2021-05-16T01:31:29.1429805Z ##[section]Starting: Request a runner to run this job 2021-05-16T01:31:29.6421591Z Can't find any online and idle self-hosted runner in current repository that matches the required labels: 'ubuntu-20.04' 2021-05-16T01:31:29.7349820Z Can't find any online and idle self-hosted runner in current repository's organization/enterprise account that matches the required labels: 'ubuntu-20.04' 2021-05-16T01:31:29.8283465Z Found online and idle hosted runner in current repository's enterprise account that matches the required labels: 'ubuntu-20.04' 2021-05-16T01:31:29.9255115Z ##[section]Finishing: Request a runner to run this job 2021-05-16T01:31:37.5515875Z Current runner version: '2.278.0' 2021-05-16T01:31:37.5547304Z ##[group]Operating System 2021-05-16T01:31:37.5548287Z Ubuntu 2021-05-16T01:31:37.5548731Z 20.04.2 2021-05-16T01:31:37.5549209Z LTS 2021-05-16T01:31:37.5549670Z ##[endgroup] 2021-05-16T01:31:37.5550321Z ##[group]Virtual Environment 2021-05-16T01:31:37.5551022Z Environment: ubuntu-20.04 2021-05-16T01:31:37.5551578Z Version: 20210510.0 2021-05-16T01:31:37.5552651Z Included Software: https://github.com/actions/virtual-environments/blob/ubuntu20/20210510.0/images/linux/Ubuntu2004-README.md 2021-05-16T01:31:37.5554241Z Image Release: https://github.com/actions/virtual-environments/releases/tag/ubuntu20%2F20210510.0 2021-05-16T01:31:37.5555198Z ##[endgroup] 2021-05-16T01:31:37.5557154Z ##[group]GITHUB_TOKEN Permissions 2021-05-16T01:31:37.5558384Z Actions: write 2021-05-16T01:31:37.5558964Z Checks: write 2021-05-16T01:31:37.5559468Z Contents: write 2021-05-16T01:31:37.5560061Z Deployments: write 2021-05-16T01:31:37.5560739Z Issues: write 2021-05-16T01:31:37.5561313Z Metadata: read 2021-05-16T01:31:37.5561902Z Packages: write 2021-05-16T01:31:37.5562451Z PullRequests: write 2021-05-16T01:31:37.5563148Z RepositoryProjects: write 2021-05-16T01:31:37.5563798Z SecurityEvents: write 2021-05-16T01:31:37.5564427Z Statuses: write 2021-05-16T01:31:37.5565017Z ##[endgroup] 2021-05-16T01:31:37.5568076Z Prepare workflow directory 2021-05-16T01:31:37.6617923Z Prepare all required actions 2021-05-16T01:31:37.6629625Z Getting action download info 2021-05-16T01:31:38.0343659Z Download action repository 'actions/checkout@v2' 2021-05-16T01:31:40.1264209Z Download action repository 'r-lib/actions@master' 2021-05-16T01:31:40.6518949Z Download action repository 'adigherman/actions@master' 2021-05-16T01:31:41.8115176Z Download action repository 'msys2/setup-msys2@v2' 2021-05-16T01:31:41.9869156Z Download action repository 'actions/cache@v1' 2021-05-16T01:31:42.1443139Z Download action repository 'actions/upload-artifact@master' 2021-05-16T01:31:42.3066019Z Download action repository 'actions/upload-release-asset@v1.0.1' 2021-05-16T01:31:42.6374108Z ##[group]Run actions/checkout@v2 2021-05-16T01:31:42.6374710Z with: 2021-05-16T01:31:42.6375186Z repository: neuroconductor/bftools 2021-05-16T01:31:42.6376195Z token: *** 2021-05-16T01:31:42.6376582Z ssh-strict: true 2021-05-16T01:31:42.6377100Z persist-credentials: true 2021-05-16T01:31:42.6377577Z clean: true 2021-05-16T01:31:42.6377977Z fetch-depth: 1 2021-05-16T01:31:42.6378371Z lfs: false 2021-05-16T01:31:42.6378750Z submodules: false 2021-05-16T01:31:42.6379131Z env: 2021-05-16T01:31:42.6379559Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:31:42.6380035Z TIC_DEPLOY_KEY: 2021-05-16T01:31:42.6380888Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:31:42.6382154Z GITHUB_PAT: *** 2021-05-16T01:31:42.6382552Z COVERALLS_TOKEN: 2021-05-16T01:31:42.6383049Z continue-on-error: true 2021-05-16T01:31:42.6383536Z VDIFFR_RUN_TESTS: 2021-05-16T01:31:42.6383920Z ##[endgroup] 2021-05-16T01:31:44.1384806Z Syncing repository: neuroconductor/bftools 2021-05-16T01:31:44.1385625Z ##[group]Getting Git version info 2021-05-16T01:31:44.1386608Z Working directory is '/home/runner/work/bftools/bftools' 2021-05-16T01:31:44.1387254Z [command]/usr/bin/git version 2021-05-16T01:31:44.1387683Z git version 2.31.1 2021-05-16T01:31:44.1389484Z ##[endgroup] 2021-05-16T01:31:44.1390264Z Deleting the contents of '/home/runner/work/bftools/bftools' 2021-05-16T01:31:44.1391679Z ##[group]Initializing the repository 2021-05-16T01:31:44.1392502Z [command]/usr/bin/git init /home/runner/work/bftools/bftools 2021-05-16T01:31:44.1393463Z hint: Using 'master' as the name for the initial branch. This default branch name 2021-05-16T01:31:44.1394422Z hint: is subject to change. To configure the initial branch name to use in all 2021-05-16T01:31:44.1395245Z hint: of your new repositories, which will suppress this warning, call: 2021-05-16T01:31:44.1395847Z hint: 2021-05-16T01:31:44.1396525Z hint: git config --global init.defaultBranch 2021-05-16T01:31:44.1397594Z hint: 2021-05-16T01:31:44.1398587Z hint: Names commonly chosen instead of 'master' are 'main', 'trunk' and 2021-05-16T01:31:44.1399806Z hint: 'development'. The just-created branch can be renamed via this command: 2021-05-16T01:31:44.1400572Z hint: 2021-05-16T01:31:44.1401199Z hint: git branch -m 2021-05-16T01:31:44.1402070Z Initialized empty Git repository in /home/runner/work/bftools/bftools/.git/ 2021-05-16T01:31:44.1403218Z [command]/usr/bin/git remote add origin https://github.com/neuroconductor/bftools 2021-05-16T01:31:44.1404147Z ##[endgroup] 2021-05-16T01:31:44.1404864Z ##[group]Disabling automatic garbage collection 2021-05-16T01:31:44.1405838Z [command]/usr/bin/git config --local gc.auto 0 2021-05-16T01:31:44.1406502Z ##[endgroup] 2021-05-16T01:31:44.1408214Z ##[group]Setting up auth 2021-05-16T01:31:44.1409310Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-05-16T01:31:44.1411080Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-05-16T01:31:44.1412938Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-05-16T01:31:44.1414991Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-05-16T01:31:44.1417082Z [command]/usr/bin/git config --local http.https://github.com/.extraheader AUTHORIZATION: basic *** 2021-05-16T01:31:44.1418065Z ##[endgroup] 2021-05-16T01:31:44.1418654Z ##[group]Fetching the repository 2021-05-16T01:31:44.1420476Z [command]/usr/bin/git -c protocol.version=2 fetch --no-tags --prune --progress --no-recurse-submodules --depth=1 origin +24951960d1700d9bbd1508f2cb2ec4872a5e82a8:refs/tags/0.2.3.3.s 2021-05-16T01:31:44.1421804Z remote: Enumerating objects: 71, done. 2021-05-16T01:31:44.1422634Z remote: Counting objects: 1% (1/71) 2021-05-16T01:31:44.1423299Z remote: Counting objects: 2% (2/71) 2021-05-16T01:31:44.1423935Z remote: Counting objects: 4% (3/71) 2021-05-16T01:31:44.1424549Z remote: Counting objects: 5% (4/71) 2021-05-16T01:31:44.1425171Z remote: Counting objects: 7% (5/71) 2021-05-16T01:31:44.1425778Z remote: Counting objects: 8% (6/71) 2021-05-16T01:31:44.1426406Z remote: Counting objects: 9% (7/71) 2021-05-16T01:31:44.1427126Z remote: Counting objects: 11% (8/71) 2021-05-16T01:31:44.1427658Z remote: Counting objects: 12% (9/71) 2021-05-16T01:31:44.1428210Z remote: Counting objects: 14% (10/71) 2021-05-16T01:31:44.1428758Z remote: Counting objects: 15% (11/71) 2021-05-16T01:31:44.1429305Z remote: Counting objects: 16% (12/71) 2021-05-16T01:31:44.1429858Z remote: Counting objects: 18% (13/71) 2021-05-16T01:31:44.1430402Z remote: Counting objects: 19% (14/71) 2021-05-16T01:31:44.1430951Z remote: Counting objects: 21% (15/71) 2021-05-16T01:31:44.1431499Z remote: Counting objects: 22% (16/71) 2021-05-16T01:31:44.1432040Z remote: Counting objects: 23% (17/71) 2021-05-16T01:31:44.1432586Z remote: Counting objects: 25% (18/71) 2021-05-16T01:31:44.1433117Z remote: Counting objects: 26% (19/71) 2021-05-16T01:31:44.1433803Z remote: Counting objects: 28% (20/71) 2021-05-16T01:31:44.1434366Z remote: Counting objects: 29% (21/71) 2021-05-16T01:31:44.1434904Z remote: Counting objects: 30% (22/71) 2021-05-16T01:31:44.1435461Z remote: Counting objects: 32% (23/71) 2021-05-16T01:31:44.1436000Z remote: Counting objects: 33% (24/71) 2021-05-16T01:31:44.1436553Z remote: Counting objects: 35% (25/71) 2021-05-16T01:31:44.1437106Z remote: Counting objects: 36% (26/71) 2021-05-16T01:31:44.1437638Z remote: Counting objects: 38% (27/71) 2021-05-16T01:31:44.1438320Z remote: Counting objects: 39% (28/71) 2021-05-16T01:31:44.1438857Z remote: Counting objects: 40% (29/71) 2021-05-16T01:31:44.1439404Z remote: Counting objects: 42% (30/71) 2021-05-16T01:31:44.1439953Z remote: Counting objects: 43% (31/71) 2021-05-16T01:31:44.1440487Z remote: Counting objects: 45% (32/71) 2021-05-16T01:31:44.1441035Z remote: Counting objects: 46% (33/71) 2021-05-16T01:31:44.1441590Z remote: Counting objects: 47% (34/71) 2021-05-16T01:31:44.1442120Z remote: Counting objects: 49% (35/71) 2021-05-16T01:31:44.1442670Z remote: Counting objects: 50% (36/71) 2021-05-16T01:31:44.1443207Z remote: Counting objects: 52% (37/71) 2021-05-16T01:31:44.1443753Z remote: Counting objects: 53% (38/71) 2021-05-16T01:31:44.1444307Z remote: Counting objects: 54% (39/71) 2021-05-16T01:31:44.1445033Z remote: Counting objects: 56% (40/71) 2021-05-16T01:31:44.1445673Z remote: Counting objects: 57% (41/71) 2021-05-16T01:31:44.1446281Z remote: Counting objects: 59% (42/71) 2021-05-16T01:31:44.1446911Z remote: Counting objects: 60% (43/71) 2021-05-16T01:31:44.1447534Z remote: Counting objects: 61% (44/71) 2021-05-16T01:31:44.1448134Z remote: Counting objects: 63% (45/71) 2021-05-16T01:31:44.1448756Z remote: Counting objects: 64% (46/71) 2021-05-16T01:31:44.1449357Z remote: Counting objects: 66% (47/71) 2021-05-16T01:31:44.1449978Z remote: Counting objects: 67% (48/71) 2021-05-16T01:31:44.1450600Z remote: Counting objects: 69% (49/71) 2021-05-16T01:31:44.1451250Z remote: Counting objects: 70% (50/71) 2021-05-16T01:31:44.1451879Z remote: Counting objects: 71% (51/71) 2021-05-16T01:31:44.1452500Z remote: Counting objects: 73% (52/71) 2021-05-16T01:31:44.1453108Z remote: Counting objects: 74% (53/71) 2021-05-16T01:31:44.1453734Z remote: Counting objects: 76% (54/71) 2021-05-16T01:31:44.1454434Z remote: Counting objects: 77% (55/71) 2021-05-16T01:31:44.1455084Z remote: Counting objects: 78% (56/71) 2021-05-16T01:31:44.1455710Z remote: Counting objects: 80% (57/71) 2021-05-16T01:31:44.1456324Z remote: Counting objects: 81% (58/71) 2021-05-16T01:31:44.1456946Z remote: Counting objects: 83% (59/71) 2021-05-16T01:31:44.1457554Z remote: Counting objects: 84% (60/71) 2021-05-16T01:31:44.1458176Z remote: Counting objects: 85% (61/71) 2021-05-16T01:31:44.1458795Z remote: Counting objects: 87% (62/71) 2021-05-16T01:31:44.1459541Z remote: Counting objects: 88% (63/71) 2021-05-16T01:31:44.1460147Z remote: Counting objects: 90% (64/71) 2021-05-16T01:31:44.1460775Z remote: Counting objects: 91% (65/71) 2021-05-16T01:31:44.1461384Z remote: Counting objects: 92% (66/71) 2021-05-16T01:31:44.1462005Z remote: Counting objects: 94% (67/71) 2021-05-16T01:31:44.1462635Z remote: Counting objects: 95% (68/71) 2021-05-16T01:31:44.1463242Z remote: Counting objects: 97% (69/71) 2021-05-16T01:31:44.1463874Z remote: Counting objects: 98% (70/71) 2021-05-16T01:31:44.1464531Z remote: Counting objects: 100% (71/71) 2021-05-16T01:31:44.1465174Z remote: Counting objects: 100% (71/71), done. 2021-05-16T01:31:44.1465851Z remote: Compressing objects: 1% (1/58) 2021-05-16T01:31:44.1466505Z remote: Compressing objects: 3% (2/58) 2021-05-16T01:31:44.1467177Z remote: Compressing objects: 5% (3/58) 2021-05-16T01:31:44.1467827Z remote: Compressing objects: 6% (4/58) 2021-05-16T01:31:44.1468497Z remote: Compressing objects: 8% (5/58) 2021-05-16T01:31:44.1469169Z remote: Compressing objects: 10% (6/58) 2021-05-16T01:31:44.1469828Z remote: Compressing objects: 12% (7/58) 2021-05-16T01:31:44.1470498Z remote: Compressing objects: 13% (8/58) 2021-05-16T01:31:44.1471258Z remote: Compressing objects: 15% (9/58) 2021-05-16T01:31:44.1471915Z remote: Compressing objects: 17% (10/58) 2021-05-16T01:31:44.1472593Z remote: Compressing objects: 18% (11/58) 2021-05-16T01:31:44.1473249Z remote: Compressing objects: 20% (12/58) 2021-05-16T01:31:44.1474106Z remote: Compressing objects: 22% (13/58) 2021-05-16T01:31:44.1474788Z remote: Compressing objects: 24% (14/58) 2021-05-16T01:31:44.1475445Z remote: Compressing objects: 25% (15/58) 2021-05-16T01:31:44.1476218Z remote: Compressing objects: 27% (16/58) 2021-05-16T01:31:44.1476796Z remote: Compressing objects: 29% (17/58) 2021-05-16T01:31:44.1477389Z remote: Compressing objects: 31% (18/58) 2021-05-16T01:31:44.1477978Z remote: Compressing objects: 32% (19/58) 2021-05-16T01:31:44.1478550Z remote: Compressing objects: 34% (20/58) 2021-05-16T01:31:44.1479137Z remote: Compressing objects: 36% (21/58) 2021-05-16T01:31:44.1479722Z remote: Compressing objects: 37% (22/58) 2021-05-16T01:31:44.1480309Z remote: Compressing objects: 39% (23/58) 2021-05-16T01:31:44.1480897Z remote: Compressing objects: 41% (24/58) 2021-05-16T01:31:44.1481476Z remote: Compressing objects: 43% (25/58) 2021-05-16T01:31:44.1482068Z remote: Compressing objects: 44% (26/58) 2021-05-16T01:31:44.1482658Z remote: Compressing objects: 46% (27/58) 2021-05-16T01:31:44.1483232Z remote: Compressing objects: 48% (28/58) 2021-05-16T01:31:44.1483826Z remote: Compressing objects: 50% (29/58) 2021-05-16T01:31:44.1484402Z remote: Compressing objects: 51% (30/58) 2021-05-16T01:31:44.1484996Z remote: Compressing objects: 53% (31/58) 2021-05-16T01:31:44.1485584Z remote: Compressing objects: 55% (32/58) 2021-05-16T01:31:44.1486158Z remote: Compressing objects: 56% (33/58) 2021-05-16T01:31:44.1486856Z remote: Compressing objects: 58% (34/58) 2021-05-16T01:31:44.1487436Z remote: Compressing objects: 60% (35/58) 2021-05-16T01:31:44.1487971Z remote: Compressing objects: 62% (36/58) 2021-05-16T01:31:44.1488490Z remote: Compressing objects: 63% (37/58) 2021-05-16T01:31:44.1488991Z remote: Compressing objects: 65% (38/58) 2021-05-16T01:31:44.1489761Z remote: Compressing objects: 67% (39/58) 2021-05-16T01:31:44.1490336Z remote: Compressing objects: 68% (40/58) 2021-05-16T01:31:44.1490928Z remote: Compressing objects: 70% (41/58) 2021-05-16T01:31:44.1491522Z remote: Compressing objects: 72% (42/58) 2021-05-16T01:31:44.1492096Z remote: Compressing objects: 74% (43/58) 2021-05-16T01:31:44.1492688Z remote: Compressing objects: 75% (44/58) 2021-05-16T01:31:44.1493281Z remote: Compressing objects: 77% (45/58) 2021-05-16T01:31:44.1493859Z remote: Compressing objects: 79% (46/58) 2021-05-16T01:31:44.1494655Z remote: Compressing objects: 81% (47/58) 2021-05-16T01:31:44.1495317Z remote: Compressing objects: 82% (48/58) 2021-05-16T01:31:44.1495993Z remote: Compressing objects: 84% (49/58) 2021-05-16T01:31:44.1496659Z remote: Compressing objects: 86% (50/58) 2021-05-16T01:31:44.1497314Z remote: Compressing objects: 87% (51/58) 2021-05-16T01:31:44.1497983Z remote: Compressing objects: 89% (52/58) 2021-05-16T01:31:44.1498633Z remote: Compressing objects: 91% (53/58) 2021-05-16T01:31:44.1499302Z remote: Compressing objects: 93% (54/58) 2021-05-16T01:31:44.1500151Z remote: Compressing objects: 94% (55/58) 2021-05-16T01:31:44.1500862Z remote: Compressing objects: 96% (56/58) 2021-05-16T01:31:44.1501581Z remote: Compressing objects: 98% (57/58) 2021-05-16T01:31:44.1502295Z remote: Compressing objects: 100% (58/58) 2021-05-16T01:31:44.1503028Z remote: Compressing objects: 100% (58/58), done. 2021-05-16T01:31:44.1504194Z remote: Total 71 (delta 10), reused 56 (delta 7), pack-reused 0 2021-05-16T01:31:44.1505272Z From https://github.com/neuroconductor/bftools 2021-05-16T01:31:44.1506494Z * [new ref] 24951960d1700d9bbd1508f2cb2ec4872a5e82a8 -> 0.2.3.3.s 2021-05-16T01:31:44.1507311Z ##[endgroup] 2021-05-16T01:31:44.1507959Z ##[group]Determining the checkout info 2021-05-16T01:31:44.1508607Z ##[endgroup] 2021-05-16T01:31:44.1509182Z ##[group]Checking out the ref 2021-05-16T01:31:44.1510184Z [command]/usr/bin/git checkout --progress --force refs/tags/0.2.3.3.s 2021-05-16T01:31:44.1511162Z Note: switching to 'refs/tags/0.2.3.3.s'. 2021-05-16T01:31:44.1511724Z 2021-05-16T01:31:44.1512580Z You are in 'detached HEAD' state. You can look around, make experimental 2021-05-16T01:31:44.1513494Z changes and commit them, and you can discard any commits you make in this 2021-05-16T01:31:44.1514493Z state without impacting any branches by switching back to a branch. 2021-05-16T01:31:44.1515055Z 2021-05-16T01:31:44.1515684Z If you want to create a new branch to retain commits you create, you may 2021-05-16T01:31:44.1516768Z do so (now or later) by using -c with the switch command. Example: 2021-05-16T01:31:44.1517286Z 2021-05-16T01:31:44.1517992Z git switch -c 2021-05-16T01:31:44.1518449Z 2021-05-16T01:31:44.1518934Z Or undo this operation with: 2021-05-16T01:31:44.1519347Z 2021-05-16T01:31:44.1519906Z git switch - 2021-05-16T01:31:44.1520272Z 2021-05-16T01:31:44.1521037Z Turn off this advice by setting config variable advice.detachedHead to false 2021-05-16T01:31:44.1521597Z 2021-05-16T01:31:44.1522030Z HEAD is now at 2495196 Version id 106 stable 2021-05-16T01:31:44.1522518Z ##[endgroup] 2021-05-16T01:31:44.1523388Z [command]/usr/bin/git log -1 --format='%H' 2021-05-16T01:31:44.1524286Z '24951960d1700d9bbd1508f2cb2ec4872a5e82a8' 2021-05-16T01:31:44.1601271Z ##[group]Run r-lib/actions/setup-r@master 2021-05-16T01:31:44.1601788Z with: 2021-05-16T01:31:44.1602202Z r-version: devel 2021-05-16T01:31:44.1602624Z Ncpus: 1 2021-05-16T01:31:44.1603075Z crayon.enabled: NULL 2021-05-16T01:31:44.1603669Z remove-openmp-macos: true 2021-05-16T01:31:44.1604286Z http-user-agent: default 2021-05-16T01:31:44.1604802Z install-r: true 2021-05-16T01:31:44.1605432Z windows-path-include-mingw: true 2021-05-16T01:31:44.1606027Z env: 2021-05-16T01:31:44.1606493Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:31:44.1607008Z TIC_DEPLOY_KEY: 2021-05-16T01:31:44.1607924Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:31:44.1609378Z GITHUB_PAT: *** 2021-05-16T01:31:44.1609823Z COVERALLS_TOKEN: 2021-05-16T01:31:44.1610346Z continue-on-error: true 2021-05-16T01:31:44.1610877Z VDIFFR_RUN_TESTS: 2021-05-16T01:31:44.1611292Z ##[endgroup] 2021-05-16T01:31:48.9300930Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive add-apt-repository -y ppa:cran/travis 2021-05-16T01:31:50.8211208Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-05-16T01:31:50.8220963Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease [114 kB] 2021-05-16T01:31:50.8226398Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease [101 kB] 2021-05-16T01:31:50.8257202Z Get:4 http://security.ubuntu.com/ubuntu focal-security InRelease [109 kB] 2021-05-16T01:31:50.8712914Z Hit:5 https://download.mono-project.com/repo/ubuntu stable-focal InRelease 2021-05-16T01:31:50.9556817Z Hit:6 http://ppa.launchpad.net/apt-fast/stable/ubuntu focal InRelease 2021-05-16T01:31:51.0592534Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 Packages [983 kB] 2021-05-16T01:31:51.0856834Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main Translation-en [222 kB] 2021-05-16T01:31:51.0895776Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 c-n-f Metadata [13.3 kB] 2021-05-16T01:31:51.0904505Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted amd64 Packages [226 kB] 2021-05-16T01:31:51.0920133Z Get:11 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease [10.5 kB] 2021-05-16T01:31:51.0998042Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted Translation-en [33.3 kB] 2021-05-16T01:31:51.1029144Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 Packages [774 kB] 2021-05-16T01:31:51.1128076Z Get:14 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease [18.0 kB] 2021-05-16T01:31:51.1140296Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe Translation-en [166 kB] 2021-05-16T01:31:51.1169201Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 c-n-f Metadata [17.4 kB] 2021-05-16T01:31:51.3601502Z Hit:17 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-05-16T01:31:51.4323240Z Get:18 http://security.ubuntu.com/ubuntu focal-security/main amd64 Packages [655 kB] 2021-05-16T01:31:51.4979466Z Get:19 http://security.ubuntu.com/ubuntu focal-security/main Translation-en [131 kB] 2021-05-16T01:31:51.5005575Z Get:20 http://security.ubuntu.com/ubuntu focal-security/main amd64 c-n-f Metadata [7508 B] 2021-05-16T01:31:51.5010592Z Get:21 http://security.ubuntu.com/ubuntu focal-security/restricted amd64 Packages [203 kB] 2021-05-16T01:31:51.5037560Z Get:22 http://security.ubuntu.com/ubuntu focal-security/restricted Translation-en [29.7 kB] 2021-05-16T01:31:51.5067494Z Get:23 http://security.ubuntu.com/ubuntu focal-security/universe amd64 Packages [565 kB] 2021-05-16T01:31:51.5182792Z Get:24 http://security.ubuntu.com/ubuntu focal-security/universe amd64 c-n-f Metadata [11.0 kB] 2021-05-16T01:31:51.7621266Z Get:25 https://packages.microsoft.com/ubuntu/20.04/prod focal/main amd64 Packages [73.2 kB] 2021-05-16T01:31:58.2387980Z Fetched 4463 kB in 1s (4012 kB/s) 2021-05-16T01:31:58.9802504Z Reading package lists... 