVERALLS_TOKEN: *** 2021-05-17T16:36:59.6616274Z continue-on-error: true 2021-05-17T16:36:59.6616715Z VDIFFR_RUN_TESTS: 2021-05-17T16:36:59.6617495Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:36:59.6617929Z TZ: UTC 2021-05-17T16:36:59.6618291Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:36:59.6618661Z NOT_CRAN: true 2021-05-17T16:36:59.6619016Z ##[endgroup] 2021-05-17T16:36:59.8330231Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:36:59.8331971Z (as ‘lib’ is unspecified) 2021-05-17T16:37:16.4689279Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/remotes_2.3.0.tar.gz' 2021-05-17T16:37:17.1577555Z Content type 'binary/octet-stream' length 148709 bytes (145 KB) 2021-05-17T16:37:17.1682443Z ================================================== 2021-05-17T16:37:17.1683271Z downloaded 145 KB 2021-05-17T16:37:17.1683758Z 2021-05-17T16:37:17.4663250Z * installing *source* package ‘remotes’ ... 2021-05-17T16:37:17.4705766Z ** package ‘remotes’ successfully unpacked and MD5 sums checked 2021-05-17T16:37:17.4707622Z ** using staged installation 2021-05-17T16:37:17.4887062Z ** R 2021-05-17T16:37:17.5094554Z ** inst 2021-05-17T16:37:17.5109491Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:37:19.5083733Z ** help 2021-05-17T16:37:19.5980884Z *** installing help indices 2021-05-17T16:37:19.6553182Z ** building package indices 2021-05-17T16:37:19.8926334Z ** installing vignettes 2021-05-17T16:37:19.8994605Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:37:20.0901758Z ** testing if installed package can be loaded from final location 2021-05-17T16:37:20.3017178Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:37:20.3037168Z * DONE (remotes) 2021-05-17T16:37:20.3123535Z 2021-05-17T16:37:20.3124538Z The downloaded source packages are in 2021-05-17T16:37:20.3126312Z ‘/tmp/RtmplONAmp/downloaded_packages’ 2021-05-17T16:37:38.8822589Z ##[group]Run actions/cache@v1 2021-05-17T16:37:38.8823027Z with: 2021-05-17T16:37:38.8823595Z path: /home/runner/work/_temp/Library 2021-05-17T16:37:38.8826334Z key: Linux-e3adb7ee20b68d8bd651f6f30d4cc1690a70853cf8f0c4dcbc5c14b00f693a6a-1-b8f1fc8de357b1d96c717a309af1e9245c56bf1ecd74c6d7fc89cb4b666da030 2021-05-17T16:37:38.8830072Z restore-keys: Linux-e3adb7ee20b68d8bd651f6f30d4cc1690a70853cf8f0c4dcbc5c14b00f693a6a-1- 2021-05-17T16:37:38.8831855Z env: 2021-05-17T16:37:38.8832269Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:37:38.8832880Z TIC_DEPLOY_KEY: 2021-05-17T16:37:38.8833766Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:37:38.8835823Z GITHUB_PAT: *** 2021-05-17T16:37:38.8836573Z COVERALLS_TOKEN: *** 2021-05-17T16:37:38.8837008Z continue-on-error: true 2021-05-17T16:37:38.8837439Z VDIFFR_RUN_TESTS: 2021-05-17T16:37:38.8837884Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:37:38.8838706Z TZ: UTC 2021-05-17T16:37:38.8839624Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:37:38.8841128Z NOT_CRAN: true 2021-05-17T16:37:38.8841568Z ##[endgroup] 2021-05-17T16:37:38.9365988Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-05-17T16:37:38.9455364Z ##[group]Run Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-05-17T16:37:38.9456155Z Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-05-17T16:37:38.9456828Z sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") 2021-05-17T16:37:38.9457543Z sudo -s eval "$sysreqs" 2021-05-17T16:37:38.9503453Z shell: /usr/bin/bash -e {0} 2021-05-17T16:37:38.9503824Z env: 2021-05-17T16:37:38.9504234Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:37:38.9504659Z TIC_DEPLOY_KEY: 2021-05-17T16:37:38.9505397Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:37:38.9507208Z GITHUB_PAT: *** 2021-05-17T16:37:38.9507950Z COVERALLS_TOKEN: *** 2021-05-17T16:37:38.9508416Z continue-on-error: true 2021-05-17T16:37:38.9508870Z VDIFFR_RUN_TESTS: 2021-05-17T16:37:38.9509316Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:37:38.9510064Z TZ: UTC 2021-05-17T16:37:38.9510415Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:37:38.9510764Z NOT_CRAN: true 2021-05-17T16:37:38.9511326Z RHUB_PLATFORM: linux-x86_64-ubuntu-gcc 2021-05-17T16:37:38.9511743Z ##[endgroup] 2021-05-17T16:37:39.1444170Z Using github PAT from envvar GITHUB_PAT 2021-05-17T16:37:39.8779109Z Downloading GitHub repo r-hub/sysreqs@HEAD 2021-05-17T16:37:57.4961363Z rprojroot (NA -> 2.0.2) [CRAN] 2021-05-17T16:37:57.4964547Z crayon (NA -> 1.4.1) [CRAN] 2021-05-17T16:37:57.4965459Z R6 (NA -> 2.5.0) [CRAN] 2021-05-17T16:37:57.4966275Z desc (NA -> 1.3.0) [CRAN] 2021-05-17T16:37:57.4967088Z debugme (NA -> 1.1.0) [CRAN] 2021-05-17T16:37:57.4985030Z Installing 5 packages: rprojroot, crayon, R6, desc, debugme 2021-05-17T16:37:57.4996859Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:37:57.4997844Z (as ‘lib’ is unspecified) 2021-05-17T16:38:12.9208819Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rprojroot_2.0.2.tar.gz' 2021-05-17T16:38:13.6047942Z Content type 'binary/octet-stream' length 61445 bytes (60 KB) 2021-05-17T16:38:13.6097203Z ================================================== 2021-05-17T16:38:13.6098670Z downloaded 60 KB 2021-05-17T16:38:13.6099272Z 2021-05-17T16:38:13.6133900Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/crayon_1.4.1.tar.gz' 2021-05-17T16:38:14.2983888Z Content type 'binary/octet-stream' length 35834 bytes (34 KB) 2021-05-17T16:38:14.2985249Z ================================================== 2021-05-17T16:38:14.2986203Z downloaded 34 KB 2021-05-17T16:38:14.2986642Z 2021-05-17T16:38:14.3015627Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R6_2.5.0.tar.gz' 2021-05-17T16:38:14.9912310Z Content type 'binary/octet-stream' length 64110 bytes (62 KB) 2021-05-17T16:38:14.9961026Z ================================================== 2021-05-17T16:38:14.9962592Z downloaded 62 KB 2021-05-17T16:38:14.9963470Z 2021-05-17T16:38:15.0068453Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/desc_1.3.0.tar.gz' 2021-05-17T16:38:15.6849056Z Content type 'binary/octet-stream' length 292756 bytes (285 KB) 2021-05-17T16:38:15.7001917Z ================================================== 2021-05-17T16:38:15.7002782Z downloaded 285 KB 2021-05-17T16:38:15.7003417Z 2021-05-17T16:38:15.7041021Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/debugme_1.1.0.tar.gz' 2021-05-17T16:38:16.3844442Z Content type 'application/x-tar' length 997019 bytes (973 KB) 2021-05-17T16:38:16.4090462Z ================================================== 2021-05-17T16:38:16.4091216Z downloaded 973 KB 2021-05-17T16:38:16.4091860Z 2021-05-17T16:38:16.6734647Z * installing *source* package ‘rprojroot’ ... 2021-05-17T16:38:16.6758092Z ** package ‘rprojroot’ successfully unpacked and MD5 sums checked 2021-05-17T16:38:16.6759337Z ** using staged installation 2021-05-17T16:38:16.6913094Z ** R 2021-05-17T16:38:16.6962537Z ** inst 2021-05-17T16:38:16.6973203Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:38:17.2091668Z ** help 2021-05-17T16:38:17.2371892Z *** installing help indices 2021-05-17T16:38:17.2682497Z *** copying figures 2021-05-17T16:38:17.2689329Z ** building package indices 2021-05-17T16:38:17.4687222Z ** installing vignettes 2021-05-17T16:38:17.4740270Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:38:17.6546613Z ** testing if installed package can be loaded from final location 2021-05-17T16:38:17.8276194Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:38:17.8284363Z * DONE (rprojroot) 2021-05-17T16:38:18.0777708Z * installing *source* package ‘crayon’ ... 2021-05-17T16:38:18.0797440Z ** package ‘crayon’ successfully unpacked and MD5 sums checked 2021-05-17T16:38:18.0799144Z ** using staged installation 2021-05-17T16:38:18.0947046Z ** R 2021-05-17T16:38:18.1047992Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:38:19.0642780Z ** help 2021-05-17T16:38:19.1174181Z *** installing help indices 2021-05-17T16:38:19.1589967Z ** building package indices 2021-05-17T16:38:19.3902444Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:38:19.5715475Z ** testing if installed package can be loaded from final location 2021-05-17T16:38:19.7568069Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:38:19.7578264Z * DONE (crayon) 2021-05-17T16:38:19.9903074Z * installing *source* package ‘R6’ ... 2021-05-17T16:38:19.9917405Z ** package ‘R6’ successfully unpacked and MD5 sums checked 2021-05-17T16:38:19.9918430Z ** using staged installation 2021-05-17T16:38:20.0047403Z ** R 2021-05-17T16:38:20.0114480Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:38:20.5359422Z ** help 2021-05-17T16:38:20.5562666Z *** installing help indices 2021-05-17T16:38:20.5774012Z *** copying figures 2021-05-17T16:38:20.5777536Z ** building package indices 2021-05-17T16:38:20.7684400Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:38:20.9509984Z ** testing if installed package can be loaded from final location 2021-05-17T16:38:21.1282564Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:38:21.1289237Z * DONE (R6) 2021-05-17T16:38:21.4444525Z * installing *source* package ‘desc’ ... 2021-05-17T16:38:21.4488582Z ** package ‘desc’ successfully unpacked and MD5 sums checked 2021-05-17T16:38:21.4489639Z ** using staged installation 2021-05-17T16:38:21.4642525Z ** R 2021-05-17T16:38:21.4772752Z ** inst 2021-05-17T16:38:21.4788801Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:38:23.2364224Z ** help 2021-05-17T16:38:23.3680499Z *** installing help indices 2021-05-17T16:38:23.4566627Z ** building package indices 2021-05-17T16:38:23.7378181Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:38:23.9218219Z ** testing if installed package can be loaded from final location 2021-05-17T16:38:24.1503459Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:38:24.1518823Z * DONE (desc) 2021-05-17T16:38:24.4015237Z * installing *source* package ‘debugme’ ... 2021-05-17T16:38:24.4045786Z ** package ‘debugme’ successfully unpacked and MD5 sums checked 2021-05-17T16:38:24.4046995Z ** using staged installation 2021-05-17T16:38:24.4154579Z ** R 2021-05-17T16:38:24.4186889Z ** inst 2021-05-17T16:38:24.4206129Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:38:24.7362827Z ** help 2021-05-17T16:38:24.7492360Z *** installing help indices 2021-05-17T16:38:24.7697016Z ** building package indices 2021-05-17T16:38:24.9535758Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:38:25.1362684Z ** testing if installed package can be loaded from final location 2021-05-17T16:38:25.3217140Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:38:25.3223111Z * DONE (debugme) 2021-05-17T16:38:25.3303855Z 2021-05-17T16:38:25.3304477Z The downloaded source packages are in 2021-05-17T16:38:25.3305655Z ‘/tmp/RtmpgpbTJG/downloaded_packages’ 2021-05-17T16:38:25.3306169Z Running `R CMD build`... 2021-05-17T16:38:25.5703674Z * checking for file ‘/tmp/RtmpgpbTJG/remotes68e51785620/r-hub-sysreqs-f068afa/DESCRIPTION’ ... OK 2021-05-17T16:38:25.5705080Z * preparing ‘sysreqs’: 2021-05-17T16:38:25.5706229Z * checking DESCRIPTION meta-information ... OK 2021-05-17T16:38:25.5707507Z * checking for LF line-endings in source and make files and shell scripts 2021-05-17T16:38:25.5708416Z * checking for empty or unneeded directories 2021-05-17T16:38:25.5709337Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-17T16:38:25.5710222Z * building ‘sysreqs_1.0.0.9000.tar.gz’ 2021-05-17T16:38:25.5712730Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:38:25.5713710Z (as ‘lib’ is unspecified) 2021-05-17T16:38:25.7668289Z * installing *source* package ‘sysreqs’ ... 2021-05-17T16:38:25.7670932Z ** using staged installation 2021-05-17T16:38:25.7801175Z ** R 2021-05-17T16:38:25.7837496Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:38:26.1432181Z ** help 2021-05-17T16:38:26.1637125Z *** installing help indices 2021-05-17T16:38:26.1807060Z ** building package indices 2021-05-17T16:38:26.3742725Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:38:26.5668692Z ** testing if installed package can be loaded from final location 2021-05-17T16:38:26.7584572Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:38:26.7590007Z * DONE (sysreqs) 2021-05-17T16:38:44.2186204Z Hit:1 https://download.mono-project.com/repo/ubuntu stable-focal InRelease 2021-05-17T16:38:44.2188075Z Hit:2 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-05-17T16:38:44.2189955Z Hit:3 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease 2021-05-17T16:38:44.2191568Z Hit:4 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease 2021-05-17T16:38:44.2508452Z Hit:5 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease 2021-05-17T16:38:44.2791194Z Hit:6 http://security.ubuntu.com/ubuntu focal-security InRelease 2021-05-17T16:38:44.4260324Z Hit:7 http://ppa.launchpad.net/apt-fast/stable/ubuntu focal InRelease 2021-05-17T16:38:44.7062541Z Hit:8 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease 2021-05-17T16:38:44.9811697Z Hit:9 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-05-17T16:38:46.2487327Z Reading package lists... 2021-05-17T16:38:46.2489046Z Reading package lists... 2021-05-17T16:38:46.2489779Z Building dependency tree... 2021-05-17T16:38:46.2490422Z Reading state information... 2021-05-17T16:38:46.3646216Z libicu-dev is already the newest version (66.1-2ubuntu2). 2021-05-17T16:38:46.3647446Z libicu-dev set to manually installed. 2021-05-17T16:38:46.3648796Z libssl-dev is already the newest version (1.1.1f-1ubuntu2.3). 2021-05-17T16:38:46.3649947Z pandoc is already the newest version (2.7.3-1). 2021-05-17T16:38:46.3650720Z The following additional packages will be installed: 2021-05-17T16:38:46.3651821Z libbibutils6 libghc-pandoc-citeproc-data 2021-05-17T16:38:46.3653140Z Suggested packages: 2021-05-17T16:38:46.3654074Z libcurl4-doc libidn11-dev libldap2-dev librtmp-dev 2021-05-17T16:38:46.4084866Z The following NEW packages will be installed: 2021-05-17T16:38:46.4088101Z libbibutils6 libcurl4-openssl-dev libghc-pandoc-citeproc-data 2021-05-17T16:38:46.4089337Z pandoc-citeproc 2021-05-17T16:38:46.4274660Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T16:38:46.4275570Z Need to get 13.7 MB of archives. 2021-05-17T16:38:46.4276786Z After this operation, 109 MB of additional disk space will be used. 2021-05-17T16:38:46.4278991Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbibutils6 amd64 6.2-1 [365 kB] 2021-05-17T16:38:46.4462712Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcurl4-openssl-dev amd64 7.68.0-1ubuntu2.5 [321 kB] 2021-05-17T16:38:46.4530608Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libghc-pandoc-citeproc-data all 0.15.0.1-1build4 [51.1 kB] 2021-05-17T16:38:46.4540827Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 pandoc-citeproc amd64 0.15.0.1-1build4 [12.9 MB] 2021-05-17T16:38:47.1962795Z Fetched 13.7 MB in 0s (42.2 MB/s) 2021-05-17T16:38:47.2326203Z Selecting previously unselected package libbibutils6. 2021-05-17T16:38:47.2416452Z (Reading database ... 2021-05-17T16:38:47.2417305Z (Reading database ... 5% 2021-05-17T16:38:47.2417898Z (Reading database ... 10% 2021-05-17T16:38:47.2418805Z (Reading database ... 15% 2021-05-17T16:38:47.2419405Z (Reading database ... 20% 2021-05-17T16:38:47.2420261Z (Reading database ... 25% 2021-05-17T16:38:47.2421009Z (Reading database ... 30% 2021-05-17T16:38:47.2421599Z (Reading database ... 35% 2021-05-17T16:38:47.2422509Z (Reading database ... 40% 2021-05-17T16:38:47.2423084Z (Reading database ... 45% 2021-05-17T16:38:47.2424688Z (Reading database ... 50% 2021-05-17T16:38:47.2473151Z (Reading database ... 55% 2021-05-17T16:38:47.2524368Z (Reading database ... 60% 2021-05-17T16:38:47.2569352Z (Reading database ... 65% 2021-05-17T16:38:47.2775493Z (Reading database ... 70% 2021-05-17T16:38:47.2809283Z (Reading database ... 75% 2021-05-17T16:38:47.3079244Z (Reading database ... 80% 2021-05-17T16:38:47.3190141Z (Reading database ... 85% 2021-05-17T16:38:47.3622959Z (Reading database ... 90% 2021-05-17T16:38:47.3716214Z (Reading database ... 95% 2021-05-17T16:38:47.3716694Z (Reading database ... 100% 2021-05-17T16:38:47.3717378Z (Reading database ... 285139 files and directories currently installed.) 2021-05-17T16:38:47.3882924Z Preparing to unpack .../libbibutils6_6.2-1_amd64.deb ... 2021-05-17T16:38:47.3915123Z Unpacking libbibutils6 (6.2-1) ... 2021-05-17T16:38:47.4631751Z Selecting previously unselected package libcurl4-openssl-dev:amd64. 2021-05-17T16:38:47.4955824Z Preparing to unpack .../libcurl4-openssl-dev_7.68.0-1ubuntu2.5_amd64.deb ... 2021-05-17T16:38:47.4969387Z Unpacking libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-05-17T16:38:47.5593151Z Selecting previously unselected package libghc-pandoc-citeproc-data. 2021-05-17T16:38:47.5921681Z Preparing to unpack .../libghc-pandoc-citeproc-data_0.15.0.1-1build4_all.deb ... 2021-05-17T16:38:47.5931677Z Unpacking libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-05-17T16:38:47.6281143Z Selecting previously unselected package pandoc-citeproc. 2021-05-17T16:38:47.6598998Z Preparing to unpack .../pandoc-citeproc_0.15.0.1-1build4_amd64.deb ... 2021-05-17T16:38:47.6612124Z Unpacking pandoc-citeproc (0.15.0.1-1build4) ... 2021-05-17T16:38:47.6640627Z Replaced by files in installed package pandoc (2.7.3-1) ... 2021-05-17T16:38:49.0346526Z Setting up libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-05-17T16:38:49.0382610Z Setting up libbibutils6 (6.2-1) ... 2021-05-17T16:38:49.0420061Z Setting up libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-05-17T16:38:49.0461760Z Setting up pandoc-citeproc (0.15.0.1-1build4) ... 2021-05-17T16:38:49.0499733Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T16:38:52.2050570Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T16:38:54.1879970Z ##[group]Run remotes::install_github("ropensci/tic") 2021-05-17T16:38:54.1880640Z remotes::install_github("ropensci/tic") 2021-05-17T16:38:54.1881243Z remotes::install_github("muschellij2/ghtravis") 2021-05-17T16:38:54.1882065Z remotes::install_github("muschellij2/aghast") 2021-05-17T16:38:54.1882858Z remotes::install_cran("covr") 2021-05-17T16:38:54.1889898Z shell: /usr/local/bin/Rscript {0} 2021-05-17T16:38:54.1890627Z env: 2021-05-17T16:38:54.1891054Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:38:54.1891469Z TIC_DEPLOY_KEY: 2021-05-17T16:38:54.1892191Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:38:54.1893815Z GITHUB_PAT: *** 2021-05-17T16:38:54.1894614Z COVERALLS_TOKEN: *** 2021-05-17T16:38:54.1895065Z continue-on-error: true 2021-05-17T16:38:54.1895488Z VDIFFR_RUN_TESTS: 2021-05-17T16:38:54.1895900Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:38:54.1896327Z TZ: UTC 2021-05-17T16:38:54.1896672Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:38:54.1897021Z NOT_CRAN: true 2021-05-17T16:38:54.1897349Z ##[endgroup] 2021-05-17T16:38:54.3846957Z Using github PAT from envvar GITHUB_PAT 2021-05-17T16:38:55.0062029Z Downloading GitHub repo ropensci/tic@HEAD 2021-05-17T16:39:13.8786089Z rlang (NA -> 0.4.11) [CRAN] 2021-05-17T16:39:13.8787605Z magrittr (NA -> 2.0.1 ) [CRAN] 2021-05-17T16:39:13.8788804Z glue (NA -> 1.4.2 ) [CRAN] 2021-05-17T16:39:13.8789797Z sys (NA -> 3.4 ) [CRAN] 2021-05-17T16:39:13.8790785Z askpass (NA -> 1.1 ) [CRAN] 2021-05-17T16:39:13.8792127Z openssl (NA -> 1.4.4 ) [CRAN] 2021-05-17T16:39:13.8793065Z mime (NA -> 0.10 ) [CRAN] 2021-05-17T16:39:13.8794010Z curl (NA -> 4.3.1 ) [CRAN] 2021-05-17T16:39:13.8795528Z jsonlite (NA -> 1.7.2 ) [CRAN] 2021-05-17T16:39:13.8796453Z ini (NA -> 0.3.1 ) [CRAN] 2021-05-17T16:39:13.8797368Z httr (NA -> 1.4.2 ) [CRAN] 2021-05-17T16:39:13.8798325Z gitcreds (NA -> 0.1.1 ) [CRAN] 2021-05-17T16:39:13.8799248Z cli (NA -> 2.5.0 ) [CRAN] 2021-05-17T16:39:13.8800380Z zip (NA -> 2.1.1 ) [CRAN] 2021-05-17T16:39:13.8801369Z rstudioapi (NA -> 0.13 ) [CRAN] 2021-05-17T16:39:13.8802603Z credentials (NA -> 1.3.0 ) [CRAN] 2021-05-17T16:39:13.8803962Z fastmap (NA -> 1.1.0 ) [CRAN] 2021-05-17T16:39:13.8804910Z yaml (NA -> 2.2.1 ) [CRAN] 2021-05-17T16:39:13.8805832Z withr (NA -> 2.4.2 ) [CRAN] 2021-05-17T16:39:13.8806933Z whisker (NA -> 0.4 ) [CRAN] 2021-05-17T16:39:13.8808747Z rappdirs (NA -> 0.3.3 ) [CRAN] 2021-05-17T16:39:13.8809805Z purrr (NA -> 0.3.4 ) [CRAN] 2021-05-17T16:39:13.8811026Z lifecycle (NA -> 1.0.0 ) [CRAN] 2021-05-17T16:39:13.8811892Z gh (NA -> 1.3.0 ) [CRAN] 2021-05-17T16:39:13.8812710Z gert (NA -> 1.3.0 ) [CRAN] 2021-05-17T16:39:13.8813559Z fs (NA -> 1.5.0 ) [CRAN] 2021-05-17T16:39:13.8814554Z clipr (NA -> 0.7.1 ) [CRAN] 2021-05-17T16:39:13.8815365Z cachem (NA -> 1.0.5 ) [CRAN] 2021-05-17T16:39:13.8816198Z usethis (NA -> 2.0.1 ) [CRAN] 2021-05-17T16:39:13.8817031Z memoise (NA -> 2.0.0 ) [CRAN] 2021-05-17T16:39:13.8817989Z git2r (NA -> 0.28.0) [CRAN] 2021-05-17T16:39:13.8872179Z Installing 31 packages: rlang, magrittr, glue, sys, askpass, openssl, mime, curl, jsonlite, ini, httr, gitcreds, cli, zip, rstudioapi, credentials, fastmap, yaml, withr, whisker, rappdirs, purrr, lifecycle, gh, gert, fs, clipr, cachem, usethis, memoise, git2r 2021-05-17T16:39:13.8883321Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:39:13.8884587Z (as ‘lib’ is unspecified) 2021-05-17T16:39:29.5659707Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rlang_0.4.11.tar.gz' 2021-05-17T16:39:30.2486490Z Content type 'binary/octet-stream' length 859995 bytes (839 KB) 2021-05-17T16:39:30.2712887Z ================================================== 2021-05-17T16:39:30.2713698Z downloaded 839 KB 2021-05-17T16:39:30.2714466Z 2021-05-17T16:39:30.2744307Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/magrittr_2.0.1.tar.gz' 2021-05-17T16:39:30.9704996Z Content type 'binary/octet-stream' length 264532 bytes (258 KB) 2021-05-17T16:39:30.9851445Z ================================================== 2021-05-17T16:39:30.9852426Z downloaded 258 KB 2021-05-17T16:39:30.9852900Z 2021-05-17T16:39:30.9885771Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/glue_1.4.2.tar.gz' 2021-05-17T16:39:31.7294960Z Content type 'binary/octet-stream' length 100043 bytes (97 KB) 2021-05-17T16:39:31.7389075Z ================================================== 2021-05-17T16:39:31.7389735Z downloaded 97 KB 2021-05-17T16:39:31.7390185Z 2021-05-17T16:39:31.7425996Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sys_3.4.tar.gz' 2021-05-17T16:39:32.4354638Z Content type 'binary/octet-stream' length 20291 bytes (19 KB) 2021-05-17T16:39:32.4358640Z ================================================== 2021-05-17T16:39:32.4359518Z downloaded 19 KB 2021-05-17T16:39:32.4360151Z 2021-05-17T16:39:32.4390118Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/askpass_1.1.tar.gz' 2021-05-17T16:39:33.1143571Z Content type 'application/x-tar' length 5688 bytes 2021-05-17T16:39:33.1144746Z ================================================== 2021-05-17T16:39:33.1145397Z downloaded 5688 bytes 2021-05-17T16:39:33.1145977Z 2021-05-17T16:39:33.1176383Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/openssl_1.4.4.tar.gz' 2021-05-17T16:39:33.5628588Z Content type 'binary/octet-stream' length 1311683 bytes (1.3 MB) 2021-05-17T16:39:33.5885064Z ================================================== 2021-05-17T16:39:33.5886040Z downloaded 1.3 MB 2021-05-17T16:39:33.5886493Z 2021-05-17T16:39:33.5917684Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/mime_0.10.tar.gz' 2021-05-17T16:39:34.3159387Z Content type 'binary/octet-stream' length 12958 bytes (12 KB) 2021-05-17T16:39:34.3162732Z ================================================== 2021-05-17T16:39:34.3163411Z downloaded 12 KB 2021-05-17T16:39:34.3163695Z 2021-05-17T16:39:34.3196432Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/curl_4.3.1.tar.gz' 2021-05-17T16:39:34.9938534Z Content type 'binary/octet-stream' length 798588 bytes (779 KB) 2021-05-17T16:39:35.0160163Z ================================================== 2021-05-17T16:39:35.0161129Z downloaded 779 KB 2021-05-17T16:39:35.0161628Z 2021-05-17T16:39:35.0199138Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/jsonlite_1.7.2.tar.gz' 2021-05-17T16:39:35.7506843Z Content type 'binary/octet-stream' length 422264 bytes (412 KB) 2021-05-17T16:39:35.7688956Z ================================================== 2021-05-17T16:39:35.7689498Z downloaded 412 KB 2021-05-17T16:39:35.7689784Z 2021-05-17T16:39:35.7728983Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ini_0.3.1.tar.gz' 2021-05-17T16:39:36.2817572Z Content type 'application/x-tar' length 3475 bytes 2021-05-17T16:39:36.2818591Z ================================================== 2021-05-17T16:39:36.2819214Z downloaded 3475 bytes 2021-05-17T16:39:36.2819645Z 2021-05-17T16:39:36.2850219Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/httr_1.4.2.tar.gz' 2021-05-17T16:39:36.9828978Z Content type 'binary/octet-stream' length 159877 bytes (156 KB) 2021-05-17T16:39:36.9944508Z ================================================== 2021-05-17T16:39:36.9945314Z downloaded 156 KB 2021-05-17T16:39:36.9945783Z 2021-05-17T16:39:36.9976090Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gitcreds_0.1.1.tar.gz' 2021-05-17T16:39:37.5062794Z Content type 'binary/octet-stream' length 62129 bytes (60 KB) 2021-05-17T16:39:37.5111401Z ================================================== 2021-05-17T16:39:37.5112182Z downloaded 60 KB 2021-05-17T16:39:37.5112617Z 2021-05-17T16:39:37.5144594Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cli_2.5.0.tar.gz' 2021-05-17T16:39:38.0245589Z Content type 'binary/octet-stream' length 158132 bytes (154 KB) 2021-05-17T16:39:38.0348336Z ================================================== 2021-05-17T16:39:38.0349413Z downloaded 154 KB 2021-05-17T16:39:38.0349867Z 2021-05-17T16:39:38.0381172Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/zip_2.1.1.tar.gz' 2021-05-17T16:39:38.7468232Z Content type 'binary/octet-stream' length 113091 bytes (110 KB) 2021-05-17T16:39:38.7567601Z ================================================== 2021-05-17T16:39:38.7568620Z downloaded 110 KB 2021-05-17T16:39:38.7569202Z 2021-05-17T16:39:38.7600509Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rstudioapi_0.13.tar.gz' 2021-05-17T16:39:39.2717365Z Content type 'binary/octet-stream' length 109870 bytes (107 KB) 2021-05-17T16:39:39.2813414Z ================================================== 2021-05-17T16:39:39.2814241Z downloaded 107 KB 2021-05-17T16:39:39.2814725Z 2021-05-17T16:39:39.2850566Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/credentials_1.3.0.tar.gz' 2021-05-17T16:39:39.9616917Z Content type 'binary/octet-stream' length 230676 bytes (225 KB) 2021-05-17T16:39:39.9758012Z ================================================== 2021-05-17T16:39:39.9758910Z downloaded 225 KB 2021-05-17T16:39:39.9759606Z 2021-05-17T16:39:39.9905764Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fastmap_1.1.0.tar.gz' 2021-05-17T16:39:40.6793267Z Content type 'binary/octet-stream' length 44517 bytes (43 KB) 2021-05-17T16:39:40.6839050Z ================================================== 2021-05-17T16:39:40.6839657Z downloaded 43 KB 2021-05-17T16:39:40.6839925Z 2021-05-17T16:39:40.6872966Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/yaml_2.2.1.tar.gz' 2021-05-17T16:39:41.3620020Z Content type 'binary/octet-stream' length 92979 bytes (90 KB) 2021-05-17T16:39:41.3718716Z ================================================== 2021-05-17T16:39:41.3719375Z downloaded 90 KB 2021-05-17T16:39:41.3719898Z 2021-05-17T16:39:41.3751105Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/withr_2.4.2.tar.gz' 2021-05-17T16:39:42.0703739Z Content type 'binary/octet-stream' length 95150 bytes (92 KB) 2021-05-17T16:39:42.0800316Z ================================================== 2021-05-17T16:39:42.0801262Z downloaded 92 KB 2021-05-17T16:39:42.0801746Z 2021-05-17T16:39:42.0832131Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/whisker_0.4.tar.gz' 2021-05-17T16:39:42.7687105Z Content type 'application/x-tar' length 28675 bytes (28 KB) 2021-05-17T16:39:42.7706114Z ================================================== 2021-05-17T16:39:42.7706973Z downloaded 28 KB 2021-05-17T16:39:42.7707541Z 2021-05-17T16:39:42.7737545Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rappdirs_0.3.3.tar.gz' 2021-05-17T16:39:43.2930306Z Content type 'binary/octet-stream' length 12326 bytes (12 KB) 2021-05-17T16:39:43.2931748Z ================================================== 2021-05-17T16:39:43.2932514Z downloaded 12 KB 2021-05-17T16:39:43.2932816Z 2021-05-17T16:39:43.2970263Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/purrr_0.3.4.tar.gz' 2021-05-17T16:39:43.8043115Z Content type 'binary/octet-stream' length 373001 bytes (364 KB) 2021-05-17T16:39:43.8217706Z ================================================== 2021-05-17T16:39:43.8218819Z downloaded 364 KB 2021-05-17T16:39:43.8219352Z 2021-05-17T16:39:43.8254743Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lifecycle_1.0.0.tar.gz' 2021-05-17T16:39:44.8586991Z Content type 'binary/octet-stream' length 83493 bytes (81 KB) 2021-05-17T16:39:44.8644317Z ================================================== 2021-05-17T16:39:44.8645873Z downloaded 81 KB 2021-05-17T16:39:44.8646357Z 2021-05-17T16:39:44.8680689Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gh_1.3.0.tar.gz' 2021-05-17T16:39:45.5593855Z Content type 'binary/octet-stream' length 45853 bytes (44 KB) 2021-05-17T16:39:45.5644081Z ================================================== 2021-05-17T16:39:45.5645339Z downloaded 44 KB 2021-05-17T16:39:45.5646011Z 2021-05-17T16:39:45.5679543Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gert_1.3.0.tar.gz' 2021-05-17T16:39:46.0304212Z Content type 'binary/octet-stream' length 66528 bytes (64 KB) 2021-05-17T16:39:46.0354127Z ================================================== 2021-05-17T16:39:46.0354941Z downloaded 64 KB 2021-05-17T16:39:46.0355448Z 2021-05-17T16:39:46.0387271Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fs_1.5.0.tar.gz' 2021-05-17T16:39:46.4796261Z Content type 'binary/octet-stream' length 800044 bytes (781 KB) 2021-05-17T16:39:46.5026253Z ================================================== 2021-05-17T16:39:46.5026727Z downloaded 781 KB 2021-05-17T16:39:46.5026993Z 2021-05-17T16:39:46.5061060Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/clipr_0.7.1.tar.gz' 2021-05-17T16:39:47.0330433Z Content type 'binary/octet-stream' length 20919 bytes (20 KB) 2021-05-17T16:39:47.0331764Z ================================================== 2021-05-17T16:39:47.0332431Z downloaded 20 KB 2021-05-17T16:39:47.0332693Z 2021-05-17T16:39:47.0366953Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cachem_1.0.5.tar.gz' 2021-05-17T16:39:47.7237694Z Content type 'binary/octet-stream' length 24954 bytes (24 KB) 2021-05-17T16:39:47.7240704Z ================================================== 2021-05-17T16:39:47.7241417Z downloaded 24 KB 2021-05-17T16:39:47.7244005Z 2021-05-17T16:39:47.7279252Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/usethis_2.0.1.tar.gz' 2021-05-17T16:39:48.4027921Z Content type 'binary/octet-stream' length 304209 bytes (297 KB) 2021-05-17T16:39:48.4182621Z ================================================== 2021-05-17T16:39:48.4183431Z downloaded 297 KB 2021-05-17T16:39:48.4184065Z 2021-05-17T16:39:48.4219694Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/memoise_2.0.0.tar.gz' 2021-05-17T16:39:49.0984005Z Content type 'binary/octet-stream' length 17411 bytes (17 KB) 2021-05-17T16:39:49.0987618Z ================================================== 2021-05-17T16:39:49.0988290Z downloaded 17 KB 2021-05-17T16:39:49.0988849Z 2021-05-17T16:39:49.1034147Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/git2r_0.28.0.tar.gz' 2021-05-17T16:39:49.7937189Z Content type 'binary/octet-stream' length 1223574 bytes (1.2 MB) 2021-05-17T16:39:49.8780123Z ================================================== 2021-05-17T16:39:49.8781119Z downloaded 1.2 MB 2021-05-17T16:39:49.8781579Z 2021-05-17T16:39:50.4194846Z * installing *source* package ‘rlang’ ... 2021-05-17T16:39:50.4318534Z ** package ‘rlang’ successfully unpacked and MD5 sums checked 2021-05-17T16:39:50.4319743Z ** using staged installation 2021-05-17T16:39:50.4508649Z ** libs 2021-05-17T16:39:50.4574299Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c capture.c -o capture.o 2021-05-17T16:39:50.5658775Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c export.c -o export.o 2021-05-17T16:39:50.8969988Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c internal.c -o internal.o 2021-05-17T16:39:53.2756934Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c lib.c -o lib.o 2021-05-17T16:39:54.3286877Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-17T16:39:54.3697170Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o version.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:39:54.4206218Z installing to /home/runner/work/_temp/Library/00LOCK-rlang/00new/rlang/libs 2021-05-17T16:39:54.4234601Z ** R 2021-05-17T16:39:54.4748920Z ** inst 2021-05-17T16:39:54.4759393Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:39:58.0436281Z ** help 2021-05-17T16:39:58.7448601Z *** installing help indices 2021-05-17T16:39:59.0665088Z *** copying figures 2021-05-17T16:39:59.0671773Z ** building package indices 2021-05-17T16:39:59.5684178Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:39:59.7747082Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:39:59.9040411Z ** testing if installed package can be loaded from final location 2021-05-17T16:40:00.1712030Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:40:00.1745817Z * DONE (rlang) 2021-05-17T16:40:00.4446093Z * installing *source* package ‘magrittr’ ... 2021-05-17T16:40:00.4472941Z ** package ‘magrittr’ successfully unpacked and MD5 sums checked 2021-05-17T16:40:00.4475053Z ** using staged installation 2021-05-17T16:40:00.4617518Z ** libs 2021-05-17T16:40:00.4661645Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pipe.c -o pipe.o 2021-05-17T16:40:00.6009235Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-17T16:40:00.6569813Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o magrittr.so pipe.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:40:00.6803804Z installing to /home/runner/work/_temp/Library/00LOCK-magrittr/00new/magrittr/libs 2021-05-17T16:40:00.6812050Z ** R 2021-05-17T16:40:00.6857336Z ** inst 2021-05-17T16:40:00.6874028Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:40:00.9755293Z ** help 2021-05-17T16:40:01.0185680Z *** installing help indices 2021-05-17T16:40:01.0498384Z *** copying figures 2021-05-17T16:40:01.0502325Z ** building package indices 2021-05-17T16:40:01.2751069Z ** installing vignettes 2021-05-17T16:40:01.2752405Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:40:01.4496506Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:40:01.4673363Z ** testing if installed package can be loaded from final location 2021-05-17T16:40:01.6464550Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:40:01.6467104Z * DONE (magrittr) 2021-05-17T16:40:01.9184940Z * installing *source* package ‘glue’ ... 