2021-05-16T01:31:59.0060579Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get update -y -qq 2021-05-16T01:32:00.8773214Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get install -y gdebi-core qpdf devscripts 2021-05-16T01:32:00.9445098Z Reading package lists... 2021-05-16T01:32:01.0883941Z Building dependency tree... 2021-05-16T01:32:01.0897438Z Reading state information... 2021-05-16T01:32:01.2520629Z The following additional packages will be installed: 2021-05-16T01:32:01.2523348Z dctrl-tools diffstat dput gettext intltool-debian libapt-pkg-perl 2021-05-16T01:32:01.2525873Z libarchive-zip-perl libarray-intspan-perl libasync-mergepoint-perl 2021-05-16T01:32:01.2528812Z libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl 2021-05-16T01:32:01.2531847Z libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl 2021-05-16T01:32:01.2534698Z libcommon-sense-perl libconst-fast-perl libcontextual-return-perl 2021-05-16T01:32:01.2537205Z libcpanel-json-xs-perl libcroco3 libdata-optlist-perl 2021-05-16T01:32:01.2539924Z libdevel-callchecker-perl libdevel-size-perl libdigest-bubblebabble-perl 2021-05-16T01:32:01.2542883Z libdigest-hmac-perl libdistro-info-perl libdynaloader-functions-perl 2021-05-16T01:32:01.2545576Z libemail-valid-perl libexporter-tiny-perl libfile-chdir-perl 2021-05-16T01:32:01.2548078Z libfile-find-rule-perl libfile-homedir-perl libfile-which-perl 2021-05-16T01:32:01.2550732Z libfont-ttf-perl libfuture-perl libgetopt-long-descriptive-perl 2021-05-16T01:32:01.2553401Z libgit-wrapper-perl libgitlab-api-v4-perl libhash-fieldhash-perl 2021-05-16T01:32:01.2556685Z libhttp-tiny-multipart-perl libimport-into-perl libio-async-loop-epoll-perl 2021-05-16T01:32:01.2559588Z libio-async-perl libio-prompter-perl libio-pty-perl libio-string-perl 2021-05-16T01:32:01.2562067Z libipc-run-perl libjson-maybexs-perl libjson-perl libjson-xs-perl 2021-05-16T01:32:01.2564571Z liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl 2021-05-16T01:32:01.2567007Z liblist-someutils-perl liblist-someutils-xs-perl 2021-05-16T01:32:01.2569364Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-05-16T01:32:01.2571104Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-05-16T01:32:01.2572879Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-05-16T01:32:01.2574211Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-05-16T01:32:01.2575586Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-05-16T01:32:01.2577141Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-05-16T01:32:01.2578811Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-05-16T01:32:01.2580342Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-05-16T01:32:01.2581793Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-05-16T01:32:01.2583366Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-05-16T01:32:01.2584907Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-05-16T01:32:01.2586495Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-05-16T01:32:01.2588110Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-05-16T01:32:01.2589650Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-05-16T01:32:01.2591335Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-05-16T01:32:01.2592998Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-05-16T01:32:01.2594642Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-05-16T01:32:01.2596115Z libtype-tiny-perl libtype-tiny-xs-perl libtypes-serialiser-perl 2021-05-16T01:32:01.2597666Z libunicode-utf8-perl libvariable-magic-perl libwant-perl libxml-writer-perl 2021-05-16T01:32:01.2599093Z libyaml-libyaml-perl licensecheck lintian patchutils python3-gpg 2021-05-16T01:32:01.2600456Z python3-magic python3-unidiff python3-xdg t1utils wdiff 2021-05-16T01:32:01.2601350Z Suggested packages: 2021-05-16T01:32:01.2602290Z debtags adequate autopkgtest bls-standalone bsd-mailx | mailx 2021-05-16T01:32:01.2603709Z check-all-the-things cvs-buildpackage debhelper devscripts-el diffoscope 2021-05-16T01:32:01.2605146Z disorderfs dose-extra duck faketime gnuplot how-can-i-help libdbd-pg-perl 2021-05-16T01:32:01.2606562Z libnet-smtps-perl libterm-size-perl libyaml-syck-perl mozilla-devscripts 2021-05-16T01:32:01.2608012Z mutt piuparts quilt ratt reprotest svn-buildpackage w3m debian-keyring 2021-05-16T01:32:01.2609292Z equivs libsoap-lite-perl python3-paramiko mini-dinstall gettext-doc 2021-05-16T01:32:01.2610674Z autopoint libasprintf-dev libgettextpo-dev libossp-uuid-perl 2021-05-16T01:32:01.2612241Z libscalar-number-perl libbareword-filehandles-perl libindirect-perl 2021-05-16T01:32:01.2613957Z libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl 2021-05-16T01:32:01.2615515Z binutils-multiarch libtext-template-perl wdiff-doc 2021-05-16T01:32:01.7927358Z The following NEW packages will be installed: 2021-05-16T01:32:01.7931777Z dctrl-tools devscripts diffstat dput gdebi-core gettext intltool-debian 2021-05-16T01:32:01.7933308Z libapt-pkg-perl libarchive-zip-perl libarray-intspan-perl 2021-05-16T01:32:01.7936359Z libasync-mergepoint-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl 2021-05-16T01:32:01.7938394Z libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl 2021-05-16T01:32:01.7939993Z libclone-perl libcommon-sense-perl libconst-fast-perl 2021-05-16T01:32:01.7942715Z libcontextual-return-perl libcpanel-json-xs-perl libcroco3 2021-05-16T01:32:01.7944643Z libdata-optlist-perl libdevel-callchecker-perl libdevel-size-perl 2021-05-16T01:32:01.7946476Z libdigest-bubblebabble-perl libdigest-hmac-perl libdistro-info-perl 2021-05-16T01:32:01.7949630Z libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl 2021-05-16T01:32:01.7951424Z libfile-chdir-perl libfile-find-rule-perl libfile-homedir-perl 2021-05-16T01:32:01.7952974Z libfile-which-perl libfont-ttf-perl libfuture-perl 2021-05-16T01:32:01.7958022Z libgetopt-long-descriptive-perl libgit-wrapper-perl libgitlab-api-v4-perl 2021-05-16T01:32:01.7959983Z libhash-fieldhash-perl libhttp-tiny-multipart-perl libimport-into-perl 2021-05-16T01:32:01.7961703Z libio-async-loop-epoll-perl libio-async-perl libio-prompter-perl 2021-05-16T01:32:01.7969458Z libio-pty-perl libio-string-perl libipc-run-perl libjson-maybexs-perl 2021-05-16T01:32:01.7971295Z libjson-perl libjson-xs-perl liblinux-epoll-perl liblist-compare-perl 2021-05-16T01:32:01.7973354Z liblist-moreutils-perl liblist-someutils-perl liblist-someutils-xs-perl 2021-05-16T01:32:01.7975341Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-05-16T01:32:01.7977338Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-05-16T01:32:01.7979074Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-05-16T01:32:01.7980644Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-05-16T01:32:01.7982296Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-05-16T01:32:01.7984043Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-05-16T01:32:01.7985998Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-05-16T01:32:01.7988053Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-05-16T01:32:01.7989747Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-05-16T01:32:01.7991552Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-05-16T01:32:01.8076896Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-05-16T01:32:01.8078728Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-05-16T01:32:01.8080839Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-05-16T01:32:01.8082785Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-05-16T01:32:01.8084813Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-05-16T01:32:01.8086731Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-05-16T01:32:01.8088446Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-05-16T01:32:01.8090139Z libtype-tiny-perl libtype-tiny-xs-perl libtypes-serialiser-perl 2021-05-16T01:32:01.8091897Z libunicode-utf8-perl libvariable-magic-perl libwant-perl libxml-writer-perl 2021-05-16T01:32:01.8093480Z libyaml-libyaml-perl licensecheck lintian patchutils python3-gpg 2021-05-16T01:32:01.8094777Z python3-magic python3-unidiff python3-xdg qpdf t1utils wdiff 2021-05-16T01:32:01.8264023Z 0 upgraded, 130 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:32:01.8264796Z Need to get 8648 kB of archives. 2021-05-16T01:32:01.8265651Z After this operation, 32.3 MB of additional disk space will be used. 2021-05-16T01:32:01.8267864Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dctrl-tools amd64 2.24-3 [61.5 kB] 2021-05-16T01:32:01.8290319Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-which-perl all 1.23-1 [13.8 kB] 2021-05-16T01:32:01.8298989Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-homedir-perl all 1.004-1 [37.3 kB] 2021-05-16T01:32:01.8305660Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-pty-perl amd64 1:1.12-1 [32.4 kB] 2021-05-16T01:32:01.8312246Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libipc-run-perl all 20180523.0-2 [89.7 kB] 2021-05-16T01:32:01.8323123Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-method-modifiers-perl all 2.13-1 [16.2 kB] 2021-05-16T01:32:01.8332176Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-op-check-perl amd64 0.22-1build2 [10.2 kB] 2021-05-16T01:32:01.8334478Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdynaloader-functions-perl all 0.003-1 [11.9 kB] 2021-05-16T01:32:01.8347387Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-callchecker-perl amd64 0.008-1ubuntu1 [14.5 kB] 2021-05-16T01:32:01.8349855Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-classify-perl amd64 0.015-1build2 [21.1 kB] 2021-05-16T01:32:01.8351986Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-runtime-perl all 0.016-1 [16.2 kB] 2021-05-16T01:32:01.8354067Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimport-into-perl all 1.002005-1 [11.0 kB] 2021-05-16T01:32:01.8355946Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librole-tiny-perl all 2.001004-1 [16.5 kB] 2021-05-16T01:32:01.8366522Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstrictures-perl all 2.000006-1 [16.3 kB] 2021-05-16T01:32:01.8368471Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-quote-perl all 2.006006-1 [19.5 kB] 2021-05-16T01:32:01.8370361Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoo-perl all 2.003006-1 [46.3 kB] 2021-05-16T01:32:01.8372063Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 patchutils amd64 0.3.4-2 [71.1 kB] 2021-05-16T01:32:01.8422768Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 wdiff amd64 1.2.2-2build1 [29.8 kB] 2021-05-16T01:32:01.8428732Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 devscripts amd64 2.20.2ubuntu2 [940 kB] 2021-05-16T01:32:01.8517185Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 diffstat amd64 1.63-1 [27.2 kB] 2021-05-16T01:32:01.8523997Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-gpg amd64 1.13.1-7ubuntu2 [165 kB] 2021-05-16T01:32:01.8539870Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dput all 1.0.3ubuntu1 [42.3 kB] 2021-05-16T01:32:01.8547132Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdebi-core all 0.9.5.7+nmu3 [116 kB] 2021-05-16T01:32:01.8561040Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB] 2021-05-16T01:32:01.8571866Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gettext amd64 0.19.8.1-10build1 [895 kB] 2021-05-16T01:32:01.8657611Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] 2021-05-16T01:32:01.8659430Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libapt-pkg-perl amd64 0.1.36build3 [68.5 kB] 2021-05-16T01:32:01.8667055Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-zip-perl all 1.67-2 [90.5 kB] 2021-05-16T01:32:01.8677333Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarray-intspan-perl all 2.003-1 [23.3 kB] 2021-05-16T01:32:01.8688925Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasync-mergepoint-perl all 0.04-2 [10.2 kB] 2021-05-16T01:32:01.8691220Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-implementation-perl all 0.09-1 [12.2 kB] 2021-05-16T01:32:01.8694808Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [6784 B] 2021-05-16T01:32:01.8697451Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvariable-magic-perl amd64 0.62-1build2 [34.4 kB] 2021-05-16T01:32:01.8703756Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-endofscope-perl all 0.24-1 [16.8 kB] 2021-05-16T01:32:01.8709226Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcapture-tiny-perl all 0.48-1 [20.4 kB] 2021-05-16T01:32:01.8715018Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-xsaccessor-perl amd64 1.19-3build3 [33.6 kB] 2021-05-16T01:32:01.8721208Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclone-perl amd64 0.43-2 [11.0 kB] 2021-05-16T01:32:01.8725374Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcommon-sense-perl amd64 3.74-2build6 [20.1 kB] 2021-05-16T01:32:01.8731271Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-util-perl amd64 1.07-3build5 [19.7 kB] 2021-05-16T01:32:01.8737513Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-install-perl all 0.928-1 [10.5 kB] 2021-05-16T01:32:01.8741801Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdata-optlist-perl all 0.110-1 [9956 B] 2021-05-16T01:32:01.8748515Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-perl all 0.987-1 [44.9 kB] 2021-05-16T01:32:01.8760226Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libconst-fast-perl all 0.014-1 [7958 B] 2021-05-16T01:32:01.8762110Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwant-perl amd64 0.29-1build4 [24.2 kB] 2021-05-16T01:32:01.8766839Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcontextual-return-perl all 0.004014-2 [53.1 kB] 2021-05-16T01:32:01.8774567Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcpanel-json-xs-perl amd64 4.19-1build1 [109 kB] 2021-05-16T01:32:01.8788022Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-bubblebabble-perl all 0.02-2 [7908 B] 2021-05-16T01:32:01.8794711Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.3 kB] 2021-05-16T01:32:01.8802319Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdistro-info-perl all 0.23ubuntu1 [4668 B] 2021-05-16T01:32:01.8804306Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-ip-perl all 1.26-2 [27.4 kB] 2021-05-16T01:32:01.8809606Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-perl all 1.22-1 [336 kB] 2021-05-16T01:32:01.8841755Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-domain-tld-perl all 1.75-1 [29.1 kB] 2021-05-16T01:32:01.8849881Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libemail-valid-perl all 1.202-1 [16.3 kB] 2021-05-16T01:32:01.8854569Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libexporter-tiny-perl all 1.002001-1 [35.5 kB] 2021-05-16T01:32:01.8896950Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-chdir-perl all 0.1008-1 [11.7 kB] 2021-05-16T01:32:01.8898896Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-compare-perl all 0.03-1 [7318 B] 2021-05-16T01:32:01.8900777Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-glob-perl all 0.10-1 [7554 B] 2021-05-16T01:32:01.8902660Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-find-rule-perl all 0.34-1 [28.3 kB] 2021-05-16T01:32:01.8904660Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-string-perl all 1.08-3 [11.1 kB] 2021-05-16T01:32:01.8906428Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfont-ttf-perl all 1.06-1 [313 kB] 2021-05-16T01:32:01.8922018Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfuture-perl all 0.43-1 [77.8 kB] 2021-05-16T01:32:01.8923954Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-validate-perl amd64 1.29-3 [52.7 kB] 2021-05-16T01:32:01.8926326Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgetopt-long-descriptive-perl all 0.104-1 [24.6 kB] 2021-05-16T01:32:01.8960627Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-versions-perl all 1.62-1 [9294 B] 2021-05-16T01:32:01.8962531Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgit-wrapper-perl all 0.048-1 [29.9 kB] 2021-05-16T01:32:01.8964573Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhttp-tiny-multipart-perl all 0.08-1 [8488 B] 2021-05-16T01:32:01.8966526Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-prompter-perl all 0.004015-1 [58.1 kB] 2021-05-16T01:32:01.8968433Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-perl all 4.02000-2 [80.9 kB] 2021-05-16T01:32:01.8970230Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-perl all 1.708-1 [67.8 kB] 2021-05-16T01:32:01.8973952Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-adapter-screen-perl all 0.140-1 [12.1 kB] 2021-05-16T01:32:01.8979671Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-perl all 0.38-1 [19.1 kB] 2021-05-16T01:32:01.8985425Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-identify-perl amd64 0.14-1build2 [10.7 kB] 2021-05-16T01:32:01.8991350Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-name-perl amd64 0.26-1 [11.5 kB] 2021-05-16T01:32:01.8997367Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnamespace-clean-perl all 0.27-1 [13.6 kB] 2021-05-16T01:32:01.9003957Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-tiny-perl all 0.108-1 [42.6 kB] 2021-05-16T01:32:01.9010665Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-perl all 1.008001-2 [304 kB] 2021-05-16T01:32:01.9042606Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgitlab-api-v4-perl all 0.25-1 [83.8 kB] 2021-05-16T01:32:01.9053583Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhash-fieldhash-perl amd64 0.15-1build2 [16.9 kB] 2021-05-16T01:32:01.9059771Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstruct-dumb-perl all 0.09-1 [10.5 kB] 2021-05-16T01:32:01.9064841Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-perl all 0.75-1 [254 kB] 2021-05-16T01:32:01.9089646Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.0 kB] 2021-05-16T01:32:01.9095574Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-loop-epoll-perl all 0.20-1 [10.4 kB] 2021-05-16T01:32:01.9099789Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtypes-serialiser-perl all 1.0-1 [12.1 kB] 2021-05-16T01:32:01.9105357Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-xs-perl amd64 4.020-1build1 [83.7 kB] 2021-05-16T01:32:01.9115132Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-maybexs-perl all 1.004000-1 [11.0 kB] 2021-05-16T01:32:01.9121877Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-compare-perl all 0.53-1 [65.6 kB] 2021-05-16T01:32:01.9129590Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-moreutils-perl amd64 0.416-1build5 [55.5 kB] 2021-05-16T01:32:01.9138622Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-perl all 0.58-1 [29.7 kB] 2021-05-16T01:32:01.9144859Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-xs-perl amd64 0.58-2 [32.5 kB] 2021-05-16T01:32:01.9152657Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-aliases-perl all 0.001006-1 [7176 B] 2021-05-16T01:32:01.9158364Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libobject-id-perl all 0.1.2-2ubuntu1 [15.9 kB] 2021-05-16T01:32:01.9163373Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-struct-perl all 0.017-1 [23.4 kB] 2021-05-16T01:32:01.9169161Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-sec-perl amd64 1.15-1 [44.6 kB] 2021-05-16T01:32:01.9177027Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-libidn-perl amd64 0.12.ds-3build2 [17.3 kB] 2021-05-16T01:32:01.9182881Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-range-perl all 0.12-1 [8556 B] 2021-05-16T01:32:01.9188233Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-xs-perl amd64 0.29-1build1 [18.4 kB] 2021-05-16T01:32:01.9195452Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-iterator-rule-perl all 1.014-1 [49.5 kB] 2021-05-16T01:32:01.9204521Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperl4-corelibs-perl all 0.004-2 [37.4 kB] 2021-05-16T01:32:01.9211516Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperlio-gzip-perl amd64 0.19-1build5 [14.6 kB] 2021-05-16T01:32:01.9216451Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpod-constants-perl all 0.19-1 [16.0 kB] 2021-05-16T01:32:01.9235480Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqpdf26 amd64 9.1.1-1build1 [421 kB] 2021-05-16T01:32:01.9305852Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libre-engine-re2-perl amd64 0.13-5 [16.2 kB] 2021-05-16T01:32:01.9330098Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libreadonly-perl all 2.050-2 [19.9 kB] 2021-05-16T01:32:01.9348362Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-perl all 0.204-1 [15.0 kB] 2021-05-16T01:32:01.9358513Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-xs-perl amd64 0.117-1build2 [12.0 kB] 2021-05-16T01:32:01.9377270Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-license-perl all 3.2.0-1 [36.2 kB] 2021-05-16T01:32:01.9392148Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-perl all 0.2.12-1 [17.1 kB] 2021-05-16T01:32:01.9401154Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-decoder-perl amd64 4.011+ds-1build1 [102 kB] 2021-05-16T01:32:01.9443764Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-encoder-perl amd64 4.011+ds-1build1 [104 kB] 2021-05-16T01:32:01.9477640Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-perl all 4.011-1 [8604 B] 2021-05-16T01:32:01.9485355Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-key-perl amd64 1.33-2build2 [35.4 kB] 2021-05-16T01:32:01.9496133Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-copyright-perl all 0.003006-1 [9608 B] 2021-05-16T01:32:01.9503170Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-escape-perl all 2010.002-2 [17.6 kB] 2021-05-16T01:32:01.9515410Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-shellquote-perl all 1.04-1 [12.0 kB] 2021-05-16T01:32:01.9522133Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libterm-readkey-perl amd64 2.38-1build1 [24.6 kB] 2021-05-16T01:32:01.9537208Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-fatal-perl all 0.014-1 [11.1 kB] 2021-05-16T01:32:01.9545245Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-refcount-perl all 0.10-1 [11.4 kB] 2021-05-16T01:32:01.9559869Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-levenshtein-perl all 0.13-1 [9612 B] 2021-05-16T01:32:01.9572535Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-xs-perl amd64 0.016-1 [22.9 kB] 2021-05-16T01:32:01.9582764Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libunicode-utf8-perl amd64 0.62-1build1 [18.1 kB] 2021-05-16T01:32:01.9594279Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxml-writer-perl all 0.625-1 [24.9 kB] 2021-05-16T01:32:01.9604904Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [28.5 kB] 2021-05-16T01:32:01.9616649Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 licensecheck all 3.0.45-1 [23.9 kB] 2021-05-16T01:32:01.9632426Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-size-perl amd64 0.83-1build1 [20.0 kB] 2021-05-16T01:32:01.9641468Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 t1utils amd64 1.41-3 [56.1 kB] 2021-05-16T01:32:01.9658832Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 lintian all 2.62.0 [980 kB] 2021-05-16T01:32:01.9936192Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-unidiff all 0.5.5-2 [9180 B] 2021-05-16T01:32:01.9938794Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-xdg all 0.26-1ubuntu1 [36.1 kB] 2021-05-16T01:32:02.0446051Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qpdf amd64 9.1.1-1build1 [476 kB] 2021-05-16T01:32:02.0458278Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-magic all 2:0.4.15-3 [9376 B] 2021-05-16T01:32:02.7877306Z Fetched 8648 kB in 0s (43.6 MB/s) 2021-05-16T01:32:02.8262548Z Selecting previously unselected package dctrl-tools. 2021-05-16T01:32:02.8467909Z (Reading database ... 2021-05-16T01:32:02.8468603Z (Reading database ... 5% 2021-05-16T01:32:02.8469114Z (Reading database ... 10% 2021-05-16T01:32:02.8469745Z (Reading database ... 15% 2021-05-16T01:32:02.8470325Z (Reading database ... 20% 2021-05-16T01:32:02.8470825Z (Reading database ... 25% 2021-05-16T01:32:02.8471378Z (Reading database ... 30% 2021-05-16T01:32:02.8471879Z (Reading database ... 35% 2021-05-16T01:32:02.8472468Z (Reading database ... 40% 2021-05-16T01:32:02.8472999Z (Reading database ... 45% 2021-05-16T01:32:02.8473550Z (Reading database ... 50% 2021-05-16T01:32:02.8800186Z (Reading database ... 55% 2021-05-16T01:32:02.9236537Z (Reading database ... 60% 2021-05-16T01:32:02.9607544Z (Reading database ... 65% 2021-05-16T01:32:02.9988416Z (Reading database ... 70% 2021-05-16T01:32:03.0748703Z (Reading database ... 75% 2021-05-16T01:32:03.1620907Z (Reading database ... 80% 2021-05-16T01:32:03.2545764Z (Reading database ... 85% 2021-05-16T01:32:03.3234814Z (Reading database ... 90% 2021-05-16T01:32:03.3937033Z (Reading database ... 95% 2021-05-16T01:32:03.3937917Z (Reading database ... 100% 2021-05-16T01:32:03.3939206Z (Reading database ... 254809 files and directories currently installed.) 2021-05-16T01:32:03.4087546Z Preparing to unpack .../000-dctrl-tools_2.24-3_amd64.deb ... 2021-05-16T01:32:03.4219129Z Unpacking dctrl-tools (2.24-3) ... 2021-05-16T01:32:03.4556364Z Selecting previously unselected package libfile-which-perl. 2021-05-16T01:32:03.4797109Z Preparing to unpack .../001-libfile-which-perl_1.23-1_all.deb ... 2021-05-16T01:32:03.4808096Z Unpacking libfile-which-perl (1.23-1) ... 2021-05-16T01:32:03.5155788Z Selecting previously unselected package libfile-homedir-perl. 2021-05-16T01:32:03.5419250Z Preparing to unpack .../002-libfile-homedir-perl_1.004-1_all.deb 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2021-05-16T01:32:03.7671796Z Preparing to unpack .../006-libb-hooks-op-check-perl_0.22-1build2_amd64.deb ... 2021-05-16T01:32:03.7685168Z Unpacking libb-hooks-op-check-perl (0.22-1build2) ... 2021-05-16T01:32:03.7995617Z Selecting previously unselected package libdynaloader-functions-perl. 2021-05-16T01:32:03.8207062Z Preparing to unpack .../007-libdynaloader-functions-perl_0.003-1_all.deb ... 2021-05-16T01:32:03.8220329Z Unpacking libdynaloader-functions-perl (0.003-1) ... 2021-05-16T01:32:03.8515342Z Selecting previously unselected package libdevel-callchecker-perl. 2021-05-16T01:32:03.8740195Z Preparing to unpack .../008-libdevel-callchecker-perl_0.008-1ubuntu1_amd64.deb ... 2021-05-16T01:32:03.8756093Z Unpacking libdevel-callchecker-perl (0.008-1ubuntu1) ... 2021-05-16T01:32:03.9009875Z Selecting previously unselected package libparams-classify-perl. 2021-05-16T01:32:03.9262617Z Preparing to unpack .../009-libparams-classify-perl_0.015-1build2_amd64.deb ... 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Done 2021-05-16T01:32:35.0020502Z [command]/usr/bin/sudo ln -s /opt/R/devel/bin/R /usr/local/bin/R 2021-05-16T01:32:35.0147827Z [command]/usr/bin/sudo ln -s /opt/R/devel/bin/Rscript /usr/local/bin/Rscript 2021-05-16T01:32:35.0410008Z ##[group]Run r-lib/actions/setup-tinytex@master 2021-05-16T01:32:35.0410566Z env: 2021-05-16T01:32:35.0411039Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:32:35.0411551Z TIC_DEPLOY_KEY: 2021-05-16T01:32:35.0412473Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:32:35.0414449Z GITHUB_PAT: *** 2021-05-16T01:32:35.0414885Z COVERALLS_TOKEN: 2021-05-16T01:32:35.0415422Z continue-on-error: true 2021-05-16T01:32:35.0415926Z VDIFFR_RUN_TESTS: 2021-05-16T01:32:35.0416461Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:32:35.0416950Z TZ: UTC 2021-05-16T01:32:35.0417362Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:32:35.0417818Z NOT_CRAN: true 2021-05-16T01:32:35.0418332Z ##[endgroup] 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[following] 2021-05-16T01:32:36.0592276Z --2021-05-16 01:32:36-- https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu 2021-05-16T01:32:36.1080478Z Resolving ci.appveyor.com (ci.appveyor.com)... 138.91.141.243 2021-05-16T01:32:36.1721178Z Connecting to ci.appveyor.com (ci.appveyor.com)|138.91.141.243|:443... connected. 2021-05-16T01:32:36.3932344Z HTTP request sent, awaiting response... 302 Found 2021-05-16T01:32:36.3941516Z Location: https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1548/8i40h7amajmqecux/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=cnI6ZEddB1WhTbjh%2BvMOvZ4NWeKRaAn4jNMQPYkAJIg%3D&st=2021-05-16T01%3A31%3A36Z&se=2021-05-16T01%3A37%3A36Z&sp=r [following] 2021-05-16T01:32:36.3949516Z --2021-05-16 01:32:36-- https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1548/8i40h7amajmqecux/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=cnI6ZEddB1WhTbjh%2BvMOvZ4NWeKRaAn4jNMQPYkAJIg%3D&st=2021-05-16T01%3A31%3A36Z&se=2021-05-16T01%3A37%3A36Z&sp=r 2021-05-16T01:32:36.4121093Z Resolving appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)... 52.239.228.196 2021-05-16T01:32:36.4766792Z Connecting to appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)|52.239.228.196|:443... connected. 2021-05-16T01:32:36.7533585Z HTTP request sent, awaiting response... 200 OK 2021-05-16T01:32:36.7535866Z Length: 67312830 (64M) [application/octet-stream] 2021-05-16T01:32:36.7538260Z Saving to: ‘TinyTeX.tar.gz’ 2021-05-16T01:32:37.3304281Z 2021-05-16T01:32:38.9686387Z 0K ........ ........ ........ ........ 49% 15.0M 2s 2021-05-16T01:32:40.2615858Z 32768K ........ ........ ........ ........ 99% 24.4M 0s 2021-05-16T01:32:40.2621169Z 65536K 100% 2.93M=3.5s 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--no-error-if-no-engine=luajithbtex,luajittex,mfluajit --status-file=/tmp/3SBRZfS8vj/ZM9HhdaAa_. 2021-05-16T01:32:52.4731627Z OK: optex.fmt/luatex 2021-05-16T01:32:52.4732961Z tlmgr: package log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr.log 2021-05-16T01:32:52.4734564Z tlmgr: command log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr-commands.log 2021-05-16T01:32:53.7794294Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-05-16T01:32:53.7797163Z tlmgr: no updates available 2021-05-16T01:32:53.8861456Z ##[group]Run r-lib/actions/setup-pandoc@master 2021-05-16T01:32:53.8861993Z with: 2021-05-16T01:32:53.8862440Z pandoc-version: 2.7.3 2021-05-16T01:32:53.8862864Z env: 2021-05-16T01:32:53.8863352Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:32:53.8863856Z TIC_DEPLOY_KEY: 2021-05-16T01:32:53.8864802Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:32:53.8866786Z GITHUB_PAT: *** 2021-05-16T01:32:53.8867240Z COVERALLS_TOKEN: 2021-05-16T01:32:53.8867788Z continue-on-error: true 2021-05-16T01:32:53.8868299Z VDIFFR_RUN_TESTS: 2021-05-16T01:32:53.8868839Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:32:53.8869321Z TZ: UTC 2021-05-16T01:32:53.8869754Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:32:53.8870201Z NOT_CRAN: true 2021-05-16T01:32:53.8870622Z ##[endgroup] 2021-05-16T01:32:54.1680470Z [command]sudo apt-get install -y gdebi-core 2021-05-16T01:32:54.2402583Z Reading package lists... 2021-05-16T01:32:54.4012677Z Building dependency tree... 2021-05-16T01:32:54.4030125Z Reading state information... 2021-05-16T01:32:54.6381063Z gdebi-core is already the newest version (0.9.5.7+nmu3). 2021-05-16T01:32:54.6382336Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:32:54.6421873Z [command]sudo gdebi --non-interactive /home/runner/work/_temp/pandoc-2.7.3-1-amd64.deb 2021-05-16T01:32:54.7647383Z 2021-05-16T01:32:54.7821143Z 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2021-05-16T01:32:55.3096085Z 2021-05-16T01:32:55.3096671Z Reading state information... 87% 2021-05-16T01:32:55.3139710Z 2021-05-16T01:32:55.3140316Z Reading state information... 89% 2021-05-16T01:32:55.3180737Z 2021-05-16T01:32:55.3181344Z Reading state information... 91% 2021-05-16T01:32:55.3224095Z 2021-05-16T01:32:55.3224649Z Reading state information... 93% 2021-05-16T01:32:55.3267612Z 2021-05-16T01:32:55.3268225Z Reading state information... 95% 2021-05-16T01:32:55.3312837Z 2021-05-16T01:32:55.3313503Z Reading state information... 97% 2021-05-16T01:32:55.3355581Z 2021-05-16T01:32:55.3356174Z Reading state information... 99% 2021-05-16T01:32:55.6340045Z Selecting previously unselected package pandoc. 2021-05-16T01:32:55.7630141Z (Reading database ... 261973 files and directories currently installed.) 2021-05-16T01:32:55.7747565Z Preparing to unpack .../_temp/pandoc-2.7.3-1-amd64.deb ... 2021-05-16T01:32:55.7757768Z Unpacking pandoc (2.7.3-1) ... 2021-05-16T01:32:58.2386485Z Setting up pandoc (2.7.3-1) ... 2021-05-16T01:32:58.2422638Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:32:59.0386960Z 2021-05-16T01:32:59.0387737Z 2021-05-16T01:32:59.0388455Z Reading state information... Done 2021-05-16T01:32:59.0751985Z ##[group]Run git config user.name adigherman 2021-05-16T01:32:59.0752682Z git config user.name adigherman 2021-05-16T01:32:59.0753267Z git config user.email adig@jhu.edu 2021-05-16T01:32:59.0797544Z shell: /usr/bin/bash -e {0} 2021-05-16T01:32:59.0798211Z env: 2021-05-16T01:32:59.0798744Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:32:59.0799231Z TIC_DEPLOY_KEY: 2021-05-16T01:32:59.0800119Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:32:59.0801932Z GITHUB_PAT: *** 2021-05-16T01:32:59.0802366Z COVERALLS_TOKEN: 2021-05-16T01:32:59.0802881Z continue-on-error: true 2021-05-16T01:32:59.0803368Z VDIFFR_RUN_TESTS: 2021-05-16T01:32:59.0804149Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:32:59.0804643Z TZ: UTC 2021-05-16T01:32:59.0805178Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:32:59.0805601Z NOT_CRAN: true 2021-05-16T01:32:59.0806009Z ##[endgroup] 2021-05-16T01:32:59.1141375Z ##[group]Run adigherman/actions/install-sysdeps-linux@master 2021-05-16T01:32:59.1142023Z env: 2021-05-16T01:32:59.1142485Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:32:59.1142960Z TIC_DEPLOY_KEY: 2021-05-16T01:32:59.1143822Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:32:59.1145805Z GITHUB_PAT: *** 2021-05-16T01:32:59.1146228Z COVERALLS_TOKEN: 2021-05-16T01:32:59.1146718Z continue-on-error: true 2021-05-16T01:32:59.1147201Z VDIFFR_RUN_TESTS: 2021-05-16T01:32:59.1147690Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:32:59.1148146Z TZ: UTC 2021-05-16T01:32:59.1148531Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:32:59.1148954Z NOT_CRAN: true 2021-05-16T01:32:59.1149329Z ##[endgroup] 2021-05-16T01:32:59.4273337Z Reading package lists... 2021-05-16T01:32:59.5799858Z Building dependency tree... 2021-05-16T01:32:59.5818352Z Reading state information... 2021-05-16T01:32:59.7175172Z The following additional packages will be installed: 2021-05-16T01:32:59.7179402Z cmake-data libjsoncpp1 librhash0 2021-05-16T01:32:59.7185811Z Suggested packages: 2021-05-16T01:32:59.7187066Z cmake-doc ninja-build 2021-05-16T01:32:59.7639231Z The following NEW packages will be installed: 2021-05-16T01:32:59.7645112Z cmake cmake-data libjsoncpp1 librhash0 2021-05-16T01:32:59.8104169Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:32:59.8105675Z Need to get 5470 kB of archives. 2021-05-16T01:32:59.8107034Z After this operation, 28.3 MB of additional disk space will be used. 2021-05-16T01:32:59.8110342Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake-data all 3.16.3-1ubuntu1 [1612 kB] 2021-05-16T01:32:59.8407074Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjsoncpp1 amd64 1.7.4-3.1ubuntu2 [75.6 kB] 2021-05-16T01:32:59.8416313Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librhash0 amd64 1.3.9-1 [113 kB] 2021-05-16T01:32:59.8430843Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake amd64 3.16.3-1ubuntu1 [3669 kB] 2021-05-16T01:33:00.3354603Z Fetched 5470 kB in 0s (41.2 MB/s) 2021-05-16T01:33:00.3738013Z Selecting previously unselected package cmake-data. 2021-05-16T01:33:00.3803990Z (Reading database ... 2021-05-16T01:33:00.3804724Z (Reading database ... 5% 2021-05-16T01:33:00.3805421Z (Reading database ... 10% 2021-05-16T01:33:00.3806107Z (Reading database ... 15% 2021-05-16T01:33:00.3806767Z (Reading database ... 20% 2021-05-16T01:33:00.3807406Z (Reading database ... 25% 2021-05-16T01:33:00.3808060Z (Reading database ... 30% 2021-05-16T01:33:00.3808714Z (Reading database ... 35% 2021-05-16T01:33:00.3809351Z (Reading database ... 40% 2021-05-16T01:33:00.3810043Z (Reading database ... 45% 2021-05-16T01:33:00.3810600Z (Reading database ... 50% 2021-05-16T01:33:00.3839952Z (Reading database ... 55% 2021-05-16T01:33:00.3876143Z (Reading database ... 60% 2021-05-16T01:33:00.3912894Z (Reading database ... 65% 2021-05-16T01:33:00.4035618Z (Reading database ... 70% 2021-05-16T01:33:00.4146724Z (Reading database ... 75% 2021-05-16T01:33:00.4407038Z (Reading database ... 80% 2021-05-16T01:33:00.4687536Z (Reading database ... 85% 2021-05-16T01:33:00.4824023Z (Reading database ... 90% 2021-05-16T01:33:00.4902175Z (Reading database ... 95% 2021-05-16T01:33:00.4902954Z (Reading database ... 100% 2021-05-16T01:33:00.4903731Z (Reading database ... 261980 files and directories currently installed.) 2021-05-16T01:33:00.5008302Z Preparing to unpack .../cmake-data_3.16.3-1ubuntu1_all.deb ... 2021-05-16T01:33:00.5252945Z Unpacking cmake-data (3.16.3-1ubuntu1) ... 2021-05-16T01:33:01.1261347Z Selecting previously unselected package libjsoncpp1:amd64. 2021-05-16T01:33:01.1559935Z Preparing to unpack .../libjsoncpp1_1.7.4-3.1ubuntu2_amd64.deb ... 2021-05-16T01:33:01.1588983Z Unpacking libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-05-16T01:33:01.1980505Z Selecting previously unselected package librhash0:amd64. 2021-05-16T01:33:01.2269753Z Preparing to unpack .../librhash0_1.3.9-1_amd64.deb ... 2021-05-16T01:33:01.2283758Z Unpacking librhash0:amd64 (1.3.9-1) ... 2021-05-16T01:33:01.2650803Z Selecting previously unselected package cmake. 2021-05-16T01:33:01.2942219Z Preparing to unpack .../cmake_3.16.3-1ubuntu1_amd64.deb ... 2021-05-16T01:33:01.2955377Z Unpacking cmake (3.16.3-1ubuntu1) ... 2021-05-16T01:33:01.7459768Z Setting up librhash0:amd64 (1.3.9-1) ... 2021-05-16T01:33:01.7504927Z Setting up cmake-data (3.16.3-1ubuntu1) ... 2021-05-16T01:33:01.7935796Z Setting up libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-05-16T01:33:01.7975346Z Setting up cmake (3.16.3-1ubuntu1) ... 2021-05-16T01:33:01.8019821Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:33:02.9035527Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:33:04.8738736Z Reading package lists... 2021-05-16T01:33:05.0177223Z Building dependency tree... 2021-05-16T01:33:05.0195542Z Reading state information... 2021-05-16T01:33:05.1650242Z Suggested packages: 2021-05-16T01:33:05.1653719Z libssh-doc 2021-05-16T01:33:05.2067740Z The following NEW packages will be installed: 2021-05-16T01:33:05.2072070Z libssh-dev 2021-05-16T01:33:05.2281767Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:33:05.2282318Z Need to get 219 kB of archives. 2021-05-16T01:33:05.2282899Z After this operation, 1127 kB of additional disk space will be used. 2021-05-16T01:33:05.2284705Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-dev amd64 0.9.3-2ubuntu2.1 [219 kB] 2021-05-16T01:33:05.6171035Z Fetched 219 kB in 0s (10.7 MB/s) 2021-05-16T01:33:05.6465372Z Selecting previously unselected package libssh-dev:amd64. 2021-05-16T01:33:05.6532987Z (Reading database ... 2021-05-16T01:33:05.6533692Z (Reading database ... 5% 2021-05-16T01:33:05.6534303Z (Reading database ... 10% 2021-05-16T01:33:05.6534889Z (Reading database ... 15% 2021-05-16T01:33:05.6535551Z (Reading database ... 20% 2021-05-16T01:33:05.6536154Z (Reading database ... 25% 2021-05-16T01:33:05.6536769Z (Reading database ... 30% 2021-05-16T01:33:05.6537346Z (Reading database ... 35% 2021-05-16T01:33:05.6537915Z (Reading database ... 40% 2021-05-16T01:33:05.6538501Z (Reading database ... 45% 2021-05-16T01:33:05.6539085Z (Reading database ... 50% 2021-05-16T01:33:05.6570537Z (Reading database ... 55% 2021-05-16T01:33:05.6605247Z (Reading database ... 60% 2021-05-16T01:33:05.6642650Z (Reading database ... 65% 2021-05-16T01:33:05.6757033Z (Reading database ... 70% 2021-05-16T01:33:05.6867051Z (Reading database ... 75% 2021-05-16T01:33:05.7133246Z (Reading database ... 80% 2021-05-16T01:33:05.7415371Z (Reading database ... 85% 2021-05-16T01:33:05.7544990Z (Reading database ... 90% 2021-05-16T01:33:05.7617789Z (Reading database ... 95% 2021-05-16T01:33:05.7618813Z (Reading database ... 100% 2021-05-16T01:33:05.7620282Z (Reading database ... 264764 files and directories currently installed.) 2021-05-16T01:33:05.7713403Z Preparing to unpack .../libssh-dev_0.9.3-2ubuntu2.1_amd64.deb ... 2021-05-16T01:33:05.7727921Z Unpacking libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-05-16T01:33:05.8554472Z Setting up libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-05-16T01:33:07.8474659Z Reading package lists... 2021-05-16T01:33:07.9896505Z Building dependency tree... 2021-05-16T01:33:07.9916035Z Reading state information... 2021-05-16T01:33:08.1943703Z The following NEW packages will be installed: 2021-05-16T01:33:08.1948133Z jags 2021-05-16T01:33:08.2149037Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:33:08.2149868Z Need to get 1562 kB of archives. 