2021-05-17T16:40:01.9208503Z ** package ‘glue’ successfully unpacked and MD5 sums checked 2021-05-17T16:40:01.9213036Z ** using staged installation 2021-05-17T16:40:01.9388831Z ** libs 2021-05-17T16:40:01.9435809Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c glue.c -o glue.o 2021-05-17T16:40:02.0702920Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:40:02.1152288Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c trim.c -o trim.o 2021-05-17T16:40:02.2003346Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o glue.so glue.o init.o trim.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:40:02.2243684Z installing to /home/runner/work/_temp/Library/00LOCK-glue/00new/glue/libs 2021-05-17T16:40:02.2244937Z ** R 2021-05-17T16:40:02.2284653Z ** inst 2021-05-17T16:40:02.2297529Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:40:02.7323121Z ** help 2021-05-17T16:40:02.7629423Z *** installing help indices 2021-05-17T16:40:02.7928248Z *** copying figures 2021-05-17T16:40:02.7931196Z ** building package indices 2021-05-17T16:40:02.9923030Z ** installing vignettes 2021-05-17T16:40:02.9975661Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:40:03.2196848Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:40:03.2382890Z ** testing if installed package can be loaded from final location 2021-05-17T16:40:03.4638683Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:40:03.4649021Z * DONE (glue) 2021-05-17T16:40:03.7011499Z * installing *source* package ‘sys’ ... 2021-05-17T16:40:03.7025588Z ** package ‘sys’ successfully unpacked and MD5 sums checked 2021-05-17T16:40:03.7026849Z ** using staged installation 2021-05-17T16:40:03.7232427Z ** libs 2021-05-17T16:40:03.7280490Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c exec.c -o exec.o 2021-05-17T16:40:03.9361518Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:40:03.9825883Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o sys.so exec.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:40:04.0043600Z installing to /home/runner/work/_temp/Library/00LOCK-sys/00new/sys/libs 2021-05-17T16:40:04.0058024Z ** R 2021-05-17T16:40:04.0096443Z ** inst 2021-05-17T16:40:04.0105814Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:40:04.3080469Z ** help 2021-05-17T16:40:04.3293812Z *** installing help indices 2021-05-17T16:40:04.3510366Z ** building package indices 2021-05-17T16:40:04.5470099Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:40:04.7329501Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:40:04.7512735Z ** testing if installed package can be loaded from final location 2021-05-17T16:40:04.9226034Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:40:04.9231709Z * DONE (sys) 2021-05-17T16:40:05.1232186Z * installing *source* package ‘mime’ ... 2021-05-17T16:40:05.1241637Z ** package ‘mime’ successfully unpacked and MD5 sums checked 2021-05-17T16:40:05.1243166Z ** using staged installation 2021-05-17T16:40:05.1383605Z ** libs 2021-05-17T16:40:05.1433587Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:40:05.1906965Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rawmatch.c -o rawmatch.o 2021-05-17T16:40:05.2499498Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o mime.so init.o rawmatch.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:40:05.2654512Z installing to /home/runner/work/_temp/Library/00LOCK-mime/00new/mime/libs 2021-05-17T16:40:05.2671411Z ** R 2021-05-17T16:40:05.2737622Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:40:05.6062505Z ** help 2021-05-17T16:40:05.6278485Z *** installing help indices 2021-05-17T16:40:05.6451299Z ** building package indices 2021-05-17T16:40:05.8368411Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:40:06.0125441Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:40:06.0304020Z ** testing if installed package can be loaded from final location 2021-05-17T16:40:06.2117310Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:40:06.2128190Z * DONE (mime) 2021-05-17T16:40:06.5905388Z * installing *source* package ‘curl’ ... 2021-05-17T16:40:06.5983226Z ** package ‘curl’ successfully unpacked and MD5 sums checked 2021-05-17T16:40:06.5984246Z ** using staged installation 2021-05-17T16:40:06.6071034Z Found pkg-config cflags and libs! 2021-05-17T16:40:06.6940385Z Using PKG_CFLAGS=-I/usr/include/x86_64-linux-gnu 2021-05-17T16:40:06.6941519Z Using PKG_LIBS=-lcurl 2021-05-17T16:40:06.7471890Z ** libs 2021-05-17T16:40:06.7525883Z rm -f curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o 2021-05-17T16:40:06.7552254Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c callbacks.c -o callbacks.o 2021-05-17T16:40:06.8373192Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c curl.c -o curl.o 2021-05-17T16:40:06.9668121Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c download.c -o download.o 2021-05-17T16:40:07.0537930Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c escape.c -o escape.o 2021-05-17T16:40:07.1114430Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fetch.c -o fetch.o 2021-05-17T16:40:07.2162413Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c form.c -o form.o 2021-05-17T16:40:07.2941047Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c getdate.c -o getdate.o 2021-05-17T16:40:07.3494270Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c handle.c -o handle.o 2021-05-17T16:40:07.7143181Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ieproxy.c -o ieproxy.o 2021-05-17T16:40:07.7539122Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:40:07.8091330Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c interrupt.c -o interrupt.o 2021-05-17T16:40:07.8778508Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c multi.c -o multi.o 2021-05-17T16:40:08.0616791Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c nslookup.c -o nslookup.o 2021-05-17T16:40:08.1196730Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c reflist.c -o reflist.o 2021-05-17T16:40:08.1743964Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c split.c -o split.o 2021-05-17T16:40:08.2157968Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ssl.c -o ssl.o 2021-05-17T16:40:08.2616598Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typechecking.c -o typechecking.o 2021-05-17T16:40:08.3173584Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-17T16:40:08.4369261Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-17T16:40:08.5035570Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c winidn.c -o winidn.o 2021-05-17T16:40:08.5216701Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c writer.c -o writer.o 2021-05-17T16:40:08.5709043Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o -lcurl -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:40:08.6043824Z installing to /home/runner/work/_temp/Library/00LOCK-curl/00new/curl/libs 2021-05-17T16:40:08.6044977Z ** R 2021-05-17T16:40:08.6170930Z ** inst 2021-05-17T16:40:08.6207848Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:40:09.1597919Z ** help 2021-05-17T16:40:09.2232078Z *** installing help indices 2021-05-17T16:40:09.2608932Z ** building package indices 2021-05-17T16:40:09.4704060Z ** installing vignettes 2021-05-17T16:40:09.4765796Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:40:09.6614829Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:40:09.6805617Z ** testing if installed package can be loaded from final location 2021-05-17T16:40:09.8908744Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:40:09.8918215Z * DONE (curl) 2021-05-17T16:40:10.2481954Z * installing *source* package ‘jsonlite’ ... 2021-05-17T16:40:10.2532639Z ** package ‘jsonlite’ successfully unpacked and MD5 sums checked 2021-05-17T16:40:10.2533874Z ** using staged installation 2021-05-17T16:40:10.2681412Z ** libs 2021-05-17T16:40:10.2745047Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c base64.c -o base64.o 2021-05-17T16:40:10.3436167Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_array.c -o collapse_array.o 2021-05-17T16:40:10.4021683Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_object.c -o collapse_object.o 2021-05-17T16:40:10.4641612Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_pretty.c -o collapse_pretty.o 2021-05-17T16:40:10.5759242Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c escape_chars.c -o escape_chars.o 2021-05-17T16:40:10.6455923Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c integer64_to_na.c -o integer64_to_na.o 2021-05-17T16:40:10.6918895Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_datelist.c -o is_datelist.o 2021-05-17T16:40:10.7384862Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_recordlist.c -o is_recordlist.o 2021-05-17T16:40:10.7949316Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_scalarlist.c -o is_scalarlist.o 2021-05-17T16:40:10.8457089Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c modp_numtoa.c -o modp_numtoa.o 2021-05-17T16:40:10.9738940Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c null_to_na.c -o null_to_na.o 2021-05-17T16:40:11.0384557Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c num_to_char.c -o num_to_char.o 2021-05-17T16:40:11.1198779Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c parse.c -o parse.o 2021-05-17T16:40:11.1902471Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c prettify.c -o prettify.o 2021-05-17T16:40:11.2608565Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c push_parser.c -o push_parser.o 2021-05-17T16:40:11.3193276Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c r-base64.c -o r-base64.o 2021-05-17T16:40:11.3780769Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c register.c -o register.o 2021-05-17T16:40:11.4256136Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c row_collapse.c -o row_collapse.o 2021-05-17T16:40:11.4964450Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c transpose_list.c -o transpose_list.o 2021-05-17T16:40:11.5513691Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c validate.c -o validate.o 2021-05-17T16:40:11.6027943Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl.c -o yajl/yajl.o 2021-05-17T16:40:11.6665056Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o 2021-05-17T16:40:11.6994276Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_buf.c -o yajl/yajl_buf.o 2021-05-17T16:40:11.7508508Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_encode.c -o yajl/yajl_encode.o 2021-05-17T16:40:11.8522373Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_gen.c -o yajl/yajl_gen.o 2021-05-17T16:40:12.1191879Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_lex.c -o yajl/yajl_lex.o 2021-05-17T16:40:12.3986988Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_parser.c -o yajl/yajl_parser.o 2021-05-17T16:40:12.5797453Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_tree.c -o yajl/yajl_tree.o 2021-05-17T16:40:12.7219586Z ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o 2021-05-17T16:40:12.7294967Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:40:12.7606124Z installing to /home/runner/work/_temp/Library/00LOCK-jsonlite/00new/jsonlite/libs 2021-05-17T16:40:12.7623778Z ** R 2021-05-17T16:40:12.7817692Z ** inst 2021-05-17T16:40:12.7835124Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:40:13.8181173Z in method for ‘asJSON’ with signature ‘"blob"’: no definition for class “blob” 2021-05-17T16:40:13.8183152Z ** help 2021-05-17T16:40:13.8519865Z *** installing help indices 2021-05-17T16:40:13.8814948Z ** building package indices 2021-05-17T16:40:14.0963008Z ** installing vignettes 2021-05-17T16:40:14.0991280Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:40:14.2999980Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:40:14.3221094Z ** testing if installed package can be loaded from final location 2021-05-17T16:40:14.5318667Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:40:14.5333679Z * DONE (jsonlite) 2021-05-17T16:40:14.7476981Z * installing *source* package ‘ini’ ... 2021-05-17T16:40:14.7485560Z ** package ‘ini’ successfully unpacked and MD5 sums checked 2021-05-17T16:40:14.7487029Z ** using staged installation 2021-05-17T16:40:14.7615408Z ** R 2021-05-17T16:40:14.7643334Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:40:15.0089283Z ** help 2021-05-17T16:40:15.0213067Z *** installing help indices 2021-05-17T16:40:15.0437928Z ** building package indices 2021-05-17T16:40:15.2340275Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:40:15.4030757Z ** testing if installed package can be loaded from final location 2021-05-17T16:40:15.5765314Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:40:15.5770032Z * DONE (ini) 2021-05-17T16:40:15.8060785Z * installing *source* package ‘gitcreds’ ... 2021-05-17T16:40:15.8078342Z ** package ‘gitcreds’ successfully unpacked and MD5 sums checked 2021-05-17T16:40:15.8079626Z ** using staged installation 2021-05-17T16:40:15.8193784Z ** R 2021-05-17T16:40:15.8251960Z ** inst 2021-05-17T16:40:15.8267285Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:40:16.3162665Z ** help 2021-05-17T16:40:16.3401087Z *** installing help indices 2021-05-17T16:40:16.3653835Z ** building package indices 2021-05-17T16:40:16.5576406Z ** installing vignettes 2021-05-17T16:40:16.5577936Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:40:16.7298955Z ** testing if installed package can be loaded from final location 2021-05-17T16:40:16.9064949Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:40:16.9074912Z * DONE (gitcreds) 2021-05-17T16:40:17.1796830Z * installing *source* package ‘zip’ ... 2021-05-17T16:40:17.1823356Z ** package ‘zip’ successfully unpacked and MD5 sums checked 2021-05-17T16:40:17.1824552Z ** using staged installation 2021-05-17T16:40:17.1939137Z ** libs 2021-05-17T16:40:17.1991165Z gcc -g -O2 miniz.c zip.c unixutils.c tools/cmdzip.c -o tools/cmdzip 2021-05-17T16:40:20.0764301Z gcc -g -O2 miniz.c zip.c unixutils.c tools/cmdunzip.c -o tools/cmdunzip 2021-05-17T16:40:22.9287587Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:40:22.9757098Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c miniz.c -o miniz.o 2021-05-17T16:40:25.6251591Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rzip.c -o rzip.o 2021-05-17T16:40:25.7220337Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c zip.c -o zip.o 2021-05-17T16:40:25.8573439Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unixutils.c -o unixutils.o 2021-05-17T16:40:25.9237224Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o zip.so init.o miniz.o rzip.o zip.o unixutils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:40:25.9524058Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-zip/00new/zip 2021-05-17T16:40:25.9554557Z ** R 2021-05-17T16:40:25.9597170Z ** inst 2021-05-17T16:40:25.9610451Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:40:26.3198086Z ** help 2021-05-17T16:40:26.3422675Z *** installing help indices 2021-05-17T16:40:26.3675926Z ** building package indices 2021-05-17T16:40:26.5671481Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:40:26.7537791Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:40:26.7723888Z ** testing if installed package can be loaded from final location 2021-05-17T16:40:26.9609476Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:40:26.9615945Z * DONE (zip) 2021-05-17T16:40:27.2807236Z * installing *source* package ‘rstudioapi’ ... 2021-05-17T16:40:27.2849402Z ** package ‘rstudioapi’ successfully unpacked and MD5 sums checked 2021-05-17T16:40:27.2851515Z ** using staged installation 2021-05-17T16:40:27.2988429Z ** R 2021-05-17T16:40:27.3096702Z ** inst 2021-05-17T16:40:27.3115709Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:40:27.9202749Z ** help 2021-05-17T16:40:28.1230629Z *** installing help indices 2021-05-17T16:40:28.2581268Z *** copying figures 2021-05-17T16:40:28.2584875Z ** building package indices 2021-05-17T16:40:28.5762952Z ** installing vignettes 2021-05-17T16:40:28.5814675Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:40:28.7639650Z ** testing if installed package can be loaded from final location 2021-05-17T16:40:28.9486617Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:40:28.9518825Z * DONE (rstudioapi) 2021-05-17T16:40:29.1906954Z * installing *source* package ‘fastmap’ ... 2021-05-17T16:40:29.1923580Z ** package ‘fastmap’ successfully unpacked and MD5 sums checked 2021-05-17T16:40:29.1924812Z ** using staged installation 2021-05-17T16:40:29.2113323Z ** libs 2021-05-17T16:40:29.2169598Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilib/ -I/usr/local/include -DR_NO_REMAP -fpic -g -O2 -c fastmap.cpp -o fastmap.o 2021-05-17T16:40:31.3893681Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilib/ -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:40:31.4375712Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fastmap.so fastmap.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:40:31.4993564Z installing to /home/runner/work/_temp/Library/00LOCK-fastmap/00new/fastmap/libs 2021-05-17T16:40:31.5017655Z ** R 2021-05-17T16:40:31.5068395Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:40:31.9471701Z ** help 2021-05-17T16:40:31.9649903Z *** installing help indices 2021-05-17T16:40:31.9841735Z ** building package indices 2021-05-17T16:40:32.1872807Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:40:32.3649186Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:40:32.3841211Z ** testing if installed package can be loaded from final location 2021-05-17T16:40:32.5658209Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:40:32.5666125Z * DONE (fastmap) 2021-05-17T16:40:32.8236079Z * installing *source* package ‘yaml’ ... 2021-05-17T16:40:32.8261440Z ** package ‘yaml’ successfully unpacked and MD5 sums checked 2021-05-17T16:40:32.8262704Z ** using staged installation 2021-05-17T16:40:32.8359408Z ** libs 2021-05-17T16:40:32.8413138Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api.c -o api.o 2021-05-17T16:40:33.1895896Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dumper.c -o dumper.o 2021-05-17T16:40:33.3046554Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c emitter.c -o emitter.o 2021-05-17T16:40:34.3320710Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c implicit.c -o implicit.o 2021-05-17T16:40:34.5441949Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c loader.c -o loader.o 2021-05-17T16:40:34.6869459Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c parser.c -o parser.o 2021-05-17T16:40:35.0708284Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_emit.c -o r_emit.o 2021-05-17T16:40:35.3660225Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_ext.c -o r_ext.o 2021-05-17T16:40:35.4674562Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_parse.c -o r_parse.o 2021-05-17T16:40:35.8961436Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reader.c -o reader.o 2021-05-17T16:40:36.0088199Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c scanner.c -o scanner.o 2021-05-17T16:40:37.4260844Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c writer.c -o writer.o 2021-05-17T16:40:37.4882243Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o yaml.so api.o dumper.o emitter.o implicit.o loader.o parser.o r_emit.o r_ext.o r_parse.o reader.o scanner.o writer.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:40:37.5169229Z installing to /home/runner/work/_temp/Library/00LOCK-yaml/00new/yaml/libs 2021-05-17T16:40:37.5189408Z ** R 2021-05-17T16:40:37.5225462Z ** inst 2021-05-17T16:40:37.5242383Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:40:37.7852988Z ** help 2021-05-17T16:40:37.8059981Z *** installing help indices 2021-05-17T16:40:37.8299785Z ** building package indices 2021-05-17T16:40:38.0216467Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:40:38.2042762Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:40:38.2229556Z ** testing if installed package can be loaded from final location 2021-05-17T16:40:38.3863247Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:40:38.3870114Z * DONE (yaml) 2021-05-17T16:40:38.6536380Z * installing *source* package ‘withr’ ... 2021-05-17T16:40:38.6562499Z ** package ‘withr’ successfully unpacked and MD5 sums checked 2021-05-17T16:40:38.6563998Z ** using staged installation 2021-05-17T16:40:38.6739984Z ** R 2021-05-17T16:40:38.6836992Z ** inst 2021-05-17T16:40:38.6848474Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:40:39.3613325Z ** help 2021-05-17T16:40:39.4401154Z *** installing help indices 2021-05-17T16:40:39.4932238Z *** copying figures 2021-05-17T16:40:39.4935536Z ** building package indices 2021-05-17T16:40:39.7402972Z ** installing vignettes 2021-05-17T16:40:39.7438351Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:40:39.9312791Z ** testing if installed package can be loaded from final location 2021-05-17T16:40:40.1109904Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:40:40.1121446Z * DONE (withr) 2021-05-17T16:40:40.3490216Z * installing *source* package ‘whisker’ ... 2021-05-17T16:40:40.3509012Z ** package ‘whisker’ successfully unpacked and MD5 sums checked 2021-05-17T16:40:40.3510277Z ** using staged installation 2021-05-17T16:40:40.3610247Z ** R 2021-05-17T16:40:40.3656782Z ** inst 2021-05-17T16:40:40.3675271Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:40:40.7643888Z ** help 2021-05-17T16:40:40.7863509Z *** installing help indices 2021-05-17T16:40:40.8102831Z ** building package indices 2021-05-17T16:40:41.0024651Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:40:41.1807774Z ** testing if installed package can be loaded from final location 2021-05-17T16:40:41.3544037Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:40:41.3551585Z * DONE (whisker) 2021-05-17T16:40:41.5826018Z * installing *source* package ‘rappdirs’ ... 2021-05-17T16:40:41.5837946Z ** package ‘rappdirs’ successfully unpacked and MD5 sums checked 2021-05-17T16:40:41.5839093Z ** using staged installation 2021-05-17T16:40:41.6055381Z ** libs 2021-05-17T16:40:41.6101577Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:40:41.6555989Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c win-path.c -o win-path.o 2021-05-17T16:40:41.7037292Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rappdirs.so init.o win-path.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:40:41.7189218Z installing to /home/runner/work/_temp/Library/00LOCK-rappdirs/00new/rappdirs/libs 2021-05-17T16:40:41.7203695Z ** R 2021-05-17T16:40:41.7248796Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:40:42.0369954Z ** help 2021-05-17T16:40:42.0615823Z *** installing help indices 2021-05-17T16:40:42.0836443Z ** building package indices 2021-05-17T16:40:42.2894202Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:40:42.4675951Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:40:42.4851980Z ** testing if installed package can be loaded from final location 2021-05-17T16:40:42.6636996Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:40:42.6643449Z * DONE (rappdirs) 2021-05-17T16:40:43.1632016Z * installing *source* package ‘fs’ ... 2021-05-17T16:40:43.1764460Z ** package ‘fs’ successfully unpacked and MD5 sums checked 2021-05-17T16:40:43.1766378Z ** using staged installation 2021-05-17T16:40:43.1922562Z ** libs 2021-05-17T16:40:43.1980609Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c id.cc -o id.o 2021-05-17T16:40:43.7723275Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c file.cc -o file.o 2021-05-17T16:40:44.2208871Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c path.cc -o path.o 2021-05-17T16:40:44.6671815Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c fs.cc -o fs.o 2021-05-17T16:40:44.7543155Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c link.cc -o link.o 2021-05-17T16:40:45.0774424Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c utils.cc -o utils.o 2021-05-17T16:40:45.3975079Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c init.cc -o init.o 2021-05-17T16:40:45.4836072Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c dir.cc -o dir.o 2021-05-17T16:40:45.9599771Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c getmode.cc -o getmode.o 2021-05-17T16:40:46.2679592Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c error.cc -o error.o 2021-05-17T16:40:46.3700608Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c unix/getmode.cc -o unix/getmode.o 2021-05-17T16:40:46.6988044Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/setmode.c -o bsd/setmode.o 2021-05-17T16:40:46.8253475Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/strmode.c -o bsd/strmode.o 2021-05-17T16:40:46.8693194Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/reallocarray.c -o bsd/reallocarray.o 2021-05-17T16:40:46.8988428Z (cd libuv-1.38.1 \ 2021-05-17T16:40:46.8990506Z && CC="gcc" CFLAGS="-g -O2 -I/usr/local/include -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" LDFLAGS="-L/usr/local/lib" ./configure --quiet) 2021-05-17T16:40:51.5926122Z make --directory=libuv-1.38.1 \ 2021-05-17T16:40:51.5926940Z HAVE_DTRACE=0 2021-05-17T16:40:51.6017768Z make[1]: Entering directory '/tmp/RtmphX7zFc/R.INSTALL78fd3d7ececd/fs/src/libuv-1.38.1' 2021-05-17T16:40:51.6109083Z CC src/libuv_la-fs-poll.lo 2021-05-17T16:40:52.2422082Z CC src/libuv_la-idna.lo 2021-05-17T16:40:52.8811531Z CC src/libuv_la-inet.lo 2021-05-17T16:40:53.5389110Z CC src/libuv_la-random.lo 2021-05-17T16:40:54.0686439Z CC src/libuv_la-strscpy.lo 2021-05-17T16:40:54.5666152Z CC src/libuv_la-threadpool.lo 2021-05-17T16:40:55.2496538Z CC src/libuv_la-timer.lo 2021-05-17T16:40:55.8779661Z CC src/libuv_la-uv-data-getter-setters.lo 2021-05-17T16:40:56.4301309Z CC src/libuv_la-uv-common.lo 2021-05-17T16:40:57.5693099Z CC src/libuv_la-version.lo 2021-05-17T16:40:58.0742154Z CC src/unix/libuv_la-async.lo 2021-05-17T16:40:58.7181974Z CC src/unix/libuv_la-core.lo 2021-05-17T16:40:59.9684809Z CC src/unix/libuv_la-dl.lo 2021-05-17T16:41:00.5237577Z CC src/unix/libuv_la-fs.lo 2021-05-17T16:41:02.2063379Z CC src/unix/libuv_la-getaddrinfo.lo 2021-05-17T16:41:02.8038721Z CC src/unix/libuv_la-getnameinfo.lo 2021-05-17T16:41:03.3503395Z CC src/unix/libuv_la-loop-watcher.lo 2021-05-17T16:41:03.9792196Z CC src/unix/libuv_la-loop.lo 2021-05-17T16:41:04.5627092Z CC src/unix/libuv_la-pipe.lo 2021-05-17T16:41:05.1975043Z CC src/unix/libuv_la-poll.lo 2021-05-17T16:41:05.7691655Z CC src/unix/libuv_la-process.lo 2021-05-17T16:41:06.5613974Z CC src/unix/libuv_la-random-devurandom.lo 2021-05-17T16:41:07.1123570Z CC src/unix/libuv_la-signal.lo 2021-05-17T16:41:08.0219397Z CC src/unix/libuv_la-stream.lo 2021-05-17T16:41:09.1186626Z CC src/unix/libuv_la-tcp.lo 2021-05-17T16:41:09.8001960Z CC src/unix/libuv_la-thread.lo 2021-05-17T16:41:10.5883314Z CC src/unix/libuv_la-tty.lo 2021-05-17T16:41:11.2268504Z CC src/unix/libuv_la-udp.lo 2021-05-17T16:41:12.2633700Z CC src/unix/libuv_la-linux-core.lo 2021-05-17T16:41:13.3002663Z CC src/unix/libuv_la-linux-inotify.lo 2021-05-17T16:41:14.1246240Z CC src/unix/libuv_la-linux-syscalls.lo 2021-05-17T16:41:14.5876720Z CC src/unix/libuv_la-procfs-exepath.lo 2021-05-17T16:41:15.1106394Z CC src/unix/libuv_la-proctitle.lo 2021-05-17T16:41:15.6764403Z CC src/unix/libuv_la-random-getrandom.lo 2021-05-17T16:41:16.1934316Z CC src/unix/libuv_la-random-sysctl-linux.lo 2021-05-17T16:41:16.7256461Z CCLD libuv.la 2021-05-17T16:41:16.9352300Z ar: `u' modifier ignored since `D' is the default (see `U') 2021-05-17T16:41:16.9679247Z make[1]: Leaving directory '/tmp/RtmphX7zFc/R.INSTALL78fd3d7ececd/fs/src/libuv-1.38.1' 2021-05-17T16:41:16.9697980Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fs.so id.o file.o path.o fs.o link.o utils.o init.o dir.o getmode.o error.o unix/getmode.o bsd/setmode.o bsd/strmode.o bsd/reallocarray.o ./libuv-1.38.1/.libs/libuv.a -pthread -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:41:17.0567034Z installing to /home/runner/work/_temp/Library/00LOCK-fs/00new/fs/libs 2021-05-17T16:41:17.0593904Z ** R 2021-05-17T16:41:17.0708935Z ** inst 2021-05-17T16:41:17.0721065Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:41:18.1186114Z ** help 2021-05-17T16:41:18.1882656Z *** installing help indices 2021-05-17T16:41:18.2406160Z ** building package indices 2021-05-17T16:41:18.4682886Z ** installing vignettes 2021-05-17T16:41:18.4792901Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:41:18.7160015Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:41:18.7353342Z ** testing if installed package can be loaded from final location 2021-05-17T16:41:18.9803061Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:41:18.9804840Z * DONE (fs) 2021-05-17T16:41:19.2185747Z * installing *source* package ‘clipr’ ... 2021-05-17T16:41:19.2203453Z ** package ‘clipr’ successfully unpacked and MD5 sums checked 2021-05-17T16:41:19.2205835Z ** using staged installation 2021-05-17T16:41:19.2423718Z ** R 2021-05-17T16:41:19.2468440Z ** inst 2021-05-17T16:41:19.2479776Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:41:19.5762776Z ** help 2021-05-17T16:41:19.5959618Z *** installing help indices 2021-05-17T16:41:19.6183780Z ** building package indices 2021-05-17T16:41:19.8196687Z ** installing vignettes 2021-05-17T16:41:19.8198340Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:41:20.0048870Z ** testing if installed package can be loaded from final location 2021-05-17T16:41:20.2004031Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:41:20.2010645Z * DONE (clipr) 2021-05-17T16:41:21.0335810Z * installing *source* package ‘git2r’ ... 2021-05-17T16:41:21.0560036Z ** package ‘git2r’ successfully unpacked and MD5 sums checked 2021-05-17T16:41:21.0561121Z ** using staged installation 2021-05-17T16:41:21.2366222Z checking build system type... x86_64-unknown-linux-gnu 2021-05-17T16:41:21.2367571Z checking host system type... x86_64-unknown-linux-gnu 2021-05-17T16:41:21.2384340Z checking for gcc... gcc 2021-05-17T16:41:21.2944946Z checking whether the C compiler works... yes 2021-05-17T16:41:21.2945952Z checking for C compiler default output file name... a.out 2021-05-17T16:41:21.3286905Z checking for suffix of executables... 2021-05-17T16:41:21.3672920Z checking whether we are cross compiling... no 2021-05-17T16:41:21.3878612Z checking for suffix of object files... o 2021-05-17T16:41:21.4068694Z checking whether we are using the GNU C compiler... yes 2021-05-17T16:41:21.4272517Z checking whether gcc accepts -g... yes 2021-05-17T16:41:21.4633626Z checking for gcc option to accept ISO C89... none needed 2021-05-17T16:41:21.4641573Z checking for pkg-config... /usr/bin/pkg-config 2021-05-17T16:41:21.4655547Z checking pkg-config is at least version 0.9.0... yes 2021-05-17T16:41:21.5330542Z Found pkg-config cflags and libs! 2021-05-17T16:41:21.6228398Z checking whether the libgit2 version will work in git2r... yes 2021-05-17T16:41:21.7485495Z checking whether the libgit2 function git_buf_dispose is available... yes 2021-05-17T16:41:21.8716206Z checking whether the libgit2 constant GIT_OBJECT_ANY is available... yes 2021-05-17T16:41:21.9981314Z checking whether the libgit2 function git_error_last is available... yes 2021-05-17T16:41:22.1079710Z checking whether the libgit2 function git_oid_is_zero is available... no 2021-05-17T16:41:22.1081668Z ----- Results of the git2r package configure ----- 2021-05-17T16:41:22.1082542Z 2021-05-17T16:41:22.1083723Z PKG_CFLAGS: -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR 2021-05-17T16:41:22.1084819Z PKG_LIBS: -lgit2 2021-05-17T16:41:22.1085315Z 2021-05-17T16:41:22.1086657Z -------------------------------------------------- 2021-05-17T16:41:22.1269446Z configure: creating ./config.status 2021-05-17T16:41:22.1992602Z config.status: creating src/Makevars 2021-05-17T16:41:22.2593222Z ** libs 2021-05-17T16:41:22.2660419Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r.c -o git2r.o 2021-05-17T16:41:22.3367905Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_S3.c -o git2r_S3.o 2021-05-17T16:41:22.3874896Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_arg.c -o git2r_arg.o 2021-05-17T16:41:22.5476932Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_blame.c -o git2r_blame.o 2021-05-17T16:41:22.6493095Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_blob.c -o git2r_blob.o 2021-05-17T16:41:22.7716625Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_branch.c -o git2r_branch.o 2021-05-17T16:41:23.0001001Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_checkout.c -o git2r_checkout.o 2021-05-17T16:41:23.0993622Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_clone.c -o git2r_clone.o 2021-05-17T16:41:23.1961394Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_commit.c -o git2r_commit.o 2021-05-17T16:41:23.3513199Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_config.c -o git2r_config.o 2021-05-17T16:41:23.5128596Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_cred.c -o git2r_cred.o 2021-05-17T16:41:23.6080220Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_diff.c -o git2r_diff.o 2021-05-17T16:41:23.8576031Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_error.c -o git2r_error.o 2021-05-17T16:41:23.9220347Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_graph.c -o git2r_graph.o 2021-05-17T16:41:24.0056007Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_index.c -o git2r_index.o 2021-05-17T16:41:24.1092168Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_libgit2.c -o git2r_libgit2.o 2021-05-17T16:41:24.1927497Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_merge.c -o git2r_merge.o 2021-05-17T16:41:24.3745325Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_note.c -o git2r_note.o 2021-05-17T16:41:24.5015957Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_object.c -o git2r_object.o 2021-05-17T16:41:24.5956439Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_odb.c -o git2r_odb.o 2021-05-17T16:41:24.7673952Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_oid.c -o git2r_oid.o 2021-05-17T16:41:24.8405917Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_push.c -o git2r_push.o 2021-05-17T16:41:24.9253420Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reference.c -o git2r_reference.o 2021-05-17T16:41:25.0198483Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reflog.c -o git2r_reflog.o 2021-05-17T16:41:25.7901383Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_remote.c -o git2r_remote.o 2021-05-17T16:41:25.7904321Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_repository.c -o git2r_repository.o 2021-05-17T16:41:25.7906597Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reset.c -o git2r_reset.o 2021-05-17T16:41:25.7909004Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_revparse.c -o git2r_revparse.o 2021-05-17T16:41:25.7911475Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_revwalk.c -o git2r_revwalk.o 2021-05-17T16:41:25.8114611Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_signature.c -o git2r_signature.o 2021-05-17T16:41:25.8896389Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_stash.c -o git2r_stash.o 2021-05-17T16:41:26.0066954Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_status.c -o git2r_status.o 2021-05-17T16:41:26.1798176Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_tag.c -o git2r_tag.o 2021-05-17T16:41:26.3101294Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_transfer.c -o git2r_transfer.o 2021-05-17T16:41:26.3768346Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_tree.c -o git2r_tree.o 2021-05-17T16:41:26.4922928Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o git2r.so git2r.o git2r_S3.o git2r_arg.o git2r_blame.o git2r_blob.o git2r_branch.o git2r_checkout.o git2r_clone.o git2r_commit.o git2r_config.o git2r_cred.o git2r_diff.o git2r_error.o git2r_graph.o git2r_index.o git2r_libgit2.o git2r_merge.o git2r_note.o git2r_object.o git2r_odb.o git2r_oid.o git2r_push.o git2r_reference.o git2r_reflog.o git2r_remote.o git2r_repository.o git2r_reset.o git2r_revparse.o git2r_revwalk.o git2r_signature.o git2r_stash.o git2r_status.o git2r_tag.o git2r_transfer.o git2r_tree.o -lgit2 -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:41:26.5294952Z installing to /home/runner/work/_temp/Library/00LOCK-git2r/00new/git2r/libs 2021-05-17T16:41:26.5314258Z ** R 2021-05-17T16:41:26.5520583Z ** inst 2021-05-17T16:41:26.5531440Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:41:27.5700348Z ** help 2021-05-17T16:41:27.8139504Z *** installing help indices 2021-05-17T16:41:27.9934552Z ** building package indices 2021-05-17T16:41:28.3457052Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:41:28.5338220Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:41:28.5527932Z ** testing if installed package can be loaded from final location 2021-05-17T16:41:28.7531097Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:41:28.7541990Z * DONE (git2r) 2021-05-17T16:41:28.9770083Z * installing *source* package ‘askpass’ ... 2021-05-17T16:41:28.9779970Z ** package ‘askpass’ successfully unpacked and MD5 sums checked 2021-05-17T16:41:28.9781156Z ** using staged installation 2021-05-17T16:41:28.9923829Z ** libs 2021-05-17T16:41:28.9971243Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c askpass.c -o askpass.o 2021-05-17T16:41:29.0489761Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o askpass.so askpass.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:41:29.0757490Z installing to /home/runner/work/_temp/Library/00LOCK-askpass/00new/askpass/libs 2021-05-17T16:41:29.0781836Z ** R 2021-05-17T16:41:29.0826272Z ** inst 2021-05-17T16:41:29.0836613Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:41:29.3481078Z ** help 2021-05-17T16:41:29.3662825Z *** installing help indices 2021-05-17T16:41:29.3812313Z ** building package indices 2021-05-17T16:41:29.5711523Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:41:29.7540676Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:41:29.7715869Z ** testing if installed package can be loaded from final location 2021-05-17T16:41:29.9326837Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:41:29.9332184Z * DONE (askpass) 2021-05-17T16:41:30.2840938Z * installing *source* package ‘cli’ ... 2021-05-17T16:41:30.2901357Z ** package ‘cli’ successfully unpacked and MD5 sums checked 2021-05-17T16:41:30.2903157Z ** using staged installation 2021-05-17T16:41:30.3100648Z ** R 2021-05-17T16:41:30.3380653Z ** inst 2021-05-17T16:41:30.3395393Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:41:32.9997242Z ** help 2021-05-17T16:41:33.1975164Z *** installing help indices 2021-05-17T16:41:33.3261095Z *** copying figures 2021-05-17T16:41:33.3263036Z ** building package indices 2021-05-17T16:41:33.6474601Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:41:33.8826056Z ** testing if installed package can be loaded from final location 2021-05-17T16:41:34.1709700Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:41:34.1740137Z * DONE (cli) 2021-05-17T16:41:34.5551367Z * installing *source* package ‘purrr’ ... 2021-05-17T16:41:34.5613901Z ** package ‘purrr’ successfully unpacked and MD5 sums checked 2021-05-17T16:41:34.5615080Z ** using staged installation 2021-05-17T16:41:34.5799302Z ** libs 2021-05-17T16:41:34.5855515Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c backports.c -o backports.o 2021-05-17T16:41:34.6278039Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-05-17T16:41:34.7278047Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c conditions.c -o conditions.o 2021-05-17T16:41:34.8234247Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c flatten.c -o flatten.o 2021-05-17T16:41:34.9527196Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:41:35.0038772Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c map.c -o map.o 2021-05-17T16:41:35.1366379Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pluck.c -o pluck.o 2021-05-17T16:41:35.2837433Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c transpose.c -o transpose.o 2021-05-17T16:41:35.3775394Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-17T16:41:35.4318009Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o purrr.so backports.o coerce.o conditions.o flatten.o init.o map.o pluck.o transpose.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:41:35.4563913Z installing to /home/runner/work/_temp/Library/00LOCK-purrr/00new/purrr/libs 2021-05-17T16:41:35.4569670Z ** R 2021-05-17T16:41:35.4755383Z ** inst 2021-05-17T16:41:35.4767721Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:41:36.8352498Z ** help 2021-05-17T16:41:37.0113086Z *** installing help indices 2021-05-17T16:41:37.1126598Z *** copying figures 2021-05-17T16:41:37.1133240Z ** building package indices 2021-05-17T16:41:37.4002548Z ** installing vignettes 2021-05-17T16:41:37.4081076Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:41:37.6109522Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:41:37.6299864Z ** testing if installed package can be loaded from final location 2021-05-17T16:41:37.8685778Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:41:37.8701193Z * DONE (purrr) 2021-05-17T16:41:38.1299203Z * installing *source* package ‘lifecycle’ ... 2021-05-17T16:41:38.1325574Z ** package ‘lifecycle’ successfully unpacked and MD5 sums checked 2021-05-17T16:41:38.1326832Z ** using staged installation 2021-05-17T16:41:38.1476011Z ** R 2021-05-17T16:41:38.1527409Z ** inst 2021-05-17T16:41:38.1540783Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:41:38.5882706Z ** help 2021-05-17T16:41:38.6216058Z *** installing help indices 2021-05-17T16:41:38.6469355Z *** copying figures 2021-05-17T16:41:38.6475363Z ** building package indices 2021-05-17T16:41:38.8563140Z ** installing vignettes 2021-05-17T16:41:38.8602739Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:41:39.0510958Z ** testing if installed package can be loaded from final location 2021-05-17T16:41:39.2579464Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:41:39.2588703Z * DONE (lifecycle) 2021-05-17T16:41:39.4865926Z * installing *source* package ‘cachem’ ... 2021-05-17T16:41:39.4879937Z ** package ‘cachem’ successfully unpacked and MD5 sums checked 2021-05-17T16:41:39.4881060Z ** using staged installation 2021-05-17T16:41:39.5021459Z ** libs 2021-05-17T16:41:39.5076993Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cache.c -o cache.o 2021-05-17T16:41:39.5635989Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:41:39.6092300Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o cachem.so cache.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:41:39.6293463Z installing to /home/runner/work/_temp/Library/00LOCK-cachem/00new/cachem/libs 2021-05-17T16:41:39.6307575Z ** R 2021-05-17T16:41:39.6435989Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:41:40.2401173Z ** help 2021-05-17T16:41:40.2659303Z *** installing help indices 2021-05-17T16:41:40.2883820Z ** building package indices 2021-05-17T16:41:40.4838041Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:41:40.6885914Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:41:40.7067549Z ** testing if installed package can be loaded from final location 2021-05-17T16:41:40.9165939Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:41:40.9172693Z * DONE (cachem) 2021-05-17T16:41:41.4086523Z * installing *source* package ‘openssl’ ... 2021-05-17T16:41:41.4204153Z ** package ‘openssl’ successfully unpacked and MD5 sums checked 2021-05-17T16:41:41.4205213Z ** using staged installation 2021-05-17T16:41:41.4362350Z Found pkg-config cflags and libs! 2021-05-17T16:41:41.5214785Z Using PKG_CFLAGS= 2021-05-17T16:41:41.7105460Z Using PKG_LIBS=-l:libssl.so.1.1 -l:libcrypto.so.1.1 2021-05-17T16:41:41.7269064Z ** libs 2021-05-17T16:41:41.7333057Z rm -f aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o openssl.so bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o 2021-05-17T16:41:41.7362285Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o 2021-05-17T16:41:41.8230269Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-17T16:41:41.9053246Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bignum.c -o bignum.o 2021-05-17T16:41:42.0193437Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cert.c -o cert.o 2021-05-17T16:41:42.2088090Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c compatibility.c -o compatibility.o 2021-05-17T16:41:42.2829968Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffie.c -o diffie.o 2021-05-17T16:41:42.3826902Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c envelope.c -o envelope.o 2021-05-17T16:41:42.5095818Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error.c -o error.o 2021-05-17T16:41:42.5683984Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c hash.c -o hash.o 2021-05-17T16:41:42.6711518Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c info.c -o info.o 2021-05-17T16:41:42.7393348Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keygen.c -o keygen.o 2021-05-17T16:41:42.8521951Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keys.c -o keys.o 2021-05-17T16:41:42.9885986Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c onload.c -o onload.o 2021-05-17T16:41:43.0873037Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c openssh.c -o openssh.o 2021-05-17T16:41:43.2796055Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c password.c -o password.o 2021-05-17T16:41:43.3388635Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pbkdf.c -o pbkdf.o 2021-05-17T16:41:43.3817668Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pem.c -o pem.o 2021-05-17T16:41:43.5136230Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs12.c -o pkcs12.o 2021-05-17T16:41:43.6715795Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs7.c -o pkcs7.o 2021-05-17T16:41:43.8014460Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rand.c -o rand.o 2021-05-17T16:41:43.8507669Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rsa.c -o rsa.o 2021-05-17T16:41:43.9500442Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signing.c -o signing.o 2021-05-17T16:41:44.0829551Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c ssl.c -o ssl.o 2021-05-17T16:41:44.2362556Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stream.c -o stream.o 2021-05-17T16:41:44.3662414Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write.c -o write.o 2021-05-17T16:41:44.5025046Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c x25519.c -o x25519.o 2021-05-17T16:41:44.6326494Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bcrypt/bcrypt_pbkdf.c -o bcrypt/bcrypt_pbkdf.o 2021-05-17T16:41:44.7066366Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bcrypt/blowfish.c -o bcrypt/blowfish.o 2021-05-17T16:41:44.8941524Z ar rcs bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o 2021-05-17T16:41:44.8996886Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o openssl.so aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o -Lbcrypt -lstatbcrypt -l:libssl.so.1.1 -l:libcrypto.so.1.1 -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:41:44.9603985Z installing to /home/runner/work/_temp/Library/00LOCK-openssl/00new/openssl/libs 2021-05-17T16:41:44.9605488Z ** R 2021-05-17T16:41:44.9712464Z ** inst 2021-05-17T16:41:44.9763062Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:41:45.9642122Z ** help 2021-05-17T16:41:46.0193178Z *** installing help indices 2021-05-17T16:41:46.0613714Z ** building package indices 2021-05-17T16:41:46.2792139Z ** installing vignettes 2021-05-17T16:41:46.2956562Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:41:46.4922224Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:41:46.5115237Z ** testing if installed package can be loaded from final location 2021-05-17T16:41:46.7180957Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:41:46.7194571Z * DONE (openssl) 2021-05-17T16:41:46.9409724Z * installing *source* package ‘memoise’ ... 2021-05-17T16:41:46.9422387Z ** package ‘memoise’ successfully unpacked and MD5 sums checked 2021-05-17T16:41:46.9425574Z ** using staged installation 2021-05-17T16:41:46.9581517Z ** R 2021-05-17T16:41:46.9671474Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:41:47.3996001Z ** help 2021-05-17T16:41:47.4270950Z *** installing help indices 2021-05-17T16:41:47.4531069Z ** building package indices 2021-05-17T16:41:47.6565981Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:41:47.8532976Z ** testing if installed package can be loaded from final location 2021-05-17T16:41:48.0499386Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:41:48.0505100Z * DONE (memoise) 2021-05-17T16:41:48.3924846Z * installing *source* package ‘httr’ ... 2021-05-17T16:41:48.3979138Z ** package ‘httr’ successfully unpacked and MD5 sums checked 2021-05-17T16:41:48.3984411Z ** using staged installation 2021-05-17T16:41:48.4153546Z ** R 2021-05-17T16:41:48.4344473Z ** demo 2021-05-17T16:41:48.4359914Z ** inst 2021-05-17T16:41:48.4377584Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:41:51.1722857Z ** help 2021-05-17T16:41:51.3290097Z *** installing help indices 2021-05-17T16:41:51.4316473Z ** building package indices 2021-05-17T16:41:51.7183620Z ** installing vignettes 2021-05-17T16:41:51.7253795Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:41:51.9067519Z ** testing if installed package can be loaded from final location 2021-05-17T16:41:52.1426860Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:41:52.1451011Z * DONE (httr) 2021-05-17T16:41:52.3905933Z * installing *source* package ‘credentials’ ... 2021-05-17T16:41:52.3922144Z ** package ‘credentials’ successfully unpacked and MD5 sums checked 2021-05-17T16:41:52.3923662Z ** using staged installation 2021-05-17T16:41:52.4073059Z ** R 2021-05-17T16:41:52.4121136Z ** inst 2021-05-17T16:41:52.4134158Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:41:52.8785201Z ** help 2021-05-17T16:41:52.8982744Z *** installing help indices 2021-05-17T16:41:52.9200564Z ** building package indices 2021-05-17T16:41:53.1123391Z ** installing vignettes 2021-05-17T16:41:53.1175418Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:41:53.3903289Z ** testing if installed package can be loaded from final location 2021-05-17T16:41:53.6587629Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:41:53.6594458Z * DONE (credentials) 2021-05-17T16:41:53.8959338Z * installing *source* package ‘gh’ ... 2021-05-17T16:41:53.8980422Z ** package ‘gh’ successfully unpacked and MD5 sums checked 2021-05-17T16:41:53.8981807Z ** using staged installation 2021-05-17T16:41:53.9140524Z ** R 2021-05-17T16:41:53.9226667Z ** inst 2021-05-17T16:41:53.9238247Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:41:54.9902814Z ** help 2021-05-17T16:41:55.0210971Z *** installing help indices 2021-05-17T16:41:55.0538279Z ** building package indices 2021-05-17T16:41:55.2526144Z ** installing vignettes 2021-05-17T16:41:55.2582283Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:41:55.5017046Z ** testing if installed package can be loaded from final location 2021-05-17T16:41:55.7588475Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:41:55.7599755Z * DONE (gh) 2021-05-17T16:41:56.0307333Z * installing *source* package ‘gert’ ... 2021-05-17T16:41:56.0330893Z ** package ‘gert’ successfully unpacked and MD5 sums checked 2021-05-17T16:41:56.0331895Z ** using staged installation 2021-05-17T16:41:56.0424110Z Found pkg-config cflags and libs! 2021-05-17T16:41:56.1278522Z Using PKG_CFLAGS= 2021-05-17T16:41:56.1279969Z Using PKG_LIBS=-lgit2 2021-05-17T16:41:56.1721509Z Configuration OK! 2021-05-17T16:41:56.1887673Z ** libs 2021-05-17T16:41:56.1938318Z rm -f gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o 2021-05-17T16:41:56.1963568Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c branch.c -o branch.o 2021-05-17T16:41:56.4116029Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c clone.c -o clone.o 2021-05-17T16:41:56.6525227Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c commit.c -o commit.o 2021-05-17T16:41:56.8890359Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c config.c -o config.o 2021-05-17T16:41:56.9844361Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c conflicts.c -o conflicts.o 2021-05-17T16:41:57.0649926Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c files.c -o files.o 2021-05-17T16:41:57.2241678Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:41:57.2879012Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c merge.c -o merge.o 2021-05-17T16:41:57.3943365Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rebase.c -o rebase.o 2021-05-17T16:41:57.5109263Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c stash.c -o stash.o 2021-05-17T16:41:57.6037433Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c submodules.c -o submodules.o 2021-05-17T16:41:57.7199961Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c tag.c -o tag.o 2021-05-17T16:41:57.8022412Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-17T16:41:57.9225034Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-17T16:41:58.0016550Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o -lgit2 -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:41:58.0324003Z installing to /home/runner/work/_temp/Library/00LOCK-gert/00new/gert/libs 2021-05-17T16:41:58.0327935Z ** R 2021-05-17T16:41:58.0428156Z ** inst 2021-05-17T16:41:58.0439725Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:41:58.8002763Z ** help 2021-05-17T16:41:58.8600654Z *** installing help indices 2021-05-17T16:41:58.9036069Z ** building package indices 2021-05-17T16:41:59.1286840Z ** installing vignettes 2021-05-17T16:41:59.1390685Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:41:59.3588118Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:41:59.3764424Z ** testing if installed package can be loaded from final location 2021-05-17T16:41:59.6045108Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:41:59.6055973Z * DONE (gert) 2021-05-17T16:42:00.0441358Z * installing *source* package ‘usethis’ ... 2021-05-17T16:42:00.0517116Z ** package ‘usethis’ successfully unpacked and MD5 sums checked 2021-05-17T16:42:00.0518033Z ** using staged installation 2021-05-17T16:42:00.0778868Z ** R 2021-05-17T16:42:00.1135363Z ** inst 2021-05-17T16:42:00.1167312Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:42:02.9291986Z ** help 2021-05-17T16:42:03.1284208Z *** installing help indices 2021-05-17T16:42:03.2771405Z *** copying figures 2021-05-17T16:42:03.2783358Z ** building package indices 2021-05-17T16:42:03.6033727Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:42:03.9109767Z ** testing if installed package can be loaded from final location 2021-05-17T16:42:04.2619973Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:42:04.2648899Z * DONE (usethis) 2021-05-17T16:42:04.2767037Z 2021-05-17T16:42:04.2767917Z The downloaded source packages are in 2021-05-17T16:42:04.2769436Z ‘/tmp/RtmpBWcGqC/downloaded_packages’ 2021-05-17T16:42:04.2770189Z Running `R CMD build`... 2021-05-17T16:42:06.5231385Z * checking for file ‘/tmp/RtmpBWcGqC/remotes724b5d35cd8e/ropensci-tic-3b4dfb8/DESCRIPTION’ ... OK 2021-05-17T16:42:06.5233028Z * preparing ‘tic’: 2021-05-17T16:42:06.5235147Z * checking DESCRIPTION meta-information ... OK 2021-05-17T16:42:06.5236010Z * installing the package to process help pages 2021-05-17T16:42:06.5237328Z * checking for LF line-endings in source and make files and shell scripts 2021-05-17T16:42:06.5238406Z * checking for empty or unneeded directories 2021-05-17T16:42:06.5239535Z Removed empty directory ‘tic/.circleci’ 2021-05-17T16:42:06.5240423Z Removed empty directory ‘tic/pkgdown’ 2021-05-17T16:42:06.5241240Z * building ‘tic_0.10.0.tar.gz’ 2021-05-17T16:42:06.5243502Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:42:06.5244502Z (as ‘lib’ is unspecified) 2021-05-17T16:42:06.9041485Z * installing *source* package ‘tic’ ... 2021-05-17T16:42:06.9067715Z ** using staged installation 2021-05-17T16:42:06.9347770Z ** R 2021-05-17T16:42:06.9569017Z ** inst 2021-05-17T16:42:06.9606730Z ** preparing package for lazy loading 2021-05-17T16:42:07.3564845Z ** help 2021-05-17T16:42:07.5333601Z *** installing help indices 2021-05-17T16:42:07.6481570Z *** copying figures 2021-05-17T16:42:07.6487146Z ** building package indices 2021-05-17T16:42:07.9449143Z ** installing vignettes 2021-05-17T16:42:07.9497709Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:42:08.2274922Z ** testing if installed package can be loaded from final location 2021-05-17T16:42:08.5515226Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:42:08.5548567Z * DONE (tic) 2021-05-17T16:42:08.5696260Z Using github PAT from envvar GITHUB_PAT 2021-05-17T16:42:08.9186507Z Downloading GitHub repo muschellij2/ghtravis@HEAD 2021-05-17T16:42:10.1842323Z desc (1.3.0 -> 7be86f2f7...) [GitHub] 2021-05-17T16:42:10.1843888Z utf8 (NA -> 1.2.1 ) [CRAN] 2021-05-17T16:42:10.1845846Z Installing 37 packages: utf8, vctrs, pkgconfig, pillar, tibble, rematch2, fansi, diffobj, waldo, ps, processx, praise, pkgload, evaluate, ellipsis, digest, callr, brio, xml2, xfun, markdown, highr, stringr, stringi, Rcpp, knitr, commonmark, brew, xopen, sessioninfo, prettyunits, pkgbuild, testthat, rversions, roxygen2, rcmdcheck, devtools 2021-05-17T16:42:10.1847996Z vctrs (NA -> 0.3.8 ) [CRAN] 2021-05-17T16:42:10.1848887Z pkgconfig (NA -> 2.0.3 ) [CRAN] 2021-05-17T16:42:10.1849798Z pillar (NA -> 1.6.1 ) [CRAN] 2021-05-17T16:42:10.1851297Z tibble (NA -> 3.1.2 ) [CRAN] 2021-05-17T16:42:10.1852329Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:42:10.1853405Z (as ‘lib’ is unspecified) 2021-05-17T16:42:10.1854564Z rematch2 (NA -> 2.1.2 ) [CRAN] 2021-05-17T16:42:10.1855416Z fansi (NA -> 0.4.2 ) [CRAN] 2021-05-17T16:42:10.1856274Z diffobj (NA -> 0.3.4 ) [CRAN] 2021-05-17T16:42:10.1857111Z waldo (NA -> 0.2.5 ) [CRAN] 2021-05-17T16:42:10.1857925Z ps (NA -> 1.6.0 ) [CRAN] 2021-05-17T16:42:10.1858778Z processx (NA -> 3.5.2 ) [CRAN] 2021-05-17T16:42:10.1860118Z praise (NA -> 1.0.0 ) [CRAN] 2021-05-17T16:42:10.1861177Z pkgload (NA -> 1.2.1 ) [CRAN] 2021-05-17T16:42:10.1861984Z evaluate (NA -> 0.14 ) [CRAN] 2021-05-17T16:42:10.1862965Z ellipsis (NA -> 0.3.2 ) [CRAN] 2021-05-17T16:42:10.1863754Z digest (NA -> 0.6.27 ) [CRAN] 2021-05-17T16:42:10.1864712Z callr (NA -> 3.7.0 ) [CRAN] 2021-05-17T16:42:10.1865459Z brio (NA -> 1.1.2 ) [CRAN] 2021-05-17T16:42:10.1866347Z xml2 (NA -> 1.3.2 ) [CRAN] 2021-05-17T16:42:10.1867084Z xfun (NA -> 0.23 ) [CRAN] 2021-05-17T16:42:10.1867831Z markdown (NA -> 1.1 ) [CRAN] 2021-05-17T16:42:10.1868641Z highr (NA -> 0.9 ) [CRAN] 2021-05-17T16:42:10.1869398Z stringr (NA -> 1.4.0 ) [CRAN] 2021-05-17T16:42:10.1870146Z stringi (NA -> 1.6.2 ) [CRAN] 2021-05-17T16:42:10.1870869Z Rcpp (NA -> 1.0.6 ) [CRAN] 2021-05-17T16:42:10.1871609Z knitr (NA -> 1.33 ) [CRAN] 2021-05-17T16:42:10.1872554Z commonmark (NA -> 1.7 ) [CRAN] 2021-05-17T16:42:10.1873313Z brew (NA -> 1.0-6 ) [CRAN] 2021-05-17T16:42:10.1874272Z xopen (NA -> 1.0.0 ) [CRAN] 2021-05-17T16:42:10.1875075Z sessioninfo (NA -> 1.1.1 ) [CRAN] 2021-05-17T16:42:10.1876050Z prettyunits (NA -> 1.1.1 ) [CRAN] 2021-05-17T16:42:10.1876858Z pkgbuild (NA -> 1.2.0 ) [CRAN] 2021-05-17T16:42:10.1877934Z testthat (NA -> 3.0.2 ) [CRAN] 2021-05-17T16:42:10.1878761Z rversions (NA -> 2.0.2 ) [CRAN] 2021-05-17T16:42:10.1879540Z roxygen2 (NA -> 7.1.1 ) [CRAN] 2021-05-17T16:42:10.1880306Z rcmdcheck (NA -> 1.3.3 ) [CRAN] 2021-05-17T16:42:10.1881054Z devtools (NA -> 2.4.1 ) [CRAN] 2021-05-17T16:42:25.8560710Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/utf8_1.2.1.tar.gz' 2021-05-17T16:42:26.5421841Z Content type 'binary/octet-stream' length 237667 bytes (232 KB) 2021-05-17T16:42:26.5566217Z ================================================== 2021-05-17T16:42:26.5567036Z downloaded 232 KB 2021-05-17T16:42:26.5567455Z 2021-05-17T16:42:26.5604885Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/vctrs_0.3.8.tar.gz' 2021-05-17T16:42:27.2437367Z Content type 'binary/octet-stream' length 784938 bytes (766 KB) 2021-05-17T16:42:27.2668146Z ================================================== 2021-05-17T16:42:27.2668975Z downloaded 766 KB 2021-05-17T16:42:27.2669462Z 2021-05-17T16:42:27.2704850Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgconfig_2.0.3.tar.gz' 2021-05-17T16:42:27.9602225Z Content type 'application/x-tar' length 6108 bytes 2021-05-17T16:42:27.9604310Z ================================================== 2021-05-17T16:42:27.9605029Z downloaded 6108 bytes 2021-05-17T16:42:27.9605549Z 2021-05-17T16:42:27.9634868Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pillar_1.6.1.tar.gz' 2021-05-17T16:42:28.6467527Z Content type 'binary/octet-stream' length 1114809 bytes (1.1 MB) 2021-05-17T16:42:28.6827297Z ================================================== 2021-05-17T16:42:28.6828507Z downloaded 1.1 MB 2021-05-17T16:42:28.6829169Z 2021-05-17T16:42:28.6860415Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tibble_3.1.2.tar.gz' 2021-05-17T16:42:29.3708898Z Content type 'binary/octet-stream' length 689638 bytes (673 KB) 2021-05-17T16:42:29.3937350Z ================================================== 2021-05-17T16:42:29.3938228Z downloaded 673 KB 2021-05-17T16:42:29.3938713Z 2021-05-17T16:42:29.3972854Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rematch2_2.1.2.tar.gz' 2021-05-17T16:42:30.0826764Z Content type 'binary/octet-stream' length 13441 bytes (13 KB) 2021-05-17T16:42:30.0827390Z ================================================== 2021-05-17T16:42:30.0827800Z downloaded 13 KB 2021-05-17T16:42:30.0828065Z 2021-05-17T16:42:30.0860929Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fansi_0.4.2.tar.gz' 2021-05-17T16:42:30.7602659Z Content type 'binary/octet-stream' length 270970 bytes (264 KB) 2021-05-17T16:42:30.7747821Z ================================================== 2021-05-17T16:42:30.7748728Z downloaded 264 KB 2021-05-17T16:42:30.7749387Z 2021-05-17T16:42:30.7781194Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/diffobj_0.3.4.tar.gz' 2021-05-17T16:42:31.4628567Z Content type 'binary/octet-stream' length 476003 bytes (464 KB) 2021-05-17T16:42:31.4825074Z ================================================== 2021-05-17T16:42:31.4825547Z downloaded 464 KB 2021-05-17T16:42:31.4825811Z 2021-05-17T16:42:31.4861779Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/waldo_0.2.5.tar.gz' 2021-05-17T16:42:32.1805213Z Content type 'binary/octet-stream' length 26261 bytes (25 KB) 2021-05-17T16:42:32.1809647Z ================================================== 2021-05-17T16:42:32.1810157Z downloaded 25 KB 2021-05-17T16:42:32.1810411Z 2021-05-17T16:42:32.1844252Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ps_1.6.0.tar.gz' 2021-05-17T16:42:32.8861292Z Content type 'binary/octet-stream' length 120042 bytes (117 KB) 2021-05-17T16:42:32.8959824Z ================================================== 2021-05-17T16:42:32.8960519Z downloaded 117 KB 2021-05-17T16:42:32.8960980Z 2021-05-17T16:42:32.8993665Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/processx_3.5.2.tar.gz' 2021-05-17T16:42:33.5778363Z Content type 'binary/octet-stream' length 141949 bytes (138 KB) 2021-05-17T16:42:33.5879111Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/evaluate_0.14.tar.gz' 2021-05-17T16:42:35.6517646Z Content type 'application/x-tar' length 23661 bytes (23 KB) 2021-05-17T16:42:35.6519102Z ================================================== 2021-05-17T16:42:35.6519881Z downloaded 23 KB 2021-05-17T16:42:35.6520201Z 2021-05-17T16:42:35.6551830Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ellipsis_0.3.2.tar.gz' 2021-05-17T16:42:36.1691912Z Content type 'binary/octet-stream' length 8130 bytes 2021-05-17T16:42:36.1692584Z ================================================== 2021-05-17T16:42:36.1693213Z downloaded 8130 bytes 2021-05-17T16:42:36.1693482Z 2021-05-17T16:42:36.1732134Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/digest_0.6.27.tar.gz' 2021-05-17T16:42:36.8609043Z Content type 'binary/octet-stream' length 164442 bytes (160 KB) 2021-05-17T16:42:36.8724530Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xml2_1.3.2.tar.gz' 2021-05-17T16:42:38.5934650Z Content type 'binary/octet-stream' length 272736 bytes (266 KB) 2021-05-17T16:42:38.6091911Z ================================================== 2021-05-17T16:42:38.6092520Z downloaded 266 KB 2021-05-17T16:42:38.6092878Z 2021-05-17T16:42:38.6124636Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xfun_0.23.tar.gz' 2021-05-17T16:42:39.3029609Z Content type 'binary/octet-stream' length 111996 bytes (109 KB) 2021-05-17T16:42:39.3127659Z ================================================== 2021-05-17T16:42:39.3128334Z downloaded 109 KB 2021-05-17T16:42:39.3128727Z 2021-05-17T16:42:39.3167396Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/markdown_1.1.tar.gz' 2021-05-17T16:42:39.9959591Z Content type 'application/x-tar' length 81636 bytes (79 KB) 2021-05-17T16:42:40.0016012Z 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2021-05-17T16:42:41.1440245Z Content type 'application/x-gzip' length 7575370 bytes (7.2 MB) 2021-05-17T16:42:41.3532871Z ================================================== 2021-05-17T16:42:41.3533701Z downloaded 7.2 MB 2021-05-17T16:42:41.3534343Z 2021-05-17T16:42:41.3560453Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/Rcpp_1.0.6.tar.gz' 2021-05-17T16:42:42.0409743Z Content type 'binary/octet-stream' length 2954251 bytes (2.8 MB) 2021-05-17T16:42:42.0986539Z ================================================== 2021-05-17T16:42:42.0987421Z downloaded 2.8 MB 2021-05-17T16:42:42.0988297Z 2021-05-17T16:42:42.1019281Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/knitr_1.33.tar.gz' 2021-05-17T16:42:42.7778648Z Content type 'binary/octet-stream' length 890176 bytes (869 KB) 2021-05-17T16:42:42.8032635Z ================================================== 2021-05-17T16:42:42.8033561Z downloaded 869 KB 2021-05-17T16:42:42.8034062Z 2021-05-17T16:42:42.8064612Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/commonmark_1.7.tar.gz' 2021-05-17T16:42:43.4818942Z Content type 'application/x-tar' length 134376 bytes (131 KB) 2021-05-17T16:42:43.4914675Z ================================================== 2021-05-17T16:42:43.4915447Z downloaded 131 KB 2021-05-17T16:42:43.4916007Z 2021-05-17T16:42:43.4948763Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brew_1.0-6.tar.gz' 2021-05-17T16:42:44.1925712Z Content type 'application/x-tar' length 83765 bytes (81 KB) 2021-05-17T16:42:44.1982581Z ================================================== 2021-05-17T16:42:44.1983034Z downloaded 81 KB 2021-05-17T16:42:44.1983295Z 2021-05-17T16:42:44.2017724Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xopen_1.0.0.tar.gz' 2021-05-17T16:42:44.8921412Z Content type 'application/x-tar' length 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgbuild_1.2.0.tar.gz' 2021-05-17T16:42:46.7760700Z Content type 'binary/octet-stream' length 30622 bytes (29 KB) 2021-05-17T16:42:46.7768822Z ================================================== 2021-05-17T16:42:46.7769263Z downloaded 29 KB 2021-05-17T16:42:46.7769491Z 2021-05-17T16:42:46.7805298Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/testthat_3.0.2.tar.gz' 2021-05-17T16:42:47.4637661Z Content type 'binary/octet-stream' length 678280 bytes (662 KB) 2021-05-17T16:42:47.4863223Z ================================================== 2021-05-17T16:42:47.4863736Z downloaded 662 KB 2021-05-17T16:42:47.4864000Z 2021-05-17T16:42:47.4902243Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rversions_2.0.2.tar.gz' 2021-05-17T16:42:48.0127010Z Content type 'binary/octet-stream' length 40913 bytes (39 KB) 2021-05-17T16:42:48.0174295Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/devtools_2.4.1.tar.gz' 2021-05-17T16:42:49.7887267Z Content type 'binary/octet-stream' length 370450 bytes (361 KB) 2021-05-17T16:42:49.8072437Z ================================================== 2021-05-17T16:42:49.8072873Z downloaded 361 KB 2021-05-17T16:42:49.8073306Z 2021-05-17T16:42:50.1459691Z * installing *source* package ‘utf8’ ... 2021-05-17T16:42:50.1524275Z ** package ‘utf8’ successfully unpacked and MD5 sums checked 2021-05-17T16:42:50.1526511Z ** using staged installation 2021-05-17T16:42:50.1683332Z ** libs 2021-05-17T16:42:50.1738044Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c as_utf8.c -o as_utf8.o 2021-05-17T16:42:50.2489019Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c bytes.c -o bytes.o 2021-05-17T16:42:50.4083821Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c context.c -o context.o 2021-05-17T16:42:50.4757754Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:42:50.5196232Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c render.c -o render.o 2021-05-17T16:42:50.5889136Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c render_table.c -o render_table.o 2021-05-17T16:42:50.7598780Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c string.c -o string.o 2021-05-17T16:42:50.8242813Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c text.c -o text.o 2021-05-17T16:42:50.9530168Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_encode.c -o utf8_encode.o 2021-05-17T16:42:51.0432076Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_format.c -o utf8_format.o 2021-05-17T16:42:51.1389867Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_normalize.c -o utf8_normalize.o 2021-05-17T16:42:51.2086605Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_valid.c -o utf8_valid.o 2021-05-17T16:42:51.2669310Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_width.c -o utf8_width.o 2021-05-17T16:42:51.3287191Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c util.c -o util.o 2021-05-17T16:42:51.3863694Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/array.c -o utf8lite/src/array.o 2021-05-17T16:42:51.4402881Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/char.c -o utf8lite/src/char.o 2021-05-17T16:42:51.5070238Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/encode.c -o utf8lite/src/encode.o 2021-05-17T16:42:51.5638290Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/error.c -o utf8lite/src/error.o 2021-05-17T16:42:51.6017841Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/escape.c -o utf8lite/src/escape.o 2021-05-17T16:42:51.6685339Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/graph.c -o utf8lite/src/graph.o 2021-05-17T16:42:51.7125492Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o 2021-05-17T16:42:51.9162047Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o 2021-05-17T16:42:52.2249432Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/render.c -o utf8lite/src/render.o 2021-05-17T16:42:52.4091538Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/text.c -o utf8lite/src/text.o 2021-05-17T16:42:52.4825312Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o 2021-05-17T16:42:52.5451245Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o 2021-05-17T16:42:52.6213919Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o 2021-05-17T16:42:52.6949076Z ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o 2021-05-17T16:42:52.7027349Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:42:52.7364737Z installing to /home/runner/work/_temp/Library/00LOCK-utf8/00new/utf8/libs 2021-05-17T16:42:52.7365918Z ** R 2021-05-17T16:42:52.7454346Z ** inst 2021-05-17T16:42:52.7466705Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:42:53.2372190Z ** help 2021-05-17T16:42:53.2680632Z *** installing help indices 2021-05-17T16:42:53.2936631Z ** building package indices 2021-05-17T16:42:53.4913584Z ** installing vignettes 2021-05-17T16:42:53.4967576Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:42:53.6823914Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:42:53.6998494Z ** testing if installed package can be loaded from final location 2021-05-17T16:42:53.8854178Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:42:53.8898892Z * DONE (utf8) 2021-05-17T16:42:54.1077040Z * installing *source* package ‘pkgconfig’ ... 