2021-05-16T01:33:08.2151313Z After this operation, 3615 kB of additional disk space will be used. 2021-05-16T01:33:08.2153275Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 jags amd64 4.3.0-3build1 [1562 kB] 2021-05-16T01:33:08.6819233Z Fetched 1562 kB in 0s (26.2 MB/s) 2021-05-16T01:33:08.7175173Z Selecting previously unselected package jags. 2021-05-16T01:33:08.7212952Z (Reading database ... 2021-05-16T01:33:08.7213870Z (Reading database ... 5% 2021-05-16T01:33:08.7214554Z (Reading database ... 10% 2021-05-16T01:33:08.7215480Z (Reading database ... 15% 2021-05-16T01:33:08.7215914Z (Reading database ... 20% 2021-05-16T01:33:08.7216292Z (Reading database ... 25% 2021-05-16T01:33:08.7216717Z (Reading database ... 30% 2021-05-16T01:33:08.7217113Z (Reading database ... 35% 2021-05-16T01:33:08.7217494Z (Reading database ... 40% 2021-05-16T01:33:08.7217866Z (Reading database ... 45% 2021-05-16T01:33:08.7218453Z (Reading database ... 50% 2021-05-16T01:33:08.7255208Z (Reading database ... 55% 2021-05-16T01:33:08.7292695Z (Reading database ... 60% 2021-05-16T01:33:08.7329956Z (Reading database ... 65% 2021-05-16T01:33:08.7452079Z (Reading database ... 70% 2021-05-16T01:33:08.7563684Z (Reading database ... 75% 2021-05-16T01:33:08.7819777Z (Reading database ... 80% 2021-05-16T01:33:08.8130969Z (Reading database ... 85% 2021-05-16T01:33:08.8274647Z (Reading database ... 90% 2021-05-16T01:33:08.8354641Z (Reading database ... 95% 2021-05-16T01:33:08.8358812Z (Reading database ... 100% 2021-05-16T01:33:08.8360114Z (Reading database ... 264783 files and directories currently installed.) 2021-05-16T01:33:08.8469715Z Preparing to unpack .../jags_4.3.0-3build1_amd64.deb ... 2021-05-16T01:33:08.8498482Z Unpacking jags (4.3.0-3build1) ... 2021-05-16T01:33:09.0141404Z Setting up jags (4.3.0-3build1) ... 2021-05-16T01:33:09.0415648Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:33:09.7436012Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:33:11.7491143Z Reading package lists... 2021-05-16T01:33:11.8905900Z Building dependency tree... 2021-05-16T01:33:11.8923625Z Reading state information... 2021-05-16T01:33:12.0346975Z The following additional packages will be installed: 2021-05-16T01:33:12.0351716Z libnode64 libuv1-dev 2021-05-16T01:33:12.0824469Z The following NEW packages will be installed: 2021-05-16T01:33:12.0830577Z libnode-dev libnode64 libuv1-dev 2021-05-16T01:33:12.1046537Z 0 upgraded, 3 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:33:12.1047617Z Need to get 6239 kB of archives. 2021-05-16T01:33:12.1048440Z After this operation, 24.9 MB of additional disk space will be used. 2021-05-16T01:33:12.1050490Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libuv1-dev amd64 1.34.2-1ubuntu1.1 [103 kB] 2021-05-16T01:33:12.1216292Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode64 amd64 10.19.0~dfsg-3ubuntu1 [5765 kB] 2021-05-16T01:33:13.1252186Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode-dev amd64 10.19.0~dfsg-3ubuntu1 [370 kB] 2021-05-16T01:33:13.5584643Z Fetched 6239 kB in 1s (5791 kB/s) 2021-05-16T01:33:13.5911156Z Selecting previously unselected package libuv1-dev:amd64. 2021-05-16T01:33:13.5979455Z (Reading database ... 2021-05-16T01:33:13.5980115Z (Reading database ... 5% 2021-05-16T01:33:13.5980719Z (Reading database ... 10% 2021-05-16T01:33:13.5981317Z (Reading database ... 15% 2021-05-16T01:33:13.5981984Z (Reading database ... 20% 2021-05-16T01:33:13.5982587Z (Reading database ... 25% 2021-05-16T01:33:13.5983163Z (Reading database ... 30% 2021-05-16T01:33:13.5983751Z (Reading database ... 35% 2021-05-16T01:33:13.5984322Z (Reading database ... 40% 2021-05-16T01:33:13.5984914Z (Reading database ... 45% 2021-05-16T01:33:13.5985497Z (Reading database ... 50% 2021-05-16T01:33:13.6017216Z (Reading database ... 55% 2021-05-16T01:33:13.6053481Z (Reading database ... 60% 2021-05-16T01:33:13.6089794Z (Reading database ... 65% 2021-05-16T01:33:13.6212006Z (Reading database ... 70% 2021-05-16T01:33:13.6324512Z (Reading database ... 75% 2021-05-16T01:33:13.6592547Z (Reading database ... 80% 2021-05-16T01:33:13.6880819Z (Reading database ... 85% 2021-05-16T01:33:13.7010327Z (Reading database ... 90% 2021-05-16T01:33:13.7077839Z (Reading database ... 95% 2021-05-16T01:33:13.7079267Z (Reading database ... 100% 2021-05-16T01:33:13.7081025Z (Reading database ... 264923 files and directories currently installed.) 2021-05-16T01:33:13.7182745Z Preparing to unpack .../libuv1-dev_1.34.2-1ubuntu1.1_amd64.deb ... 2021-05-16T01:33:13.7200581Z Unpacking libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-05-16T01:33:13.7546456Z Selecting previously unselected package libnode64:amd64. 2021-05-16T01:33:13.7792061Z Preparing to unpack .../libnode64_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-05-16T01:33:13.7817040Z Unpacking libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-16T01:33:14.4463219Z Selecting previously unselected package libnode-dev:amd64. 2021-05-16T01:33:14.4727616Z Preparing to unpack .../libnode-dev_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-05-16T01:33:14.4739126Z Unpacking libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-16T01:33:14.5722461Z Setting up libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-05-16T01:33:14.5763680Z Setting up libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-16T01:33:14.5801784Z Setting up libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-16T01:33:14.5840813Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:33:16.5820633Z Reading package lists... 2021-05-16T01:33:16.7330191Z Building dependency tree... 2021-05-16T01:33:16.7347393Z Reading state information... 2021-05-16T01:33:16.8850364Z The following additional packages will be installed: 2021-05-16T01:33:16.8852762Z libfftw3-bin libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-05-16T01:33:16.8857788Z Suggested packages: 2021-05-16T01:33:16.8858852Z libfftw3-doc 2021-05-16T01:33:16.9293148Z The following NEW packages will be installed: 2021-05-16T01:33:16.9297447Z libfftw3-bin libfftw3-dev libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-05-16T01:33:16.9487392Z 0 upgraded, 5 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:33:16.9488236Z Need to get 3986 kB of archives. 2021-05-16T01:33:16.9489054Z After this operation, 22.4 MB of additional disk space will be used. 2021-05-16T01:33:16.9491482Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-long3 amd64 3.3.8-2ubuntu1 [313 kB] 2021-05-16T01:33:16.9722556Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-quad3 amd64 3.3.8-2ubuntu1 [673 kB] 2021-05-16T01:33:17.0270079Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-single3 amd64 3.3.8-2ubuntu1 [756 kB] 2021-05-16T01:33:17.0669031Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-bin amd64 3.3.8-2ubuntu1 [32.2 kB] 2021-05-16T01:33:17.0691015Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-dev amd64 3.3.8-2ubuntu1 [2211 kB] 2021-05-16T01:33:17.5769836Z Fetched 3986 kB in 0s (15.6 MB/s) 2021-05-16T01:33:17.6115930Z Selecting previously unselected package libfftw3-long3:amd64. 2021-05-16T01:33:17.6126150Z (Reading database ... 2021-05-16T01:33:17.6126828Z (Reading database ... 5% 2021-05-16T01:33:17.6127684Z (Reading database ... 10% 2021-05-16T01:33:17.6131585Z (Reading database ... 15% 2021-05-16T01:33:17.6132145Z (Reading database ... 20% 2021-05-16T01:33:17.6132731Z (Reading database ... 25% 2021-05-16T01:33:17.6133302Z (Reading database ... 30% 2021-05-16T01:33:17.6133827Z (Reading database ... 35% 2021-05-16T01:33:17.6134365Z (Reading database ... 40% 2021-05-16T01:33:17.6134886Z (Reading database ... 45% 2021-05-16T01:33:17.6135422Z (Reading database ... 50% 2021-05-16T01:33:17.6154645Z (Reading database ... 55% 2021-05-16T01:33:17.6184337Z (Reading database ... 60% 2021-05-16T01:33:17.6217418Z (Reading database ... 65% 2021-05-16T01:33:17.6321351Z (Reading database ... 70% 2021-05-16T01:33:17.6426692Z (Reading database ... 75% 2021-05-16T01:33:17.6678784Z (Reading database ... 80% 2021-05-16T01:33:17.6961144Z (Reading database ... 85% 2021-05-16T01:33:17.7093020Z (Reading database ... 90% 2021-05-16T01:33:17.7162937Z (Reading database ... 95% 2021-05-16T01:33:17.7163832Z (Reading database ... 100% 2021-05-16T01:33:17.7165112Z (Reading database ... 265059 files and directories currently installed.) 2021-05-16T01:33:17.7262858Z Preparing to unpack .../libfftw3-long3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-16T01:33:17.7295752Z Unpacking libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T01:33:17.7916646Z Selecting previously unselected package libfftw3-quad3:amd64. 2021-05-16T01:33:17.8123363Z Preparing to unpack .../libfftw3-quad3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-16T01:33:17.8143798Z Unpacking libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T01:33:17.9116252Z Selecting previously unselected package libfftw3-single3:amd64. 2021-05-16T01:33:17.9341229Z Preparing to unpack .../libfftw3-single3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-16T01:33:17.9355978Z Unpacking libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T01:33:18.0355239Z Selecting previously unselected package libfftw3-bin. 2021-05-16T01:33:18.0574658Z Preparing to unpack .../libfftw3-bin_3.3.8-2ubuntu1_amd64.deb ... 2021-05-16T01:33:18.0594063Z Unpacking libfftw3-bin (3.3.8-2ubuntu1) ... 2021-05-16T01:33:18.0916009Z Selecting previously unselected package libfftw3-dev:amd64. 2021-05-16T01:33:18.1158333Z Preparing to unpack .../libfftw3-dev_3.3.8-2ubuntu1_amd64.deb ... 2021-05-16T01:33:18.1176201Z Unpacking libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T01:33:18.4014445Z Setting up libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T01:33:18.4054480Z Setting up libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T01:33:18.4109908Z Setting up libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T01:33:18.4145994Z Setting up libfftw3-bin (3.3.8-2ubuntu1) ... 2021-05-16T01:33:18.4177622Z Setting up libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-05-16T01:33:18.4235910Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:33:19.2450277Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:33:21.2494376Z Reading package lists... 2021-05-16T01:33:21.3938151Z Building dependency tree... 2021-05-16T01:33:21.3957236Z Reading state information... 2021-05-16T01:33:21.5424742Z The following additional packages will be installed: 2021-05-16T01:33:21.5427900Z libdcmtk14 2021-05-16T01:33:21.5898022Z The following NEW packages will be installed: 2021-05-16T01:33:21.5906311Z dcmtk libdcmtk14 2021-05-16T01:33:21.6099649Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:33:21.6100398Z Need to get 5546 kB of archives. 2021-05-16T01:33:21.6101149Z After this operation, 26.5 MB of additional disk space will be used. 2021-05-16T01:33:21.6103112Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdcmtk14 amd64 3.6.4-2.1build2 [4682 kB] 2021-05-16T01:33:21.6990176Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 dcmtk amd64 3.6.4-2.1build2 [864 kB] 2021-05-16T01:33:22.1100859Z Fetched 5546 kB in 0s (47.5 MB/s) 2021-05-16T01:33:22.1433439Z Selecting previously unselected package libdcmtk14. 2021-05-16T01:33:22.1510095Z (Reading database ... 2021-05-16T01:33:22.1510659Z (Reading database ... 5% 2021-05-16T01:33:22.1511153Z (Reading database ... 10% 2021-05-16T01:33:22.1511654Z (Reading database ... 15% 2021-05-16T01:33:22.1512821Z (Reading database ... 20% 2021-05-16T01:33:22.1513352Z (Reading database ... 25% 2021-05-16T01:33:22.1514927Z (Reading database ... 30% 2021-05-16T01:33:22.1515441Z (Reading database ... 35% 2021-05-16T01:33:22.1515939Z (Reading database ... 40% 2021-05-16T01:33:22.1516422Z (Reading database ... 45% 2021-05-16T01:33:22.1516917Z (Reading database ... 50% 2021-05-16T01:33:22.1543100Z (Reading database ... 55% 2021-05-16T01:33:22.1580175Z (Reading database ... 60% 2021-05-16T01:33:22.1621228Z (Reading database ... 65% 2021-05-16T01:33:22.1750604Z (Reading database ... 70% 2021-05-16T01:33:22.1864828Z (Reading database ... 75% 2021-05-16T01:33:22.2132493Z (Reading database ... 80% 2021-05-16T01:33:22.2432027Z (Reading database ... 85% 2021-05-16T01:33:22.2566957Z (Reading database ... 90% 2021-05-16T01:33:22.2641102Z (Reading database ... 95% 2021-05-16T01:33:22.2642128Z (Reading database ... 100% 2021-05-16T01:33:22.2643602Z (Reading database ... 265150 files and directories currently installed.) 2021-05-16T01:33:22.2753127Z Preparing to unpack .../libdcmtk14_3.6.4-2.1build2_amd64.deb ... 2021-05-16T01:33:22.2797531Z Unpacking libdcmtk14 (3.6.4-2.1build2) ... 2021-05-16T01:33:22.7950021Z Selecting previously unselected package dcmtk. 2021-05-16T01:33:22.8226207Z Preparing to unpack .../dcmtk_3.6.4-2.1build2_amd64.deb ... 2021-05-16T01:33:22.8289609Z Unpacking dcmtk (3.6.4-2.1build2) ... 2021-05-16T01:33:22.9835331Z Setting up libdcmtk14 (3.6.4-2.1build2) ... 2021-05-16T01:33:22.9888786Z Setting up dcmtk (3.6.4-2.1build2) ... 2021-05-16T01:33:23.0062920Z Adding `dcmtk' group to system ... 2021-05-16T01:33:23.0901916Z Adding `dcmtk' user to system ... 2021-05-16T01:33:23.2695738Z adduser: Warning: The home directory `/var/lib/dcmtk/db' does not belong to the user you are currently creating. 2021-05-16T01:33:23.5213819Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:33:25.1018363Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:33:27.0654613Z Reading package lists... 2021-05-16T01:33:27.2044053Z Building dependency tree... 2021-05-16T01:33:27.2061478Z Reading state information... 2021-05-16T01:33:27.4168561Z libsecret-1-dev is already the newest version (0.20.3-0ubuntu1). 2021-05-16T01:33:27.4170109Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:33:27.4826131Z Reading package lists... 2021-05-16T01:33:27.6272540Z Building dependency tree... 2021-05-16T01:33:27.6290198Z Reading state information... 2021-05-16T01:33:27.8562381Z libpng-dev is already the newest version (1.6.37-2). 2021-05-16T01:33:27.8563939Z libpng-dev set to manually installed. 2021-05-16T01:33:27.8564983Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:33:27.9191683Z Reading package lists... 2021-05-16T01:33:28.0651175Z Building dependency tree... 2021-05-16T01:33:28.0670606Z Reading state information... 2021-05-16T01:33:28.2234792Z The following additional packages will be installed: 2021-05-16T01:33:28.2238782Z libopenjp2-7 libpoppler-cpp0v5 libpoppler-dev libpoppler97 poppler-data 2021-05-16T01:33:28.2246098Z Suggested packages: 2021-05-16T01:33:28.2247558Z poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho 2021-05-16T01:33:28.2249069Z fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai 2021-05-16T01:33:28.2250184Z fonts-arphic-uming fonts-nanum 2021-05-16T01:33:28.2682439Z The following NEW packages will be installed: 2021-05-16T01:33:28.2684579Z libopenjp2-7 libpoppler-cpp-dev libpoppler-cpp0v5 libpoppler-dev 2021-05-16T01:33:28.2685672Z libpoppler97 poppler-data 2021-05-16T01:33:28.2906586Z 0 upgraded, 6 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:33:28.2907375Z Need to get 2582 kB of archives. 2021-05-16T01:33:28.2908728Z After this operation, 16.7 MB of additional disk space will be used. 2021-05-16T01:33:28.2910585Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 poppler-data all 0.4.9-2 [1475 kB] 2021-05-16T01:33:28.3403307Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopenjp2-7 amd64 2.3.1-1ubuntu4.20.04.1 [141 kB] 2021-05-16T01:33:28.3459716Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler97 amd64 0.86.1-0ubuntu1 [915 kB] 2021-05-16T01:33:28.3912426Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp0v5 amd64 0.86.1-0ubuntu1 [35.6 kB] 2021-05-16T01:33:28.3942634Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-dev amd64 0.86.1-0ubuntu1 [5336 B] 2021-05-16T01:33:28.3952598Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp-dev amd64 0.86.1-0ubuntu1 [10.4 kB] 2021-05-16T01:33:28.7951185Z Fetched 2582 kB in 0s (21.1 MB/s) 2021-05-16T01:33:28.8280290Z Selecting previously unselected package poppler-data. 2021-05-16T01:33:28.8344299Z (Reading database ... 2021-05-16T01:33:28.8345067Z (Reading database ... 5% 2021-05-16T01:33:28.8346026Z (Reading database ... 10% 2021-05-16T01:33:28.8346602Z (Reading database ... 15% 2021-05-16T01:33:28.8347146Z (Reading database ... 20% 2021-05-16T01:33:28.8347923Z (Reading database ... 25% 2021-05-16T01:33:28.8348481Z (Reading database ... 30% 2021-05-16T01:33:28.8349002Z (Reading database ... 35% 2021-05-16T01:33:28.8349541Z (Reading database ... 40% 2021-05-16T01:33:28.8350077Z (Reading database ... 45% 2021-05-16T01:33:28.8350595Z (Reading database ... 50% 2021-05-16T01:33:28.8387053Z (Reading database ... 55% 2021-05-16T01:33:28.8422862Z (Reading database ... 60% 2021-05-16T01:33:28.8465312Z (Reading database ... 65% 2021-05-16T01:33:28.8586650Z (Reading database ... 70% 2021-05-16T01:33:28.8702463Z (Reading database ... 75% 2021-05-16T01:33:28.8968515Z (Reading database ... 80% 2021-05-16T01:33:28.9258481Z (Reading database ... 85% 2021-05-16T01:33:28.9401525Z (Reading database ... 90% 2021-05-16T01:33:28.9480923Z (Reading database ... 95% 2021-05-16T01:33:28.9481501Z (Reading database ... 100% 2021-05-16T01:33:28.9482291Z (Reading database ... 265385 files and directories currently installed.) 2021-05-16T01:33:28.9600502Z Preparing to unpack .../0-poppler-data_0.4.9-2_all.deb ... 2021-05-16T01:33:28.9618914Z Unpacking poppler-data (0.4.9-2) ... 2021-05-16T01:33:29.2139548Z Selecting previously unselected package libopenjp2-7:amd64. 2021-05-16T01:33:29.2422228Z Preparing to unpack .../1-libopenjp2-7_2.3.1-1ubuntu4.20.04.1_amd64.deb ... 2021-05-16T01:33:29.2458204Z Unpacking libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-05-16T01:33:29.2915110Z Selecting previously unselected package libpoppler97:amd64. 2021-05-16T01:33:29.3143528Z Preparing to unpack .../2-libpoppler97_0.86.1-0ubuntu1_amd64.deb ... 2021-05-16T01:33:29.3168655Z Unpacking libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T01:33:29.4397066Z Selecting previously unselected package libpoppler-cpp0v5:amd64. 2021-05-16T01:33:29.4636263Z Preparing to unpack .../3-libpoppler-cpp0v5_0.86.1-0ubuntu1_amd64.deb ... 2021-05-16T01:33:29.4647339Z Unpacking libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T01:33:29.4995268Z Selecting previously unselected package libpoppler-dev:amd64. 2021-05-16T01:33:29.5227551Z Preparing to unpack .../4-libpoppler-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-05-16T01:33:29.5246259Z Unpacking libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T01:33:29.5556049Z Selecting previously unselected package libpoppler-cpp-dev:amd64. 2021-05-16T01:33:29.5764057Z Preparing to unpack .../5-libpoppler-cpp-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-05-16T01:33:29.5783499Z Unpacking libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T01:33:29.6376332Z Setting up poppler-data (0.4.9-2) ... 2021-05-16T01:33:29.6526527Z Setting up libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-05-16T01:33:29.6564620Z Setting up libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T01:33:29.6607414Z Setting up libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T01:33:29.6646143Z Setting up libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T01:33:29.6694091Z Setting up libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-16T01:33:29.6732230Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-16T01:33:29.7705583Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:33:31.9017462Z Reading package lists... 2021-05-16T01:33:32.0455000Z Building dependency tree... 2021-05-16T01:33:32.0472141Z Reading state information... 2021-05-16T01:33:32.1926090Z The following additional packages will be installed: 2021-05-16T01:33:32.1930132Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libsz2 2021-05-16T01:33:32.1934857Z Suggested packages: 2021-05-16T01:33:32.1937583Z libhdf5-doc 2021-05-16T01:33:32.2408931Z The following NEW packages will be installed: 2021-05-16T01:33:32.2415727Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libhdf5-dev 2021-05-16T01:33:32.2420885Z libsz2 2021-05-16T01:33:32.2634906Z 0 upgraded, 7 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:33:32.2635705Z Need to get 4074 kB of archives. 