2021-05-17T16:42:54.1089157Z ** package ‘pkgconfig’ successfully unpacked and MD5 sums checked 2021-05-17T16:42:54.1091569Z ** using staged installation 2021-05-17T16:42:54.1214369Z ** R 2021-05-17T16:42:54.1243636Z ** inst 2021-05-17T16:42:54.1253891Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:42:54.3602766Z ** help 2021-05-17T16:42:54.3797893Z *** installing help indices 2021-05-17T16:42:54.3966794Z ** building package indices 2021-05-17T16:42:54.5863054Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:42:54.7615519Z ** testing if installed package can be loaded from final location 2021-05-17T16:42:54.9353556Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:42:54.9358115Z * DONE (pkgconfig) 2021-05-17T16:42:55.2138581Z * installing *source* package ‘fansi’ ... 2021-05-17T16:42:55.2173156Z ** package ‘fansi’ successfully unpacked and MD5 sums checked 2021-05-17T16:42:55.2174852Z ** using staged installation 2021-05-17T16:42:55.2317305Z ** libs 2021-05-17T16:42:55.2394577Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c assumptions.c -o assumptions.o 2021-05-17T16:42:55.2782103Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c has.c -o has.o 2021-05-17T16:42:55.3372836Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:42:55.3843020Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c nchar.c -o nchar.o 2021-05-17T16:42:55.4569674Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read.c -o read.o 2021-05-17T16:42:55.9153384Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rnchar.c -o rnchar.o 2021-05-17T16:42:55.9544036Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c state.c -o state.o 2021-05-17T16:42:56.3547316Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c strip.c -o strip.o 2021-05-17T16:42:56.5000766Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c strsplit.c -o strsplit.o 2021-05-17T16:42:56.5452673Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c tabs.c -o tabs.o 2021-05-17T16:42:56.6755189Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c tohtml.c -o tohtml.o 2021-05-17T16:42:56.9315784Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unhandled.c -o unhandled.o 2021-05-17T16:42:57.0374952Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unique.c -o unique.o 2021-05-17T16:42:57.1010846Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-17T16:42:57.1643241Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-17T16:42:57.3427947Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c wrap.c -o wrap.o 2021-05-17T16:42:57.6661080Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fansi.so assumptions.o has.o init.o nchar.o read.o rnchar.o state.o strip.o strsplit.o tabs.o tohtml.o unhandled.o unique.o utf8.o utils.o wrap.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:42:57.6963033Z installing to /home/runner/work/_temp/Library/00LOCK-fansi/00new/fansi/libs 2021-05-17T16:42:57.6964058Z ** R 2021-05-17T16:42:57.7057648Z ** inst 2021-05-17T16:42:57.7065930Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:42:58.3394611Z ** help 2021-05-17T16:42:58.4054916Z *** installing help indices 2021-05-17T16:42:58.4449347Z ** building package indices 2021-05-17T16:42:58.6722876Z ** installing vignettes 2021-05-17T16:42:58.6777000Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:42:58.8553899Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:42:58.8738808Z ** testing if installed package can be loaded from final location 2021-05-17T16:42:59.0631780Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:42:59.0640582Z * DONE (fansi) 2021-05-17T16:42:59.5202672Z * installing *source* package ‘diffobj’ ... 2021-05-17T16:42:59.5296188Z ** package ‘diffobj’ successfully unpacked and MD5 sums checked 2021-05-17T16:42:59.5298721Z ** using staged installation 2021-05-17T16:42:59.5459504Z ** libs 2021-05-17T16:42:59.5507468Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diff.c -o diff.o 2021-05-17T16:42:59.7689106Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffobj.c -o diffobj.o 2021-05-17T16:42:59.8325313Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:42:59.8823175Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o diffobj.so diff.o diffobj.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:42:59.9044130Z installing to /home/runner/work/_temp/Library/00LOCK-diffobj/00new/diffobj/libs 2021-05-17T16:42:59.9055365Z ** R 2021-05-17T16:42:59.9480991Z ** inst 2021-05-17T16:42:59.9498655Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:43:06.8121405Z ** help 2021-05-17T16:43:07.0074591Z *** installing help indices 2021-05-17T16:43:07.1436404Z ** building package indices 2021-05-17T16:43:07.4249199Z ** installing vignettes 2021-05-17T16:43:07.4320765Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:43:07.7325430Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:43:07.7503539Z ** testing if installed package can be loaded from final location 2021-05-17T16:43:08.1384843Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:43:08.1426541Z * DONE (diffobj) 2021-05-17T16:43:08.4376815Z * installing *source* package ‘ps’ ... 2021-05-17T16:43:08.4413465Z ** package ‘ps’ successfully unpacked and MD5 sums checked 2021-05-17T16:43:08.4414497Z ** using staged installation 2021-05-17T16:43:08.6346780Z ** libs 2021-05-17T16:43:08.6401359Z gcc -g -O2 -Wall px.c -o px 2021-05-17T16:43:08.7710868Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:43:08.8346530Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-common.c -o api-common.o 2021-05-17T16:43:08.9005537Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c common.c -o common.o 2021-05-17T16:43:08.9674114Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c extra.c -o extra.o 2021-05-17T16:43:09.1326661Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dummy.c -o dummy.o 2021-05-17T16:43:09.1866789Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error-codes.c -o error-codes.o 2021-05-17T16:43:09.4642379Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c posix.c -o posix.o 2021-05-17T16:43:09.6448177Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-posix.c -o api-posix.o 2021-05-17T16:43:09.7588160Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c linux.c -o linux.o 2021-05-17T16:43:09.8783908Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-linux.c -o api-linux.o 2021-05-17T16:43:10.3493975Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o ps.so init.o api-common.o common.o extra.o dummy.o error-codes.o posix.o api-posix.o linux.o api-linux.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:43:10.3767595Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-ps/00new/ps 2021-05-17T16:43:10.3805851Z ** R 2021-05-17T16:43:10.3923055Z ** inst 2021-05-17T16:43:10.3936640Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:43:11.3973754Z ** help 2021-05-17T16:43:11.5443834Z *** installing help indices 2021-05-17T16:43:11.6406349Z ** building package indices 2021-05-17T16:43:11.9282728Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:43:12.1215038Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:43:12.1403913Z ** testing if installed package can be loaded from final location 2021-05-17T16:43:12.3450556Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:43:12.3462635Z * DONE (ps) 2021-05-17T16:43:12.5656674Z * installing *source* package ‘praise’ ... 2021-05-17T16:43:12.5669126Z ** package ‘praise’ successfully unpacked and MD5 sums checked 2021-05-17T16:43:12.5670428Z ** using staged installation 2021-05-17T16:43:12.5791318Z ** R 2021-05-17T16:43:12.5835365Z ** inst 2021-05-17T16:43:12.5847083Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:43:12.8146438Z ** help 2021-05-17T16:43:12.8271531Z *** installing help indices 2021-05-17T16:43:12.8495071Z ** building package indices 2021-05-17T16:43:13.0438612Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:43:13.2244157Z ** testing if installed package can be loaded from final location 2021-05-17T16:43:13.3997872Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:43:13.4003454Z * DONE (praise) 2021-05-17T16:43:13.7426370Z * installing *source* package ‘pkgload’ ... 2021-05-17T16:43:13.7469966Z ** package ‘pkgload’ successfully unpacked and MD5 sums checked 2021-05-17T16:43:13.7471812Z ** using staged installation 2021-05-17T16:43:13.7635490Z ** R 2021-05-17T16:43:13.7755328Z ** inst 2021-05-17T16:43:13.7764559Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:43:14.6702871Z ** help 2021-05-17T16:43:14.7274289Z *** installing help indices 2021-05-17T16:43:14.7757370Z ** building package indices 2021-05-17T16:43:15.0080880Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:43:15.5119194Z ** testing if installed package can be loaded from final location 2021-05-17T16:43:16.0379228Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:43:16.0388013Z * DONE (pkgload) 2021-05-17T16:43:16.2964606Z * installing *source* package ‘evaluate’ ... 2021-05-17T16:43:16.2983586Z ** package ‘evaluate’ successfully unpacked and MD5 sums checked 2021-05-17T16:43:16.2985784Z ** using staged installation 2021-05-17T16:43:16.3144248Z ** R 2021-05-17T16:43:16.3206031Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:43:16.8246431Z ** help 2021-05-17T16:43:16.8564164Z *** installing help indices 2021-05-17T16:43:16.8922345Z ** building package indices 2021-05-17T16:43:17.0980884Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:43:17.2822694Z ** testing if installed package can be loaded from final location 2021-05-17T16:43:17.4619333Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:43:17.4627160Z * DONE (evaluate) 2021-05-17T16:43:17.6835351Z * installing *source* package ‘ellipsis’ ... 2021-05-17T16:43:17.6845909Z ** package ‘ellipsis’ successfully unpacked and MD5 sums checked 2021-05-17T16:43:17.6847085Z ** using staged installation 2021-05-17T16:43:17.6996400Z ** libs 2021-05-17T16:43:17.7043285Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dots.c -o dots.o 2021-05-17T16:43:17.7781148Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:43:17.8240775Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o ellipsis.so dots.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:43:17.8448400Z installing to /home/runner/work/_temp/Library/00LOCK-ellipsis/00new/ellipsis/libs 2021-05-17T16:43:17.8462305Z ** R 2021-05-17T16:43:17.8496953Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:43:18.1158891Z ** help 2021-05-17T16:43:18.1408983Z *** installing help indices 2021-05-17T16:43:18.1611375Z ** building package indices 2021-05-17T16:43:18.3543826Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:43:18.5542901Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:43:18.5718555Z ** testing if installed package can be loaded from final location 2021-05-17T16:43:18.7675743Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:43:18.7682048Z * DONE (ellipsis) 2021-05-17T16:43:19.0443199Z * installing *source* package ‘digest’ ... 2021-05-17T16:43:19.0471197Z ** package ‘digest’ successfully unpacked and MD5 sums checked 2021-05-17T16:43:19.0472137Z ** using staged installation 2021-05-17T16:43:19.0588307Z ** libs 2021-05-17T16:43:19.0647050Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c SpookyV2.cpp -o SpookyV2.o 2021-05-17T16:43:19.2484292Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o 2021-05-17T16:43:19.5692269Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3.c -o blake3.o 2021-05-17T16:43:20.4418758Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3_dispatch.c -o blake3_dispatch.o 2021-05-17T16:43:20.7080688Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3_portable.c -o blake3_portable.o 2021-05-17T16:43:21.2940802Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c crc32.c -o crc32.o 2021-05-17T16:43:21.3713710Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest.c -o digest.o 2021-05-17T16:43:21.6044345Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest2int.c -o digest2int.o 2021-05-17T16:43:21.6654407Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:43:21.6882953Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c md5.c -o md5.o 2021-05-17T16:43:21.8391590Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pmurhash.c -o pmurhash.o 2021-05-17T16:43:21.8905094Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c raes.c -o raes.o 2021-05-17T16:43:21.9662618Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha1.c -o sha1.o 2021-05-17T16:43:22.2822301Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha2.c -o sha2.o 2021-05-17T16:43:22.4038342Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha256.c -o sha256.o 2021-05-17T16:43:22.9762669Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c spooky_serialize.cpp -o spooky_serialize.o 2021-05-17T16:43:23.1175192Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c xxhash.c -o xxhash.o 2021-05-17T16:43:23.3704951Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o digest.so SpookyV2.o aes.o blake3.o blake3_dispatch.o blake3_portable.o crc32.o digest.o digest2int.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o spooky_serialize.o xxhash.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:43:23.4105994Z installing to /home/runner/work/_temp/Library/00LOCK-digest/00new/digest/libs 2021-05-17T16:43:23.4127297Z ** R 2021-05-17T16:43:23.4187981Z ** demo 2021-05-17T16:43:23.4196209Z ** inst 2021-05-17T16:43:23.4215229Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:43:23.9640000Z ** help 2021-05-17T16:43:24.0014579Z *** installing help indices 2021-05-17T16:43:24.0276380Z ** building package indices 2021-05-17T16:43:24.2371389Z ** installing vignettes 2021-05-17T16:43:24.2427450Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:43:24.4155273Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:43:24.4331058Z ** testing if installed package can be loaded from final location 2021-05-17T16:43:24.6067662Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:43:24.6078041Z * DONE (digest) 2021-05-17T16:43:24.8533040Z * installing *source* package ‘brio’ ... 2021-05-17T16:43:24.8548596Z ** package ‘brio’ successfully unpacked and MD5 sums checked 2021-05-17T16:43:24.8549699Z ** using staged installation 2021-05-17T16:43:24.8773520Z ** libs 2021-05-17T16:43:24.8825348Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c brio.c -o brio.o 2021-05-17T16:43:24.9213259Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c file_line_endings.c -o file_line_endings.o 2021-05-17T16:43:24.9683464Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:43:25.0116419Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_file.c -o read_file.o 2021-05-17T16:43:25.0678751Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_file_raw.c -o read_file_raw.o 2021-05-17T16:43:25.1238803Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_lines.c -o read_lines.o 2021-05-17T16:43:25.2078550Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write_file.c -o write_file.o 2021-05-17T16:43:25.2550429Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write_lines.c -o write_lines.o 2021-05-17T16:43:25.3093165Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o brio.so brio.o file_line_endings.o init.o read_file.o read_file_raw.o read_lines.o write_file.o write_lines.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:43:25.3323170Z installing to /home/runner/work/_temp/Library/00LOCK-brio/00new/brio/libs 2021-05-17T16:43:25.3326403Z ** R 2021-05-17T16:43:25.3365024Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:43:25.5618851Z ** help 2021-05-17T16:43:25.5833734Z *** installing help indices 2021-05-17T16:43:25.6043316Z ** building package indices 2021-05-17T16:43:25.7987228Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:43:25.9892197Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:43:26.0083679Z ** testing if installed package can be loaded from final location 2021-05-17T16:43:26.1816383Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:43:26.1822196Z * DONE (brio) 2021-05-17T16:43:26.4766998Z * installing *source* package ‘xml2’ ... 2021-05-17T16:43:26.4806256Z ** package ‘xml2’ successfully unpacked and MD5 sums checked 2021-05-17T16:43:26.4807343Z ** using staged installation 2021-05-17T16:43:26.4952185Z Found pkg-config cflags and libs! 2021-05-17T16:43:26.5801379Z Using PKG_CFLAGS=-I/usr/include/libxml2 2021-05-17T16:43:26.5802868Z Using PKG_LIBS=-lxml2 2021-05-17T16:43:26.8939199Z ** libs 2021-05-17T16:43:26.8989123Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c connection.cpp -o connection.o 2021-05-17T16:43:27.4568588Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:43:27.5037554Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_doc.cpp -o xml2_doc.o 2021-05-17T16:43:28.0965328Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_init.cpp -o xml2_init.o 2021-05-17T16:43:28.5521704Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_namespace.cpp -o xml2_namespace.o 2021-05-17T16:43:29.2885112Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_node.cpp -o xml2_node.o 2021-05-17T16:43:31.2817412Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_output.cpp -o xml2_output.o 2021-05-17T16:43:31.8553023Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_schema.cpp -o xml2_schema.o 2021-05-17T16:43:32.4923147Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_url.cpp -o xml2_url.o 2021-05-17T16:43:33.0286798Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_xpath.cpp -o xml2_xpath.o 2021-05-17T16:43:33.5091448Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o xml2.so connection.o init.o xml2_doc.o xml2_init.o xml2_namespace.o xml2_node.o xml2_output.o xml2_schema.o xml2_url.o xml2_xpath.o -lxml2 -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:43:33.5946418Z installing to /home/runner/work/_temp/Library/00LOCK-xml2/00new/xml2/libs 2021-05-17T16:43:33.5973899Z ** R 2021-05-17T16:43:33.6083943Z ** inst 2021-05-17T16:43:33.6098136Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:43:34.6440689Z ** help 2021-05-17T16:43:34.7523987Z *** installing help indices 2021-05-17T16:43:34.8141363Z ** building package indices 2021-05-17T16:43:35.0617615Z ** installing vignettes 2021-05-17T16:43:35.0747729Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:43:35.2742197Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:43:35.2924056Z ** testing if installed package can be loaded from final location 2021-05-17T16:43:35.4885646Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:43:35.4898481Z * DONE (xml2) 2021-05-17T16:43:35.7786722Z * installing *source* package ‘xfun’ ... 2021-05-17T16:43:35.7819187Z ** package ‘xfun’ successfully unpacked and MD5 sums checked 2021-05-17T16:43:35.7820074Z ** using staged installation 2021-05-17T16:43:35.7999451Z ** libs 2021-05-17T16:43:35.8078570Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-17T16:43:35.9072360Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:43:35.9523488Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o xfun.so base64.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:43:35.9868778Z installing to /home/runner/work/_temp/Library/00LOCK-xfun/00new/xfun/libs 2021-05-17T16:43:35.9882980Z ** R 2021-05-17T16:43:36.0038336Z ** inst 2021-05-17T16:43:36.0053054Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:43:37.4347679Z ** help 2021-05-17T16:43:37.5940248Z *** installing help indices 2021-05-17T16:43:37.6963919Z ** building package indices 2021-05-17T16:43:37.9922682Z ** installing vignettes 2021-05-17T16:43:37.9984951Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:43:38.1805536Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:43:38.1984790Z ** testing if installed package can be loaded from final location 2021-05-17T16:43:38.4053185Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:43:38.4066538Z * DONE (xfun) 2021-05-17T16:43:41.2670545Z * installing *source* package ‘stringi’ ... 2021-05-17T16:43:41.3778767Z ** package ‘stringi’ successfully unpacked and MD5 sums checked 2021-05-17T16:43:41.3779950Z ** using staged installation 2021-05-17T16:43:41.5003287Z checking for R_HOME... /opt/R/devel/lib/R 2021-05-17T16:43:41.5004365Z checking for R... /opt/R/devel/lib/R/bin/R 2021-05-17T16:43:41.6579270Z checking for endianness... little 2021-05-17T16:43:41.8150068Z checking for R >= 3.1.0 for C++11 use... yes 2021-05-17T16:43:41.9666723Z checking for R < 3.4.0 for CXX1X flag use... no 2021-05-17T16:43:41.9673548Z checking for cat... /usr/bin/cat 2021-05-17T16:43:42.1889348Z checking for local ICUDT_DIR... icu69/data 2021-05-17T16:43:42.1894594Z checking for gcc... gcc 2021-05-17T16:43:42.2487796Z checking whether the C compiler works... yes 2021-05-17T16:43:42.2489213Z checking for C compiler default output file name... a.out 2021-05-17T16:43:42.2839965Z checking for suffix of executables... 2021-05-17T16:43:42.3289220Z checking whether we are cross compiling... no 2021-05-17T16:43:42.3533576Z checking for suffix of object files... o 2021-05-17T16:43:42.3753661Z checking whether we are using the GNU C compiler... yes 2021-05-17T16:43:42.3957255Z checking whether gcc accepts -g... yes 2021-05-17T16:43:42.4308946Z checking for gcc option to accept ISO C89... none needed 2021-05-17T16:43:42.4515802Z checking how to run the C preprocessor... gcc -E 2021-05-17T16:43:42.4742713Z checking for grep that handles long lines and -e... /usr/bin/grep 2021-05-17T16:43:42.4759810Z checking for egrep... /usr/bin/grep -E 2021-05-17T16:43:42.5824173Z checking for ANSI C header files... yes 2021-05-17T16:43:42.6111032Z checking for sys/types.h... yes 2021-05-17T16:43:42.6450806Z checking for sys/stat.h... yes 2021-05-17T16:43:42.6779421Z checking for stdlib.h... yes 2021-05-17T16:43:42.7115090Z checking for string.h... yes 2021-05-17T16:43:42.7451364Z checking for memory.h... yes 2021-05-17T16:43:42.7812413Z checking for strings.h... yes 2021-05-17T16:43:42.8163617Z checking for inttypes.h... yes 2021-05-17T16:43:42.8502832Z checking for stdint.h... yes 2021-05-17T16:43:42.8880221Z checking for unistd.h... yes 2021-05-17T16:43:42.9291806Z checking elf.h usability... yes 2021-05-17T16:43:42.9403939Z checking elf.h presence... yes 2021-05-17T16:43:42.9404912Z checking for elf.h... yes 2021-05-17T16:43:42.9919785Z checking whether we are using the GNU C++ compiler... yes 2021-05-17T16:43:43.0122528Z checking whether g++ -std=gnu++11 accepts -g... yes 2021-05-17T16:43:43.3846449Z checking whether the C++ compiler supports the long long type... yes 2021-05-17T16:43:43.4083178Z checking whether the compiler implements namespaces... yes 2021-05-17T16:43:43.5540617Z checking whether the compiler supports Standard Template Library... yes 2021-05-17T16:43:44.1478522Z checking whether std::map is available... yes 2021-05-17T16:43:44.1502330Z checking for pkg-config... /usr/bin/pkg-config 2021-05-17T16:43:44.1658740Z checking with pkg-config for the system ICU4C... 66.1 2021-05-17T16:43:44.1679860Z checking for ICU4C >= 55... yes 2021-05-17T16:43:44.1745565Z checking for additional required CPPFLAGS, LDFLAGS, and LIBS... done 2021-05-17T16:43:44.6186776Z checking whether an ICU4C-based project can be built... yes 2021-05-17T16:43:44.6765823Z checking programmatically for sufficient U_ICU_VERSION_MAJOR_NUM... yes 2021-05-17T16:43:45.0190706Z checking programmatically if U_CHARSET_IS_UTF8 is defined and set... yes 2021-05-17T16:43:46.2084106Z checking the capabilities of the ICU data library (ucnv, uloc, utrans)... yes 2021-05-17T16:43:46.8419078Z checking the capabilities of the ICU data library (ucol)... yes 2021-05-17T16:43:46.8788665Z configure: creating ./config.status 2021-05-17T16:43:46.9604610Z config.status: creating src/Makevars 2021-05-17T16:43:46.9781530Z config.status: creating src/uconfig_local.h 2021-05-17T16:43:46.9951115Z config.status: creating src/install.libs.R 2021-05-17T16:43:47.0122440Z 2021-05-17T16:43:47.0123161Z *** stringi configure summary: 2021-05-17T16:43:47.0123936Z ICU_FOUND=1 2021-05-17T16:43:47.0124472Z STRINGI_CXXSTD=CXX_STD=CXX11 2021-05-17T16:43:47.0125568Z STRINGI_CFLAGS= -fpic 2021-05-17T16:43:47.0126560Z STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H 2021-05-17T16:43:47.0127569Z STRINGI_CXXFLAGS= -fpic 2021-05-17T16:43:47.0128642Z STRINGI_LDFLAGS=-L/usr/lib/x86_64-linux-gnu 2021-05-17T16:43:47.0129590Z STRINGI_LIBS=-licui18n -licuuc -licudata 2021-05-17T16:43:47.0130054Z 2021-05-17T16:43:47.0130579Z *** Compiler settings used: 2021-05-17T16:43:47.0131417Z CC=gcc 2021-05-17T16:43:47.0132019Z LD=g++ -std=gnu++14 2021-05-17T16:43:47.0132709Z CFLAGS=-g -O2 -fpic 2021-05-17T16:43:47.0133545Z CPPFLAGS=-I/usr/local/include -UDEBUG -DNDEBUG 2021-05-17T16:43:47.0134300Z CXX=g++ -std=gnu++11 2021-05-17T16:43:47.0135177Z CXXFLAGS=-g -O2 -fpic 2021-05-17T16:43:47.0135705Z LDFLAGS= 2021-05-17T16:43:47.0136130Z LIBS= 2021-05-17T16:43:47.0136443Z 2021-05-17T16:43:47.0491399Z ** libs 2021-05-17T16:43:47.0586411Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_brkiter.cpp -o stri_brkiter.o 2021-05-17T16:43:47.8341227Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_collator.cpp -o stri_collator.o 2021-05-17T16:43:48.5144061Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_common.cpp -o stri_common.o 2021-05-17T16:43:49.3027312Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_compare.cpp -o stri_compare.o 2021-05-17T16:43:50.1229426Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_base.cpp -o stri_container_base.o 2021-05-17T16:43:50.7178730Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o 2021-05-17T16:43:51.6964831Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listint.cpp -o stri_container_listint.o 2021-05-17T16:43:52.3216880Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listraw.cpp -o stri_container_listraw.o 2021-05-17T16:43:52.9929450Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listutf8.cpp -o stri_container_listutf8.o 2021-05-17T16:43:53.6640942Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_regex.cpp -o stri_container_regex.o 2021-05-17T16:43:54.3599591Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_usearch.cpp -o stri_container_usearch.o 2021-05-17T16:43:55.1488581Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf16.cpp -o stri_container_utf16.o 2021-05-17T16:43:55.9905894Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8.cpp -o stri_container_utf8.o 2021-05-17T16:43:56.7256005Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o 2021-05-17T16:43:57.3977846Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o 2021-05-17T16:43:58.4125542Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_detection.cpp -o stri_encoding_detection.o 2021-05-17T16:44:00.3324457Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_management.cpp -o stri_encoding_management.o 2021-05-17T16:44:01.0044223Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_escape.cpp -o stri_escape.o 2021-05-17T16:44:01.7400423Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_exception.cpp -o stri_exception.o 2021-05-17T16:44:02.3728819Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ICU_settings.cpp -o stri_ICU_settings.o 2021-05-17T16:44:02.9884500Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_join.cpp -o stri_join.o 2021-05-17T16:44:04.3335855Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_length.cpp -o stri_length.o 2021-05-17T16:44:04.9349230Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_pad.cpp -o stri_pad.o 2021-05-17T16:44:05.7028893Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_prepare_arg.cpp -o stri_prepare_arg.o 2021-05-17T16:44:06.5940904Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_random.cpp -o stri_random.o 2021-05-17T16:44:07.4719996Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_reverse.cpp -o stri_reverse.o 2021-05-17T16:44:08.1184327Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_count.cpp -o stri_search_class_count.o 2021-05-17T16:44:08.8325016Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_detect.cpp -o stri_search_class_detect.o 2021-05-17T16:44:09.5278744Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_extract.cpp -o stri_search_class_extract.o 2021-05-17T16:44:10.5134887Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_locate.cpp -o stri_search_class_locate.o 2021-05-17T16:44:11.5033160Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_replace.cpp -o stri_search_class_replace.o 2021-05-17T16:44:12.7004202Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_split.cpp -o stri_search_class_split.o 2021-05-17T16:44:13.6486519Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o 2021-05-17T16:44:14.4763916Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_subset.cpp -o stri_search_class_subset.o 2021-05-17T16:44:15.3185811Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_trim.cpp -o stri_search_class_trim.o 2021-05-17T16:44:16.0713647Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_common.cpp -o stri_search_common.o 2021-05-17T16:44:16.9012475Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_count.cpp -o stri_search_coll_count.o 2021-05-17T16:44:17.7061600Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o 2021-05-17T16:44:18.4119676Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o 2021-05-17T16:44:19.2975751Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o 2021-05-17T16:44:20.1699228Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o 2021-05-17T16:44:21.2037444Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_split.cpp -o stri_search_coll_split.o 2021-05-17T16:44:22.2033489Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o 2021-05-17T16:44:23.0883334Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o 2021-05-17T16:44:23.9010202Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o 2021-05-17T16:44:24.5187465Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o 2021-05-17T16:44:25.3542769Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o 2021-05-17T16:44:26.1820026Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o 2021-05-17T16:44:26.9979931Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o 2021-05-17T16:44:27.6277124Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o 2021-05-17T16:44:28.2760464Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o 2021-05-17T16:44:29.1101758Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o 2021-05-17T16:44:29.9151210Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o 2021-05-17T16:44:30.7969975Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o 2021-05-17T16:44:31.6357271Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o 2021-05-17T16:44:32.4680866Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o 2021-05-17T16:44:33.2288197Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_in.cpp -o stri_search_in.o 2021-05-17T16:44:33.2429588Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_other_split.cpp -o stri_search_other_split.o 2021-05-17T16:44:34.1650365Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_count.cpp -o stri_search_regex_count.o 2021-05-17T16:44:34.8565123Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o 2021-05-17T16:44:35.5322480Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o 2021-05-17T16:44:36.4086086Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o 2021-05-17T16:44:37.8426903Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_match.cpp -o stri_search_regex_match.o 2021-05-17T16:44:38.3558586Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o 2021-05-17T16:44:39.0931307Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_split.cpp -o stri_search_regex_split.o 2021-05-17T16:44:39.9644370Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o 2021-05-17T16:44:40.7287603Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sort.cpp -o stri_sort.o 2021-05-17T16:44:42.4716768Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stats.cpp -o stri_stats.o 2021-05-17T16:44:43.2346850Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stringi.cpp -o stri_stringi.o 2021-05-17T16:44:43.9406198Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sub.cpp -o stri_sub.o 2021-05-17T16:44:44.8990556Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_test.cpp -o stri_test.o 2021-05-17T16:44:45.5102248Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_zone.cpp -o stri_time_zone.o 2021-05-17T16:44:46.1570600Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_calendar.cpp -o stri_time_calendar.o 2021-05-17T16:44:47.1192489Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_symbols.cpp -o stri_time_symbols.o 2021-05-17T16:44:47.9536129Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_format.cpp -o stri_time_format.o 2021-05-17T16:44:49.1724428Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_casemap.cpp -o stri_trans_casemap.o 2021-05-17T16:44:49.9500013Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_other.cpp -o stri_trans_other.o 2021-05-17T16:44:50.7302464Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_normalization.cpp -o stri_trans_normalization.o 2021-05-17T16:44:51.4465235Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o 2021-05-17T16:44:52.0928079Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ucnv.cpp -o stri_ucnv.o 2021-05-17T16:44:52.7682906Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_uloc.cpp -o stri_uloc.o 2021-05-17T16:44:53.4057988Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_utils.cpp -o stri_utils.o 2021-05-17T16:44:54.0271801Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_wrap.cpp -o stri_wrap.o 2021-05-17T16:44:55.4688685Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o stringi.so stri_brkiter.