2021-05-16T01:33:32.2636504Z After this operation, 17.6 MB of additional disk space will be used. 2021-05-16T01:33:32.2638983Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 hdf5-helpers amd64 1.10.4+repack-11ubuntu1 [13.6 kB] 2021-05-16T01:33:32.2656709Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec0 amd64 1.0.4-1 [19.1 kB] 2021-05-16T01:33:32.2661885Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsz2 amd64 1.0.4-1 [5188 B] 2021-05-16T01:33:32.2666868Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-103 amd64 1.10.4+repack-11ubuntu1 [1311 kB] 2021-05-16T01:33:32.2887707Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-cpp-103 amd64 1.10.4+repack-11ubuntu1 [120 kB] 2021-05-16T01:33:32.2912585Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec-dev amd64 1.0.4-1 [16.9 kB] 2021-05-16T01:33:32.2918065Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-dev amd64 1.10.4+repack-11ubuntu1 [2589 kB] 2021-05-16T01:33:32.7629684Z Fetched 4074 kB in 0s (34.3 MB/s) 2021-05-16T01:33:32.7912873Z Selecting previously unselected package hdf5-helpers. 2021-05-16T01:33:32.7984201Z (Reading database ... 2021-05-16T01:33:32.7984977Z (Reading database ... 5% 2021-05-16T01:33:32.7985577Z (Reading database ... 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2021-05-16T01:33:32.9109169Z (Reading database ... 265945 files and directories currently installed.) 2021-05-16T01:33:32.9213998Z Preparing to unpack .../0-hdf5-helpers_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-16T01:33:32.9227993Z Unpacking hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-05-16T01:33:32.9510161Z Selecting previously unselected package libaec0:amd64. 2021-05-16T01:33:32.9789880Z Preparing to unpack .../1-libaec0_1.0.4-1_amd64.deb ... 2021-05-16T01:33:32.9819700Z Unpacking libaec0:amd64 (1.0.4-1) ... 2021-05-16T01:33:33.0155025Z Selecting previously unselected package libsz2:amd64. 2021-05-16T01:33:33.0354146Z Preparing to unpack .../2-libsz2_1.0.4-1_amd64.deb ... 2021-05-16T01:33:33.0366382Z Unpacking libsz2:amd64 (1.0.4-1) ... 2021-05-16T01:33:33.0716730Z Selecting previously unselected package libhdf5-103:amd64. 2021-05-16T01:33:33.0920629Z Preparing to unpack .../3-libhdf5-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-16T01:33:33.0941032Z Unpacking libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-16T01:33:33.2436149Z Selecting previously unselected package libhdf5-cpp-103:amd64. 2021-05-16T01:33:33.2629981Z Preparing to unpack .../4-libhdf5-cpp-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-16T01:33:33.2647422Z Unpacking libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-16T01:33:33.3036020Z Selecting previously unselected package libaec-dev:amd64. 2021-05-16T01:33:33.3275472Z Preparing to unpack .../5-libaec-dev_1.0.4-1_amd64.deb ... 2021-05-16T01:33:33.3287789Z Unpacking libaec-dev:amd64 (1.0.4-1) ... 2021-05-16T01:33:33.3576587Z Selecting previously unselected package libhdf5-dev. 2021-05-16T01:33:33.3854008Z Preparing to unpack .../6-libhdf5-dev_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-16T01:33:33.3866412Z Unpacking libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-05-16T01:33:33.7073292Z Setting up hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-05-16T01:33:33.7121209Z Setting up libaec0:amd64 (1.0.4-1) ... 2021-05-16T01:33:33.7165318Z Setting up libsz2:amd64 (1.0.4-1) ... 2021-05-16T01:33:33.7210102Z Setting up libaec-dev:amd64 (1.0.4-1) ... 2021-05-16T01:33:33.7257643Z Setting up libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-16T01:33:33.7293698Z Setting up libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-16T01:33:33.7343222Z Setting up libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-05-16T01:33:33.7419323Z update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 2021-05-16T01:33:33.7448217Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:33:34.5197367Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:33:36.5815585Z Reading package lists... 2021-05-16T01:33:36.7462018Z Building dependency tree... 2021-05-16T01:33:36.7481454Z Reading state information... 2021-05-16T01:33:36.9062443Z The following additional packages will be installed: 2021-05-16T01:33:36.9064559Z libdrm-dev libgl-dev libglu1-mesa libglx-dev 2021-05-16T01:33:36.9548142Z The following NEW packages will be installed: 2021-05-16T01:33:36.9554605Z libdrm-dev libgl-dev libglu1-mesa libglu1-mesa-dev libglx-dev 2021-05-16T01:33:36.9559752Z mesa-common-dev 2021-05-16T01:33:36.9812266Z 0 upgraded, 6 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:33:36.9813055Z Need to get 1761 kB of archives. 2021-05-16T01:33:36.9813871Z After this operation, 5442 kB of additional disk space will be used. 2021-05-16T01:33:36.9815944Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libdrm-dev amd64 2.4.102-1ubuntu1~20.04.1 [126 kB] 2021-05-16T01:33:36.9894541Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libglx-dev amd64 1.3.2-1~ubuntu0.20.04.1 [14.0 kB] 2021-05-16T01:33:36.9901522Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [97.8 kB] 2021-05-16T01:33:36.9929714Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa amd64 9.0.1-1build1 [168 kB] 2021-05-16T01:33:36.9955901Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa-dev amd64 9.0.1-1build1 [207 kB] 2021-05-16T01:33:37.0029221Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-common-dev amd64 20.2.6-0ubuntu0.20.04.1 [1148 kB] 2021-05-16T01:33:37.4728378Z Fetched 1761 kB in 0s (22.7 MB/s) 2021-05-16T01:33:37.5104234Z Selecting previously unselected package libdrm-dev:amd64. 2021-05-16T01:33:37.5121480Z (Reading database ... 2021-05-16T01:33:37.5122060Z (Reading database ... 5% 2021-05-16T01:33:37.5122556Z (Reading database ... 10% 2021-05-16T01:33:37.5123073Z (Reading database ... 15% 2021-05-16T01:33:37.5123564Z (Reading database ... 20% 2021-05-16T01:33:37.5124073Z (Reading database ... 25% 2021-05-16T01:33:37.5124592Z (Reading database ... 30% 2021-05-16T01:33:37.5125093Z (Reading 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(2.4.102-1ubuntu1~20.04.1) ... 2021-05-16T01:33:37.6995822Z Selecting previously unselected package libglx-dev:amd64. 2021-05-16T01:33:37.7194604Z Preparing to unpack .../1-libglx-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T01:33:37.7209006Z Unpacking libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T01:33:37.7636188Z Selecting previously unselected package libgl-dev:amd64. 2021-05-16T01:33:37.7870398Z Preparing to unpack .../2-libgl-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T01:33:37.7887923Z Unpacking libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T01:33:37.8315404Z Selecting previously unselected package libglu1-mesa:amd64. 2021-05-16T01:33:37.8553245Z Preparing to unpack .../3-libglu1-mesa_9.0.1-1build1_amd64.deb ... 2021-05-16T01:33:37.8580142Z Unpacking libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-05-16T01:33:37.9035352Z Selecting previously unselected package libglu1-mesa-dev:amd64. 2021-05-16T01:33:37.9268637Z Preparing to unpack .../4-libglu1-mesa-dev_9.0.1-1build1_amd64.deb ... 2021-05-16T01:33:37.9291519Z Unpacking libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-05-16T01:33:37.9795377Z Selecting previously unselected package mesa-common-dev:amd64. 2021-05-16T01:33:38.0039996Z Preparing to unpack .../5-mesa-common-dev_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-16T01:33:38.0060257Z Unpacking mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T01:33:38.1728412Z Setting up libdrm-dev:amd64 (2.4.102-1ubuntu1~20.04.1) ... 2021-05-16T01:33:38.1774440Z Setting up libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T01:33:38.1823265Z Setting up libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-05-16T01:33:38.1868967Z Setting up libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T01:33:38.1897688Z Setting up libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-05-16T01:33:38.1942948Z Setting up mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T01:33:38.1995995Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:33:39.6179517Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:33:41.7045915Z Reading package lists... 2021-05-16T01:33:41.8749469Z Building dependency tree... 2021-05-16T01:33:41.8768501Z Reading state information... 2021-05-16T01:33:42.0296114Z The following additional packages will be installed: 2021-05-16T01:33:42.0298875Z libprotobuf-lite17 libprotoc17 2021-05-16T01:33:42.0772536Z The following NEW packages will be installed: 2021-05-16T01:33:42.0774974Z libprotobuf-dev libprotobuf-lite17 libprotoc-dev libprotoc17 2021-05-16T01:33:42.0776389Z protobuf-compiler 2021-05-16T01:33:42.1096622Z 0 upgraded, 5 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:33:42.1097752Z Need to get 2754 kB of archives. 2021-05-16T01:33:42.1098778Z After this operation, 19.9 MB of additional disk space will be used. 2021-05-16T01:33:42.1101423Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-lite17 amd64 3.6.1.3-2ubuntu5 [132 kB] 2021-05-16T01:33:42.1134623Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc17 amd64 3.6.1.3-2ubuntu5 [646 kB] 2021-05-16T01:33:42.1482164Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-dev amd64 3.6.1.3-2ubuntu5 [1155 kB] 2021-05-16T01:33:42.2018685Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc-dev amd64 3.6.1.3-2ubuntu5 [793 kB] 2021-05-16T01:33:42.2125555Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 protobuf-compiler amd64 3.6.1.3-2ubuntu5 [27.6 kB] 2021-05-16T01:33:42.6265605Z Fetched 2754 kB in 0s (21.0 MB/s) 2021-05-16T01:33:42.6596647Z Selecting previously unselected package libprotobuf-lite17:amd64. 2021-05-16T01:33:42.6642211Z (Reading database ... 2021-05-16T01:33:42.6642847Z (Reading database ... 5% 2021-05-16T01:33:42.6643350Z (Reading database ... 10% 2021-05-16T01:33:42.6643856Z (Reading database ... 15% 2021-05-16T01:33:42.6644346Z (Reading 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2021-05-16T01:33:42.7777260Z Preparing to unpack .../libprotobuf-lite17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-16T01:33:42.7821128Z Unpacking libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T01:33:42.8274706Z Selecting previously unselected package libprotoc17:amd64. 2021-05-16T01:33:42.8459170Z Preparing to unpack .../libprotoc17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-16T01:33:42.8474237Z Unpacking libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T01:33:42.9395518Z Selecting previously unselected package libprotobuf-dev:amd64. 2021-05-16T01:33:42.9620112Z Preparing to unpack .../libprotobuf-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-16T01:33:42.9635166Z Unpacking libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T01:33:43.1316819Z Selecting previously unselected package libprotoc-dev:amd64. 2021-05-16T01:33:43.1605419Z Preparing to unpack .../libprotoc-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-16T01:33:43.1621237Z Unpacking libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T01:33:43.2835703Z Selecting previously unselected package protobuf-compiler. 2021-05-16T01:33:43.3080462Z Preparing to unpack .../protobuf-compiler_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-16T01:33:43.3093439Z Unpacking protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-05-16T01:33:43.3713106Z Setting up libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T01:33:43.3756849Z Setting up protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-05-16T01:33:43.3807324Z Setting up libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T01:33:43.3849411Z Setting up libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T01:33:43.3884391Z Setting up libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-16T01:33:43.3918053Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:33:44.1167016Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:33:46.2574148Z Reading package lists... 2021-05-16T01:33:46.4189483Z Building dependency tree... 2021-05-16T01:33:46.4208099Z Reading state information... 2021-05-16T01:33:46.5772786Z The following additional packages will be installed: 2021-05-16T01:33:46.5775749Z i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 libasyncns0 2021-05-16T01:33:46.5778255Z libavc1394-0 libavcodec58 libavdevice58 libavfilter7 libavformat58 2021-05-16T01:33:46.5780300Z libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 libcaca0 2021-05-16T01:33:46.5783178Z libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 libcodec2-0.9 2021-05-16T01:33:46.5786557Z libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 libigdgmm11 2021-05-16T01:33:46.5788359Z libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-05-16T01:33:46.5789864Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-05-16T01:33:46.5792996Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-05-16T01:33:46.5794840Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-05-16T01:33:46.5796378Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-05-16T01:33:46.5798178Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-05-16T01:33:46.5799640Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-05-16T01:33:46.5801036Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-05-16T01:33:46.5802383Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-05-16T01:33:46.5803235Z Suggested packages: 2021-05-16T01:33:46.5804471Z ffmpeg-doc i965-va-driver-shaders libbluray-bdj jackd2 libportaudio2 2021-05-16T01:33:46.5805961Z opus-tools pulseaudio libraw1394-doc serdi sndiod sordi speex opencl-icd 2021-05-16T01:33:46.5807624Z libvdpau-va-gl1 nvidia-vdpau-driver nvidia-legacy-340xx-vdpau-driver 2021-05-16T01:33:46.5809099Z nvidia-legacy-304xx-vdpau-driver 2021-05-16T01:33:46.6536615Z The following NEW packages will be installed: 2021-05-16T01:33:46.6541414Z ffmpeg i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 2021-05-16T01:33:46.6544052Z libasyncns0 libavc1394-0 libavcodec58 libavdevice58 libavfilter7 2021-05-16T01:33:46.6546260Z libavformat58 libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 2021-05-16T01:33:46.6548756Z libcaca0 libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 2021-05-16T01:33:46.6551241Z libcodec2-0.9 libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 2021-05-16T01:33:46.6554131Z libigdgmm11 libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-05-16T01:33:46.6556769Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-05-16T01:33:46.6559251Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-05-16T01:33:46.6561717Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-05-16T01:33:46.6566098Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-05-16T01:33:46.6568312Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-05-16T01:33:46.6570334Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-05-16T01:33:46.6572299Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-05-16T01:33:46.6574241Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-05-16T01:33:46.6857826Z 0 upgraded, 76 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:33:46.6859152Z Need to get 47.1 MB of archives. 2021-05-16T01:33:46.6860898Z After this operation, 195 MB of additional disk space will be used. 2021-05-16T01:33:46.6864215Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaom0 amd64 1.0.0.errata1-3build1 [1160 kB] 2021-05-16T01:33:46.7069344Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva2 amd64 2.7.0-2 [53.5 kB] 2021-05-16T01:33:46.7076933Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-drm2 amd64 2.7.0-2 [7044 B] 2021-05-16T01:33:46.7083122Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-x11-2 amd64 2.7.0-2 [11.9 kB] 2021-05-16T01:33:46.7088396Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvdpau1 amd64 1.3-1ubuntu2 [25.6 kB] 2021-05-16T01:33:46.7093847Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1ubuntu1 [30.3 kB] 2021-05-16T01:33:46.7099771Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavutil56 amd64 7:4.2.4-1ubuntu0.1 [241 kB] 2021-05-16T01:33:46.7129813Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcodec2-0.9 amd64 0.9.2-2 [7886 kB] 2021-05-16T01:33:46.8476109Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgsm1 amd64 1.0.18-2 [24.4 kB] 2021-05-16T01:33:46.8485218Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmp3lame0 amd64 3.100-3 [133 kB] 2021-05-16T01:33:46.8512203Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libopus0 amd64 1.3.1-0ubuntu1 [191 kB] 2021-05-16T01:33:46.8539351Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libshine3 amd64 3.1.1-2 [23.2 kB] 2021-05-16T01:33:46.8546897Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsnappy1v5 amd64 1.1.8-1build1 [16.7 kB] 2021-05-16T01:33:46.8553781Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libspeex1 amd64 1.2~rc1.2-1.1ubuntu1 [53.2 kB] 2021-05-16T01:33:46.8565101Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsoxr0 amd64 0.1.3-2build1 [78.0 kB] 2021-05-16T01:33:46.8578754Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswresample3 amd64 7:4.2.4-1ubuntu0.1 [57.1 kB] 2021-05-16T01:33:46.8591897Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtheora0 amd64 1.1.1+dfsg.1-15ubuntu2 [162 kB] 2021-05-16T01:33:46.8612596Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtwolame0 amd64 0.4.0-2 [47.6 kB] 2021-05-16T01:33:46.8624207Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvorbisenc2 amd64 1.3.6-2ubuntu1 [70.7 kB] 2021-05-16T01:33:46.8635908Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwavpack1 amd64 5.2.0-1ubuntu0.1 [77.3 kB] 2021-05-16T01:33:46.8652122Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx264-155 amd64 2:0.155.2917+git0a84d98-2 [521 kB] 2021-05-16T01:33:46.8701782Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx265-179 amd64 3.2.1-1build1 [1060 kB] 2021-05-16T01:33:46.8798531Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxvidcore4 amd64 2:1.3.7-1 [201 kB] 2021-05-16T01:33:46.8823976Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi-common all 0.2.35-17 [32.5 kB] 2021-05-16T01:33:46.8833846Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi0 amd64 0.2.35-17 [237 kB] 2021-05-16T01:33:46.8859468Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavcodec58 amd64 7:4.2.4-1ubuntu0.1 [4876 kB] 2021-05-16T01:33:46.9537803Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libraw1394-11 amd64 2.1.2-1 [30.7 kB] 2021-05-16T01:33:46.9549893Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavc1394-0 amd64 0.5.4-5 [16.2 kB] 2021-05-16T01:33:46.9561089Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libass9 amd64 1:0.14.0-2 [88.0 kB] 2021-05-16T01:33:46.9577077Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbluray2 amd64 1:1.2.0-1 [138 kB] 2021-05-16T01:33:46.9596182Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libchromaprint1 amd64 1.4.3-3build1 [37.6 kB] 2021-05-16T01:33:46.9605591Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgme0 amd64 0.6.2-1build1 [123 kB] 2021-05-16T01:33:46.9623218Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmpg123-0 amd64 1.25.13-1 [124 kB] 2021-05-16T01:33:46.9639971Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenmpt0 amd64 0.4.11-1build1 [599 kB] 2021-05-16T01:33:46.9700148Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-gcrypt-4 amd64 0.9.3-2ubuntu2.1 [201 kB] 2021-05-16T01:33:46.9736382Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavformat58 amd64 7:4.2.4-1ubuntu0.1 [981 kB] 2021-05-16T01:33:46.9878366Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbs2b0 amd64 3.1.0+dfsg-2.2build1 [10.2 kB] 2021-05-16T01:33:46.9886495Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libflite1 amd64 2.1-release-3 [12.8 MB] 2021-05-16T01:33:47.2343257Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libserd-0-0 amd64 0.30.2-1 [46.6 kB] 2021-05-16T01:33:47.2350114Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsord-0-0 amd64 0.16.4-1 [19.5 kB] 2021-05-16T01:33:47.2356885Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsratom-0-0 amd64 0.6.4-1 [16.9 kB] 2021-05-16T01:33:47.2364428Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 liblilv-0-0 amd64 0.24.6-1ubuntu0.1 [40.6 kB] 2021-05-16T01:33:47.2376760Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmysofa1 amd64 1.0~dfsg0-1 [39.2 kB] 2021-05-16T01:33:47.2383279Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libpostproc55 amd64 7:4.2.4-1ubuntu0.1 [55.3 kB] 2021-05-16T01:33:47.2394255Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsamplerate0 amd64 0.1.9-2 [939 kB] 2021-05-16T01:33:47.2517753Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 librubberband2 amd64 1.8.2-1build1 [89.4 kB] 2021-05-16T01:33:47.2536503Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswscale5 amd64 7:4.2.4-1ubuntu0.1 [156 kB] 2021-05-16T01:33:47.2561716Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libvidstab1.1 amd64 1.1.0-2 [35.0 kB] 2021-05-16T01:33:47.2568912Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavfilter7 amd64 7:4.2.4-1ubuntu0.1 [1084 kB] 2021-05-16T01:33:47.2736296Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcaca0 amd64 0.99.beta19-2.1ubuntu1.20.04.1 [202 kB] 2021-05-16T01:33:47.2764339Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio18 amd64 2.0.0-2 [58.6 kB] 2021-05-16T01:33:47.2777796Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-cdda2 amd64 10.2+2.0.0-1 [17.6 kB] 2021-05-16T01:33:47.2782090Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-paranoia2 amd64 10.2+2.0.0-1 [16.2 kB] 2021-05-16T01:33:47.2787181Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdc1394-22 amd64 2.2.5-2.1 [79.6 kB] 2021-05-16T01:33:47.2831948Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libiec61883-0 amd64 1.2.0-3 [24.3 kB] 2021-05-16T01:33:47.2855944Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjack-jackd2-0 amd64 1.9.12~dfsg-2ubuntu2 [267 kB] 2021-05-16T01:33:47.2884376Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal-data all 1:1.19.1-1 [162 kB] 2021-05-16T01:33:47.2916299Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsndio7.0 amd64 1.5.0-3 [24.5 kB] 2021-05-16T01:33:47.2925777Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal1 amd64 1:1.19.1-1 [492 kB] 2021-05-16T01:33:47.3095517Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasyncns0 amd64 0.8-6 [12.1 kB] 2021-05-16T01:33:47.3097756Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libflac8 amd64 1.3.3-1build1 [103 kB] 2021-05-16T01:33:47.3099961Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsndfile1 amd64 1.0.28-7 [170 kB] 2021-05-16T01:33:47.3102225Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libpulse0 amd64 1:13.99.1-1ubuntu3.10 [262 kB] 2021-05-16T01:33:47.3104515Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsdl2-2.0-0 amd64 2.0.10+dfsg1-3 [407 kB] 2021-05-16T01:33:47.3140424Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavdevice58 amd64 7:4.2.4-1ubuntu0.1 [74.3 kB] 2021-05-16T01:33:47.3153689Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavresample4 amd64 7:4.2.4-1ubuntu0.1 [54.2 kB] 2021-05-16T01:33:47.3170078Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 ffmpeg amd64 7:4.2.4-1ubuntu0.1 [1453 kB] 2021-05-16T01:33:47.3436456Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libigdgmm11 amd64 20.1.1+ds1-1 [111 kB] 2021-05-16T01:33:47.3464601Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 intel-media-va-driver amd64 20.1.1+dfsg1-1 [1764 kB] 2021-05-16T01:33:47.3763828Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaacs0 amd64 0.9.0-2 [50.1 kB] 2021-05-16T01:33:47.3770834Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbdplus0 amd64 0.1.2-3 [47.3 kB] 2021-05-16T01:33:47.3782724Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 mesa-va-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2618 kB] 2021-05-16T01:33:47.4255793Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-vdpau-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2744 kB] 2021-05-16T01:33:47.4809305Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 i965-va-driver amd64 2.4.0-0ubuntu1 [924 kB] 2021-05-16T01:33:47.4965036Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 va-driver-all amd64 2.7.0-2 [4020 B] 2021-05-16T01:33:47.4968443Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 vdpau-driver-all amd64 1.3-1ubuntu2 [4596 B] 2021-05-16T01:33:48.0970230Z Fetched 47.1 MB in 1s (56.4 MB/s) 2021-05-16T01:33:48.1307911Z Selecting previously unselected package libaom0:amd64. 2021-05-16T01:33:48.1384121Z (Reading database ... 2021-05-16T01:33:48.1384907Z (Reading database ... 5% 2021-05-16T01:33:48.1386248Z (Reading database ... 10% 2021-05-16T01:33:48.1386844Z (Reading database ... 15% 2021-05-16T01:33:48.1387400Z (Reading database ... 20% 2021-05-16T01:33:48.1387988Z (Reading database ... 25% 2021-05-16T01:33:48.1388509Z (Reading database ... 30% 2021-05-16T01:33:48.1389048Z (Reading database ... 35% 2021-05-16T01:33:48.1389638Z (Reading database ... 40% 2021-05-16T01:33:48.1390263Z (Reading database ... 45% 2021-05-16T01:33:48.1390761Z (Reading database ... 50% 2021-05-16T01:33:48.1437365Z (Reading database ... 55% 2021-05-16T01:33:48.1476622Z (Reading database ... 60% 2021-05-16T01:33:48.1517272Z (Reading database ... 65% 2021-05-16T01:33:48.1643072Z (Reading database ... 70% 2021-05-16T01:33:48.1762464Z (Reading database ... 75% 2021-05-16T01:33:48.2048233Z (Reading database ... 80% 2021-05-16T01:33:48.2376993Z (Reading database ... 85% 2021-05-16T01:33:48.2531852Z (Reading database ... 90% 2021-05-16T01:33:48.2614258Z (Reading database ... 95% 2021-05-16T01:33:48.2614807Z (Reading database ... 100% 2021-05-16T01:33:48.2615597Z (Reading database ... 266807 files and directories currently installed.) 2021-05-16T01:33:48.2734282Z Preparing to unpack .../00-libaom0_1.0.0.errata1-3build1_amd64.deb ... 2021-05-16T01:33:48.2765995Z Unpacking libaom0:amd64 (1.0.0.errata1-3build1) ... 2021-05-16T01:33:48.4235654Z Selecting previously unselected package libva2:amd64. 2021-05-16T01:33:48.4489872Z Preparing to unpack .../01-libva2_2.7.0-2_amd64.deb ... 2021-05-16T01:33:48.4504032Z Unpacking libva2:amd64 (2.7.0-2) ... 2021-05-16T01:33:48.4876233Z Selecting previously unselected package libva-drm2:amd64. 2021-05-16T01:33:48.5096807Z Preparing to unpack .../02-libva-drm2_2.7.0-2_amd64.deb ... 2021-05-16T01:33:48.5115844Z Unpacking libva-drm2:amd64 (2.7.0-2) ... 2021-05-16T01:33:48.5430146Z Selecting previously unselected package libva-x11-2:amd64. 2021-05-16T01:33:48.5678159Z Preparing to unpack .../03-libva-x11-2_2.7.0-2_amd64.deb ... 2021-05-16T01:33:48.5696107Z Unpacking libva-x11-2:amd64 (2.7.0-2) ... 2021-05-16T01:33:48.6075365Z Selecting previously unselected package libvdpau1:amd64. 2021-05-16T01:33:48.6279765Z Preparing to unpack .../04-libvdpau1_1.3-1ubuntu2_amd64.deb ... 2021-05-16T01:33:48.6297969Z Unpacking libvdpau1:amd64 (1.3-1ubuntu2) ... 2021-05-16T01:33:48.6640332Z Selecting previously unselected package ocl-icd-libopencl1:amd64. 2021-05-16T01:33:48.6910442Z Preparing to unpack .../05-ocl-icd-libopencl1_2.2.11-1ubuntu1_amd64.deb ... 2021-05-16T01:33:48.6930549Z Unpacking ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... 2021-05-16T01:33:48.7281344Z Selecting previously unselected package libavutil56:amd64. 2021-05-16T01:33:48.7550075Z Preparing to unpack .../06-libavutil56_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-05-16T01:33:48.7564976Z Unpacking libavutil56:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T01:33:48.8031706Z Selecting previously unselected package libcodec2-0.9:amd64. 2021-05-16T01:33:48.8314418Z Preparing to unpack .../07-libcodec2-0.9_0.9.2-2_amd64.deb ... 2021-05-16T01:33:48.8328678Z Unpacking libcodec2-0.9:amd64 (0.9.2-2) ... 2021-05-16T01:33:49.6075713Z Selecting previously unselected package libgsm1:amd64. 2021-05-16T01:33:49.6276462Z Preparing to unpack .../08-libgsm1_1.0.18-2_amd64.deb ... 2021-05-16T01:33:49.6296563Z Unpacking libgsm1:amd64 (1.0.18-2) ... 2021-05-16T01:33:49.6656150Z Selecting previously unselected package libmp3lame0:amd64. 2021-05-16T01:33:49.6893534Z Preparing to unpack .../09-libmp3lame0_3.100-3_amd64.deb ... 2021-05-16T01:33:49.6908315Z Unpacking libmp3lame0:amd64 (3.100-3) ... 2021-05-16T01:33:49.7355087Z Selecting previously unselected package libopus0:amd64. 2021-05-16T01:33:49.7620725Z Preparing to unpack .../10-libopus0_1.3.1-0ubuntu1_amd64.deb ... 2021-05-16T01:33:49.7636974Z Unpacking libopus0:amd64 (1.3.1-0ubuntu1) ... 2021-05-16T01:33:49.8155032Z Selecting previously unselected package libshine3:amd64. 2021-05-16T01:33:49.8384305Z Preparing to unpack .../11-libshine3_3.1.1-2_amd64.deb ... 2021-05-16T01:33:49.8394027Z Unpacking libshine3:amd64 (3.1.1-2) ... 2021-05-16T01:33:49.8715081Z Selecting previously unselected package libsnappy1v5:amd64. 2021-05-16T01:33:49.8955167Z Preparing to unpack .../12-libsnappy1v5_1.1.8-1build1_amd64.deb ... 2021-05-16T01:33:49.8966491Z Unpacking libsnappy1v5:amd64 (1.1.8-1build1) ... 2021-05-16T01:33:49.9314721Z Selecting previously unselected package libspeex1:amd64. 2021-05-16T01:33:49.9517668Z Preparing to unpack .../13-libspeex1_1.2~rc1.2-1.1ubuntu1_amd64.deb ... 2021-05-16T01:33:49.9533138Z Unpacking libspeex1:amd64 (1.2~rc1.2-1.1ubuntu1) ... 2021-05-16T01:33:49.9915106Z Selecting previously unselected package libsoxr0:amd64. 2021-05-16T01:33:50.0172756Z Preparing to unpack .../14-libsoxr0_0.1.3-2build1_amd64.deb ... 2021-05-16T01:33:50.0184956Z Unpacking libsoxr0:amd64 (0.1.3-2build1) ... 2021-05-16T01:33:50.0635042Z Selecting previously unselected package libswresample3:amd64. 2021-05-16T01:33:50.0858102Z Preparing to unpack .../15-libswresample3_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-05-16T01:33:50.0872495Z Unpacking libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T01:33:50.1235779Z Selecting previously unselected package libtheora0:amd64. 2021-05-16T01:33:50.1494134Z Preparing to unpack .../16-libtheora0_1.1.1+dfsg.1-15ubuntu2_amd64.deb ... 2021-05-16T01:33:50.1505102Z Unpacking libtheora0:amd64 (1.1.1+dfsg.1-15ubuntu2) ... 2021-05-16T01:33:50.2035844Z Selecting previously unselected package libtwolame0:amd64. 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Setting up ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... 2021-05-16T01:33:57.5061504Z Setting up libasyncns0:amd64 (0.8-6) ... 2021-05-16T01:33:57.5093898Z Setting up libvdpau1:amd64 (1.3-1ubuntu2) ... 2021-05-16T01:33:57.5142442Z Setting up libwavpack1:amd64 (5.2.0-1ubuntu0.1) ... 2021-05-16T01:33:57.5165562Z Setting up libbs2b0:amd64 (3.1.0+dfsg-2.2build1) ... 2021-05-16T01:33:57.5192545Z Setting up libtheora0:amd64 (1.1.1+dfsg.1-15ubuntu2) ... 2021-05-16T01:33:57.5214549Z Setting up libopenal-data (1:1.19.1-1) ... 2021-05-16T01:33:57.5253639Z Setting up mesa-va-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T01:33:57.5306091Z Setting up libbluray2:amd64 (1:1.2.0-1) ... 2021-05-16T01:33:57.5345776Z Setting up libsamplerate0:amd64 (0.1.9-2) ... 2021-05-16T01:33:57.5414135Z Setting up libva-x11-2:amd64 (2.7.0-2) ... 2021-05-16T01:33:57.5459475Z Setting up libopenmpt0:amd64 (0.4.11-1build1) ... 2021-05-16T01:33:57.5491321Z Setting up libzvbi-common (0.2.35-17) ... 2021-05-16T01:33:57.5518279Z Setting up libmp3lame0:amd64 (3.100-3) ... 2021-05-16T01:33:57.5545472Z Setting up i965-va-driver:amd64 (2.4.0-0ubuntu1) ... 2021-05-16T01:33:57.5582685Z Setting up libvorbisenc2:amd64 (1.3.6-2ubuntu1) ... 2021-05-16T01:33:57.5615016Z Setting up libiec61883-0:amd64 (1.2.0-3) ... 2021-05-16T01:33:57.5656119Z Setting up libserd-0-0:amd64 (0.30.2-1) ... 2021-05-16T01:33:57.5690295Z Setting up libavc1394-0:amd64 (0.5.4-5) ... 2021-05-16T01:33:57.5726362Z Setting up mesa-vdpau-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T01:33:57.5771007Z Setting up libzvbi0:amd64 (0.2.35-17) ... 2021-05-16T01:33:57.5814639Z Setting up libcdio-cdda2:amd64 (10.2+2.0.0-1) ... 2021-05-16T01:33:57.5850159Z Setting up libcdio-paranoia2:amd64 (10.2+2.0.0-1) ... 2021-05-16T01:33:57.5876530Z Setting up libopenal1:amd64 (1:1.19.1-1) ... 2021-05-16T01:33:57.5915925Z Setting up libavutil56:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T01:33:57.5949370Z Setting up va-driver-all:amd64 (2.7.0-2) ... 2021-05-16T01:33:57.5977581Z Setting up libpostproc55:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T01:33:57.6014688Z Setting up librubberband2:amd64 (1.8.2-1build1) ... 2021-05-16T01:33:57.6046654Z Setting up libjack-jackd2-0:amd64 (1.9.12~dfsg-2ubuntu2) ... 2021-05-16T01:33:57.6084733Z Setting up vdpau-driver-all:amd64 (1.3-1ubuntu2) ... 2021-05-16T01:33:57.6130268Z Setting up libsord-0-0:amd64 (0.16.4-1) ... 2021-05-16T01:33:57.6163441Z Setting up libsratom-0-0:amd64 (0.6.4-1) ... 2021-05-16T01:33:57.6203413Z Setting up libswscale5:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T01:33:57.6242346Z Setting up libsndfile1:amd64 (1.0.28-7) ... 2021-05-16T01:33:57.6275603Z Setting up liblilv-0-0:amd64 (0.24.6-1ubuntu0.1) ... 2021-05-16T01:33:57.6302374Z Setting up libpulse0:amd64 (1:13.99.1-1ubuntu3.10) ... 2021-05-16T01:33:57.6404701Z Setting up libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T01:33:57.6438091Z Setting up libavresample4:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T01:33:57.6477020Z Setting up libavcodec58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T01:33:57.6513469Z Setting up libsdl2-2.0-0:amd64 (2.0.10+dfsg1-3) ... 2021-05-16T01:33:57.6549319Z Setting up libchromaprint1:amd64 (1.4.3-3build1) ... 2021-05-16T01:33:57.6596969Z Setting up libavformat58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T01:33:57.6637228Z Setting up libavfilter7:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T01:33:57.6684880Z Setting up libavdevice58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-16T01:33:57.6720693Z Setting up ffmpeg (7:4.2.4-1ubuntu0.1) ... 2021-05-16T01:33:57.6825692Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:33:58.7445931Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:34:00.8194782Z Reading package lists... 2021-05-16T01:34:00.9710403Z Building dependency tree... 2021-05-16T01:34:00.9729589Z Reading state information... 2021-05-16T01:34:01.1235439Z The following additional packages will be installed: 2021-05-16T01:34:01.1238829Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-05-16T01:34:01.1730912Z The following NEW packages will be installed: 2021-05-16T01:34:01.1733194Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-05-16T01:34:01.1734580Z libmagick++-dev 2021-05-16T01:34:01.1936056Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:34:01.1936818Z Need to get 309 kB of archives. 2021-05-16T01:34:01.1937813Z After this operation, 2202 kB of additional disk space will be used. 2021-05-16T01:34:01.1939982Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6-headers all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [47.5 kB] 2021-05-16T01:34:01.1974342Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-8 amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [133 kB] 2021-05-16T01:34:01.1999703Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-dev amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [127 kB] 2021-05-16T01:34:01.2023075Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-dev all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [1404 B] 2021-05-16T01:34:01.6196538Z Fetched 309 kB in 0s (12.6 MB/s) 2021-05-16T01:34:01.6557938Z Selecting previously unselected package libmagick++-6-headers. 2021-05-16T01:34:01.6631651Z (Reading database ... 2021-05-16T01:34:01.6632272Z (Reading database ... 5% 2021-05-16T01:34:01.6633141Z (Reading database ... 10% 2021-05-16T01:34:01.6633767Z (Reading database ... 15% 2021-05-16T01:34:01.6634221Z (Reading database ... 20% 2021-05-16T01:34:01.6634702Z (Reading database ... 25% 2021-05-16T01:34:01.6635146Z (Reading database ... 30% 2021-05-16T01:34:01.6635571Z (Reading database ... 35% 2021-05-16T01:34:01.6636022Z (Reading database ... 40% 2021-05-16T01:34:01.6636447Z (Reading database ... 45% 2021-05-16T01:34:01.6636890Z (Reading database ... 50% 2021-05-16T01:34:01.6682989Z (Reading database ... 55% 2021-05-16T01:34:01.6723598Z (Reading database ... 60% 2021-05-16T01:34:01.6752496Z (Reading database ... 65% 2021-05-16T01:34:01.6878951Z (Reading database ... 70% 2021-05-16T01:34:01.7003573Z (Reading database ... 75% 2021-05-16T01:34:01.7030288Z (Reading database ... 80% 2021-05-16T01:34:01.7559201Z (Reading database ... 85% 2021-05-16T01:34:01.7738339Z (Reading database ... 90% 2021-05-16T01:34:01.7818742Z (Reading database ... 95% 2021-05-16T01:34:01.7820314Z (Reading database ... 100% 2021-05-16T01:34:01.7822108Z (Reading database ... 267348 files and directories currently installed.) 2021-05-16T01:34:01.7937253Z Preparing to unpack .../libmagick++-6-headers_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_all.deb ... 2021-05-16T01:34:01.8032582Z Unpacking libmagick++-6-headers (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T01:34:01.8635521Z Selecting previously unselected package libmagick++-6.q16-8:amd64. 2021-05-16T01:34:01.8870728Z Preparing to unpack .../libmagick++-6.q16-8_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-05-16T01:34:01.8896782Z Unpacking libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T01:34:01.9316227Z Selecting previously unselected package libmagick++-6.q16-dev:amd64. 2021-05-16T01:34:01.9580580Z Preparing to unpack .../libmagick++-6.q16-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-05-16T01:34:01.9600809Z Unpacking libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T01:34:02.0755674Z Selecting previously unselected package libmagick++-dev. 2021-05-16T01:34:02.0968234Z Preparing to unpack .../libmagick++-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_all.deb ... 2021-05-16T01:34:02.1079758Z Unpacking libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T01:34:02.1688605Z Setting up libmagick++-6-headers (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T01:34:02.1794573Z Setting up libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T01:34:02.1841521Z Setting up libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T01:34:02.1889791Z Setting up libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-16T01:34:02.1994720Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:34:04.2738758Z Reading package lists... 2021-05-16T01:34:04.4327582Z Building dependency tree... 2021-05-16T01:34:04.4347519Z Reading state information... 2021-05-16T01:34:04.5883694Z imagemagick is already the newest version (8:6.9.10.23+dfsg-2.1ubuntu11.2). 2021-05-16T01:34:04.5885860Z The following additional packages will be installed: 2021-05-16T01:34:04.5890422Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 libgs9 libgs9-common 2021-05-16T01:34:04.5892471Z libijs-0.35 libjbig2dec0 2021-05-16T01:34:04.5893520Z Suggested packages: 2021-05-16T01:34:04.5895487Z fonts-noto fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre 2021-05-16T01:34:04.5897240Z ghostscript-x 2021-05-16T01:34:04.6374283Z The following NEW packages will be installed: 2021-05-16T01:34:04.6379346Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 ghostscript libgs9 2021-05-16T01:34:04.6387455Z libgs9-common libijs-0.35 libjbig2dec0 2021-05-16T01:34:04.6576467Z 0 upgraded, 8 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:34:04.6577247Z Need to get 11.2 MB of archives. 2021-05-16T01:34:04.6578676Z After this operation, 39.1 MB of additional disk space will be used. 2021-05-16T01:34:04.6580512Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-droid-fallback all 1:6.0.1r16-1.1 [1805 kB] 2021-05-16T01:34:04.6813098Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 fonts-noto-mono all 20200323-1build1~ubuntu20.04.1 [80.6 kB] 2021-05-16T01:34:04.6824253Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-urw-base35 all 20170801.1-3 [6333 kB] 2021-05-16T01:34:04.7337856Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9-common all 9.50~dfsg-5ubuntu4.2 [681 kB] 2021-05-16T01:34:04.7413132Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libijs-0.35 amd64 0.35-15 [15.7 kB] 2021-05-16T01:34:04.7415433Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjbig2dec0 amd64 0.18-1ubuntu1 [60.0 kB] 2021-05-16T01:34:04.7423197Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9 amd64 9.50~dfsg-5ubuntu4.2 [2172 kB] 2021-05-16T01:34:04.7651805Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 ghostscript amd64 9.50~dfsg-5ubuntu4.2 [51.6 kB] 2021-05-16T01:34:05.1897154Z Fetched 11.2 MB in 0s (91.8 MB/s) 2021-05-16T01:34:05.2256726Z Selecting previously unselected package fonts-droid-fallback. 2021-05-16T01:34:05.2333848Z (Reading database ... 2021-05-16T01:34:05.2334500Z (Reading database ... 5% 2021-05-16T01:34:05.2335280Z (Reading 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... 100% 2021-05-16T01:34:05.3462140Z (Reading database ... 267393 files and directories currently installed.) 2021-05-16T01:34:05.3570380Z Preparing to unpack .../0-fonts-droid-fallback_1%3a6.0.1r16-1.1_all.deb ... 2021-05-16T01:34:05.3829955Z Unpacking fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-05-16T01:34:05.6035877Z Selecting previously unselected package fonts-noto-mono. 2021-05-16T01:34:05.6259104Z Preparing to unpack .../1-fonts-noto-mono_20200323-1build1~ubuntu20.04.1_all.deb ... 2021-05-16T01:34:05.6274018Z Unpacking fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-05-16T01:34:05.6645869Z Selecting previously unselected package fonts-urw-base35. 2021-05-16T01:34:05.6933963Z Preparing to unpack .../2-fonts-urw-base35_20170801.1-3_all.deb ... 2021-05-16T01:34:05.7581403Z Unpacking fonts-urw-base35 (20170801.1-3) ... 