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_stats.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:44:55.6731730Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-stringi/00new/stringi 2021-05-17T16:44:55.7548049Z ** R 2021-05-17T16:44:55.7868014Z ** inst 2021-05-17T16:44:55.7877895Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:44:56.9672204Z ** help 2021-05-17T16:44:57.4217282Z *** installing help indices 2021-05-17T16:44:57.6547073Z ** building package indices 2021-05-17T16:44:58.0694448Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:44:58.2582324Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:44:58.2795095Z ** testing if installed package can be loaded from final location 2021-05-17T16:44:58.4734412Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:44:58.4746752Z * DONE (stringi) 2021-05-17T16:44:59.5576927Z * installing *source* package ‘Rcpp’ ... 2021-05-17T16:44:59.5921357Z ** package ‘Rcpp’ successfully unpacked and MD5 sums checked 2021-05-17T16:44:59.5922724Z ** using staged installation 2021-05-17T16:44:59.6048487Z ** libs 2021-05-17T16:44:59.6099287Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c api.cpp -o api.o 2021-05-17T16:45:03.0095693Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c attributes.cpp -o attributes.o 2021-05-17T16:45:19.6691937Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c barrier.cpp -o barrier.o 2021-05-17T16:45:19.8891877Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c date.cpp -o date.o 2021-05-17T16:45:23.6279333Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c module.cpp -o module.o 2021-05-17T16:45:30.7934565Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c rcpp_init.cpp -o rcpp_init.o 2021-05-17T16:45:34.1058421Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o Rcpp.so api.o attributes.o barrier.o date.o module.o rcpp_init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:45:34.3004114Z installing to /home/runner/work/_temp/Library/00LOCK-Rcpp/00new/Rcpp/libs 2021-05-17T16:45:34.3102551Z ** R 2021-05-17T16:45:34.3265365Z ** inst 2021-05-17T16:45:34.3700810Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:45:36.1698224Z ** help 2021-05-17T16:45:36.2692345Z *** installing help indices 2021-05-17T16:45:36.3461618Z ** building package indices 2021-05-17T16:45:36.5969818Z ** installing vignettes 2021-05-17T16:45:36.6046443Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:45:36.8811743Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:45:36.9025387Z ** testing if installed package can be loaded from final location 2021-05-17T16:45:37.2035923Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:45:37.2146930Z * DONE (Rcpp) 2021-05-17T16:45:37.5146069Z * installing *source* package ‘commonmark’ ... 2021-05-17T16:45:37.5180570Z ** package ‘commonmark’ successfully unpacked and MD5 sums checked 2021-05-17T16:45:37.5181486Z ** using staged installation 2021-05-17T16:45:37.5299378Z ** libs 2021-05-17T16:45:37.5352640Z rm -f cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o extensions.o init.o wrapper.o commonmark.so cmark/libstatcmark.a 2021-05-17T16:45:37.5383980Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions.c -o extensions.o 2021-05-17T16:45:37.5879901Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:45:37.6274065Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c wrapper.c -o wrapper.o 2021-05-17T16:45:37.6889122Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/cmark.c -o cmark/cmark.o 2021-05-17T16:45:37.7394633Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/node.c -o cmark/node.o 2021-05-17T16:45:38.0404408Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/iterator.c -o cmark/iterator.o 2021-05-17T16:45:38.1318581Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/blocks.c -o cmark/blocks.o 2021-05-17T16:45:38.5824574Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/inlines.c -o cmark/inlines.o 2021-05-17T16:45:39.3880143Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/scanners.c -o cmark/scanners.o 2021-05-17T16:45:41.2513189Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/utf8.c -o cmark/utf8.o 2021-05-17T16:45:44.7918553Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/buffer.c -o cmark/buffer.o 2021-05-17T16:45:44.9230819Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/references.c -o cmark/references.o 2021-05-17T16:45:44.9705402Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/render.c -o cmark/render.o 2021-05-17T16:45:45.0688559Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/man.c -o cmark/man.o 2021-05-17T16:45:45.1529411Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/xml.c -o cmark/xml.o 2021-05-17T16:45:45.2371292Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/html.c -o cmark/html.o 2021-05-17T16:45:45.4330275Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/commonmark.c -o cmark/commonmark.o 2021-05-17T16:45:45.6388742Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/latex.c -o cmark/latex.o 2021-05-17T16:45:45.7653259Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_href_e.c -o cmark/houdini_href_e.o 2021-05-17T16:45:45.8071621Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_html_e.c -o cmark/houdini_html_e.o 2021-05-17T16:45:45.8492729Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_html_u.c -o cmark/houdini_html_u.o 2021-05-17T16:45:45.9526474Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/cmark_ctype.c -o cmark/cmark_ctype.o 2021-05-17T16:45:45.9808318Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/arena.c -o cmark/arena.o 2021-05-17T16:45:46.0426186Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/linked_list.c -o cmark/linked_list.o 2021-05-17T16:45:46.0856909Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/plugin.c -o cmark/plugin.o 2021-05-17T16:45:46.1232876Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/registry.c -o cmark/registry.o 2021-05-17T16:45:46.1716056Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/syntax_extension.c -o cmark/syntax_extension.o 2021-05-17T16:45:46.2455676Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/plaintext.c -o cmark/plaintext.o 2021-05-17T16:45:46.3633555Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/footnotes.c -o cmark/footnotes.o 2021-05-17T16:45:46.4115846Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/map.c -o cmark/map.o 2021-05-17T16:45:46.4852221Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/autolink.c -o extensions/autolink.o 2021-05-17T16:45:46.6568767Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/core-extensions.c -o extensions/core-extensions.o 2021-05-17T16:45:46.6899314Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/ext_scanners.c -o extensions/ext_scanners.o 2021-05-17T16:45:46.8352397Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/strikethrough.c -o extensions/strikethrough.o 2021-05-17T16:45:47.8628187Z installing to /home/runner/work/_temp/Library/00LOCK-commonmark/00new/commonmark/libs 2021-05-17T16:45:47.8630150Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/table.c -o extensions/table.o 2021-05-17T16:45:47.8639047Z ** R 2021-05-17T16:45:47.8640027Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:45:47.8640497Z ** help 2021-05-17T16:45:47.8640899Z *** installing help indices 2021-05-17T16:45:47.8641364Z ** building package indices 2021-05-17T16:45:47.8642277Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:45:47.8645131Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/tagfilter.c -o extensions/tagfilter.o 2021-05-17T16:45:47.8650583Z ar rcs cmark/libstatcmark.a cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o 2021-05-17T16:45:47.8653503Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o commonmark.so extensions.o init.o wrapper.o -Lcmark -lstatcmark -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:45:47.9608249Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:45:47.9793701Z ** testing if installed package can be loaded from final location 2021-05-17T16:45:48.1512830Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:45:48.1518377Z * DONE (commonmark) 2021-05-17T16:45:48.4152863Z * installing *source* package ‘brew’ ... 2021-05-17T16:45:48.4168150Z ** using staged installation 2021-05-17T16:45:48.4256946Z ** R 2021-05-17T16:45:48.4292507Z ** inst 2021-05-17T16:45:48.4323175Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:45:48.8123129Z ** help 2021-05-17T16:45:48.8237979Z *** installing help indices 2021-05-17T16:45:48.8437998Z ** building package indices 2021-05-17T16:45:49.0420471Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:45:49.2222855Z ** testing if installed package can be loaded from final location 2021-05-17T16:45:49.4061461Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:45:49.4069284Z * DONE (brew) 2021-05-17T16:45:49.6393480Z * installing *source* package ‘sessioninfo’ ... 2021-05-17T16:45:49.6412038Z ** package ‘sessioninfo’ successfully unpacked and MD5 sums checked 2021-05-17T16:45:49.6416518Z ** using staged installation 2021-05-17T16:45:49.6582188Z ** R 2021-05-17T16:45:49.6622559Z ** inst 2021-05-17T16:45:49.6630664Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:45:50.1562855Z ** help 2021-05-17T16:45:50.1704071Z *** installing help indices 2021-05-17T16:45:50.1900006Z ** building package indices 2021-05-17T16:45:50.3894919Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:45:50.6176986Z ** testing if installed package can be loaded from final location 2021-05-17T16:45:50.8483530Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:45:50.8491533Z * DONE (sessioninfo) 2021-05-17T16:45:51.0837311Z * installing *source* package ‘prettyunits’ ... 2021-05-17T16:45:51.0848282Z ** package ‘prettyunits’ successfully unpacked and MD5 sums checked 2021-05-17T16:45:51.0849337Z ** using staged installation 2021-05-17T16:45:51.0967212Z ** R 2021-05-17T16:45:51.1016460Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:45:51.4322624Z ** help 2021-05-17T16:45:51.4568090Z *** installing help indices 2021-05-17T16:45:51.4778985Z ** building package indices 2021-05-17T16:45:51.6745718Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:45:51.8529128Z ** testing if installed package can be loaded from final location 2021-05-17T16:45:52.0257848Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:45:52.0264215Z * DONE (prettyunits) 2021-05-17T16:45:52.6186369Z * installing *source* package ‘vctrs’ ... 2021-05-17T16:45:52.6332368Z ** package ‘vctrs’ successfully unpacked and MD5 sums checked 2021-05-17T16:45:52.6333653Z ** using staged installation 2021-05-17T16:45:52.6529793Z ** libs 2021-05-17T16:45:52.6608376Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c altrep-rle.c -o altrep-rle.o 2021-05-17T16:45:52.7879998Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c arg-counter.c -o arg-counter.o 2021-05-17T16:45:52.8831939Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c arg.c -o arg.o 2021-05-17T16:45:52.9752629Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c bind.c -o bind.o 2021-05-17T16:45:53.2372335Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c c-unchop.c -o c-unchop.o 2021-05-17T16:45:53.3577618Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c c.c -o c.o 2021-05-17T16:45:53.4938514Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c callables.c -o callables.o 2021-05-17T16:45:53.5531258Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast-bare.c -o cast-bare.o 2021-05-17T16:45:53.6592326Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast-dispatch.c -o cast-dispatch.o 2021-05-17T16:45:53.7340761Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast.c -o cast.o 2021-05-17T16:45:53.8736235Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c compare.c -o compare.o 2021-05-17T16:45:54.0815349Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c complete.c -o complete.o 2021-05-17T16:45:54.2029295Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c conditions.c -o conditions.o 2021-05-17T16:45:54.2890771Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dictionary.c -o dictionary.o 2021-05-17T16:45:54.5580387Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dim.c -o dim.o 2021-05-17T16:45:54.6227485Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c equal.c -o equal.o 2021-05-17T16:45:55.0373058Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fields.c -o fields.o 2021-05-17T16:45:55.1267720Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fill.c -o fill.o 2021-05-17T16:45:55.2462681Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c group.c -o group.o 2021-05-17T16:45:55.3633565Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c growable.c -o growable.o 2021-05-17T16:45:55.4192697Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hash.c -o hash.o 2021-05-17T16:45:55.6577998Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:45:55.7190980Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c names.c -o names.o 2021-05-17T16:45:56.0491607Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-groups.c -o order-groups.o 2021-05-17T16:45:56.1262792Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-radix.c -o order-radix.o 2021-05-17T16:45:56.8749528Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-sortedness.c -o order-sortedness.o 2021-05-17T16:45:57.0340188Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-transform.c -o order-transform.o 2021-05-17T16:45:57.1081044Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-truelength.c -o order-truelength.o 2021-05-17T16:45:57.1826920Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c poly-op.c -o poly-op.o 2021-05-17T16:45:57.3473401Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c proxy-restore.c -o proxy-restore.o 2021-05-17T16:45:57.4608548Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c proxy.c -o proxy.o 2021-05-17T16:45:57.5883049Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ptype2-dispatch.c -o ptype2-dispatch.o 2021-05-17T16:45:57.7041451Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rep.c -o rep.o 2021-05-17T16:45:57.8390373Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c runs.c -o runs.o 2021-05-17T16:45:58.0957798Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c shape.c -o shape.o 2021-05-17T16:45:58.1913826Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size-common.c -o size-common.o 2021-05-17T16:45:58.2724500Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size.c -o size.o 2021-05-17T16:45:58.3831288Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-array.c -o slice-array.o 2021-05-17T16:45:58.8491125Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-assign-array.c -o slice-assign-array.o 2021-05-17T16:45:59.2077519Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-assign.c -o slice-assign.o 2021-05-17T16:45:59.4598879Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-chop.c -o slice-chop.o 2021-05-17T16:45:59.6288247Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice.c -o slice.o 2021-05-17T16:45:59.9102168Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c split.c -o split.o 2021-05-17T16:45:59.9674655Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c subscript-loc.c -o subscript-loc.o 2021-05-17T16:46:00.1700591Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c subscript.c -o subscript.o 2021-05-17T16:46:00.3126170Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c translate.c -o translate.o 2021-05-17T16:46:00.4206322Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-data-frame.c -o type-data-frame.o 2021-05-17T16:46:00.7693446Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-date-time.c -o type-date-time.o 2021-05-17T16:46:00.9304879Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-factor.c -o type-factor.o 2021-05-17T16:46:01.0662947Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-info.c -o type-info.o 2021-05-17T16:46:01.1715123Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-tibble.c -o type-tibble.o 2021-05-17T16:46:01.2451495Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type.c -o type.o 2021-05-17T16:46:01.3723719Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type2.c -o type2.o 2021-05-17T16:46:01.5106186Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typeof2-s3.c -o typeof2-s3.o 2021-05-17T16:46:01.6374667Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typeof2.c -o typeof2.o 2021-05-17T16:46:01.7438402Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c unspecified.c -o unspecified.o 2021-05-17T16:46:02.3671056Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils-dispatch.c -o utils-dispatch.o 2021-05-17T16:46:02.3673349Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils-rlang.c -o utils-rlang.o 2021-05-17T16:46:02.3675680Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-17T16:46:02.6188880Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-17T16:46:02.6578971Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o vctrs.so altrep-rle.o arg-counter.o arg.o bind.o c-unchop.o c.o callables.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o equal.o fields.o fill.o group.o growable.o hash.o init.o names.o order-groups.o order-radix.o order-sortedness.o order-transform.o order-truelength.o poly-op.o proxy-restore.o proxy.o ptype2-dispatch.o rep.o runs.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-tibble.o type.o type2.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils-rlang.o utils.o version.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:46:02.7124966Z installing to /home/runner/work/_temp/Library/00LOCK-vctrs/00new/vctrs/libs 2021-05-17T16:46:02.7155456Z ** R 2021-05-17T16:46:02.7503238Z ** inst 2021-05-17T16:46:02.7524880Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:46:05.5533688Z ** help 2021-05-17T16:46:05.8112303Z *** installing help indices 2021-05-17T16:46:05.9894125Z *** copying figures 2021-05-17T16:46:05.9905340Z ** building package indices 2021-05-17T16:46:06.3183138Z ** installing vignettes 2021-05-17T16:46:06.3367859Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:46:06.5755468Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:46:06.5957908Z ** testing if installed package can be loaded from final location 2021-05-17T16:46:06.8883269Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:46:06.8914722Z * DONE (vctrs) 2021-05-17T16:46:07.1847912Z * installing *source* package ‘processx’ ... 2021-05-17T16:46:07.1884998Z ** package ‘processx’ successfully unpacked and MD5 sums checked 2021-05-17T16:46:07.1886354Z ** using staged installation 2021-05-17T16:46:07.2053226Z ** libs 2021-05-17T16:46:07.2108680Z gcc -g -O2 -L/usr/local/lib -Wall tools/px.c -o tools/px 2021-05-17T16:46:07.3567012Z gcc -g -O2 -L/usr/local/lib supervisor/supervisor.c \ 2021-05-17T16:46:07.3568617Z supervisor/utils.c -o supervisor/supervisor 2021-05-17T16:46:07.5323632Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-17T16:46:07.6186711Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c client.c -o client.o 2021-05-17T16:46:07.7110937Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c errors.c -o errors.o 2021-05-17T16:46:07.7704566Z gcc -shared -L"/opt/R/devel/lib/R/lib" -L/usr/local/lib -o client.so base64.o client.o errors.o \ 2021-05-17T16:46:07.7705788Z -L"/opt/R/devel/lib/R/lib" -lR 2021-05-17T16:46:07.7915573Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:46:07.8604021Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c poll.c -o poll.o 2021-05-17T16:46:07.9672379Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c processx-connection.c -o processx-connection.o 2021-05-17T16:46:08.3214200Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c processx-vector.c -o processx-vector.o 2021-05-17T16:46:08.4160074Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c create-time.c -o create-time.o 2021-05-17T16:46:08.5285922Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/childlist.c -o unix/childlist.o 2021-05-17T16:46:08.6256564Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/connection.c -o unix/connection.o 2021-05-17T16:46:08.6978763Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/processx.c -o unix/processx.o 2021-05-17T16:46:09.0245847Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/sigchld.c -o unix/sigchld.o 2021-05-17T16:46:09.1268309Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/utils.c -o unix/utils.o 2021-05-17T16:46:09.2381904Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/named_pipe.c -o unix/named_pipe.o 2021-05-17T16:46:09.2983832Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cleancall.c -o cleancall.o 2021-05-17T16:46:09.3740088Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o processx.so init.o poll.o errors.o processx-connection.o processx-vector.o create-time.o base64.o unix/childlist.o unix/connection.o unix/processx.o unix/sigchld.o unix/utils.o unix/named_pipe.o cleancall.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:46:09.4043831Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-processx/00new/processx 2021-05-17T16:46:09.4089176Z ** R 2021-05-17T16:46:09.4247998Z ** inst 2021-05-17T16:46:09.4258239Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:46:11.2360857Z ** help 2021-05-17T16:46:11.3081515Z *** installing help indices 2021-05-17T16:46:11.3473165Z ** building package indices 2021-05-17T16:46:11.5866355Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:46:11.7808906Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:46:11.8068367Z ** testing if installed package can be loaded from final location 2021-05-17T16:46:12.0222965Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:46:12.0238523Z * DONE (processx) 2021-05-17T16:46:12.2970189Z * installing *source* package ‘markdown’ ... 2021-05-17T16:46:12.2994159Z ** package ‘markdown’ successfully unpacked and MD5 sums checked 2021-05-17T16:46:12.2996129Z ** using staged installation 2021-05-17T16:46:12.3174571Z ** libs 2021-05-17T16:46:12.3229921Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rbase64.c -o Rbase64.o 2021-05-17T16:46:12.3913119Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rinit.c -o Rinit.o 2021-05-17T16:46:12.4447602Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rmarkdown.c -o Rmarkdown.o 2021-05-17T16:46:12.6265011Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c autolink.c -o autolink.o 2021-05-17T16:46:12.7335469Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c buffer.c -o buffer.o 2021-05-17T16:46:12.8184047Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_href_e.c -o houdini_href_e.o 2021-05-17T16:46:12.8625221Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_html_e.c -o houdini_html_e.o 2021-05-17T16:46:12.9047956Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html.c -o html.o 2021-05-17T16:46:13.1359880Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html_smartypants.c -o html_smartypants.o 2021-05-17T16:46:13.2754827Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c markdown.c -o markdown.o 2021-05-17T16:46:14.4284266Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stack.c -o stack.o 2021-05-17T16:46:14.4783742Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o markdown.so Rbase64.o Rinit.o Rmarkdown.o autolink.o buffer.o houdini_href_e.o houdini_html_e.o html.o html_smartypants.o markdown.o stack.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:46:14.5043527Z installing to /home/runner/work/_temp/Library/00LOCK-markdown/00new/markdown/libs 2021-05-17T16:46:14.5051129Z ** R 2021-05-17T16:46:14.5107071Z ** inst 2021-05-17T16:46:14.5125743Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:46:14.9490809Z ** help 2021-05-17T16:46:14.9870228Z *** installing help indices 2021-05-17T16:46:15.0158194Z ** building package indices 2021-05-17T16:46:15.2336708Z ** installing vignettes 2021-05-17T16:46:15.2396031Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:46:15.4148140Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:46:15.4330202Z ** testing if installed package can be loaded from final location 2021-05-17T16:46:15.6096723Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:46:15.6107154Z * DONE (markdown) 2021-05-17T16:46:15.8280967Z * installing *source* package ‘highr’ ... 2021-05-17T16:46:15.8292509Z ** package ‘highr’ successfully unpacked and MD5 sums checked 2021-05-17T16:46:15.8293877Z ** using staged installation 2021-05-17T16:46:15.8458974Z ** R 2021-05-17T16:46:15.8497814Z ** inst 2021-05-17T16:46:15.8510273Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:46:16.2002634Z ** help 2021-05-17T16:46:16.2102132Z *** installing help indices 2021-05-17T16:46:16.2264297Z ** building package indices 2021-05-17T16:46:16.4237946Z ** installing vignettes 2021-05-17T16:46:16.4289478Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:46:16.6057413Z ** testing if installed package can be loaded from final location 2021-05-17T16:46:16.7840400Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:46:16.7847107Z * DONE (highr) 2021-05-17T16:46:17.0788762Z * installing *source* package ‘stringr’ ... 2021-05-17T16:46:17.0822476Z ** package ‘stringr’ successfully unpacked and MD5 sums checked 2021-05-17T16:46:17.0824645Z ** using staged installation 2021-05-17T16:46:17.1016123Z ** R 2021-05-17T16:46:17.1107466Z ** data 2021-05-17T16:46:17.1115929Z *** moving datasets to lazyload DB 2021-05-17T16:46:17.1303256Z ** inst 2021-05-17T16:46:17.1320148Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:46:17.6766570Z ** help 2021-05-17T16:46:17.7600720Z *** installing help indices 2021-05-17T16:46:17.8206556Z *** copying figures 2021-05-17T16:46:17.8208939Z ** building package indices 2021-05-17T16:46:18.0584766Z ** installing vignettes 2021-05-17T16:46:18.0644277Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:46:18.2608557Z ** testing if installed package can be loaded from final location 2021-05-17T16:46:18.4516155Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:46:18.4525317Z * DONE (stringr) 2021-05-17T16:46:18.6791464Z * installing *source* package ‘rversions’ ... 2021-05-17T16:46:18.6804643Z ** package ‘rversions’ successfully unpacked and MD5 sums checked 2021-05-17T16:46:18.6806099Z ** using staged installation 2021-05-17T16:46:18.6959971Z ** R 2021-05-17T16:46:18.7000732Z ** inst 2021-05-17T16:46:18.7009869Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:46:19.0210585Z ** help 2021-05-17T16:46:19.0421968Z *** installing help indices 2021-05-17T16:46:19.0651826Z *** copying figures 2021-05-17T16:46:19.0655437Z ** building package indices 2021-05-17T16:46:19.2632769Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:46:19.4663525Z ** testing if installed package can be loaded from final location 2021-05-17T16:46:19.6681502Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:46:19.6687405Z * DONE (rversions) 2021-05-17T16:46:20.0941948Z * installing *source* package ‘pillar’ ... 2021-05-17T16:46:20.1039980Z ** package ‘pillar’ successfully unpacked and MD5 sums checked 2021-05-17T16:46:20.1041050Z ** using staged installation 2021-05-17T16:46:20.1243493Z ** R 2021-05-17T16:46:20.1431107Z ** inst 2021-05-17T16:46:20.1464663Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:46:21.9833272Z ** help 2021-05-17T16:46:22.0726621Z *** installing help indices 2021-05-17T16:46:22.1409067Z *** copying figures 2021-05-17T16:46:22.1415177Z ** building package indices 2021-05-17T16:46:22.3962865Z ** installing vignettes 2021-05-17T16:46:22.4049438Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:46:22.7119725Z ** testing if installed package can be loaded from final location 2021-05-17T16:46:23.0585371Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:46:23.0617664Z * DONE (pillar) 2021-05-17T16:46:23.3597989Z * installing *source* package ‘callr’ ... 2021-05-17T16:46:23.3629586Z ** package ‘callr’ successfully unpacked and MD5 sums checked 2021-05-17T16:46:23.3631123Z ** using staged installation 2021-05-17T16:46:23.3792530Z ** R 2021-05-17T16:46:23.3943942Z ** inst 2021-05-17T16:46:23.3953401Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:46:26.8163480Z ** help 2021-05-17T16:46:26.9325067Z *** installing help indices 2021-05-17T16:46:26.9967507Z ** building package indices 2021-05-17T16:46:27.2482377Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:46:27.4502806Z ** testing if installed package can be loaded from final location 2021-05-17T16:46:27.7059414Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:46:27.7087794Z * DONE (callr) 2021-05-17T16:46:28.2063138Z * installing *source* package ‘knitr’ ... 2021-05-17T16:46:28.2173483Z ** package ‘knitr’ successfully unpacked and MD5 sums checked 2021-05-17T16:46:28.2174542Z ** using staged installation 2021-05-17T16:46:28.2579674Z ** R 2021-05-17T16:46:28.3022003Z ** demo 2021-05-17T16:46:28.3029831Z ** inst 2021-05-17T16:46:28.3144010Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:46:32.4128351Z ** help 2021-05-17T16:46:32.6118496Z *** installing help indices 2021-05-17T16:46:32.7301254Z ** building package indices 2021-05-17T16:46:33.0202561Z ** installing vignettes 2021-05-17T16:46:33.0291572Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:46:33.2247647Z ** testing if installed package can be loaded from final location 2021-05-17T16:46:33.5122834Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:46:33.5124336Z * DONE (knitr) 2021-05-17T16:46:33.7270764Z * installing *source* package ‘xopen’ ... 2021-05-17T16:46:33.7281320Z ** package ‘xopen’ successfully unpacked and MD5 sums checked 2021-05-17T16:46:33.7296242Z ** using staged installation 2021-05-17T16:46:33.7432726Z ** R 2021-05-17T16:46:33.7459794Z ** inst 2021-05-17T16:46:33.7468031Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:46:33.9963115Z ** help 2021-05-17T16:46:34.0055398Z *** installing help indices 2021-05-17T16:46:34.0283731Z ** building package indices 2021-05-17T16:46:34.2445097Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:46:34.4625622Z ** testing if installed package can be loaded from final location 2021-05-17T16:46:34.6562979Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:46:34.6568911Z * DONE (xopen) 2021-05-17T16:46:35.1088862Z * installing *source* package ‘tibble’ ... 2021-05-17T16:46:35.1177475Z ** package ‘tibble’ successfully unpacked and MD5 sums checked 2021-05-17T16:46:35.1178718Z ** using staged installation 2021-05-17T16:46:35.1392429Z ** libs 2021-05-17T16:46:35.1438696Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c attributes.c -o attributes.o 2021-05-17T16:46:35.1906379Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-05-17T16:46:35.2542669Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:46:35.2890736Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c matrixToDataFrame.c -o matrixToDataFrame.o 2021-05-17T16:46:35.3876335Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:46:35.4091186Z installing to /home/runner/work/_temp/Library/00LOCK-tibble/00new/tibble/libs 2021-05-17T16:46:35.4104812Z ** R 2021-05-17T16:46:35.4274933Z ** inst 2021-05-17T16:46:35.4304526Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:46:37.3238264Z ** help 2021-05-17T16:46:37.4003361Z *** installing help indices 2021-05-17T16:46:37.4518976Z *** copying figures 2021-05-17T16:46:37.4527896Z ** building package indices 2021-05-17T16:46:37.6909319Z ** installing vignettes 2021-05-17T16:46:37.6983686Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:46:38.0676630Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:46:38.0865010Z ** testing if installed package can be loaded from final location 2021-05-17T16:46:38.5070099Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:46:38.5096110Z * DONE (tibble) 2021-05-17T16:46:38.8024914Z * installing *source* package ‘pkgbuild’ ... 2021-05-17T16:46:38.8043280Z ** package ‘pkgbuild’ successfully unpacked and MD5 sums checked 2021-05-17T16:46:38.8044373Z ** using staged installation 2021-05-17T16:46:38.8197747Z ** R 2021-05-17T16:46:38.8287178Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:46:40.0606411Z ** help 2021-05-17T16:46:40.1054979Z *** installing help indices 2021-05-17T16:46:40.1424593Z ** building package indices 2021-05-17T16:46:40.3575271Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:46:40.6298668Z ** testing if installed package can be loaded from final location 2021-05-17T16:46:40.9028874Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:46:40.9042679Z * DONE (pkgbuild) 2021-05-17T16:46:41.3174859Z * installing *source* package ‘roxygen2’ ... 2021-05-17T16:46:41.3248710Z ** package ‘roxygen2’ successfully unpacked and MD5 sums checked 2021-05-17T16:46:41.3253284Z ** using staged installation 2021-05-17T16:46:41.3453012Z ** libs 2021-05-17T16:46:41.3502270Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-17T16:46:46.2017975Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c escapeExamples.cpp -o escapeExamples.o 2021-05-17T16:46:49.5092082Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c isComplete.cpp -o isComplete.o 2021-05-17T16:46:52.8266665Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c leadingSpaces.cpp -o leadingSpaces.o 2021-05-17T16:46:56.1373994Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c parser2.cpp -o parser2.o 2021-05-17T16:47:01.1946586Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c wrapUsage.cpp -o wrapUsage.o 2021-05-17T16:47:04.6074637Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o roxygen2.so RcppExports.o escapeExamples.o isComplete.o leadingSpaces.o parser2.o wrapUsage.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:47:04.6989233Z installing to /home/runner/work/_temp/Library/00LOCK-roxygen2/00new/roxygen2/libs 2021-05-17T16:47:04.7026783Z ** R 2021-05-17T16:47:04.7329838Z ** inst 2021-05-17T16:47:04.7347614Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:47:09.3690036Z ** help 2021-05-17T16:47:09.4508982Z *** installing help indices 2021-05-17T16:47:09.5105275Z *** copying figures 2021-05-17T16:47:09.5108398Z ** building package indices 2021-05-17T16:47:09.7623102Z ** installing vignettes 2021-05-17T16:47:09.7733846Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:47:10.1572149Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:47:10.1780997Z ** testing if installed package can be loaded from final location 2021-05-17T16:47:10.6387594Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:47:10.6426752Z * DONE (roxygen2) 2021-05-17T16:47:10.8807768Z * installing *source* package ‘rematch2’ ... 