2021-05-16T01:34:06.1731398Z Selecting previously unselected package libgs9-common. 2021-05-16T01:34:06.1996324Z Preparing to unpack .../3-libgs9-common_9.50~dfsg-5ubuntu4.2_all.deb ... 2021-05-16T01:34:06.2013937Z Unpacking libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-05-16T01:34:06.3116506Z Selecting previously unselected package libijs-0.35:amd64. 2021-05-16T01:34:06.3352828Z Preparing to unpack .../4-libijs-0.35_0.35-15_amd64.deb ... 2021-05-16T01:34:06.3384247Z Unpacking libijs-0.35:amd64 (0.35-15) ... 2021-05-16T01:34:06.3716081Z Selecting previously unselected package libjbig2dec0:amd64. 2021-05-16T01:34:06.3947664Z Preparing to unpack .../5-libjbig2dec0_0.18-1ubuntu1_amd64.deb ... 2021-05-16T01:34:06.3958704Z Unpacking libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-05-16T01:34:06.4355065Z Selecting previously unselected package libgs9:amd64. 2021-05-16T01:34:06.4586544Z Preparing to unpack .../6-libgs9_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-05-16T01:34:06.4597430Z Unpacking libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-05-16T01:34:06.7555596Z Selecting previously unselected package ghostscript. 2021-05-16T01:34:06.7807068Z Preparing to unpack .../7-ghostscript_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-05-16T01:34:06.7823079Z Unpacking ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-05-16T01:34:06.8492785Z Setting up fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-05-16T01:34:06.8559361Z Setting up libijs-0.35:amd64 (0.35-15) ... 2021-05-16T01:34:06.8618576Z Setting up fonts-urw-base35 (20170801.1-3) ... 2021-05-16T01:34:06.9250733Z Setting up libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-05-16T01:34:06.9282056Z Setting up fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-05-16T01:34:06.9553153Z Setting up libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-05-16T01:34:06.9594910Z Setting up libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-05-16T01:34:06.9624824Z Setting up ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-05-16T01:34:06.9756725Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-16T01:34:07.0970380Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:34:07.1193744Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:34:10.1719884Z Reading package lists... 2021-05-16T01:34:10.3214128Z Building dependency tree... 2021-05-16T01:34:10.3235569Z Reading state information... 2021-05-16T01:34:10.4718848Z The following additional packages will be installed: 2021-05-16T01:34:10.4721118Z libudunits2-0 libudunits2-data 2021-05-16T01:34:10.5175206Z The following NEW packages will be installed: 2021-05-16T01:34:10.5180533Z libudunits2-0 libudunits2-data libudunits2-dev 2021-05-16T01:34:10.5385973Z 0 upgraded, 3 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:34:10.5386756Z Need to get 429 kB of archives. 2021-05-16T01:34:10.5387511Z After this operation, 1026 kB of additional disk space will be used. 2021-05-16T01:34:10.5389714Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-data all 2.2.26-5 [18.8 kB] 2021-05-16T01:34:10.5401693Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-0 amd64 2.2.26-5 [48.9 kB] 2021-05-16T01:34:10.5411709Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-dev amd64 2.2.26-5 [362 kB] 2021-05-16T01:34:10.9706226Z Fetched 429 kB in 0s (17.7 MB/s) 2021-05-16T01:34:10.9995615Z Selecting previously unselected package libudunits2-data. 2021-05-16T01:34:11.0068327Z (Reading database ... 2021-05-16T01:34:11.0069043Z (Reading database ... 5% 2021-05-16T01:34:11.0069637Z (Reading database ... 10% 2021-05-16T01:34:11.0070247Z (Reading database ... 15% 2021-05-16T01:34:11.0070900Z (Reading database ... 20% 2021-05-16T01:34:11.0071406Z (Reading database ... 25% 2021-05-16T01:34:11.0071928Z (Reading database ... 30% 2021-05-16T01:34:11.0072441Z (Reading database ... 35% 2021-05-16T01:34:11.0072952Z (Reading database ... 40% 2021-05-16T01:34:11.0074267Z (Reading database ... 45% 2021-05-16T01:34:11.0074742Z (Reading database ... 50% 2021-05-16T01:34:11.0112106Z (Reading database ... 55% 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(2.2.26-5) ... 2021-05-16T01:34:11.2226452Z Selecting previously unselected package libudunits2-dev:amd64. 2021-05-16T01:34:11.2506534Z Preparing to unpack .../libudunits2-dev_2.2.26-5_amd64.deb ... 2021-05-16T01:34:11.2520026Z Unpacking libudunits2-dev:amd64 (2.2.26-5) ... 2021-05-16T01:34:11.3304131Z Setting up libudunits2-data (2.2.26-5) ... 2021-05-16T01:34:11.3346894Z Setting up libudunits2-0:amd64 (2.2.26-5) ... 2021-05-16T01:34:11.3389069Z Setting up libudunits2-dev:amd64 (2.2.26-5) ... 2021-05-16T01:34:11.3434221Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-16T01:34:11.4532964Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:34:13.4819297Z Reading package lists... 2021-05-16T01:34:13.6275088Z Building dependency tree... 2021-05-16T01:34:13.6296288Z Reading state information... 2021-05-16T01:34:13.8175289Z The following NEW packages will be installed: 2021-05-16T01:34:13.8179344Z libjq-dev 2021-05-16T01:34:13.8375519Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:34:13.8377803Z Need to get 11.2 kB of archives. 2021-05-16T01:34:13.8378610Z After this operation, 47.1 kB of additional disk space will be used. 2021-05-16T01:34:13.8380488Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libjq-dev amd64 1.6-1ubuntu0.20.04.1 [11.2 kB] 2021-05-16T01:34:14.2471152Z Fetched 11.2 kB in 0s (724 kB/s) 2021-05-16T01:34:14.2763721Z Selecting previously unselected package libjq-dev:amd64. 2021-05-16T01:34:14.2834502Z (Reading database ... 2021-05-16T01:34:14.2835206Z (Reading database ... 5% 2021-05-16T01:34:14.2836030Z (Reading database ... 10% 2021-05-16T01:34:14.2836693Z (Reading database ... 15% 2021-05-16T01:34:14.2837333Z (Reading database ... 20% 2021-05-16T01:34:14.2837998Z (Reading database ... 25% 2021-05-16T01:34:14.2838646Z (Reading database ... 30% 2021-05-16T01:34:14.2839279Z (Reading database ... 35% 2021-05-16T01:34:14.2839950Z (Reading database ... 40% 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(1.6-1ubuntu0.20.04.1) ... 2021-05-16T01:34:16.4302673Z Reading package lists... 2021-05-16T01:34:16.5773604Z Building dependency tree... 2021-05-16T01:34:16.5790919Z Reading state information... 2021-05-16T01:34:16.7706744Z The following NEW packages will be installed: 2021-05-16T01:34:16.7710110Z libmng2 2021-05-16T01:34:16.7903694Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:34:16.7904517Z Need to get 168 kB of archives. 2021-05-16T01:34:16.7905309Z After this operation, 571 kB of additional disk space will be used. 2021-05-16T01:34:16.7907598Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmng2 amd64 2.0.3+dfsg-3 [168 kB] 2021-05-16T01:34:17.1998692Z Fetched 168 kB in 0s (8941 kB/s) 2021-05-16T01:34:17.2355165Z Selecting previously unselected package libmng2:amd64. 2021-05-16T01:34:17.2424420Z (Reading database ... 2021-05-16T01:34:17.2425524Z (Reading database ... 5% 2021-05-16T01:34:17.2426241Z (Reading database ... 10% 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2021-05-16T01:34:17.3559434Z (Reading database ... 267992 files and directories currently installed.) 2021-05-16T01:34:17.3663845Z Preparing to unpack .../libmng2_2.0.3+dfsg-3_amd64.deb ... 2021-05-16T01:34:17.3690327Z Unpacking libmng2:amd64 (2.0.3+dfsg-3) ... 2021-05-16T01:34:17.4462330Z Setting up libmng2:amd64 (2.0.3+dfsg-3) ... 2021-05-16T01:34:17.4513045Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:34:19.4608543Z Reading package lists... 2021-05-16T01:34:19.6048550Z Building dependency tree... 2021-05-16T01:34:19.6068945Z Reading state information... 2021-05-16T01:34:19.7243332Z E: Unable to locate package libmng1 2021-05-16T01:34:20.6656915Z E: Unable to locate package libapparmor-devel 2021-05-16T01:34:20.6657723Z Reading package lists... 2021-05-16T01:34:20.6668012Z Building dependency tree... 2021-05-16T01:34:20.6669517Z Reading state information... 2021-05-16T01:34:20.6670778Z Reading package lists... 2021-05-16T01:34:20.6672049Z Building dependency tree... 2021-05-16T01:34:20.6673329Z Reading state information... 2021-05-16T01:34:20.6675212Z The following additional packages will be installed: 2021-05-16T01:34:20.6677118Z libij-java 2021-05-16T01:34:20.6678502Z The following NEW packages will be installed: 2021-05-16T01:34:20.6680090Z imagej libij-java 2021-05-16T01:34:20.6681673Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:34:20.6683544Z Need to get 2328 kB of archives. 2021-05-16T01:34:20.6685140Z After this operation, 2498 kB of additional disk space will be used. 2021-05-16T01:34:20.6688178Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libij-java all 1.52r-1 [2284 kB] 2021-05-16T01:34:20.6691647Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 imagej all 1.52r-1 [43.7 kB] 2021-05-16T01:34:20.9622638Z Fetched 2328 kB in 0s (42.0 MB/s) 2021-05-16T01:34:20.9965856Z Selecting previously unselected package libij-java. 2021-05-16T01:34:21.0040968Z (Reading 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lists... 2021-05-16T01:34:26.0303333Z Building dependency tree... 2021-05-16T01:34:26.0324221Z Reading state information... 2021-05-16T01:34:26.1769737Z Suggested packages: 2021-05-16T01:34:26.1772158Z bowtie2-examples 2021-05-16T01:34:26.2207619Z The following NEW packages will be installed: 2021-05-16T01:34:26.2213091Z bowtie2 2021-05-16T01:34:26.2416220Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:34:26.2417289Z Need to get 1324 kB of archives. 2021-05-16T01:34:26.2418322Z After this operation, 5630 kB of additional disk space will be used. 2021-05-16T01:34:26.2420521Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 bowtie2 amd64 2.3.5.1-6build1 [1324 kB] 2021-05-16T01:34:26.6778095Z Fetched 1324 kB in 0s (30.1 MB/s) 2021-05-16T01:34:26.7079146Z Selecting previously unselected package bowtie2. 2021-05-16T01:34:26.7155184Z (Reading database ... 2021-05-16T01:34:26.7156022Z (Reading database ... 5% 2021-05-16T01:34:26.7156700Z (Reading database ... 10% 2021-05-16T01:34:26.7157351Z (Reading database ... 15% 2021-05-16T01:34:26.7158007Z (Reading database ... 20% 2021-05-16T01:34:26.7158667Z (Reading database ... 25% 2021-05-16T01:34:26.7159326Z (Reading database ... 30% 2021-05-16T01:34:26.7159962Z (Reading database ... 35% 2021-05-16T01:34:26.7160609Z (Reading database ... 40% 2021-05-16T01:34:26.7161249Z (Reading database ... 45% 2021-05-16T01:34:26.7161889Z (Reading database ... 50% 2021-05-16T01:34:26.7186867Z (Reading database ... 55% 2021-05-16T01:34:26.7235023Z (Reading database ... 60% 2021-05-16T01:34:26.7259338Z (Reading database ... 65% 2021-05-16T01:34:26.7380956Z (Reading database ... 70% 2021-05-16T01:34:26.7493459Z (Reading database ... 75% 2021-05-16T01:34:26.7517905Z (Reading database ... 80% 2021-05-16T01:34:26.8039646Z (Reading database ... 85% 2021-05-16T01:34:26.8201073Z (Reading database ... 90% 2021-05-16T01:34:26.8274544Z (Reading database ... 95% 2021-05-16T01:34:26.8275329Z (Reading database ... 100% 2021-05-16T01:34:26.8276488Z (Reading database ... 268021 files and directories currently installed.) 2021-05-16T01:34:26.8382973Z Preparing to unpack .../bowtie2_2.3.5.1-6build1_amd64.deb ... 2021-05-16T01:34:26.8399552Z Unpacking bowtie2 (2.3.5.1-6build1) ... 2021-05-16T01:34:27.0331678Z Setting up bowtie2 (2.3.5.1-6build1) ... 2021-05-16T01:34:27.0371334Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:34:29.8840162Z Reading package lists... 2021-05-16T01:34:30.0446315Z Building dependency tree... 2021-05-16T01:34:30.0466511Z Reading state information... 2021-05-16T01:34:30.1794575Z E: Unable to locate package install 2021-05-16T01:34:30.1795343Z E: Unable to locate package gdal 2021-05-16T01:34:30.2481442Z Reading package lists... 2021-05-16T01:34:30.4123459Z Building dependency tree... 2021-05-16T01:34:30.4143369Z Reading state information... 2021-05-16T01:34:30.4377449Z Package insighttoolkit4-python is not available, but is referred to by another package. 2021-05-16T01:34:30.4381044Z This may mean that the package is missing, has been obsoleted, or 2021-05-16T01:34:30.4381837Z is only available from another source 2021-05-16T01:34:30.4382228Z 2021-05-16T01:34:30.5394649Z E: Package 'insighttoolkit4-python' has no installation candidate 2021-05-16T01:34:30.6034633Z Reading package lists... 2021-05-16T01:34:30.7435628Z Building dependency tree... 2021-05-16T01:34:30.7455257Z Reading state information... 2021-05-16T01:34:30.7695026Z Package libav-tools is not available, but is referred to by another package. 2021-05-16T01:34:30.7697491Z This may mean that the package is missing, has been obsoleted, or 2021-05-16T01:34:30.7699120Z is only available from another source 2021-05-16T01:34:30.7700654Z However the following packages replace it: 2021-05-16T01:34:30.7701844Z ffmpeg 2021-05-16T01:34:30.7702562Z 2021-05-16T01:34:30.8721764Z E: Package 'libav-tools' has no installation candidate 2021-05-16T01:34:30.9389531Z Reading package lists... 2021-05-16T01:34:31.0848857Z Building dependency tree... 2021-05-16T01:34:31.0871291Z Reading state information... 2021-05-16T01:34:31.2372983Z The following additional packages will be installed: 2021-05-16T01:34:31.2374522Z libgcrypt20-dev libgit2-28 libgpg-error-dev libhttp-parser-dev 2021-05-16T01:34:31.2377766Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-05-16T01:34:31.2382283Z libssh2-1-dev 2021-05-16T01:34:31.2390048Z Suggested packages: 2021-05-16T01:34:31.2391032Z libgcrypt20-doc libmbedtls-doc 2021-05-16T01:34:31.2858531Z The following NEW packages will be installed: 2021-05-16T01:34:31.2860045Z libgcrypt20-dev libgit2-28 libgit2-dev libgpg-error-dev libhttp-parser-dev 2021-05-16T01:34:31.2864040Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-05-16T01:34:31.2868800Z libssh2-1-dev 2021-05-16T01:34:31.3078762Z 0 upgraded, 11 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:34:31.3079546Z Need to get 2667 kB of archives. 2021-05-16T01:34:31.3080529Z After this operation, 11.2 MB of additional disk space will be used. 2021-05-16T01:34:31.3082362Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgpg-error-dev amd64 1.37-1 [109 kB] 2021-05-16T01:34:31.3123960Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcrypt20-dev amd64 1.8.5-5ubuntu1 [470 kB] 2021-05-16T01:34:31.3219315Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser2.9 amd64 2.9.2-2 [21.8 kB] 2021-05-16T01:34:31.3224956Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedcrypto3 amd64 2.16.4-1ubuntu2 [150 kB] 2021-05-16T01:34:31.3242213Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedx509-0 amd64 2.16.4-1ubuntu2 [42.3 kB] 2021-05-16T01:34:31.3249394Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls12 amd64 2.16.4-1ubuntu2 [71.8 kB] 2021-05-16T01:34:31.3258704Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-28 amd64 0.28.4+dfsg.1-2 [403 kB] 2021-05-16T01:34:31.3298383Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls-dev amd64 2.16.4-1ubuntu2 [444 kB] 2021-05-16T01:34:31.3369883Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libssh2-1-dev amd64 1.8.0-2.1build1 [244 kB] 2021-05-16T01:34:31.3408483Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser-dev amd64 2.9.2-2 [20.2 kB] 2021-05-16T01:34:31.3416066Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-dev amd64 0.28.4+dfsg.1-2 [691 kB] 2021-05-16T01:34:31.7520234Z Fetched 2667 kB in 0s (42.2 MB/s) 2021-05-16T01:34:31.7835702Z Selecting previously unselected package libgpg-error-dev. 2021-05-16T01:34:31.7904510Z (Reading database ... 2021-05-16T01:34:31.7905331Z (Reading database ... 5% 2021-05-16T01:34:31.7906015Z (Reading database 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2021-05-16T01:34:31.8973610Z (Reading database ... 268047 files and directories currently installed.) 2021-05-16T01:34:31.9066958Z Preparing to unpack .../00-libgpg-error-dev_1.37-1_amd64.deb ... 2021-05-16T01:34:31.9086524Z Unpacking libgpg-error-dev (1.37-1) ... 2021-05-16T01:34:31.9497605Z Selecting previously unselected package libgcrypt20-dev. 2021-05-16T01:34:31.9763829Z Preparing to unpack .../01-libgcrypt20-dev_1.8.5-5ubuntu1_amd64.deb ... 2021-05-16T01:34:31.9774704Z Unpacking libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-05-16T01:34:32.0556066Z Selecting previously unselected package libhttp-parser2.9:amd64. 2021-05-16T01:34:32.0784534Z Preparing to unpack .../02-libhttp-parser2.9_2.9.2-2_amd64.deb ... 2021-05-16T01:34:32.0809826Z Unpacking libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-05-16T01:34:32.1155692Z Selecting previously unselected package libmbedcrypto3:amd64. 2021-05-16T01:34:32.1384373Z Preparing to unpack .../03-libmbedcrypto3_2.16.4-1ubuntu2_amd64.deb ... 2021-05-16T01:34:32.1401779Z Unpacking libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T01:34:32.1806784Z Selecting previously unselected package libmbedx509-0:amd64. 2021-05-16T01:34:32.2083784Z Preparing to unpack .../04-libmbedx509-0_2.16.4-1ubuntu2_amd64.deb ... 2021-05-16T01:34:32.2102571Z Unpacking libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T01:34:32.2515073Z Selecting previously unselected package libmbedtls12:amd64. 2021-05-16T01:34:32.2716045Z Preparing to unpack .../05-libmbedtls12_2.16.4-1ubuntu2_amd64.deb ... 2021-05-16T01:34:32.2734373Z Unpacking libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T01:34:32.3075158Z Selecting previously unselected package libgit2-28:amd64. 2021-05-16T01:34:32.3374827Z Preparing to unpack .../06-libgit2-28_0.28.4+dfsg.1-2_amd64.deb ... 2021-05-16T01:34:32.3385667Z Unpacking libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-05-16T01:34:32.4074355Z Selecting previously unselected package libmbedtls-dev:amd64. 2021-05-16T01:34:32.4345337Z Preparing to unpack .../07-libmbedtls-dev_2.16.4-1ubuntu2_amd64.deb ... 2021-05-16T01:34:32.4361094Z Unpacking libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T01:34:32.5155365Z Selecting previously unselected package libssh2-1-dev:amd64. 2021-05-16T01:34:32.5385517Z Preparing to unpack .../08-libssh2-1-dev_1.8.0-2.1build1_amd64.deb ... 2021-05-16T01:34:32.5404714Z Unpacking libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-05-16T01:34:32.6018274Z Selecting previously unselected package libhttp-parser-dev. 2021-05-16T01:34:32.6292314Z Preparing to unpack .../09-libhttp-parser-dev_2.9.2-2_amd64.deb ... 2021-05-16T01:34:32.6304196Z Unpacking libhttp-parser-dev (2.9.2-2) ... 2021-05-16T01:34:32.6697709Z Selecting previously unselected package libgit2-dev:amd64. 2021-05-16T01:34:32.6944183Z Preparing to unpack .../10-libgit2-dev_0.28.4+dfsg.1-2_amd64.deb ... 2021-05-16T01:34:32.6963961Z Unpacking libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-05-16T01:34:32.8296445Z Setting up libgpg-error-dev (1.37-1) ... 2021-05-16T01:34:32.8346602Z Setting up libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T01:34:32.8397927Z Setting up libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-05-16T01:34:32.8433892Z Setting up libhttp-parser-dev (2.9.2-2) ... 2021-05-16T01:34:32.8478137Z Setting up libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T01:34:32.8523796Z Setting up libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T01:34:32.8570045Z Setting up libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-05-16T01:34:32.8617316Z Setting up libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-05-16T01:34:32.8692943Z Setting up libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-05-16T01:34:32.8740554Z Setting up libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-05-16T01:34:32.8788587Z Setting up libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-05-16T01:34:32.8825091Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:34:37.7386234Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-16T01:34:37.8551432Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:34:39.8608636Z Reading package lists... 2021-05-16T01:34:40.0063374Z Building dependency tree... 2021-05-16T01:34:40.0083398Z Reading state information... 2021-05-16T01:34:40.2441863Z libtiff-dev is already the newest version (4.1.0+git191117-2ubuntu0.20.04.1). 2021-05-16T01:34:40.2443226Z libtiff-dev set to manually installed. 2021-05-16T01:34:40.2444127Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:34:40.3082938Z Reading package lists... 2021-05-16T01:34:40.4568773Z Building dependency tree... 2021-05-16T01:34:40.4589516Z Reading state information... 2021-05-16T01:34:40.6769611Z unixodbc-dev is already the newest version (2.3.7). 2021-05-16T01:34:40.6770795Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:34:40.7389362Z Reading package lists... 