2021-05-17T16:47:10.8821504Z ** package ‘rematch2’ successfully unpacked and MD5 sums checked 2021-05-17T16:47:10.8822553Z ** using staged installation 2021-05-17T16:47:10.8974787Z ** R 2021-05-17T16:47:10.9022128Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:47:11.4402749Z ** help 2021-05-17T16:47:11.4726274Z *** installing help indices 2021-05-17T16:47:11.4965646Z ** building package indices 2021-05-17T16:47:11.7168178Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:47:12.1189991Z ** testing if installed package can be loaded from final location 2021-05-17T16:47:12.5307694Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:47:12.5309198Z * DONE (rematch2) 2021-05-17T16:47:12.8239891Z * installing *source* package ‘rcmdcheck’ ... 2021-05-17T16:47:12.8269856Z ** package ‘rcmdcheck’ successfully unpacked and MD5 sums checked 2021-05-17T16:47:12.8271046Z ** using staged installation 2021-05-17T16:47:12.8439200Z ** R 2021-05-17T16:47:12.8532309Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:47:14.1592586Z ** help 2021-05-17T16:47:14.2003878Z *** installing help indices 2021-05-17T16:47:14.2346244Z ** building package indices 2021-05-17T16:47:14.4448285Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:47:14.7518585Z ** testing if installed package can be loaded from final location 2021-05-17T16:47:15.0571967Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:47:15.0584973Z * DONE (rcmdcheck) 2021-05-17T16:47:15.3244591Z * installing *source* package ‘waldo’ ... 2021-05-17T16:47:15.3267977Z ** package ‘waldo’ successfully unpacked and MD5 sums checked 2021-05-17T16:47:15.3270131Z ** using staged installation 2021-05-17T16:47:15.3419028Z ** R 2021-05-17T16:47:15.3481973Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:47:16.1168704Z ** help 2021-05-17T16:47:16.1314482Z *** installing help indices 2021-05-17T16:47:16.1499688Z *** copying figures 2021-05-17T16:47:16.1502175Z ** building package indices 2021-05-17T16:47:16.3481742Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:47:16.6052295Z ** testing if installed package can be loaded from final location 2021-05-17T16:47:16.8636081Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:47:16.8644741Z * DONE (waldo) 2021-05-17T16:47:17.4581539Z * installing *source* package ‘testthat’ ... 2021-05-17T16:47:17.4709271Z ** package ‘testthat’ successfully unpacked and MD5 sums checked 2021-05-17T16:47:17.4709977Z ** using staged installation 2021-05-17T16:47:17.4947972Z ** libs 2021-05-17T16:47:17.4999631Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:47:17.5478463Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o 2021-05-17T16:47:17.6025259Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-catch.cpp -o test-catch.o 2021-05-17T16:47:18.4495481Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-example.cpp -o test-example.o 2021-05-17T16:47:19.1872632Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-runner.cpp -o test-runner.o 2021-05-17T16:47:36.6538850Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o testthat.so init.o reassign.o test-catch.o test-example.o test-runner.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:47:36.8146753Z installing to /home/runner/work/_temp/Library/00LOCK-testthat/00new/testthat/libs 2021-05-17T16:47:36.8258733Z ** R 2021-05-17T16:47:36.8635215Z ** inst 2021-05-17T16:47:36.8670456Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:47:47.7217535Z ** help 2021-05-17T16:47:47.9260954Z *** installing help indices 2021-05-17T16:47:48.1019701Z *** copying figures 2021-05-17T16:47:48.1027099Z ** building package indices 2021-05-17T16:47:48.4433130Z ** installing vignettes 2021-05-17T16:47:48.4556762Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:47:48.6704098Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:47:48.6943430Z ** testing if installed package can be loaded from final location 2021-05-17T16:47:49.1342594Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:47:49.1429794Z * DONE (testthat) 2021-05-17T16:47:49.5533117Z * installing *source* package ‘devtools’ ... 2021-05-17T16:47:49.5589720Z ** package ‘devtools’ successfully unpacked and MD5 sums checked 2021-05-17T16:47:49.5590817Z ** using staged installation 2021-05-17T16:47:49.5956400Z ** R 2021-05-17T16:47:49.6110062Z ** inst 2021-05-17T16:47:49.6121634Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:47:51.4960479Z ** help 2021-05-17T16:47:51.6109770Z *** installing help indices 2021-05-17T16:47:51.6913318Z *** copying figures 2021-05-17T16:47:51.6915879Z ** building package indices 2021-05-17T16:47:51.9487009Z ** installing vignettes 2021-05-17T16:47:51.9564697Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:47:52.7047032Z ** testing if installed package can be loaded from final location 2021-05-17T16:47:53.4610205Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:47:53.4629343Z * DONE (devtools) 2021-05-17T16:47:53.4751811Z 2021-05-17T16:47:53.4752674Z The downloaded source packages are in 2021-05-17T16:47:53.4754412Z ‘/tmp/RtmpBWcGqC/downloaded_packages’ 2021-05-17T16:47:53.6308409Z Downloading GitHub repo muschellij2/desc@HEAD 2021-05-17T16:47:54.4640059Z 2021-05-17T16:47:54.7733624Z 2021-05-17T16:47:54.7735626Z checking for file ‘/tmp/RtmpBWcGqC/remotes724b2b417687/muschellij2-desc-7be86f2/DESCRIPTION’ ... 2021-05-17T16:47:54.7803196Z 2021-05-17T16:47:54.7805858Z ✔ checking for file ‘/tmp/RtmpBWcGqC/remotes724b2b417687/muschellij2-desc-7be86f2/DESCRIPTION’ 2021-05-17T16:47:54.7858458Z 2021-05-17T16:47:54.7890116Z 2021-05-17T16:47:54.7892001Z ─ preparing ‘desc’: 2021-05-17T16:47:54.7901607Z 2021-05-17T16:47:54.7903802Z 2021-05-17T16:47:54.7997847Z checking DESCRIPTION meta-information ... 2021-05-17T16:47:54.8026649Z 2021-05-17T16:47:54.8028579Z ✔ checking DESCRIPTION meta-information 2021-05-17T16:47:54.8737131Z 2021-05-17T16:47:54.8895107Z 2021-05-17T16:47:54.8897513Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-17T16:47:54.8909242Z 2021-05-17T16:47:54.8937302Z 2021-05-17T16:47:54.8939156Z ─ checking for empty or unneeded directories 2021-05-17T16:47:54.8942158Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-17T16:47:54.8969934Z ─ building ‘desc_1.2.0.9000.tar.gz’ 2021-05-17T16:47:55.0072244Z 2021-05-17T16:47:55.0074587Z 2021-05-17T16:47:55.0075797Z 2021-05-17T16:47:55.0175837Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:47:55.0176976Z (as ‘lib’ is unspecified) 2021-05-17T16:47:55.3314120Z * installing *source* package ‘desc’ ... 2021-05-17T16:47:55.3344248Z ** using staged installation 2021-05-17T16:47:55.3522038Z ** R 2021-05-17T16:47:55.3663531Z ** inst 2021-05-17T16:47:55.3680089Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:47:56.9955789Z ** help 2021-05-17T16:47:57.1306581Z *** installing help indices 2021-05-17T16:47:57.2149780Z ** building package indices 2021-05-17T16:47:57.4988587Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:47:57.6907259Z ** testing if installed package can be loaded from final location 2021-05-17T16:47:57.9178269Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:47:57.9195002Z * DONE (desc) 2021-05-17T16:47:58.1262554Z 2021-05-17T16:47:58.1263618Z 2021-05-17T16:47:58.1268381Z checking for file ‘/tmp/RtmpBWcGqC/remotes724b39c2f021/muschellij2-ghtravis-0b26809/DESCRIPTION’ ... 2021-05-17T16:47:58.1269678Z 2021-05-17T16:47:58.1275970Z checking for file ‘/tmp/RtmpBWcGqC/remotes724b39c2f021/muschellij2-ghtravis-0b26809/DESCRIPTION’ ... 2021-05-17T16:47:58.1310339Z 2021-05-17T16:47:58.1311869Z ✔ checking for file ‘/tmp/RtmpBWcGqC/remotes724b39c2f021/muschellij2-ghtravis-0b26809/DESCRIPTION’ 2021-05-17T16:47:58.1419833Z 2021-05-17T16:47:58.1420525Z 2021-05-17T16:47:58.1421430Z ─ preparing ‘ghtravis’: 2021-05-17T16:47:58.1421966Z 2021-05-17T16:47:58.1422432Z 2021-05-17T16:47:58.1495006Z checking DESCRIPTION meta-information ... 2021-05-17T16:47:58.1524294Z 2021-05-17T16:47:58.1526166Z ✔ checking DESCRIPTION meta-information 2021-05-17T16:47:58.1950759Z 2021-05-17T16:47:58.1983725Z 2021-05-17T16:47:58.1986466Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-17T16:47:58.1996646Z 2021-05-17T16:47:58.2026331Z 2021-05-17T16:47:58.2028595Z ─ checking for empty or unneeded directories 2021-05-17T16:47:58.2033746Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-17T16:47:58.2110160Z 2021-05-17T16:47:58.2144417Z 2021-05-17T16:47:58.2146545Z ─ building ‘ghtravis_0.15.1.tar.gz’ 2021-05-17T16:47:58.2390293Z 2021-05-17T16:47:58.2392995Z 2021-05-17T16:47:58.2394291Z 2021-05-17T16:47:58.2779825Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:47:58.2780991Z (as ‘lib’ is unspecified) 2021-05-17T16:47:58.5334477Z * installing *source* package ‘ghtravis’ ... 2021-05-17T16:47:58.5336658Z ** using staged installation 2021-05-17T16:47:58.5509027Z ** R 2021-05-17T16:47:58.5604467Z ** inst 2021-05-17T16:47:58.5615038Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:47:59.8380267Z ** help 2021-05-17T16:47:59.9005043Z *** installing help indices 2021-05-17T16:47:59.9495864Z ** building package indices 2021-05-17T16:48:00.1910930Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:48:00.9061578Z ** testing if installed package can be loaded from final location 2021-05-17T16:48:01.6292650Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:48:01.6304837Z * DONE (ghtravis) 2021-05-17T16:48:01.6416113Z Using github PAT from envvar GITHUB_PAT 2021-05-17T16:48:02.0074575Z Downloading GitHub repo muschellij2/aghast@HEAD 2021-05-17T16:48:03.0199122Z 2021-05-17T16:48:03.0200619Z tidyselect (NA -> 1.1.1) [CRAN] 2021-05-17T16:48:03.0201490Z Installing 5 packages: tidyselect, generics, cpp11, dplyr, tidyr 2021-05-17T16:48:03.0202777Z generics (NA -> 0.1.0) [CRAN] 2021-05-17T16:48:03.0203531Z cpp11 (NA -> 0.2.7) [CRAN] 2021-05-17T16:48:03.0204220Z dplyr (NA -> 1.0.6) [CRAN] 2021-05-17T16:48:03.0204927Z tidyr (NA -> 1.1.3) [CRAN] 2021-05-17T16:48:03.0210377Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:48:03.0211302Z (as ‘lib’ is unspecified) 2021-05-17T16:48:19.1404847Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyselect_1.1.1.tar.gz' 2021-05-17T16:48:19.8339545Z Content type 'binary/octet-stream' length 92124 bytes (89 KB) 2021-05-17T16:48:19.8403708Z ================================================== 2021-05-17T16:48:19.8404781Z downloaded 89 KB 2021-05-17T16:48:19.8405215Z 2021-05-17T16:48:19.8437629Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/generics_0.1.0.tar.gz' 2021-05-17T16:48:20.2806438Z Content type 'binary/octet-stream' length 118869 bytes (116 KB) 2021-05-17T16:48:20.2902403Z ================================================== 2021-05-17T16:48:20.2903523Z downloaded 116 KB 2021-05-17T16:48:20.2904058Z 2021-05-17T16:48:20.2940549Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cpp11_0.2.7.tar.gz' 2021-05-17T16:48:20.9796969Z Content type 'binary/octet-stream' length 200157 bytes (195 KB) 2021-05-17T16:48:20.9916362Z ================================================== 2021-05-17T16:48:20.9917333Z downloaded 195 KB 2021-05-17T16:48:20.9917880Z 2021-05-17T16:48:20.9951424Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/dplyr_1.0.6.tar.gz' 2021-05-17T16:48:21.6683852Z Content type 'binary/octet-stream' length 954544 bytes (932 KB) 2021-05-17T16:48:21.6930404Z ================================================== 2021-05-17T16:48:21.6931072Z downloaded 932 KB 2021-05-17T16:48:21.6931319Z 2021-05-17T16:48:21.6967914Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyr_1.1.3.tar.gz' 2021-05-17T16:48:22.3826355Z Content type 'binary/octet-stream' length 706784 bytes (690 KB) 2021-05-17T16:48:22.4031588Z ================================================== 2021-05-17T16:48:22.4032075Z downloaded 690 KB 2021-05-17T16:48:22.4032329Z 2021-05-17T16:48:22.7082900Z * installing *source* package ‘tidyselect’ ... 2021-05-17T16:48:22.7116967Z ** package ‘tidyselect’ successfully unpacked and MD5 sums checked 2021-05-17T16:48:22.7118453Z ** using staged installation 2021-05-17T16:48:22.7307046Z ** R 2021-05-17T16:48:22.7411523Z ** inst 2021-05-17T16:48:22.7426295Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:48:23.7572296Z ** help 2021-05-17T16:48:23.8227820Z *** installing help indices 2021-05-17T16:48:23.8702918Z ** building package indices 2021-05-17T16:48:24.0909110Z ** installing vignettes 2021-05-17T16:48:24.0972372Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:48:24.3728501Z ** testing if installed package can be loaded from final location 2021-05-17T16:48:24.6411314Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:48:24.6421370Z * DONE (tidyselect) 2021-05-17T16:48:24.9336758Z * installing *source* package ‘generics’ ... 2021-05-17T16:48:24.9368782Z ** package ‘generics’ successfully unpacked and MD5 sums checked 2021-05-17T16:48:24.9369768Z ** using staged installation 2021-05-17T16:48:24.9514317Z ** R 2021-05-17T16:48:24.9584850Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:48:25.2693618Z ** help 2021-05-17T16:48:25.3930857Z *** installing help indices 2021-05-17T16:48:25.4399860Z ** building package indices 2021-05-17T16:48:25.6754187Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:48:25.8564176Z ** testing if installed package can be loaded from final location 2021-05-17T16:48:26.0468817Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:48:26.0474212Z * DONE (generics) 2021-05-17T16:48:26.3452878Z * installing *source* package ‘cpp11’ ... 2021-05-17T16:48:26.3488111Z ** package ‘cpp11’ successfully unpacked and MD5 sums checked 2021-05-17T16:48:26.3489782Z ** using staged installation 2021-05-17T16:48:26.3660307Z ** R 2021-05-17T16:48:26.3707509Z ** inst 2021-05-17T16:48:26.3739029Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:48:26.7715590Z ** help 2021-05-17T16:48:26.7938788Z *** installing help indices 2021-05-17T16:48:26.8138613Z ** building package indices 2021-05-17T16:48:27.0057751Z ** installing vignettes 2021-05-17T16:48:27.0117346Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:48:27.1900628Z ** testing if installed package can be loaded from final location 2021-05-17T16:48:27.3683946Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:48:27.3695771Z * DONE (cpp11) 2021-05-17T16:48:27.8933353Z * installing *source* package ‘dplyr’ ... 2021-05-17T16:48:27.9057399Z ** package ‘dplyr’ successfully unpacked and MD5 sums checked 2021-05-17T16:48:27.9060203Z ** using staged installation 2021-05-17T16:48:27.9294032Z ** libs 2021-05-17T16:48:27.9342809Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c chop.cpp -o chop.o 2021-05-17T16:48:28.0820706Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c filter.cpp -o filter.o 2021-05-17T16:48:28.2609287Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c funs.cpp -o funs.o 2021-05-17T16:48:28.3937763Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c group_by.cpp -o group_by.o 2021-05-17T16:48:28.9600051Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c group_data.cpp -o group_data.o 2021-05-17T16:48:29.0714793Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c imports.cpp -o imports.o 2021-05-17T16:48:29.1869151Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.cpp -o init.o 2021-05-17T16:48:29.3035328Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mask.cpp -o mask.o 2021-05-17T16:48:29.4482743Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mutate.cpp -o mutate.o 2021-05-17T16:48:29.5870956Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c slice.cpp -o slice.o 2021-05-17T16:48:29.6964631Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c summarise.cpp -o summarise.o 2021-05-17T16:48:29.8683558Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o dplyr.so chop.o filter.o funs.o group_by.o group_data.o imports.o init.o mask.o mutate.o slice.o summarise.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:48:29.9289111Z installing to /home/runner/work/_temp/Library/00LOCK-dplyr/00new/dplyr/libs 2021-05-17T16:48:29.9307305Z ** R 2021-05-17T16:48:29.9781234Z ** data 2021-05-17T16:48:29.9788432Z *** moving datasets to lazyload DB 2021-05-17T16:48:30.0806320Z ** inst 2021-05-17T16:48:30.0835685Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:48:35.5265467Z ** help 2021-05-17T16:48:35.9859057Z *** installing help indices 2021-05-17T16:48:36.2217241Z *** copying figures 2021-05-17T16:48:36.2225848Z ** building package indices 2021-05-17T16:48:36.5962113Z ** installing vignettes 2021-05-17T16:48:36.6100775Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:48:37.0785871Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:48:37.0999513Z ** testing if installed package can be loaded from final location 2021-05-17T16:48:37.6581640Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:48:37.6623093Z * DONE (dplyr) 2021-05-17T16:48:38.0338427Z * installing *source* package ‘tidyr’ ... 2021-05-17T16:48:38.0406219Z ** package ‘tidyr’ successfully unpacked and MD5 sums checked 2021-05-17T16:48:38.0407234Z ** using staged installation 2021-05-17T16:48:38.0593543Z ** libs 2021-05-17T16:48:38.0653722Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c cpp11.cpp -o cpp11.o 2021-05-17T16:48:39.2234472Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c fill.cpp -o fill.o 2021-05-17T16:48:39.5800996Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c melt.cpp -o melt.o 2021-05-17T16:48:41.3155451Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c simplifyPieces.cpp -o simplifyPieces.o 2021-05-17T16:48:42.6783097Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tidyr.so cpp11.o fill.o melt.o simplifyPieces.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:48:42.7523661Z installing to /home/runner/work/_temp/Library/00LOCK-tidyr/00new/tidyr/libs 2021-05-17T16:48:42.7524855Z ** R 2021-05-17T16:48:42.7682860Z ** data 2021-05-17T16:48:42.7694991Z *** moving datasets to lazyload DB 2021-05-17T16:48:42.9452004Z ** inst 2021-05-17T16:48:42.9473163Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:48:44.5596727Z ** help 2021-05-17T16:48:44.6786630Z *** installing help indices 2021-05-17T16:48:44.7663019Z *** copying figures 2021-05-17T16:48:44.7670452Z ** building package indices 2021-05-17T16:48:45.0367258Z ** installing vignettes 2021-05-17T16:48:45.0485390Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:48:45.5381660Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:48:45.5559637Z ** testing if installed package can be loaded from final location 2021-05-17T16:48:46.0427665Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:48:46.0444034Z * DONE (tidyr) 2021-05-17T16:48:46.0562736Z 2021-05-17T16:48:46.0563568Z The downloaded source packages are in 2021-05-17T16:48:46.0565065Z ‘/tmp/RtmpBWcGqC/downloaded_packages’ 2021-05-17T16:48:46.2397458Z 2021-05-17T16:48:46.2407334Z checking for file ‘/tmp/RtmpBWcGqC/remotes724b542612f0/muschellij2-aghast-0c3b853/DESCRIPTION’ ... 2021-05-17T16:48:46.2440862Z 2021-05-17T16:48:46.2443011Z ✔ checking for file ‘/tmp/RtmpBWcGqC/remotes724b542612f0/muschellij2-aghast-0c3b853/DESCRIPTION’ 2021-05-17T16:48:46.2522316Z 2021-05-17T16:48:46.2531349Z 2021-05-17T16:48:46.2533043Z ─ preparing ‘aghast’: 2021-05-17T16:48:46.2543020Z 2021-05-17T16:48:46.2546084Z 2021-05-17T16:48:46.2611352Z checking DESCRIPTION meta-information ... 2021-05-17T16:48:46.2638427Z 2021-05-17T16:48:46.2640402Z ✔ checking DESCRIPTION meta-information 2021-05-17T16:48:46.2891784Z 2021-05-17T16:48:46.2917823Z 2021-05-17T16:48:46.2920205Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-17T16:48:46.2929448Z 2021-05-17T16:48:46.2958131Z 2021-05-17T16:48:46.2960167Z ─ checking for empty or unneeded directories 2021-05-17T16:48:46.2963440Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-17T16:48:46.2983100Z 2021-05-17T16:48:46.3009671Z 2021-05-17T16:48:46.3011377Z ─ building ‘aghast_0.2.1.tar.gz’ 2021-05-17T16:48:46.3113742Z 2021-05-17T16:48:46.3115986Z 2021-05-17T16:48:46.3117451Z 2021-05-17T16:48:46.3188113Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:48:46.3189211Z (as ‘lib’ is unspecified) 2021-05-17T16:48:46.5263419Z * installing *source* package ‘aghast’ ... 2021-05-17T16:48:46.5266205Z ** using staged installation 2021-05-17T16:48:46.5444177Z ** R 2021-05-17T16:48:46.5502280Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:48:46.9973948Z ** help 2021-05-17T16:48:47.0310474Z *** installing help indices 2021-05-17T16:48:47.0566681Z ** building package indices 2021-05-17T16:48:47.2581675Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:48:47.4412082Z ** testing if installed package can be loaded from final location 2021-05-17T16:48:47.6301866Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:48:47.6308509Z * DONE (aghast) 2021-05-17T16:48:47.6400715Z Installing 1 packages: covr 2021-05-17T16:48:47.6408943Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:48:47.6410128Z (as ‘lib’ is unspecified) 2021-05-17T16:49:03.1012286Z also installing the dependencies ‘lazyeval’, ‘rex’ 2021-05-17T16:49:03.1013424Z 2021-05-17T16:49:03.1019679Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lazyeval_0.2.2.tar.gz' 2021-05-17T16:49:03.8079268Z Content type 'application/x-tar' length 83462 bytes (81 KB) 2021-05-17T16:49:03.8144334Z ================================================== 2021-05-17T16:49:03.8144887Z downloaded 81 KB 2021-05-17T16:49:03.8145202Z 2021-05-17T16:49:03.8180444Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rex_1.2.0.tar.gz' 2021-05-17T16:49:04.5021555Z Content type 'binary/octet-stream' length 91701 bytes (89 KB) 2021-05-17T16:49:04.5107803Z ================================================== 2021-05-17T16:49:04.5108296Z downloaded 89 KB 2021-05-17T16:49:04.5108556Z 2021-05-17T16:49:04.5148873Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/covr_3.5.1.tar.gz' 2021-05-17T16:49:05.0250868Z Content type 'binary/octet-stream' length 147467 bytes (144 KB) 2021-05-17T16:49:05.0351890Z ================================================== 2021-05-17T16:49:05.0352841Z downloaded 144 KB 2021-05-17T16:49:05.0353291Z 2021-05-17T16:49:05.3385744Z * installing *source* package ‘lazyeval’ ... 2021-05-17T16:49:05.3416681Z ** package ‘lazyeval’ successfully unpacked and MD5 sums checked 2021-05-17T16:49:05.3418191Z ** using staged installation 2021-05-17T16:49:05.3570084Z ** libs 2021-05-17T16:49:05.3625023Z 2021-05-17T16:49:05.3626431Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c expr.c -o expr.o 2021-05-17T16:49:05.4335123Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:49:05.4751183Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c interp.c -o interp.o 2021-05-17T16:49:05.5429671Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c lazy.c -o lazy.o 2021-05-17T16:49:05.6366740Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c name.c -o name.o 2021-05-17T16:49:05.7201421Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-17T16:49:05.7910395Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o lazyeval.so expr.o init.o interp.o lazy.o name.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:49:05.8164428Z installing to /home/runner/work/_temp/Library/00LOCK-lazyeval/00new/lazyeval/libs 2021-05-17T16:49:05.8165907Z ** R 2021-05-17T16:49:05.8238308Z ** inst 2021-05-17T16:49:05.8251928Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:49:06.3794908Z ** help 2021-05-17T16:49:06.4416487Z *** installing help indices 2021-05-17T16:49:06.4900807Z ** building package indices 2021-05-17T16:49:06.7283549Z ** installing vignettes 2021-05-17T16:49:06.7338470Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:49:06.9135791Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:49:06.9311429Z ** testing if installed package can be loaded from final location 2021-05-17T16:49:07.1076210Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:49:07.1088331Z * DONE (lazyeval) 2021-05-17T16:49:07.3784553Z * installing *source* package ‘rex’ ... 2021-05-17T16:49:07.3809767Z ** package ‘rex’ successfully unpacked and MD5 sums checked 2021-05-17T16:49:07.3810988Z ** using staged installation 2021-05-17T16:49:07.3969183Z ** R 2021-05-17T16:49:07.4033388Z ** inst 2021-05-17T16:49:07.4045532Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:49:07.9166579Z ** help 2021-05-17T16:49:07.9672518Z *** installing help indices 2021-05-17T16:49:08.0071410Z ** building package indices 2021-05-17T16:49:08.2247310Z ** installing vignettes 2021-05-17T16:49:08.2337386Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:49:08.4126960Z ** testing if installed package can be loaded from final location 2021-05-17T16:49:08.5915253Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:49:08.5923877Z * DONE (rex) 2021-05-17T16:49:08.9784724Z * installing *source* package ‘covr’ ... 2021-05-17T16:49:08.9846435Z ** package ‘covr’ successfully unpacked and MD5 sums checked 2021-05-17T16:49:08.9847481Z ** using staged installation 2021-05-17T16:49:09.0106531Z ** libs 2021-05-17T16:49:09.0158453Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o 2021-05-17T16:49:09.0770737Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o covr.so reassign.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:49:09.0928378Z installing to /home/runner/work/_temp/Library/00LOCK-covr/00new/covr/libs 2021-05-17T16:49:09.0943577Z ** R 2021-05-17T16:49:09.1104723Z ** inst 2021-05-17T16:49:09.1131139Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:49:10.5038363Z ** help 2021-05-17T16:49:10.5726627Z *** installing help indices 2021-05-17T16:49:10.6244058Z *** copying figures 2021-05-17T16:49:10.6247104Z ** building package indices 2021-05-17T16:49:10.8628684Z ** installing vignettes 2021-05-17T16:49:10.8692430Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:49:11.0770204Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:49:11.0949285Z ** testing if installed package can be loaded from final location 2021-05-17T16:49:11.3112769Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:49:11.3129378Z * DONE (covr) 2021-05-17T16:49:11.3235553Z 2021-05-17T16:49:11.3236667Z The downloaded source packages are in 2021-05-17T16:49:11.3238285Z ‘/tmp/RtmpBWcGqC/downloaded_packages’ 2021-05-17T16:49:11.3415575Z ##[group]Run Rscript -e "tic::before_install()" 2021-05-17T16:49:11.3416518Z Rscript -e "tic::before_install()" 2021-05-17T16:49:11.3457508Z shell: /usr/bin/bash -e {0} 2021-05-17T16:49:11.3457830Z env: 2021-05-17T16:49:11.3458211Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:49:11.3458602Z TIC_DEPLOY_KEY: 2021-05-17T16:49:11.3459283Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:49:11.3461193Z GITHUB_PAT: *** 2021-05-17T16:49:11.3462043Z COVERALLS_TOKEN: *** 2021-05-17T16:49:11.3462490Z continue-on-error: true 2021-05-17T16:49:11.3462921Z VDIFFR_RUN_TESTS: 2021-05-17T16:49:11.3463342Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:49:11.3463744Z TZ: UTC 2021-05-17T16:49:11.3464438Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:49:11.3464776Z NOT_CRAN: true 2021-05-17T16:49:11.3465103Z ##[endgroup] 2021-05-17T16:49:11.6336579Z ✔ Loading tic stage configuration from tic.R 2021-05-17T16:49:11.7773469Z Running before_install: step_install_remote_binaries() 2021-05-17T16:49:12.3901152Z Installing neurobase binaries 2021-05-17T16:49:12.3915665Z [1] "neuroconductor/neurobase" 2021-05-17T16:49:12.7567106Z OK (HTTP 200).OK (HTTP 200).No Binaries Found, exiting 2021-05-17T16:49:12.7705058Z ##[group]Run remotes::install_deps(dependencies = TRUE) 2021-05-17T16:49:12.7706007Z remotes::install_deps(dependencies = TRUE) 2021-05-17T16:49:12.7706631Z remotes::install_cran("rcmdcheck") 2021-05-17T16:49:12.7707317Z remotes::install_cran("markdown") 2021-05-17T16:49:12.7715810Z shell: /usr/local/bin/Rscript {0} 2021-05-17T16:49:12.7716253Z env: 2021-05-17T16:49:12.7717049Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:49:12.7717485Z TIC_DEPLOY_KEY: 2021-05-17T16:49:12.7718437Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:49:12.7720069Z GITHUB_PAT: *** 2021-05-17T16:49:12.7720927Z COVERALLS_TOKEN: *** 2021-05-17T16:49:12.7721371Z continue-on-error: true 2021-05-17T16:49:12.7721973Z VDIFFR_RUN_TESTS: 2021-05-17T16:49:12.7722418Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:49:12.7722829Z TZ: UTC 2021-05-17T16:49:12.7723190Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:49:12.7723612Z NOT_CRAN: true 2021-05-17T16:49:12.7723952Z ##[endgroup] 2021-05-17T16:49:31.5295879Z neurobase (NA -> 1d4b17291...) [GitHub] 2021-05-17T16:49:31.5297152Z base64enc (NA -> 0.1-3 ) [CRAN] 2021-05-17T16:49:31.5298702Z R.methodsS3 (NA -> 1.8.1 ) [CRAN] 2021-05-17T16:49:31.5299845Z R.oo (NA -> 1.24.0 ) [CRAN] 2021-05-17T16:49:31.5300762Z RNifti (NA -> 1.3.1 ) [CRAN] 2021-05-17T16:49:31.5301678Z abind (NA -> 1.4-5 ) [CRAN] 2021-05-17T16:49:31.5302769Z bitops (NA -> 1.0-7 ) [CRAN] 2021-05-17T16:49:31.5303669Z tinytex (NA -> 0.31 ) [CRAN] 2021-05-17T16:49:31.5304580Z htmltools (NA -> 0.5.1.1 ) [CRAN] 2021-05-17T16:49:31.5305951Z R.utils (NA -> 2.10.1 ) [CRAN] 2021-05-17T16:49:31.5306974Z matrixStats (NA -> 0.58.0 ) [CRAN] 2021-05-17T16:49:31.5307993Z oro.nifti (NA -> 0.11.0 ) [CRAN] 2021-05-17T16:49:31.5309329Z rmarkdown (NA -> 2.8 ) [CRAN] 2021-05-17T16:49:32.4236999Z Downloading GitHub repo neuroconductor/neurobase@1d4b172915192d419b4defb2e56d84d7541c03cd 2021-05-17T16:49:34.3725775Z RNifti (NA -> 929106d1b...) [GitHub] 2021-05-17T16:49:34.3727465Z oro.nifti (NA -> bd06b05d2...) [GitHub] 2021-05-17T16:49:34.3728627Z R.methodsS3 (NA -> 1.8.1 ) [CRAN] 2021-05-17T16:49:34.3729839Z R.oo (NA -> 1.24.0 ) [CRAN] 2021-05-17T16:49:34.3731087Z abind (NA -> 1.4-5 ) [CRAN] 2021-05-17T16:49:34.3732088Z bitops (NA -> 1.0-7 ) [CRAN] 2021-05-17T16:49:34.3733063Z R.utils (NA -> 2.10.1 ) [CRAN] 2021-05-17T16:49:34.3734081Z matrixStats (NA -> 0.58.0 ) [CRAN] 2021-05-17T16:49:34.6772984Z Downloading GitHub repo neuroconductor/RNifti@929106d1b17d6c09c8b001b5e39d448ed9ef635f 2021-05-17T16:49:36.0659111Z 2021-05-17T16:49:36.2703130Z 2021-05-17T16:49:36.2715502Z checking for file ‘/tmp/RtmpdQmWxl/remotesd4e51461f0fa/neuroconductor-RNifti-929106d/DESCRIPTION’ ... 2021-05-17T16:49:36.2791131Z 2021-05-17T16:49:36.2793742Z ✔ checking for file ‘/tmp/RtmpdQmWxl/remotesd4e51461f0fa/neuroconductor-RNifti-929106d/DESCRIPTION’ 2021-05-17T16:49:36.2863453Z 2021-05-17T16:49:36.2896662Z 2021-05-17T16:49:36.2898821Z ─ preparing ‘RNifti’: 2021-05-17T16:49:36.2907233Z 2021-05-17T16:49:36.2909161Z 2021-05-17T16:49:36.3021030Z checking DESCRIPTION meta-information ... 2021-05-17T16:49:36.3054200Z 2021-05-17T16:49:36.3058413Z ✔ checking DESCRIPTION meta-information 2021-05-17T16:49:36.3069092Z 2021-05-17T16:49:36.3099812Z 2021-05-17T16:49:36.3101517Z ─ cleaning src 2021-05-17T16:49:36.3131747Z ─ running ‘cleanup’ 2021-05-17T16:49:36.3618600Z 2021-05-17T16:49:36.3649108Z 2021-05-17T16:49:36.3652353Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-17T16:49:36.4067568Z 2021-05-17T16:49:36.4215862Z 2021-05-17T16:49:36.4218357Z ─ checking for empty or unneeded directories 2021-05-17T16:49:36.4230011Z 2021-05-17T16:49:36.4261032Z 2021-05-17T16:49:36.4263207Z ─ building ‘RNifti_1.3.1.tar.gz’ 2021-05-17T16:49:36.7652847Z 2021-05-17T16:49:36.7656390Z 2021-05-17T16:49:36.7658011Z 2021-05-17T16:49:36.7815362Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:49:36.7817230Z (as ‘lib’ is unspecified) 2021-05-17T16:49:37.1605573Z * installing *source* package ‘RNifti’ ... 2021-05-17T16:49:37.1607428Z ** using staged installation 2021-05-17T16:49:37.1793312Z ** libs 2021-05-17T16:49:37.1844565Z 2021-05-17T16:49:37.1846782Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c main.cpp -o main.o 2021-05-17T16:49:56.6178969Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zzz.c -o zzz.o 2021-05-17T16:49:56.7127737Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/adler32.c -o zlib/adler32.o 2021-05-17T16:49:56.8019574Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/compress.c -o zlib/compress.o 2021-05-17T16:49:56.8431621Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/crc32.c -o zlib/crc32.o 2021-05-17T16:49:56.9623530Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/deflate.c -o zlib/deflate.o 2021-05-17T16:49:57.4874584Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzclose.c -o zlib/gzclose.o 2021-05-17T16:49:57.5292778Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzlib.c -o zlib/gzlib.o 2021-05-17T16:49:57.6669695Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzread.c -o zlib/gzread.o 2021-05-17T16:49:57.8306885Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzwrite.c -o zlib/gzwrite.o 2021-05-17T16:49:57.9697175Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/infback.c -o zlib/infback.o 2021-05-17T16:49:58.2287010Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inffast.c -o zlib/inffast.o 2021-05-17T16:49:58.3497896Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inflate.c -o zlib/inflate.o 2021-05-17T16:49:58.9049924Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inftrees.c -o zlib/inftrees.o 2021-05-17T16:49:59.0067281Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/trees.c -o zlib/trees.o 2021-05-17T16:49:59.3322346Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/uncompr.c -o zlib/uncompr.o 2021-05-17T16:49:59.3718245Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/zutil.c -o zlib/zutil.o 2021-05-17T16:49:59.4218242Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c znzlib/znzlib.c -o znzlib/znzlib.o 2021-05-17T16:49:59.5074817Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c niftilib/nifti1_io.c -o niftilib/nifti1_io.o 2021-05-17T16:50:00.7042347Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c niftilib/nifti2_io.c -o niftilib/nifti2_io.o 2021-05-17T16:50:03.1789121Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o RNifti.so main.o zzz.o zlib/adler32.o zlib/compress.o zlib/crc32.o zlib/deflate.o zlib/gzclose.o zlib/gzlib.o zlib/gzread.o zlib/gzwrite.o zlib/infback.o zlib/inffast.o zlib/inflate.o zlib/inftrees.o zlib/trees.o zlib/uncompr.o zlib/zutil.o znzlib/znzlib.o niftilib/nifti1_io.o niftilib/nifti2_io.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:50:03.3617064Z installing to /home/runner/work/_temp/Library/00LOCK-RNifti/00new/RNifti/libs 2021-05-17T16:50:03.3739487Z ** R 2021-05-17T16:50:03.3823418Z ** inst 2021-05-17T16:50:03.3857170Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:50:04.2513287Z ** help 2021-05-17T16:50:04.3257619Z *** installing help indices 2021-05-17T16:50:04.3660508Z ** building package indices 2021-05-17T16:50:04.6038835Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:50:04.8960821Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:50:04.9210327Z ** testing if installed package can be loaded from final location 2021-05-17T16:50:05.2141252Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:50:05.2154522Z * DONE (RNifti) 2021-05-17T16:50:05.5491857Z Downloading GitHub repo neuroconductor/oro.nifti@bd06b05d2a090c743e51d745a826e8b77af278f0 2021-05-17T16:50:07.5009396Z base64enc (NA -> 0.1-3 ) [CRAN] 2021-05-17T16:50:07.5010582Z tinytex (NA -> 0.31 ) [CRAN] 2021-05-17T16:50:07.5011565Z htmltools (NA -> 0.5.1.1) [CRAN] 2021-05-17T16:50:07.5012675Z rmarkdown (NA -> 2.8 ) [CRAN] 2021-05-17T16:50:07.5013994Z rticles (NA -> 0.19 ) [CRAN] 2021-05-17T16:50:07.5014954Z abind (NA -> 1.4-5 ) [CRAN] 2021-05-17T16:50:07.5015882Z bitops (NA -> 1.0-7 ) [CRAN] 2021-05-17T16:50:07.5018273Z Installing 7 packages: base64enc, tinytex, htmltools, rmarkdown, rticles, abind, bitops 2021-05-17T16:50:07.5029347Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:50:07.5030499Z (as ‘lib’ is unspecified) 2021-05-17T16:50:23.6749502Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/base64enc_0.1-3.tar.gz' 2021-05-17T16:50:24.3598877Z Content type 'application/x-tar' length 7843 bytes 2021-05-17T16:50:24.3599730Z ================================================== 2021-05-17T16:50:24.3600130Z downloaded 7843 bytes 2021-05-17T16:50:24.3600371Z 2021-05-17T16:50:24.3632074Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tinytex_0.31.tar.gz' 2021-05-17T16:50:24.8661628Z Content type 'binary/octet-stream' length 29350 bytes (28 KB) 2021-05-17T16:50:24.8666966Z ================================================== 2021-05-17T16:50:24.8667772Z downloaded 28 KB 2021-05-17T16:50:24.8668100Z 2021-05-17T16:50:24.8702199Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/htmltools_0.5.1.1.tar.gz' 2021-05-17T16:50:25.5472956Z Content type 'binary/octet-stream' length 72110 bytes (70 KB) 2021-05-17T16:50:25.5565957Z ================================================== 2021-05-17T16:50:25.5566787Z downloaded 70 KB 2021-05-17T16:50:25.5567416Z 2021-05-17T16:50:25.5602441Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rmarkdown_2.8.tar.gz' 2021-05-17T16:50:26.3114707Z Content type 'binary/octet-stream' length 3236609 bytes (3.1 MB) 2021-05-17T16:50:26.3469663Z ================================================== 2021-05-17T16:50:26.3470576Z downloaded 3.1 MB 2021-05-17T16:50:26.3471216Z 2021-05-17T16:50:26.3511072Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rticles_0.19.tar.gz' 2021-05-17T16:50:26.8703113Z Content type 'binary/octet-stream' length 1634953 bytes (1.6 MB) 2021-05-17T16:50:26.8989485Z ================================================== 2021-05-17T16:50:26.8989948Z downloaded 1.6 MB 2021-05-17T16:50:26.8990200Z 2021-05-17T16:50:26.9025694Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/abind_1.4-5.tar.gz' 2021-05-17T16:50:27.5836992Z Content type 'application/x-tar' length 21895 bytes (21 KB) 2021-05-17T16:50:27.5838521Z ================================================== 2021-05-17T16:50:27.5839267Z downloaded 21 KB 2021-05-17T16:50:27.5839695Z 2021-05-17T16:50:27.5872640Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bitops_1.0-7.tar.gz' 2021-05-17T16:50:28.2617358Z Content type 'binary/octet-stream' length 10887 bytes (10 KB) 2021-05-17T16:50:28.2619308Z ================================================== 2021-05-17T16:50:28.2619755Z downloaded 10 KB 2021-05-17T16:50:28.2620003Z 2021-05-17T16:50:28.4936923Z * installing *source* package ‘base64enc’ ... 2021-05-17T16:50:28.4947747Z ** package ‘base64enc’ successfully unpacked and MD5 sums checked 2021-05-17T16:50:28.4948947Z ** using staged installation 2021-05-17T16:50:28.5064555Z ** libs 2021-05-17T16:50:28.5116414Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-17T16:50:28.6253639Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c uriencode.c -o uriencode.o 2021-05-17T16:50:28.6988545Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-17T16:50:28.7765998Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o base64enc.so base64.o uriencode.o utf8.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:50:28.8003572Z installing to /home/runner/work/_temp/Library/00LOCK-base64enc/00new/base64enc/libs 2021-05-17T16:50:28.8004626Z ** R 2021-05-17T16:50:28.8027654Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:50:29.0639961Z ** help 2021-05-17T16:50:29.0907984Z *** installing help indices 2021-05-17T16:50:29.1086797Z ** building package indices 2021-05-17T16:50:29.3148045Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:50:29.4969270Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:50:29.5157775Z ** testing if installed package can be loaded from final location 2021-05-17T16:50:29.6963696Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:50:29.6969376Z * DONE (base64enc) 2021-05-17T16:50:29.9149077Z * installing *source* package ‘tinytex’ ... 2021-05-17T16:50:29.9161079Z ** package ‘tinytex’ successfully unpacked and MD5 sums checked 2021-05-17T16:50:29.9163455Z ** using staged installation 2021-05-17T16:50:29.9360725Z ** R 2021-05-17T16:50:29.9435374Z ** inst 2021-05-17T16:50:29.9443694Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:50:30.6563784Z ** help 2021-05-17T16:50:30.6911755Z *** installing help indices 2021-05-17T16:50:30.7227273Z ** building package indices 2021-05-17T16:50:30.9379944Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:50:31.1254105Z ** testing if installed package can be loaded from final location 2021-05-17T16:50:31.3204582Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:50:31.3214927Z * DONE (tinytex) 2021-05-17T16:50:31.5300621Z * installing *source* package ‘abind’ ... 2021-05-17T16:50:31.5313732Z ** package ‘abind’ successfully unpacked and MD5 sums checked 2021-05-17T16:50:31.5314742Z ** using staged installation 2021-05-17T16:50:31.5420120Z ** R 2021-05-17T16:50:32.4402982Z ** inst 2021-05-17T16:50:32.4410150Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:50:32.4410958Z ** help 2021-05-17T16:50:32.4411716Z *** installing help indices 2021-05-17T16:50:32.4412576Z ** building package indices 2021-05-17T16:50:32.4413444Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:50:32.6029914Z ** testing if installed package can be loaded from final location 2021-05-17T16:50:32.7815583Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:50:32.7823547Z * DONE (abind) 2021-05-17T16:50:33.0156663Z * installing *source* package ‘bitops’ ... 2021-05-17T16:50:33.0168381Z ** package ‘bitops’ successfully unpacked and MD5 sums checked 2021-05-17T16:50:33.0169545Z ** using staged installation 2021-05-17T16:50:33.0316289Z ** libs 2021-05-17T16:50:33.0372088Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bit-ops.c -o bit-ops.o 2021-05-17T16:50:33.2393364Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cksum.c -o cksum.o 2021-05-17T16:50:33.2983244Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:50:33.3487041Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o bitops.so bit-ops.o cksum.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:50:33.3683379Z installing to /home/runner/work/_temp/Library/00LOCK-bitops/00new/bitops/libs 2021-05-17T16:50:33.3684522Z ** R 2021-05-17T16:50:33.3707211Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:50:33.6099915Z ** help 2021-05-17T16:50:33.6374768Z *** installing help indices 2021-05-17T16:50:33.6577540Z ** building package indices 2021-05-17T16:50:33.8570155Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:50:34.0328804Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:50:34.0501067Z ** testing if installed package can be loaded from final location 2021-05-17T16:50:34.2476047Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:50:34.2493995Z * DONE (bitops) 2021-05-17T16:50:34.5374449Z * installing *source* package ‘htmltools’ ... 2021-05-17T16:50:34.5396463Z ** package ‘htmltools’ successfully unpacked and MD5 sums checked 2021-05-17T16:50:34.5397631Z ** using staged installation 2021-05-17T16:50:34.5564636Z ** libs 2021-05-17T16:50:34.5610492Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:50:34.6128224Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c template.c -o template.o 2021-05-17T16:50:34.7400355Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o htmltools.so init.o template.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:50:34.7688318Z installing to /home/runner/work/_temp/Library/00LOCK-htmltools/00new/htmltools/libs 2021-05-17T16:50:34.7708902Z ** R 2021-05-17T16:50:34.7867269Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:50:36.2919284Z ** help 2021-05-17T16:50:36.3798914Z *** installing help indices 2021-05-17T16:50:36.4398006Z ** building package indices 2021-05-17T16:50:36.7004150Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:50:36.9192057Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:50:36.9375608Z ** testing if installed package can be loaded from final location 2021-05-17T16:50:37.1697766Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:50:37.1711042Z * DONE (htmltools) 2021-05-17T16:50:38.0685220Z * installing *source* package ‘rmarkdown’ ... 2021-05-17T16:50:38.0964679Z ** package ‘rmarkdown’ successfully unpacked and MD5 sums checked 2021-05-17T16:50:38.0965946Z ** using staged installation 2021-05-17T16:50:38.1268167Z ** R 2021-05-17T16:50:38.1662149Z ** inst 2021-05-17T16:50:38.1896101Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:50:41.6013742Z ** help 2021-05-17T16:50:41.8009179Z *** installing help indices 2021-05-17T16:50:41.9467069Z *** copying figures 2021-05-17T16:50:41.9470987Z ** building package indices 2021-05-17T16:50:42.2412286Z ** installing vignettes 2021-05-17T16:50:42.2499131Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:50:42.5201080Z ** testing if installed package can be loaded from final location 2021-05-17T16:50:42.8273527Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:50:42.8330419Z * DONE (rmarkdown) 2021-05-17T16:50:43.4512595Z * installing *source* package ‘rticles’ ... 2021-05-17T16:50:43.4685451Z ** package ‘rticles’ successfully unpacked and MD5 sums checked 2021-05-17T16:50:43.4686576Z ** using staged installation 2021-05-17T16:50:43.4932712Z ** R 2021-05-17T16:50:43.4999091Z ** inst 2021-05-17T16:50:43.5249281Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:50:43.9954246Z ** help 2021-05-17T16:50:44.0344105Z *** installing help indices 2021-05-17T16:50:44.0692478Z ** building package indices 2021-05-17T16:50:44.2758297Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:50:44.5433321Z ** testing if installed package can be loaded from final location 2021-05-17T16:50:44.7960985Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:50:44.8000614Z * DONE (rticles) 2021-05-17T16:50:44.8162959Z 2021-05-17T16:50:44.8163943Z The downloaded source packages are in 2021-05-17T16:50:44.8165285Z ‘/tmp/RtmpdQmWxl/downloaded_packages’ 2021-05-17T16:50:45.0165344Z 2021-05-17T16:50:45.0184750Z checking for file ‘/tmp/RtmpdQmWxl/remotesd4e575f37c7a/neuroconductor-oro.nifti-bd06b05/DESCRIPTION’ ... 2021-05-17T16:50:45.0209400Z 2021-05-17T16:50:45.0212100Z ✔ checking for file ‘/tmp/RtmpdQmWxl/remotesd4e575f37c7a/neuroconductor-oro.nifti-bd06b05/DESCRIPTION’ 2021-05-17T16:50:45.0523029Z 2021-05-17T16:50:45.0523988Z 2021-05-17T16:50:45.0525085Z ─ preparing ‘oro.nifti’: 2021-05-17T16:50:45.0529702Z 2021-05-17T16:50:45.0532008Z 2021-05-17T16:50:45.0665042Z checking DESCRIPTION meta-information ... 2021-05-17T16:50:45.0694623Z 2021-05-17T16:50:45.0696834Z ✔ checking DESCRIPTION meta-information 2021-05-17T16:50:45.2230605Z 2021-05-17T16:50:45.2255222Z 2021-05-17T16:50:45.2257565Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-17T16:50:45.2266317Z 2021-05-17T16:50:45.2293800Z 2021-05-17T16:50:45.2295813Z ─ checking for empty or unneeded directories 2021-05-17T16:50:45.2299216Z Removed empty directory ‘oro.nifti/vignettes’ 2021-05-17T16:50:45.2306886Z 2021-05-17T16:50:45.2309646Z 2021-05-17T16:50:45.2311572Z Omitted ‘LazyData’ and ‘LazyDataCompression’ from DESCRIPTION 2021-05-17T16:50:45.2430040Z 2021-05-17T16:50:45.2454216Z 2021-05-17T16:50:45.2456367Z ─ building ‘oro.nifti_0.10.3.tar.gz’ 2021-05-17T16:50:45.8187365Z 2021-05-17T16:50:45.8189787Z 2021-05-17T16:50:45.8191150Z 2021-05-17T16:50:45.8704157Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:50:45.8705446Z (as ‘lib’ is unspecified) 2021-05-17T16:50:46.4445251Z * installing *source* package ‘oro.nifti’ ... 2021-05-17T16:50:46.4447463Z ** using staged installation 2021-05-17T16:50:46.4641903Z ** R 2021-05-17T16:50:46.5094241Z ** demo 2021-05-17T16:50:46.5102079Z ** inst 2021-05-17T16:50:46.5174751Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:50:54.4442661Z 2021-05-17T16:50:54.4444856Z ** help 2021-05-17T16:50:54.4446886Z Creating a new generic function for ‘origin’ in package ‘oro.nifti’ 2021-05-17T16:50:54.8177072Z *** installing help indices 2021-05-17T16:50:55.0795688Z ** building package indices 2021-05-17T16:50:55.5012945Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:50:56.0677647Z ** testing if installed package can be loaded from final location 2021-05-17T16:50:56.7302972Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:50:56.7376671Z * DONE (oro.nifti) 2021-05-17T16:50:56.7570390Z Installing 6 packages: R.methodsS3, R.oo, abind, bitops, R.utils, matrixStats 2021-05-17T16:50:56.7580599Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:50:56.7582194Z (as ‘lib’ is unspecified) 2021-05-17T16:51:12.2704029Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.methodsS3_1.8.1.tar.gz' 2021-05-17T16:51:13.4171413Z Content type 'binary/octet-stream' length 23789 bytes (23 KB) 2021-05-17T16:51:13.4175181Z ================================================== 2021-05-17T16:51:13.4175997Z downloaded 23 KB 2021-05-17T16:51:13.4176458Z 2021-05-17T16:51:13.4208980Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.oo_1.24.0.tar.gz' 2021-05-17T16:51:14.4755119Z Content type 'binary/octet-stream' length 382199 bytes (373 KB) 2021-05-17T16:51:14.4932973Z ================================================== 2021-05-17T16:51:14.4933757Z downloaded 373 KB 2021-05-17T16:51:14.4934219Z 2021-05-17T16:51:14.4973057Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/abind_1.4-5.tar.gz' 2021-05-17T16:51:15.1845725Z Content type 'application/x-tar' length 21895 bytes (21 KB) 2021-05-17T16:51:15.1847810Z ================================================== 2021-05-17T16:51:15.1848604Z downloaded 21 KB 2021-05-17T16:51:15.1849089Z 2021-05-17T16:51:15.1880547Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bitops_1.0-7.tar.gz' 2021-05-17T16:51:15.8734579Z Content type 'binary/octet-stream' length 10887 bytes (10 KB) 2021-05-17T16:51:15.8735256Z ================================================== 2021-05-17T16:51:15.8735672Z downloaded 10 KB 2021-05-17T16:51:15.8735961Z 2021-05-17T16:51:15.8775101Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.utils_2.10.1.tar.gz' 2021-05-17T16:51:16.7994557Z Content type 'binary/octet-stream' length 361740 bytes (353 KB) 2021-05-17T16:51:16.8169705Z ================================================== 2021-05-17T16:51:16.8170664Z downloaded 353 KB 2021-05-17T16:51:16.8171352Z 2021-05-17T16:51:16.8208265Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/matrixStats_0.58.0.tar.gz' 2021-05-17T16:51:17.9523649Z Content type 'binary/octet-stream' length 194842 bytes (190 KB) 2021-05-17T16:51:17.9634590Z ================================================== 2021-05-17T16:51:17.9635242Z downloaded 190 KB 2021-05-17T16:51:17.9635675Z 2021-05-17T16:51:18.1993088Z * installing *source* package ‘R.methodsS3’ ... 2021-05-17T16:51:18.2008446Z ** package ‘R.methodsS3’ successfully unpacked and MD5 sums checked 2021-05-17T16:51:18.2009453Z ** using staged installation 2021-05-17T16:51:18.2135181Z ** R 2021-05-17T16:51:18.2203300Z ** inst 2021-05-17T16:51:18.2211934Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:51:18.7402625Z ** help 2021-05-17T16:51:18.7835303Z *** installing help indices 2021-05-17T16:51:18.8219675Z ** building package indices 2021-05-17T16:51:19.0351181Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:51:19.2201656Z ** testing if installed package can be loaded from final location 2021-05-17T16:51:19.4103220Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:51:19.4111374Z * DONE (R.methodsS3) 2021-05-17T16:51:19.6226947Z * installing *source* package ‘abind’ ... 2021-05-17T16:51:19.6240173Z ** package ‘abind’ successfully unpacked and MD5 sums checked 2021-05-17T16:51:19.6266169Z ** using staged installation 2021-05-17T16:51:19.6376913Z ** R 2021-05-17T16:51:19.6425233Z ** inst 2021-05-17T16:51:19.6433739Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:51:20.2602251Z ** help 2021-05-17T16:51:20.2871099Z *** installing help indices 2021-05-17T16:51:20.3113200Z ** building package indices 2021-05-17T16:51:20.5146705Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:51:20.6924393Z ** testing if installed package can be loaded from final location 2021-05-17T16:51:20.8800592Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:51:20.8808892Z * DONE (abind) 2021-05-17T16:51:21.0889089Z * installing *source* package ‘bitops’ ... 2021-05-17T16:51:21.0901672Z ** package ‘bitops’ successfully unpacked and MD5 sums checked 2021-05-17T16:51:21.0933115Z ** using staged installation 2021-05-17T16:51:21.1031687Z ** libs 2021-05-17T16:51:21.1077754Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bit-ops.c -o bit-ops.o 2021-05-17T16:51:21.2973857Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cksum.c -o cksum.o 2021-05-17T16:51:21.3564116Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:51:21.4023005Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o bitops.so bit-ops.o cksum.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:51:21.4203028Z installing to /home/runner/work/_temp/Library/00LOCK-bitops/00new/bitops/libs 2021-05-17T16:51:21.4206015Z ** R 2021-05-17T16:51:21.4232079Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:51:21.6495959Z ** help 2021-05-17T16:51:21.6772666Z *** installing help indices 2021-05-17T16:51:21.6958904Z ** building package indices 2021-05-17T16:51:21.8948196Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:51:22.0653860Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:51:22.0838625Z ** testing if installed package can be loaded from final location 2021-05-17T16:51:22.2565606Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:51:22.2570297Z * DONE (bitops) 2021-05-17T16:51:22.7269168Z * installing *source* package ‘matrixStats’ ... 2021-05-17T16:51:22.7360222Z ** package ‘matrixStats’ successfully unpacked and MD5 sums checked 2021-05-17T16:51:22.7361446Z ** using staged installation 2021-05-17T16:51:22.7522421Z ** libs 2021-05-17T16:51:22.7585924Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c 000.init.c -o 000.init.o 2021-05-17T16:51:22.7998958Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c allocMatrix2.c -o allocMatrix2.o 2021-05-17T16:51:22.8798618Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c anyMissing.c -o anyMissing.o 2021-05-17T16:51:22.9797369Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c binCounts.c -o binCounts.o 2021-05-17T16:51:23.0811168Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c binMeans.c -o binMeans.o 2021-05-17T16:51:23.2303694Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colCounts.c -o colCounts.o 2021-05-17T16:51:24.6219138Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colOrderStats.c -o colOrderStats.o 2021-05-17T16:51:25.0004578Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colRanges.c -o colRanges.o 2021-05-17T16:51:26.9556376Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diff2.c -o diff2.o 2021-05-17T16:51:26.9565602Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c indexByRow.c -o indexByRow.o 2021-05-17T16:51:26.9567137Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c logSumExp.c -o logSumExp.o 2021-05-17T16:51:27.0500538Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mean2.c -o mean2.o 2021-05-17T16:51:27.2050077Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c productExpSumLog.c -o productExpSumLog.o 2021-05-17T16:51:27.3656073Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c psortKM.c -o psortKM.o 2021-05-17T16:51:27.4339171Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCounts.c -o rowCounts.o 2021-05-17T16:51:28.9224664Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCummaxs.c -o rowCummaxs.o 2021-05-17T16:51:30.0036288Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCummins.c -o rowCummins.o 2021-05-17T16:51:31.0443309Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCumprods.c -o rowCumprods.o 2021-05-17T16:51:31.9217159Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCumsums.c -o rowCumsums.o 2021-05-17T16:51:32.8042703Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowDiffs.c -o rowDiffs.o 2021-05-17T16:51:34.9782703Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowLogSumExp.c -o rowLogSumExp.o 2021-05-17T16:51:35.1216578Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMads.c -o rowMads.o 2021-05-17T16:51:36.1300110Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMeans2.c -o rowMeans2.o 2021-05-17T16:51:36.7074191Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMedians.c -o rowMedians.o 2021-05-17T16:51:37.6244702Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowOrderStats.c -o rowOrderStats.o 2021-05-17T16:51:38.0440758Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowRanges.c -o rowRanges.o 2021-05-17T16:51:39.6679958Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowRanksWithTies.c -o rowRanksWithTies.o 2021-05-17T16:51:52.1967999Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowSums2.c -o rowSums2.o 2021-05-17T16:51:52.7969338Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowVars.c -o rowVars.o 2021-05-17T16:51:53.4655272Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signTabulate.c -o signTabulate.o 2021-05-17T16:51:53.5864281Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sum2.c -o sum2.o 2021-05-17T16:51:53.6983629Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c validateIndices.c -o validateIndices.o 2021-05-17T16:51:53.9494074Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c weightedMean.c -o weightedMean.o 2021-05-17T16:51:54.1179302Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c weightedMedian.c -o weightedMedian.o 2021-05-17T16:51:54.5482091Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c x_OP_y.c -o x_OP_y.o 2021-05-17T16:52:50.8064275Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o matrixStats.so 000.init.o allocMatrix2.o anyMissing.o binCounts.o binMeans.o colCounts.o colOrderStats.o colRanges.o diff2.o indexByRow.o logSumExp.o mean2.o productExpSumLog.o psortKM.o rowCounts.o rowCummaxs.o rowCummins.o rowCumprods.o rowCumsums.o rowDiffs.o rowLogSumExp.o rowMads.o rowMeans2.o rowMedians.o rowOrderStats.o rowRanges.o rowRanksWithTies.o rowSums2.o rowVars.o signTabulate.o sum2.o validateIndices.o weightedMean.o weightedMedian.o x_OP_y.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:52:50.8946835Z installing to /home/runner/work/_temp/Library/00LOCK-matrixStats/00new/matrixStats/libs 2021-05-17T16:52:50.9072297Z ** R 2021-05-17T16:52:50.9307271Z ** inst 2021-05-17T16:52:50.9361131Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:52:52.4715818Z ** help 2021-05-17T16:52:52.6098217Z *** installing help indices 2021-05-17T16:52:52.6986389Z ** building package indices 2021-05-17T16:52:52.9964691Z ** installing vignettes 2021-05-17T16:52:53.0035751Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:52:53.1936542Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:52:53.2178242Z ** testing if installed package can be loaded from final location 2021-05-17T16:52:53.4246345Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:52:53.4265850Z * DONE (matrixStats) 2021-05-17T16:52:53.8340301Z * installing *source* package ‘R.oo’ ... 2021-05-17T16:52:53.8407136Z ** package ‘R.oo’ successfully unpacked and MD5 sums checked 2021-05-17T16:52:53.8408143Z ** using staged installation 2021-05-17T16:52:53.8536769Z ** R 2021-05-17T16:52:53.8855629Z ** inst 2021-05-17T16:52:53.8869999Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:52:56.6339557Z ** help 2021-05-17T16:52:57.1099670Z *** installing help indices 2021-05-17T16:52:57.4464482Z ** building package indices 2021-05-17T16:52:57.9601010Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:52:58.1937460Z ** testing if installed package can be loaded from final location 2021-05-17T16:52:58.4857672Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:52:58.4899586Z * DONE (R.oo) 2021-05-17T16:52:59.0858726Z * installing *source* package ‘R.utils’ ... 2021-05-17T16:52:59.0980275Z ** package ‘R.utils’ successfully unpacked and MD5 sums checked 2021-05-17T16:52:59.0981320Z ** using staged installation 2021-05-17T16:52:59.1136779Z ** R 2021-05-17T16:52:59.1865513Z ** inst 2021-05-17T16:52:59.1878282Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:53:05.4535119Z Warning in setGenericS3.default(name, export = exportGeneric, envir = envir, : 2021-05-17T16:53:05.4536506Z ** help 2021-05-17T16:53:05.4537683Z Renamed the preexisting function warnings to warnings.default, which was defined in environment base. 2021-05-17T16:53:06.3125380Z *** installing help indices 2021-05-17T16:53:06.8438097Z ** building package indices 2021-05-17T16:53:07.5678000Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:53:07.8282177Z ** testing if installed package can be loaded from final location 2021-05-17T16:53:08.2197018Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:53:08.2272727Z * DONE (R.utils) 2021-05-17T16:53:08.2411945Z 2021-05-17T16:53:08.2412873Z The downloaded source packages are in 2021-05-17T16:53:08.2414645Z ‘/tmp/RtmpdQmWxl/downloaded_packages’ 2021-05-17T16:53:08.9797793Z Skipping install of 'RNifti' from a github remote, the SHA1 (929106d1) has not changed since last install. 2021-05-17T16:53:08.9798946Z Use `force = TRUE` to force installation 2021-05-17T16:53:09.3985405Z Skipping install of 'oro.nifti' from a github remote, the SHA1 (bd06b05d) has not changed since last install. 2021-05-17T16:53:09.3986763Z Use `force = TRUE` to force installation 2021-05-17T16:53:09.5933130Z 2021-05-17T16:53:09.5950671Z checking for file ‘/tmp/RtmpdQmWxl/remotesd4e552f2a436/neuroconductor-neurobase-1d4b172/DESCRIPTION’ ... 2021-05-17T16:53:09.5971317Z 2021-05-17T16:53:09.5973175Z ✔ checking for file ‘/tmp/RtmpdQmWxl/remotesd4e552f2a436/neuroconductor-neurobase-1d4b172/DESCRIPTION’ 2021-05-17T16:53:09.6202413Z 2021-05-17T16:53:09.6218410Z 2021-05-17T16:53:09.6220218Z ─ preparing ‘neurobase’: 2021-05-17T16:53:09.6229797Z 2021-05-17T16:53:09.6231663Z 2021-05-17T16:53:09.6312240Z checking DESCRIPTION meta-information ... 2021-05-17T16:53:09.6338158Z 2021-05-17T16:53:09.6340202Z ✔ checking DESCRIPTION meta-information 2021-05-17T16:53:09.7227675Z 2021-05-17T16:53:09.7256036Z 2021-05-17T16:53:09.7258533Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-17T16:53:09.7267510Z 2021-05-17T16:53:09.7298515Z 2021-05-17T16:53:09.7302281Z ─ checking for empty or unneeded directories 2021-05-17T16:53:09.7310269Z 2021-05-17T16:53:09.7344517Z 2021-05-17T16:53:09.7346921Z ─ building ‘neurobase_1.30.1.tar.gz’ 2021-05-17T16:53:09.8132193Z 2021-05-17T16:53:09.8135866Z 2021-05-17T16:53:09.8137285Z 2021-05-17T16:53:09.8236049Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:53:09.8237014Z (as ‘lib’ is unspecified) 2021-05-17T16:53:10.1321738Z * installing *source* package ‘neurobase’ ... 2021-05-17T16:53:10.1323993Z ** using staged installation 2021-05-17T16:53:10.1510775Z ** R 2021-05-17T16:53:10.1731022Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:53:13.1205280Z ** help 2021-05-17T16:53:13.2912275Z *** installing help indices 2021-05-17T16:53:13.4151773Z ** building package indices 2021-05-17T16:53:13.7270123Z ** installing vignettes 2021-05-17T16:53:13.7329923Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:53:14.4216657Z ** testing if installed package can be loaded from final location 2021-05-17T16:53:15.1430894Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:53:15.1449243Z * DONE (neurobase) 2021-05-17T16:53:15.1616458Z Installing 12 packages: base64enc, R.methodsS3, R.oo, RNifti, abind, bitops, tinytex, htmltools, R.utils, matrixStats, oro.nifti, rmarkdown 2021-05-17T16:53:15.1627394Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-17T16:53:15.1628208Z (as ‘lib’ is unspecified) 2021-05-17T16:53:30.9016725Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/base64enc_0.1-3.tar.gz' 2021-05-17T16:53:31.6035802Z Content type 'application/x-tar' length 7843 bytes 2021-05-17T16:53:31.6039350Z ================================================== 2021-05-17T16:53:31.6040280Z downloaded 7843 bytes 2021-05-17T16:53:31.6041196Z 2021-05-17T16:53:31.6074594Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.methodsS3_1.8.1.tar.gz' 2021-05-17T16:53:32.1184480Z Content type 'binary/octet-stream' length 23789 bytes (23 KB) 2021-05-17T16:53:32.1190757Z ================================================== 2021-05-17T16:53:32.1191466Z downloaded 23 KB 2021-05-17T16:53:32.1192213Z 2021-05-17T16:53:32.1232901Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.oo_1.24.0.tar.gz' 2021-05-17T16:53:32.8006994Z Content type 'binary/octet-stream' length 382199 bytes (373 KB) 2021-05-17T16:53:32.8174731Z ================================================== 2021-05-17T16:53:32.8175495Z downloaded 373 KB 2021-05-17T16:53:32.8175943Z 2021-05-17T16:53:32.8205043Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/RNifti_1.3.1.tar.gz' 2021-05-17T16:53:33.4333634Z Error in download.file(url, destfile, method, mode = "wb", ...) : 2021-05-17T16:53:33.4335687Z cannot open URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/RNifti_1.3.1.tar.gz' 2021-05-17T16:53:33.4336984Z In addition: Warning message: 2021-05-17T16:53:33.4337623Z In download.file(url, destfile, method, mode = "wb", ...) : 2021-05-17T16:53:33.4339193Z cannot open URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/RNifti_1.3.1.tar.gz': HTTP status was '500 Internal Server Error' 2021-05-17T16:53:33.4341580Z Warning in download.packages(pkgs, destdir = tmpd, available = available, : 2021-05-17T16:53:33.4342891Z download of package ‘RNifti’ failed 2021-05-17T16:53:33.4344868Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/abind_1.4-5.tar.gz' 2021-05-17T16:53:34.1217493Z Content type 'application/x-tar' length 21895 bytes (21 KB) 2021-05-17T16:53:34.1220307Z ================================================== 2021-05-17T16:53:34.1220766Z downloaded 21 KB 2021-05-17T16:53:34.1221074Z 2021-05-17T16:53:34.1257475Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bitops_1.0-7.tar.gz' 2021-05-17T16:53:34.8005826Z Content type 'binary/octet-stream' length 10887 bytes (10 KB) 2021-05-17T16:53:34.8007689Z ================================================== 2021-05-17T16:53:34.8008438Z downloaded 10 KB 2021-05-17T16:53:34.8009788Z 2021-05-17T16:53:34.8039357Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tinytex_0.31.tar.gz' 2021-05-17T16:53:35.4934473Z Content type 'binary/octet-stream' length 29350 bytes (28 KB) 2021-05-17T16:53:35.4940758Z ================================================== 2021-05-17T16:53:35.4941205Z downloaded 28 KB 2021-05-17T16:53:35.4941458Z 2021-05-17T16:53:35.4974933Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/htmltools_0.5.1.1.tar.gz' 2021-05-17T16:53:36.1758232Z Content type 'binary/octet-stream' length 72110 bytes (70 KB) 2021-05-17T16:53:36.1813270Z ================================================== 2021-05-17T16:53:36.1814500Z downloaded 70 KB 2021-05-17T16:53:36.1814972Z 2021-05-17T16:53:36.1848711Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R.utils_2.10.1.tar.gz' 2021-05-17T16:53:36.8723446Z Content type 'binary/octet-stream' length 361740 bytes (353 KB) 2021-05-17T16:53:36.8897891Z ================================================== 2021-05-17T16:53:36.8898810Z downloaded 353 KB 2021-05-17T16:53:36.8899287Z 2021-05-17T16:53:36.8934112Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/matrixStats_0.58.0.tar.gz' 2021-05-17T16:53:37.5712644Z Content type 'binary/octet-stream' length 194842 bytes (190 KB) 2021-05-17T16:53:37.5831824Z ================================================== 2021-05-17T16:53:37.5832275Z downloaded 190 KB 2021-05-17T16:53:37.5832532Z 2021-05-17T16:53:37.5865163Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/oro.nifti_0.11.0.tar.gz' 2021-05-17T16:53:38.4187253Z Content type 'binary/octet-stream' length 5230493 bytes (5.0 MB) 2021-05-17T16:53:38.5179649Z ================================================== 2021-05-17T16:53:38.5180155Z downloaded 5.0 MB 2021-05-17T16:53:38.5180490Z 2021-05-17T16:53:38.5221742Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rmarkdown_2.8.tar.gz' 2021-05-17T16:53:39.1989986Z Content type 'binary/octet-stream' length 3236609 bytes (3.1 MB) 2021-05-17T16:53:39.2354493Z ================================================== 2021-05-17T16:53:39.2355445Z downloaded 3.1 MB 2021-05-17T16:53:39.2355968Z 2021-05-17T16:53:39.4454825Z * installing *source* package ‘base64enc’ ... 2021-05-17T16:53:39.4465755Z ** package ‘base64enc’ successfully unpacked and MD5 sums checked 2021-05-17T16:53:39.4493098Z ** using staged installation 2021-05-17T16:53:39.4600011Z ** libs 2021-05-17T16:53:39.4649919Z 2021-05-17T16:53:39.4651400Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-17T16:53:39.5793214Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c uriencode.c -o uriencode.o 2021-05-17T16:53:39.6571330Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-17T16:53:39.7341026Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o base64enc.so base64.o uriencode.o utf8.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:53:39.7563770Z installing to /home/runner/work/_temp/Library/00LOCK-base64enc/00new/base64enc/libs 2021-05-17T16:53:39.7572788Z ** R 2021-05-17T16:53:39.7602253Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:53:40.0242817Z ** help 2021-05-17T16:53:40.0447004Z *** installing help indices 2021-05-17T16:53:40.0614553Z ** building package indices 2021-05-17T16:53:40.2586076Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:53:40.4431533Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:53:40.4614956Z ** testing if installed package can be loaded from final location 2021-05-17T16:53:40.6452186Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:53:40.6458593Z * DONE (base64enc) 2021-05-17T16:53:40.8759067Z * installing *source* package ‘R.methodsS3’ ... 2021-05-17T16:53:40.8775363Z ** package ‘R.methodsS3’ successfully unpacked and MD5 sums checked 2021-05-17T16:53:40.8803206Z ** using staged installation 2021-05-17T16:53:40.8932873Z ** R 2021-05-17T16:53:40.9007994Z ** inst 2021-05-17T16:53:40.9016558Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:53:41.4141106Z ** help 2021-05-17T16:53:41.4586610Z *** installing help indices 2021-05-17T16:53:41.4982692Z ** building package indices 2021-05-17T16:53:41.7062724Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:53:41.8792870Z ** testing if installed package can be loaded from final location 2021-05-17T16:53:42.0654125Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:53:42.0661896Z * DONE (R.methodsS3) 2021-05-17T16:53:42.2909561Z * installing *source* package ‘abind’ ... 2021-05-17T16:53:42.2925140Z ** package ‘abind’ successfully unpacked and MD5 sums checked 2021-05-17T16:53:42.2952642Z ** using staged installation 2021-05-17T16:53:42.3061339Z ** R 2021-05-17T16:53:42.3112948Z ** inst 2021-05-17T16:53:42.3123778Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:53:42.8967617Z ** help 2021-05-17T16:53:42.9232880Z *** installing help indices 2021-05-17T16:53:42.9474229Z ** building package indices 2021-05-17T16:53:43.1471377Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:53:43.3179784Z ** testing if installed package can be loaded from final location 2021-05-17T16:53:43.4997775Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:53:43.5005343Z * DONE (abind) 2021-05-17T16:53:43.7140521Z * installing *source* package ‘bitops’ ... 2021-05-17T16:53:43.7153797Z ** package ‘bitops’ successfully unpacked and MD5 sums checked 2021-05-17T16:53:43.7184617Z ** using staged installation 2021-05-17T16:53:43.7292110Z ** libs 2021-05-17T16:53:43.7340011Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bit-ops.c -o bit-ops.o 2021-05-17T16:53:43.9415905Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cksum.c -o cksum.o 2021-05-17T16:53:44.0121583Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:53:44.0619376Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o bitops.so bit-ops.o cksum.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:53:44.0791997Z installing to /home/runner/work/_temp/Library/00LOCK-bitops/00new/bitops/libs 2021-05-17T16:53:44.0810122Z ** R 2021-05-17T16:53:44.0835570Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:53:44.3164515Z ** help 2021-05-17T16:53:44.3442204Z *** installing help indices 2021-05-17T16:53:44.3648376Z ** building package indices 2021-05-17T16:53:44.5579691Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:53:44.7433282Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:53:44.7614925Z ** testing if installed package can be loaded from final location 2021-05-17T16:53:44.9474409Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:53:44.9480133Z * DONE (bitops) 2021-05-17T16:53:45.1770240Z * installing *source* package ‘tinytex’ ... 2021-05-17T16:53:45.1782984Z ** package ‘tinytex’ successfully unpacked and MD5 sums checked 2021-05-17T16:53:45.1812250Z ** using staged installation 2021-05-17T16:53:45.2032168Z ** R 2021-05-17T16:53:45.2103071Z ** inst 2021-05-17T16:53:45.2111477Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:53:45.9054862Z ** help 2021-05-17T16:53:45.9389747Z *** installing help indices 2021-05-17T16:53:45.9681333Z ** building package indices 2021-05-17T16:53:46.1751371Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:53:46.3590679Z ** testing if installed package can be loaded from final location 2021-05-17T16:53:46.5609678Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:53:46.5617390Z * DONE (tinytex) 2021-05-17T16:53:47.0320276Z * installing *source* package ‘matrixStats’ ... 2021-05-17T16:53:47.0430241Z ** package ‘matrixStats’ successfully unpacked and MD5 sums checked 2021-05-17T16:53:47.0482586Z ** using staged installation 2021-05-17T16:53:47.0656883Z ** libs 2021-05-17T16:53:47.0721539Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c 000.init.c -o 000.init.o 2021-05-17T16:53:47.1153388Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c allocMatrix2.c -o allocMatrix2.o 2021-05-17T16:53:47.1959057Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c anyMissing.c -o anyMissing.o 2021-05-17T16:53:47.3002709Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c binCounts.c -o binCounts.o 2021-05-17T16:53:47.4009011Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c binMeans.c -o binMeans.o 2021-05-17T16:53:47.5458779Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colCounts.c -o colCounts.o 2021-05-17T16:53:48.9482017Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colOrderStats.c -o colOrderStats.o 2021-05-17T16:53:49.3246044Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colRanges.c -o colRanges.o 2021-05-17T16:53:50.8492108Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diff2.c -o diff2.o 2021-05-17T16:53:51.0597831Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c indexByRow.c -o indexByRow.o 2021-05-17T16:53:51.1239562Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c logSumExp.c -o logSumExp.o 2021-05-17T16:53:51.3283613Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mean2.c -o mean2.o 2021-05-17T16:53:51.4782304Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c productExpSumLog.c -o productExpSumLog.o 2021-05-17T16:53:51.6307942Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c psortKM.c -o psortKM.o 2021-05-17T16:53:51.7002732Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCounts.c -o rowCounts.o 2021-05-17T16:53:53.2167464Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCummaxs.c -o rowCummaxs.o 2021-05-17T16:53:54.2982673Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCummins.c -o rowCummins.o 2021-05-17T16:53:55.3657069Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCumprods.c -o rowCumprods.o 2021-05-17T16:53:56.2355012Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCumsums.c -o rowCumsums.o 2021-05-17T16:53:57.1561612Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowDiffs.c -o rowDiffs.o 2021-05-17T16:53:59.3369337Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowLogSumExp.c -o rowLogSumExp.o 2021-05-17T16:53:59.4760917Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMads.c -o rowMads.o 2021-05-17T16:54:00.4816191Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMeans2.c -o rowMeans2.o 2021-05-17T16:54:01.0637090Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMedians.c -o rowMedians.o 2021-05-17T16:54:01.9520388Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowOrderStats.c -o rowOrderStats.o 2021-05-17T16:54:02.3759315Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowRanges.c -o rowRanges.o 2021-05-17T16:54:03.9905740Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowRanksWithTies.c -o rowRanksWithTies.o 2021-05-17T16:54:16.4769615Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowSums2.c -o rowSums2.o 2021-05-17T16:54:17.0631544Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowVars.c -o rowVars.o 2021-05-17T16:54:17.7569733Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signTabulate.c -o signTabulate.o 2021-05-17T16:54:17.8851364Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sum2.c -o sum2.o 2021-05-17T16:54:18.0027038Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c validateIndices.c -o validateIndices.o 2021-05-17T16:54:18.2581467Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c weightedMean.c -o weightedMean.o 2021-05-17T16:54:18.4366421Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c weightedMedian.c -o weightedMedian.o 2021-05-17T16:54:18.8864449Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c x_OP_y.c -o x_OP_y.o 2021-05-17T16:55:16.3558460Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o matrixStats.so 000.init.o allocMatrix2.o anyMissing.o binCounts.o binMeans.o colCounts.o colOrderStats.o colRanges.o diff2.o indexByRow.o logSumExp.o mean2.o productExpSumLog.o psortKM.o rowCounts.o rowCummaxs.o rowCummins.o rowCumprods.o rowCumsums.o rowDiffs.o rowLogSumExp.o rowMads.o rowMeans2.o rowMedians.o rowOrderStats.o rowRanges.o rowRanksWithTies.o rowSums2.o rowVars.o signTabulate.o sum2.o validateIndices.o weightedMean.o weightedMedian.o x_OP_y.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:55:16.4446153Z installing to /home/runner/work/_temp/Library/00LOCK-matrixStats/00new/matrixStats/libs 2021-05-17T16:55:16.4561661Z ** R 2021-05-17T16:55:16.4790808Z ** inst 2021-05-17T16:55:16.4841202Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:55:17.9390882Z ** help 2021-05-17T16:55:18.0829170Z *** installing help indices 2021-05-17T16:55:18.1745297Z ** building package indices 2021-05-17T16:55:18.4556739Z ** installing vignettes 2021-05-17T16:55:18.4626067Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:55:18.6572898Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:55:18.6816319Z ** testing if installed package can be loaded from final location 2021-05-17T16:55:18.8727690Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:55:18.8745805Z * DONE (matrixStats) 2021-05-17T16:55:19.2906407Z * installing *source* package ‘R.oo’ ... 2021-05-17T16:55:19.2981570Z ** package ‘R.oo’ successfully unpacked and MD5 sums checked 2021-05-17T16:55:19.3013062Z ** using staged installation 2021-05-17T16:55:19.3160013Z ** R 2021-05-17T16:55:19.3508971Z ** inst 2021-05-17T16:55:19.3524399Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:55:22.1652768Z ** help 2021-05-17T16:55:22.6551976Z *** installing help indices 2021-05-17T16:55:22.9837615Z ** building package indices 2021-05-17T16:55:23.4837750Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:55:23.7097913Z ** testing if installed package can be loaded from final location 2021-05-17T16:55:24.0022101Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:55:24.0069490Z * DONE (R.oo) 2021-05-17T16:55:24.2741500Z * installing *source* package ‘htmltools’ ... 2021-05-17T16:55:24.2763210Z ** package ‘htmltools’ successfully unpacked and MD5 sums checked 2021-05-17T16:55:24.2802621Z ** using staged installation 2021-05-17T16:55:24.2964353Z ** libs 2021-05-17T16:55:24.3010731Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T16:55:24.3484160Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c template.c -o template.o 2021-05-17T16:55:24.4555560Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o htmltools.so init.o template.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T16:55:24.4763990Z installing to /home/runner/work/_temp/Library/00LOCK-htmltools/00new/htmltools/libs 2021-05-17T16:55:24.4771074Z ** R 2021-05-17T16:55:24.4897710Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:55:26.0060163Z ** help 2021-05-17T16:55:26.0949864Z *** installing help indices 2021-05-17T16:55:26.1540391Z ** building package indices 2021-05-17T16:55:26.4078558Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:55:26.6108134Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T16:55:26.6288364Z ** testing if installed package can be loaded from final location 2021-05-17T16:55:26.8605623Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:55:26.8621698Z * DONE (htmltools) 2021-05-17T16:55:27.4627088Z * installing *source* package ‘oro.nifti’ ... 2021-05-17T16:55:27.4811428Z ** package ‘oro.nifti’ successfully unpacked and MD5 sums checked 2021-05-17T16:55:27.4842478Z ** using staged installation 2021-05-17T16:55:27.5070511Z ** R 2021-05-17T16:55:27.5583792Z ** demo 2021-05-17T16:55:27.5594879Z ** inst 2021-05-17T16:55:27.5685346Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:55:35.4590713Z Creating a new generic function for ‘origin’ in package ‘oro.nifti’ 2021-05-17T16:55:35.4591912Z ** help 2021-05-17T16:55:35.8300518Z *** installing help indices 2021-05-17T16:55:36.0965066Z ** building package indices 2021-05-17T16:55:36.5279917Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:55:37.1195615Z ** testing if installed package can be loaded from final location 2021-05-17T16:55:37.8603754Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:55:37.8691210Z * DONE (oro.nifti) 2021-05-17T16:55:38.4668237Z * installing *source* package ‘R.utils’ ... 2021-05-17T16:55:38.4796363Z ** package ‘R.utils’ successfully unpacked and MD5 sums checked 2021-05-17T16:55:38.4824836Z ** using staged installation 2021-05-17T16:55:38.4978672Z ** R 2021-05-17T16:55:38.5763845Z ** inst 2021-05-17T16:55:38.5780000Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:55:45.0577705Z Warning in setGenericS3.default(name, export = exportGeneric, envir = envir, : 2021-05-17T16:55:45.0579108Z ** help 2021-05-17T16:55:45.0580531Z Renamed the preexisting function warnings to warnings.default, which was defined in environment base. 2021-05-17T16:55:45.9475556Z *** installing help indices 2021-05-17T16:55:46.4739911Z ** building package indices 2021-05-17T16:55:47.2413288Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:55:47.5019809Z ** testing if installed package can be loaded from final location 2021-05-17T16:55:47.9097097Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:55:47.9177475Z * DONE (R.utils) 2021-05-17T16:55:48.8054942Z * installing *source* package ‘rmarkdown’ ... 2021-05-17T16:55:48.8324117Z ** package ‘rmarkdown’ successfully unpacked and MD5 sums checked 2021-05-17T16:55:48.8350602Z ** using staged installation 2021-05-17T16:55:48.8660864Z ** R 2021-05-17T16:55:48.9042306Z ** inst 2021-05-17T16:55:48.9270621Z ** byte-compile and prepare package for lazy loading 2021-05-17T16:55:52.3115146Z ** help 2021-05-17T16:55:52.5054655Z *** installing help indices 2021-05-17T16:55:52.6556888Z *** copying figures 2021-05-17T16:55:52.6558744Z ** building package indices 2021-05-17T16:55:52.9656560Z ** installing vignettes 2021-05-17T16:55:52.9731282Z ** testing if installed package can be loaded from temporary location 2021-05-17T16:55:53.2121598Z ** testing if installed package can be loaded from final location 2021-05-17T16:55:53.5270309Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T16:55:53.5325996Z * DONE (rmarkdown) 2021-05-17T16:55:53.5547078Z 2021-05-17T16:55:53.5548043Z The downloaded source packages are in 2021-05-17T16:55:53.5549252Z ‘/tmp/RtmpdQmWxl/downloaded_packages’ 2021-05-17T16:55:53.7205329Z Skipping install of 'neurobase' from a github remote, the SHA1 (1d4b1729) has not changed since last install. 2021-05-17T16:55:53.7206560Z Use `force = TRUE` to force installation 2021-05-17T16:56:08.0940440Z Skipping install of 'rcmdcheck' from a cran remote, the SHA1 (1.3.3) has not changed since last install. 2021-05-17T16:56:08.0941256Z Use `force = TRUE` to force installation 2021-05-17T16:56:08.0952535Z Skipping install of 'markdown' from a cran remote, the SHA1 (1.1) has not changed since last install. 2021-05-17T16:56:08.0953616Z Use `force = TRUE` to force installation 2021-05-17T16:56:08.1068030Z ##[group]Run options(width = 100) 2021-05-17T16:56:08.1068547Z options(width = 100) 2021-05-17T16:56:08.1069049Z pkgs <- installed.packages()[, "Package"] 2021-05-17T16:56:08.1069834Z sessioninfo::session_info(pkgs, include_base = TRUE) 2021-05-17T16:56:08.1076653Z shell: /usr/local/bin/Rscript {0} 2021-05-17T16:56:08.1077197Z env: 2021-05-17T16:56:08.1077559Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:56:08.1077961Z TIC_DEPLOY_KEY: 2021-05-17T16:56:08.1078641Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:56:08.1080375Z GITHUB_PAT: *** 2021-05-17T16:56:08.1081192Z COVERALLS_TOKEN: *** 2021-05-17T16:56:08.1081648Z continue-on-error: true 2021-05-17T16:56:08.1082458Z VDIFFR_RUN_TESTS: 2021-05-17T16:56:08.1083049Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:56:08.1083414Z TZ: UTC 2021-05-17T16:56:08.1083747Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:56:08.1084130Z NOT_CRAN: true 2021-05-17T16:56:08.1084458Z ##[endgroup] 2021-05-17T16:56:08.5615743Z ─ Session info ─────────────────────────────────────────────────────────────────────────────────── 2021-05-17T16:56:08.5616672Z setting value 2021-05-17T16:56:08.5617457Z version R Under development (unstable) (2021-05-16 r80304) 2021-05-17T16:56:08.5618201Z os Ubuntu 20.04.2 LTS 2021-05-17T16:56:08.5618879Z system x86_64, linux-gnu 2021-05-17T16:56:08.5619394Z ui X11 2021-05-17T16:56:08.5620015Z language (EN) 2021-05-17T16:56:08.5620996Z collate C.UTF-8 2021-05-17T16:56:08.5621784Z ctype C.UTF-8 2021-05-17T16:56:08.5622251Z tz UTC 2021-05-17T16:56:08.5622856Z date 2021-05-17 2021-05-17T16:56:08.5623102Z 2021-05-17T16:56:08.5623988Z ─ Packages ─────────────────────────────────────────────────────────────────────────────────────── 2021-05-17T16:56:08.5624621Z package * version date lib source 2021-05-17T16:56:08.5625382Z abind 1.4-5 2016-07-21 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5626365Z aghast 0.2.1 2021-05-17 [1] Github (muschellij2/aghast@0c3b853) 2021-05-17T16:56:08.5627193Z askpass 1.1 2019-01-13 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5628103Z base * 4.2.0 2021-05-17 [2] local 2021-05-17T16:56:08.5628896Z base64enc 0.1-3 2015-07-28 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5629833Z bitops 1.0-7 2021-04-24 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[1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5709502Z remotes 2.3.0 2021-04-01 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5710448Z rex 1.2.0 2020-04-21 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5711320Z rlang 0.4.11 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5712202Z rmarkdown 2.8 2021-05-07 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5713157Z RNifti 1.3.1 2021-05-17 [1] Github (neuroconductor/RNifti@929106d) 2021-05-17T16:56:08.5713963Z roxygen2 7.1.1 2020-06-27 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5714675Z rpart 4.1-15 2019-04-12 [2] CRAN (R 4.2.0) 2021-05-17T16:56:08.5715415Z rprojroot 2.0.2 2020-11-15 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5716330Z rstudioapi 0.13 2020-11-12 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5717229Z rticles 0.19 2021-03-04 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5718143Z rversions 2.0.2 2020-05-25 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5718922Z sessioninfo 1.1.1 2018-11-05 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5719673Z spatial 7.3-14 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-17T16:56:08.5720575Z splines 4.2.0 2021-05-17 [2] local 2021-05-17T16:56:08.5723647Z stats * 4.2.0 2021-05-17 [2] local 2021-05-17T16:56:08.5724529Z stats4 4.2.0 2021-05-17 [2] local 2021-05-17T16:56:08.5725416Z stringi 1.6.2 2021-05-17 [1] CRAN (R 4.2.0) 2021-05-17T16:56:08.5726144Z stringr 1.4.0 2019-02-10 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5726866Z survival 3.2-11 2021-04-26 [2] CRAN (R 4.2.0) 2021-05-17T16:56:08.5727810Z sys 3.4 2020-07-23 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5728746Z sysreqs 1.0.0.9000 2021-05-17 [1] Github (r-hub/sysreqs@f068afa) 2021-05-17T16:56:08.5729675Z tcltk 4.2.0 2021-05-17 [2] local 2021-05-17T16:56:08.5730422Z testthat 3.0.2 2021-02-14 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5731177Z tibble 3.1.2 2021-05-16 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5732084Z tic 0.10.0 2021-05-17 [1] Github (ropensci/tic@3b4dfb8) 2021-05-17T16:56:08.5733001Z tidyr 1.1.3 2021-03-03 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5733698Z tidyselect 1.1.1 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5734428Z tinytex 0.31 2021-03-30 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5735301Z tools 4.2.0 2021-05-17 [2] local 2021-05-17T16:56:08.5736007Z usethis 2.0.1 2021-02-10 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5736725Z utf8 1.2.1 2021-03-12 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5737432Z utils * 4.2.0 2021-05-17 [2] local 2021-05-17T16:56:08.5738126Z vctrs 0.3.8 2021-04-29 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5738997Z waldo 0.2.5 2021-03-08 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5739899Z whisker 0.4 2019-08-28 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5740786Z withr 2.4.2 2021-04-18 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5741516Z xfun 0.23 2021-05-15 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5742325Z xml2 1.3.2 2020-04-23 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5743225Z xopen 1.0.0 2018-09-17 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5744108Z yaml 2.2.1 2020-02-01 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5744792Z zip 2.1.1 2020-08-27 [1] RSPM (R 4.2.0) 2021-05-17T16:56:08.5745043Z 2021-05-17T16:56:08.5745443Z [1] /home/runner/work/_temp/Library 2021-05-17T16:56:08.5745906Z [2] /opt/R/devel/lib/R/library 2021-05-17T16:56:08.5778342Z ##[group]Run Rscript -e 'tic::script()' 2021-05-17T16:56:08.5778855Z Rscript -e 'tic::script()' 2021-05-17T16:56:08.5779247Z ls -l check 2021-05-17T16:56:08.5823332Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-05-17T16:56:08.5823787Z env: 2021-05-17T16:56:08.5824172Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:56:08.5824762Z TIC_DEPLOY_KEY: 2021-05-17T16:56:08.5825467Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:56:08.5827226Z GITHUB_PAT: *** 2021-05-17T16:56:08.5828053Z COVERALLS_TOKEN: *** 2021-05-17T16:56:08.5828699Z continue-on-error: true 2021-05-17T16:56:08.5829136Z VDIFFR_RUN_TESTS: 2021-05-17T16:56:08.5829742Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:56:08.5830157Z TZ: UTC 2021-05-17T16:56:08.5830497Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:56:08.5830880Z NOT_CRAN: true 2021-05-17T16:56:08.5831211Z ##[endgroup] 2021-05-17T16:56:08.8537627Z ✔ Loading tic stage configuration from tic.R 2021-05-17T16:56:08.9878140Z Running script: step_rcmdcheck(warnings_are_errors = NULL, notes_are_errors = NULL, 2021-05-17T16:56:08.9879293Z args = args, build_args = NULL, error_on = error_on, repos = repo_default(), 2021-05-17T16:56:08.9879892Z timeout = Inf, check_dir = "check") 2021-05-17T16:56:09.0511456Z ── R CMD build ───────────────────────────────────────────────────────────────── 2021-05-17T16:56:09.2541999Z * checking for file ‘.../DESCRIPTION’ ... OK 2021-05-17T16:56:09.3355225Z * preparing ‘penn115’: 2021-05-17T16:56:09.3474625Z * checking DESCRIPTION meta-information ... OK 2021-05-17T16:56:09.4375161Z * installing the package to build vignettes 2021-05-17T16:56:18.8405874Z * creating vignettes ... OK 2021-05-17T16:56:18.8811177Z * checking for LF line-endings in source and make files and shell scripts 2021-05-17T16:56:18.8857950Z * checking for empty or unneeded directories 2021-05-17T16:56:18.8874741Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-17T16:56:18.8945079Z * building ‘penn115_0.1.1.tar.gz’ 2021-05-17T16:56:21.4995339Z 2021-05-17T16:56:22.1621746Z ── R CMD check ───────────────────────────────────────────────────────────────── 2021-05-17T16:56:22.3919063Z * using log directory ‘/home/runner/work/penn115/penn115/check/penn115.Rcheck’ 2021-05-17T16:56:22.3921255Z * using R Under development (unstable) (2021-05-16 r80304) 2021-05-17T16:56:22.3922761Z * using platform: x86_64-pc-linux-gnu (64-bit) 2021-05-17T16:56:22.3923720Z * using session charset: UTF-8 2021-05-17T16:56:23.7649597Z * using option ‘--as-cran’ 2021-05-17T16:56:23.7673074Z * checking for file ‘penn115/DESCRIPTION’ ... OK 2021-05-17T16:56:23.7674557Z * checking extension type ... Package 2021-05-17T16:56:23.7684464Z * this is package ‘penn115’ version ‘0.1.1’ 2021-05-17T16:56:23.7685555Z * package encoding: UTF-8 2021-05-17T16:56:23.7709330Z * checking package namespace information ... OK 2021-05-17T16:56:40.5523190Z * checking package dependencies ... OK 2021-05-17T16:56:40.5533478Z * checking if this is a source package ... OK 2021-05-17T16:56:40.5534892Z * checking if there is a namespace ... OK 2021-05-17T16:56:40.7083066Z * checking for executable files ... OK 2021-05-17T16:56:40.7084191Z * checking for hidden files and directories ... OK 2021-05-17T16:56:40.7084934Z * checking for portable file names ... OK 2021-05-17T16:56:40.7090727Z * checking for sufficient/correct file permissions ... OK 2021-05-17T16:56:40.7110525Z * checking serialization versions ... OK 2021-05-17T16:56:45.8459468Z * checking whether package ‘penn115’ can be installed ... OK 2021-05-17T16:56:45.8592004Z * checking installed package size ... NOTE 2021-05-17T16:56:45.8593033Z installed size is 34.5Mb 2021-05-17T16:56:45.8602917Z sub-directories of 1Mb or more: 2021-05-17T16:56:45.8611477Z extdata 34.3Mb 2021-05-17T16:56:45.9424335Z * checking package directory ... OK 2021-05-17T16:56:45.9432933Z * checking for future file timestamps ... OK 2021-05-17T16:56:45.9435371Z * checking ‘build’ directory ... OK 2021-05-17T16:56:46.0960490Z * checking DESCRIPTION meta-information ... OK 2021-05-17T16:56:46.0963128Z * checking top-level files ... OK 2021-05-17T16:56:46.0965493Z * checking for left-over files ... OK 2021-05-17T16:56:46.2604814Z * checking index information ... OK 2021-05-17T16:56:46.4913706Z * checking package subdirectories ... OK 2021-05-17T16:56:46.5313864Z * checking R files for non-ASCII characters ... OK 2021-05-17T16:56:46.5739446Z * checking R files for syntax errors ... OK 2021-05-17T16:56:47.2555123Z * checking whether the package can be loaded ... OK 2021-05-17T16:56:47.9506244Z * checking whether the package can be loaded with stated dependencies ... OK 2021-05-17T16:56:48.6593895Z * checking whether the package can be unloaded cleanly ... OK 2021-05-17T16:56:49.3281178Z * checking whether the namespace can be loaded with stated dependencies ... OK 2021-05-17T16:56:49.9871579Z * checking whether the namespace can be unloaded cleanly ... OK 2021-05-17T16:56:50.6963711Z * checking loading without being on the library search path ... OK 2021-05-17T16:56:51.4148398Z * checking dependencies in R code ... OK 2021-05-17T16:56:52.4808177Z * checking S3 generic/method consistency ... OK 2021-05-17T16:56:53.1810414Z * checking replacement functions ... OK 2021-05-17T16:56:53.8521726Z * checking foreign function calls ... OK 2021-05-17T16:56:57.6602644Z * checking R code for possible problems ... OK 2021-05-17T16:56:57.8408259Z * checking Rd files ... OK 2021-05-17T16:56:57.8873645Z * checking Rd metadata ... OK 2021-05-17T16:56:57.9402861Z * checking Rd line widths ... OK 2021-05-17T16:56:58.0295142Z * checking Rd cross-references ... OK 2021-05-17T16:56:58.7181081Z * checking for missing documentation entries ... OK 2021-05-17T16:57:00.7595335Z * checking for code/documentation mismatches ... OK 2021-05-17T16:57:01.9437518Z * checking Rd \usage sections ... OK 2021-05-17T16:57:02.0071256Z * checking Rd contents ... OK 2021-05-17T16:57:02.0923154Z * checking for unstated dependencies in examples ... OK 2021-05-17T16:57:02.1000068Z * checking installed files from ‘inst/doc’ ... OK 2021-05-17T16:57:02.1031301Z * checking files in ‘vignettes’ ... OK 2021-05-17T16:57:04.9091228Z * checking examples ... OK 2021-05-17T16:57:04.9775385Z * checking for unstated dependencies in ‘tests’ ... OK 2021-05-17T16:57:05.1484610Z * checking tests ... 2021-05-17T16:57:07.9215607Z Running ‘testthat.R’ 2021-05-17T16:57:07.9255950Z OK 2021-05-17T16:57:08.0985848Z * checking for unstated dependencies in vignettes ... OK 2021-05-17T16:57:08.1091406Z * checking package vignettes in ‘inst/doc’ ... OK 2021-05-17T16:57:14.6983653Z * checking re-building of vignette outputs ... OK 2021-05-17T16:57:16.3005338Z * checking PDF version of manual ... OK 2021-05-17T16:57:16.3007857Z * checking for non-standard things in the check directory ... OK 2021-05-17T16:57:16.3022704Z * checking for detritus in the temp directory ... OK 2021-05-17T16:57:16.3023508Z * DONE 2021-05-17T16:57:16.3023939Z 2021-05-17T16:57:16.3024538Z Status: 1 NOTE 2021-05-17T16:57:16.3025078Z See 2021-05-17T16:57:16.3026669Z ‘/home/runner/work/penn115/penn115/check/penn115.Rcheck/00check.log’ 2021-05-17T16:57:16.3027592Z for details. 2021-05-17T16:57:16.3028043Z 2021-05-17T16:57:16.3028465Z 2021-05-17T16:57:16.3947513Z ── R CMD check results ────────────────────────────────────── penn115 0.1.1 ──── 2021-05-17T16:57:16.3965633Z Duration: 54.8s 2021-05-17T16:57:16.3966129Z 2021-05-17T16:57:16.3992083Z ❯ checking installed package size ... NOTE 2021-05-17T16:57:16.3992874Z installed size is 34.5Mb 2021-05-17T16:57:16.3993745Z sub-directories of 1Mb or more: 2021-05-17T16:57:16.3994588Z extdata 34.3Mb 2021-05-17T16:57:16.3995004Z 2021-05-17T16:57:16.4005890Z 0 errors ✔ | 0 warnings ✔ | 1 note ✖ 2021-05-17T16:57:16.4101007Z total 70068 2021-05-17T16:57:16.4102336Z drwxr-xr-x 6 runner docker 4096 May 17 16:57 penn115.Rcheck 2021-05-17T16:57:16.4104362Z -rw-r--r-- 1 runner docker 35866253 May 17 16:56 penn115_0.1.1.tar.gz 2021-05-17T16:57:16.4106325Z -rw-r--r-- 1 runner docker 35876560 May 17 16:56 penn115_0.1.1_R_x86_64-pc-linux-gnu.tar.gz 2021-05-17T16:57:16.4142137Z ##[group]Run find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-05-17T16:57:16.4142924Z find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-05-17T16:57:16.4185823Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-05-17T16:57:16.4186305Z env: 2021-05-17T16:57:16.4186694Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:57:16.4187335Z TIC_DEPLOY_KEY: 2021-05-17T16:57:16.4188068Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:57:16.4189905Z GITHUB_PAT: *** 2021-05-17T16:57:16.4190792Z COVERALLS_TOKEN: *** 2021-05-17T16:57:16.4191204Z continue-on-error: true 2021-05-17T16:57:16.4191621Z VDIFFR_RUN_TESTS: 2021-05-17T16:57:16.4192046Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:57:16.4192423Z TZ: UTC 2021-05-17T16:57:16.4192760Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:57:16.4193112Z NOT_CRAN: true 2021-05-17T16:57:16.4193445Z ##[endgroup] 2021-05-17T16:57:16.4283284Z 2021-05-17T16:57:16.4284784Z R Under development (unstable) (2021-05-16 r80304) -- "Unsuffered Consequences" 2021-05-17T16:57:16.4286064Z Copyright (C) 2021 The R Foundation for Statistical Computing 2021-05-17T16:57:16.4287315Z Platform: x86_64-pc-linux-gnu (64-bit) 2021-05-17T16:57:16.4288071Z 2021-05-17T16:57:16.4289029Z R is free software and comes with ABSOLUTELY NO WARRANTY. 2021-05-17T16:57:16.4290202Z You are welcome to redistribute it under certain conditions. 2021-05-17T16:57:16.4291796Z Type 'license()' or 'licence()' for distribution details. 2021-05-17T16:57:16.4292232Z 2021-05-17T16:57:16.4292820Z R is a collaborative project with many contributors. 2021-05-17T16:57:16.4293715Z Type 'contributors()' for more information and 2021-05-17T16:57:16.4294602Z 'citation()' on how to cite R or R packages in publications. 2021-05-17T16:57:16.4294993Z 2021-05-17T16:57:16.4295846Z Type 'demo()' for some demos, 'help()' for on-line help, or 2021-05-17T16:57:16.4296749Z 'help.start()' for an HTML browser interface to help. 2021-05-17T16:57:16.4297643Z Type 'q()' to quit R. 2021-05-17T16:57:16.4297908Z 2021-05-17T16:57:16.4298275Z > library(testthat) 2021-05-17T16:57:16.4298881Z > library(penn115) 2021-05-17T16:57:16.4299745Z > 2021-05-17T16:57:16.4300111Z > test_check("penn115") 2021-05-17T16:57:16.4300734Z [ FAIL 0 | WARN 0 | SKIP 0 | PASS 7 ] 2021-05-17T16:57:16.4301059Z > 2021-05-17T16:57:16.4301383Z > proc.time() 2021-05-17T16:57:16.4301776Z user system elapsed 2021-05-17T16:57:16.4302163Z 2.367 0.385 2.742 2021-05-17T16:57:16.4337116Z ##[group]Run Rscript -e "tic::before_deploy()" 2021-05-17T16:57:16.4337665Z Rscript -e "tic::before_deploy()" 2021-05-17T16:57:16.4373083Z shell: /usr/bin/bash -e {0} 2021-05-17T16:57:16.4373431Z env: 2021-05-17T16:57:16.4373799Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:57:16.4374404Z TIC_DEPLOY_KEY: 2021-05-17T16:57:16.4375095Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:57:16.4376423Z GITHUB_PAT: *** 2021-05-17T16:57:16.4377144Z COVERALLS_TOKEN: *** 2021-05-17T16:57:16.4377740Z continue-on-error: true 2021-05-17T16:57:16.4378361Z VDIFFR_RUN_TESTS: 2021-05-17T16:57:16.4378809Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:57:16.4379370Z TZ: UTC 2021-05-17T16:57:16.4379716Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:57:16.4380075Z NOT_CRAN: true 2021-05-17T16:57:16.4380409Z ##[endgroup] 2021-05-17T16:57:16.7073579Z ✔ Loading tic stage configuration from tic.R 2021-05-17T16:57:16.8382211Z ##[group]Run actions/upload-release-asset@v1.0.1 2021-05-17T16:57:16.8383105Z with: 2021-05-17T16:57:16.8384050Z upload_url: https://uploads.github.com/repos/neuroconductor/penn115/releases/43073005/assets{?name,label} 2021-05-17T16:57:16.8385013Z asset_path: check/penn115_0.1.1_R_x86_64-pc-linux-gnu.tar.gz 2021-05-17T16:57:16.8385655Z asset_name: penn115_0.1.1_R_x86_64-pc-linux-gnu_R4.1.tar.gz 2021-05-17T16:57:16.8386441Z asset_content_type: application/octet-stream 2021-05-17T16:57:16.8387201Z env: 2021-05-17T16:57:16.8387579Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:57:16.8388004Z TIC_DEPLOY_KEY: 2021-05-17T16:57:16.8388692Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:57:16.8389833Z GITHUB_PAT: *** 2021-05-17T16:57:16.8390547Z COVERALLS_TOKEN: *** 2021-05-17T16:57:16.8390985Z continue-on-error: true 2021-05-17T16:57:16.8391394Z VDIFFR_RUN_TESTS: 2021-05-17T16:57:16.8391838Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:57:16.8392240Z TZ: UTC 2021-05-17T16:57:16.8392571Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:57:16.8392941Z NOT_CRAN: true 2021-05-17T16:57:16.8393625Z GITHUB_TOKEN: *** 2021-05-17T16:57:16.8393961Z ##[endgroup] 2021-05-17T16:57:19.8154496Z ##[group]Run Rscript -e "tic::deploy()" 2021-05-17T16:57:19.8155008Z Rscript -e "tic::deploy()" 2021-05-17T16:57:19.8196900Z shell: /usr/bin/bash -e {0} 2021-05-17T16:57:19.8197221Z env: 2021-05-17T16:57:19.8197607Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:57:19.8198011Z TIC_DEPLOY_KEY: 2021-05-17T16:57:19.8198667Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:57:19.8200016Z GITHUB_PAT: *** 2021-05-17T16:57:19.8200914Z COVERALLS_TOKEN: *** 2021-05-17T16:57:19.8201323Z continue-on-error: true 2021-05-17T16:57:19.8201724Z VDIFFR_RUN_TESTS: 2021-05-17T16:57:19.8202326Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:57:19.8202740Z TZ: UTC 2021-05-17T16:57:19.8203249Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:57:19.8203595Z NOT_CRAN: true 2021-05-17T16:57:19.8204105Z ##[endgroup] 2021-05-17T16:57:20.0841634Z ✔ Loading tic stage configuration from tic.R 2021-05-17T16:57:20.2072755Z ##[group]Run Rscript -e "tic::after_deploy()" 2021-05-17T16:57:20.2073524Z Rscript -e "tic::after_deploy()" 2021-05-17T16:57:20.2116430Z shell: /usr/bin/bash -e {0} 2021-05-17T16:57:20.2116773Z env: 2021-05-17T16:57:20.2117137Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T16:57:20.2117557Z TIC_DEPLOY_KEY: 2021-05-17T16:57:20.2118412Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T16:57:20.2119702Z GITHUB_PAT: *** 2021-05-17T16:57:20.2120667Z COVERALLS_TOKEN: *** 2021-05-17T16:57:20.2121140Z continue-on-error: true 2021-05-17T16:57:20.2122113Z VDIFFR_RUN_TESTS: 2021-05-17T16:57:20.2122544Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T16:57:20.2122917Z TZ: UTC 2021-05-17T16:57:20.2123255Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T16:57:20.2123618Z NOT_CRAN: true 2021-05-17T16:57:20.2123933Z ##[endgroup] 2021-05-17T16:57:20.4631114Z ✔ Loading tic stage configuration from tic.R 2021-05-17T16:57:20.7472026Z Post job cleanup. 2021-05-17T16:57:20.7911955Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-05-17T16:57:20.8000528Z Post job cleanup. 2021-05-17T16:57:20.8990924Z [command]/usr/bin/git version 2021-05-17T16:57:20.9044285Z git version 2.31.1 2021-05-17T16:57:20.9081536Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-05-17T16:57:20.9119244Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-05-17T16:57:20.9359319Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-05-17T16:57:20.9388774Z http.https://github.com/.extraheader 2021-05-17T16:57:20.9397220Z [command]/usr/bin/git config --local --unset-all http.https://github.com/.extraheader 2021-05-17T16:57:20.9432236Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-05-17T16:57:20.9696209Z Cleaning up orphan processes