2021-05-16T01:34:40.8806440Z Building dependency tree... 2021-05-16T01:34:40.8829232Z Reading state information... 2021-05-16T01:34:41.0739180Z The following NEW packages will be installed: 2021-05-16T01:34:41.0744637Z libsodium-dev 2021-05-16T01:34:41.0977835Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:34:41.0979768Z Need to get 169 kB of archives. 2021-05-16T01:34:41.0980866Z After this operation, 826 kB of additional disk space will be used. 2021-05-16T01:34:41.0982692Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsodium-dev amd64 1.0.18-1 [169 kB] 2021-05-16T01:34:41.5005991Z Fetched 169 kB in 0s (7726 kB/s) 2021-05-16T01:34:41.5336766Z Selecting previously unselected package libsodium-dev:amd64. 2021-05-16T01:34:41.5406954Z (Reading database ... 2021-05-16T01:34:41.5407667Z (Reading database ... 5% 2021-05-16T01:34:41.5408279Z (Reading database ... 10% 2021-05-16T01:34:41.5409072Z (Reading database ... 15% 2021-05-16T01:34:41.5409648Z (Reading database ... 20% 2021-05-16T01:34:41.5410238Z (Reading database ... 25% 2021-05-16T01:34:41.5410810Z (Reading database ... 30% 2021-05-16T01:34:41.5411391Z (Reading database ... 35% 2021-05-16T01:34:41.5411977Z (Reading database ... 40% 2021-05-16T01:34:41.5412542Z (Reading database ... 45% 2021-05-16T01:34:41.5413125Z (Reading database ... 50% 2021-05-16T01:34:41.5454235Z (Reading database ... 55% 2021-05-16T01:34:41.5497648Z (Reading database ... 60% 2021-05-16T01:34:41.5522230Z (Reading database ... 65% 2021-05-16T01:34:41.5637387Z (Reading database ... 70% 2021-05-16T01:34:41.5745580Z (Reading database ... 75% 2021-05-16T01:34:41.5770054Z (Reading database ... 80% 2021-05-16T01:34:41.6237340Z (Reading database ... 85% 2021-05-16T01:34:41.6394271Z (Reading database ... 90% 2021-05-16T01:34:41.6469093Z (Reading database ... 95% 2021-05-16T01:34:41.6470179Z (Reading database ... 100% 2021-05-16T01:34:41.6471654Z (Reading database ... 268550 files and directories currently installed.) 2021-05-16T01:34:41.6565091Z Preparing to unpack .../libsodium-dev_1.0.18-1_amd64.deb ... 2021-05-16T01:34:41.6578601Z Unpacking libsodium-dev:amd64 (1.0.18-1) ... 2021-05-16T01:34:41.7379678Z Setting up libsodium-dev:amd64 (1.0.18-1) ... 2021-05-16T01:34:43.7132043Z Reading package lists... 2021-05-16T01:34:43.8476512Z Building dependency tree... 2021-05-16T01:34:43.8494938Z Reading state information... 2021-05-16T01:34:43.9995672Z The following additional packages will be installed: 2021-05-16T01:34:44.0004158Z libarchive-dev liblept5 libtesseract4 tesseract-ocr tesseract-ocr-osd 2021-05-16T01:34:44.0494325Z The following NEW packages will be installed: 2021-05-16T01:34:44.0502368Z libarchive-dev liblept5 libleptonica-dev libtesseract-dev libtesseract4 2021-05-16T01:34:44.0505349Z tesseract-ocr tesseract-ocr-eng tesseract-ocr-osd 2021-05-16T01:34:44.0873388Z 0 upgraded, 8 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:34:44.0874438Z Need to get 10.4 MB of archives. 2021-05-16T01:34:44.0875333Z After this operation, 38.0 MB of additional disk space will be used. 2021-05-16T01:34:44.0877406Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-dev amd64 3.4.0-2ubuntu1 [490 kB] 2021-05-16T01:34:44.1334236Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblept5 amd64 1.79.0-1 [999 kB] 2021-05-16T01:34:44.1786165Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libleptonica-dev amd64 1.79.0-1 [1389 kB] 2021-05-16T01:34:44.2113079Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract4 amd64 4.1.1-2build2 [1237 kB] 2021-05-16T01:34:44.2269903Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract-dev amd64 4.1.1-2build2 [1463 kB] 2021-05-16T01:34:44.3142236Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-eng all 1:4.00~git30-7274cfa-1 [1598 kB] 2021-05-16T01:34:44.4711825Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-osd all 1:4.00~git30-7274cfa-1 [2990 kB] 2021-05-16T01:34:44.6506992Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr amd64 4.1.1-2build2 [262 kB] 2021-05-16T01:34:45.0907981Z Fetched 10.4 MB in 1s (17.2 MB/s) 2021-05-16T01:34:45.1208472Z Selecting previously unselected package libarchive-dev:amd64. 2021-05-16T01:34:45.1281720Z (Reading database ... 2021-05-16T01:34:45.1282507Z (Reading database ... 5% 2021-05-16T01:34:45.1283169Z (Reading database ... 10% 2021-05-16T01:34:45.1283830Z (Reading database ... 15% 2021-05-16T01:34:45.1284788Z (Reading database ... 20% 2021-05-16T01:34:45.1285503Z (Reading database ... 25% 2021-05-16T01:34:45.1286166Z (Reading database ... 30% 2021-05-16T01:34:45.1286809Z (Reading database ... 35% 2021-05-16T01:34:45.1287461Z (Reading database ... 40% 2021-05-16T01:34:45.1288097Z (Reading database ... 45% 2021-05-16T01:34:45.1288961Z (Reading database 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.../1-liblept5_1.79.0-1_amd64.deb ... 2021-05-16T01:34:45.3554558Z Unpacking liblept5:amd64 (1.79.0-1) ... 2021-05-16T01:34:45.4755479Z Selecting previously unselected package libleptonica-dev:amd64. 2021-05-16T01:34:45.4982074Z Preparing to unpack .../2-libleptonica-dev_1.79.0-1_amd64.deb ... 2021-05-16T01:34:45.5000953Z Unpacking libleptonica-dev:amd64 (1.79.0-1) ... 2021-05-16T01:34:45.6595491Z Selecting previously unselected package libtesseract4:amd64. 2021-05-16T01:34:45.6811188Z Preparing to unpack .../3-libtesseract4_4.1.1-2build2_amd64.deb ... 2021-05-16T01:34:45.6829382Z Unpacking libtesseract4:amd64 (4.1.1-2build2) ... 2021-05-16T01:34:45.8356056Z Selecting previously unselected package libtesseract-dev:amd64. 2021-05-16T01:34:45.8594744Z Preparing to unpack .../4-libtesseract-dev_4.1.1-2build2_amd64.deb ... 2021-05-16T01:34:45.8611436Z Unpacking libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-05-16T01:34:46.0396385Z Selecting previously unselected package tesseract-ocr-eng. 2021-05-16T01:34:46.0675373Z Preparing to unpack .../5-tesseract-ocr-eng_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-05-16T01:34:46.0709523Z Unpacking tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-05-16T01:34:46.2497496Z Selecting previously unselected package tesseract-ocr-osd. 2021-05-16T01:34:46.2779417Z Preparing to unpack .../6-tesseract-ocr-osd_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-05-16T01:34:46.2793462Z Unpacking tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-05-16T01:34:46.6395440Z Selecting previously unselected package tesseract-ocr. 2021-05-16T01:34:46.6670457Z Preparing to unpack .../7-tesseract-ocr_4.1.1-2build2_amd64.deb ... 2021-05-16T01:34:46.6680423Z Unpacking tesseract-ocr (4.1.1-2build2) ... 2021-05-16T01:34:46.7622564Z Setting up tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-05-16T01:34:46.7677326Z Setting up liblept5:amd64 (1.79.0-1) ... 2021-05-16T01:34:46.7705650Z Setting up libleptonica-dev:amd64 (1.79.0-1) ... 2021-05-16T01:34:46.7752394Z Setting up libtesseract4:amd64 (4.1.1-2build2) ... 2021-05-16T01:34:46.7793319Z Setting up libarchive-dev:amd64 (3.4.0-2ubuntu1) ... 2021-05-16T01:34:46.7819887Z Setting up tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-05-16T01:34:46.7854347Z Setting up libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-05-16T01:34:46.7886704Z Setting up tesseract-ocr (4.1.1-2build2) ... 2021-05-16T01:34:46.7925344Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:34:49.6809093Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:34:51.6904943Z Reading package lists... 2021-05-16T01:34:51.8471155Z Building dependency tree... 2021-05-16T01:34:51.8488083Z Reading state information... 2021-05-16T01:34:52.0673513Z wget is already the newest version (1.20.3-1ubuntu1). 2021-05-16T01:34:52.0675230Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:34:52.1337732Z Reading package lists... 2021-05-16T01:34:52.2866980Z Building dependency tree... 2021-05-16T01:34:52.2887411Z Reading state information... 2021-05-16T01:34:52.4464103Z The following additional packages will be installed: 2021-05-16T01:34:52.4467976Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-05-16T01:34:52.4471244Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev 2021-05-16T01:34:52.4474714Z Suggested packages: 2021-05-16T01:34:52.4476696Z doc-base krb5-doc krb5-user libnorm-doc 2021-05-16T01:34:52.4986258Z The following NEW packages will be installed: 2021-05-16T01:34:52.4989864Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-05-16T01:34:52.4994792Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev libzmq3-dev 2021-05-16T01:34:52.5195179Z 0 upgraded, 10 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:34:52.5196680Z Need to get 1459 kB of archives. 2021-05-16T01:34:52.5198308Z After this operation, 7754 kB of additional disk space will be used. 2021-05-16T01:34:52.5200558Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgssrpc4 amd64 1.17-6ubuntu4.1 [55.4 kB] 2021-05-16T01:34:52.5232216Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkdb5-9 amd64 1.17-6ubuntu4.1 [37.3 kB] 2021-05-16T01:34:52.5240614Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5srv-mit11 amd64 1.17-6ubuntu4.1 [49.5 kB] 2021-05-16T01:34:52.5248892Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5clnt-mit11 amd64 1.17-6ubuntu4.1 [37.6 kB] 2021-05-16T01:34:52.5256185Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 comerr-dev amd64 2.1-1.45.5-2ubuntu1 [39.9 kB] 2021-05-16T01:34:52.5263418Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 krb5-multidev amd64 1.17-6ubuntu4.1 [120 kB] 2021-05-16T01:34:52.5282587Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnorm-dev amd64 1.5.8+dfsg2-2build1 [463 kB] 2021-05-16T01:34:52.5345209Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpgm-dev amd64 5.2.122~dfsg-3ubuntu1 [189 kB] 2021-05-16T01:34:52.5365613Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkrb5-dev amd64 1.17-6ubuntu4.1 [11.7 kB] 2021-05-16T01:34:52.5372690Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzmq3-dev amd64 4.3.2-2ubuntu1 [455 kB] 2021-05-16T01:34:52.9469588Z Fetched 1459 kB in 0s (39.4 MB/s) 2021-05-16T01:34:52.9771324Z Selecting previously unselected package libgssrpc4:amd64. 2021-05-16T01:34:52.9847745Z (Reading database ... 2021-05-16T01:34:52.9848464Z (Reading database ... 5% 2021-05-16T01:34:52.9849165Z (Reading database ... 10% 2021-05-16T01:34:52.9849834Z (Reading database ... 15% 2021-05-16T01:34:52.9850469Z (Reading database ... 20% 2021-05-16T01:34:52.9851117Z (Reading database ... 25% 2021-05-16T01:34:52.9851775Z (Reading database ... 30% 2021-05-16T01:34:52.9852423Z (Reading database ... 35% 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2021-05-16T01:34:53.1476231Z Selecting previously unselected package libkdb5-9:amd64. 2021-05-16T01:34:53.1698494Z Preparing to unpack .../1-libkdb5-9_1.17-6ubuntu4.1_amd64.deb ... 2021-05-16T01:34:53.1716538Z Unpacking libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T01:34:53.2075965Z Selecting previously unselected package libkadm5srv-mit11:amd64. 2021-05-16T01:34:53.2286395Z Preparing to unpack .../2-libkadm5srv-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-05-16T01:34:53.2308235Z Unpacking libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T01:34:53.2675772Z Selecting previously unselected package libkadm5clnt-mit11:amd64. 2021-05-16T01:34:53.2901320Z Preparing to unpack .../3-libkadm5clnt-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-05-16T01:34:53.2920099Z Unpacking libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T01:34:53.3276554Z Selecting previously unselected package comerr-dev:amd64. 2021-05-16T01:34:53.3515597Z Preparing to unpack .../4-comerr-dev_2.1-1.45.5-2ubuntu1_amd64.deb ... 2021-05-16T01:34:53.3560099Z Unpacking comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-05-16T01:34:53.3955617Z Selecting previously unselected package krb5-multidev:amd64. 2021-05-16T01:34:53.4191919Z Preparing to unpack .../5-krb5-multidev_1.17-6ubuntu4.1_amd64.deb ... 2021-05-16T01:34:53.4203302Z Unpacking krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T01:34:53.4635859Z Selecting previously unselected package libnorm-dev:amd64. 2021-05-16T01:34:53.4858322Z Preparing to unpack .../6-libnorm-dev_1.5.8+dfsg2-2build1_amd64.deb ... 2021-05-16T01:34:53.4869696Z Unpacking libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-05-16T01:34:53.5717147Z Selecting previously unselected package libpgm-dev:amd64. 2021-05-16T01:34:53.5946759Z Preparing to unpack .../7-libpgm-dev_5.2.122~dfsg-3ubuntu1_amd64.deb ... 2021-05-16T01:34:53.5963713Z Unpacking libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-05-16T01:34:53.6475396Z Selecting previously unselected package libkrb5-dev:amd64. 2021-05-16T01:34:53.6710482Z Preparing to unpack .../8-libkrb5-dev_1.17-6ubuntu4.1_amd64.deb ... 2021-05-16T01:34:53.6722370Z Unpacking libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T01:34:53.6997006Z Selecting previously unselected package libzmq3-dev:amd64. 2021-05-16T01:34:53.7283258Z Preparing to unpack .../9-libzmq3-dev_4.3.2-2ubuntu1_amd64.deb ... 2021-05-16T01:34:53.7294279Z Unpacking libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-05-16T01:34:53.8419791Z Setting up libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-05-16T01:34:53.8459567Z Setting up libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T01:34:53.8502408Z Setting up libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-05-16T01:34:53.8535273Z Setting up comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-05-16T01:34:53.8587562Z Setting up libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T01:34:53.8624362Z Setting up libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T01:34:53.8657858Z Setting up libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T01:34:53.8698918Z Setting up krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T01:34:53.8733533Z Setting up libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-05-16T01:34:53.8758959Z Setting up libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-05-16T01:34:53.8800599Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:34:53.9016190Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:34:57.0450459Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-16T01:34:59.1217448Z Reading package lists... 2021-05-16T01:34:59.2686367Z Building dependency tree... 2021-05-16T01:34:59.2706644Z Reading state information... 2021-05-16T01:34:59.3881175Z E: Unable to locate package udunits 2021-05-16T01:34:59.4543983Z Reading package lists... 2021-05-16T01:34:59.6067664Z Building dependency tree... 2021-05-16T01:34:59.6086976Z Reading state information... 2021-05-16T01:34:59.7552640Z The following additional packages will be installed: 2021-05-16T01:34:59.7553796Z libwebpdemux2 2021-05-16T01:34:59.7989517Z The following NEW packages will be installed: 2021-05-16T01:34:59.7991385Z libwebp-dev libwebpdemux2 2021-05-16T01:34:59.8200062Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:34:59.8200800Z Need to get 277 kB of archives. 2021-05-16T01:34:59.8201550Z After this operation, 965 kB of additional disk space will be used. 2021-05-16T01:34:59.8203497Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwebpdemux2 amd64 0.6.1-2 [9472 B] 2021-05-16T01:34:59.8221116Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwebp-dev amd64 0.6.1-2 [267 kB] 2021-05-16T01:35:00.2386859Z Fetched 277 kB in 0s (10.8 MB/s) 2021-05-16T01:35:00.2728907Z Selecting previously unselected package libwebpdemux2:amd64. 2021-05-16T01:35:00.2810558Z (Reading database ... 2021-05-16T01:35:00.2811174Z (Reading database ... 5% 2021-05-16T01:35:00.2811722Z (Reading 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... 100% 2021-05-16T01:35:00.4066713Z (Reading database ... 269145 files and directories currently installed.) 2021-05-16T01:35:00.4181152Z Preparing to unpack .../libwebpdemux2_0.6.1-2_amd64.deb ... 2021-05-16T01:35:00.4217440Z Unpacking libwebpdemux2:amd64 (0.6.1-2) ... 2021-05-16T01:35:00.4556020Z Selecting previously unselected package libwebp-dev:amd64. 2021-05-16T01:35:00.4745952Z Preparing to unpack .../libwebp-dev_0.6.1-2_amd64.deb ... 2021-05-16T01:35:00.4758553Z Unpacking libwebp-dev:amd64 (0.6.1-2) ... 2021-05-16T01:35:00.5687245Z Setting up libwebpdemux2:amd64 (0.6.1-2) ... 2021-05-16T01:35:00.5716777Z Setting up libwebp-dev:amd64 (0.6.1-2) ... 2021-05-16T01:35:00.5754969Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:35:02.6425036Z Reading package lists... 2021-05-16T01:35:02.7997612Z Building dependency tree... 2021-05-16T01:35:02.8019072Z Reading state information... 2021-05-16T01:35:02.9526485Z The following additional packages will be installed: 2021-05-16T01:35:02.9529192Z gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-05-16T01:35:02.9536037Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-05-16T01:35:02.9538374Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-05-16T01:35:02.9539665Z Suggested packages: 2021-05-16T01:35:02.9541241Z cargo-doc gdb-doc gdbserver rust-doc rust-src 2021-05-16T01:35:02.9542433Z Recommended packages: 2021-05-16T01:35:02.9543271Z cargo 2021-05-16T01:35:03.0022902Z The following NEW packages will be installed: 2021-05-16T01:35:03.0027675Z cargo gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-05-16T01:35:03.0029149Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-05-16T01:35:03.0030988Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-05-16T01:35:03.0270050Z 0 upgraded, 13 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:35:03.0270815Z Need to get 108 MB of archives. 2021-05-16T01:35:03.0271572Z After this operation, 501 MB of additional disk space will be used. 2021-05-16T01:35:03.0273450Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libbabeltrace1 amd64 1.5.8-1build1 [156 kB] 2021-05-16T01:35:03.0319345Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libipt2 amd64 2.0.1-1 [42.8 kB] 2021-05-16T01:35:03.0328722Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight-common all 3.1.8-1.2build5 [50.7 kB] 2021-05-16T01:35:03.0340809Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libboost-regex1.71.0 amd64 1.71.0-6ubuntu6 [471 kB] 2021-05-16T01:35:03.0404814Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight4v5 amd64 3.1.8-1.2build5 [232 kB] 2021-05-16T01:35:03.0431659Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxxhash0 amd64 0.7.3-1 [15.3 kB] 2021-05-16T01:35:03.0554383Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-1.47 amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [59.6 MB] 2021-05-16T01:35:03.1814383Z Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal/main amd64 gdb amd64 10.2-0ubuntu1~20.04~1 [3282 kB] 2021-05-16T01:35:05.3920343Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-dev amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [28.5 MB] 2021-05-16T01:35:06.4004128Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rustc amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [1921 kB] 2021-05-16T01:35:06.4656805Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 cargo amd64 0.47.0-1~exp1ubuntu1~20.04.1 [3147 kB] 2021-05-16T01:35:06.5820310Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libc6-dbg amd64 2.31-0ubuntu9.2 [10.5 MB] 2021-05-16T01:35:06.6848732Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rust-gdb all 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [27.5 kB] 2021-05-16T01:35:07.1027178Z Fetched 108 MB in 4s (29.3 MB/s) 2021-05-16T01:35:07.1324383Z Selecting previously unselected package libbabeltrace1:amd64. 2021-05-16T01:35:07.1399679Z (Reading database ... 2021-05-16T01:35:07.1400265Z (Reading database ... 5% 2021-05-16T01:35:07.1400763Z (Reading database ... 10% 2021-05-16T01:35:07.1401271Z (Reading database ... 15% 2021-05-16T01:35:07.1402261Z (Reading database ... 20% 2021-05-16T01:35:07.1402773Z (Reading database ... 25% 2021-05-16T01:35:07.1403294Z (Reading database ... 30% 2021-05-16T01:35:07.1403794Z (Reading database ... 35% 2021-05-16T01:35:07.1404287Z (Reading database ... 40% 2021-05-16T01:35:07.1404774Z (Reading database ... 45% 2021-05-16T01:35:07.1405271Z (Reading database ... 50% 2021-05-16T01:35:07.1430197Z (Reading database ... 55% 2021-05-16T01:35:07.1471381Z (Reading database ... 60% 2021-05-16T01:35:07.1501296Z (Reading database ... 65% 2021-05-16T01:35:07.1622118Z (Reading database ... 70% 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.../02-libsource-highlight-common_3.1.8-1.2build5_all.deb ... 2021-05-16T01:35:07.3884003Z Unpacking libsource-highlight-common (3.1.8-1.2build5) ... 2021-05-16T01:35:07.4395158Z Selecting previously unselected package libboost-regex1.71.0:amd64. 2021-05-16T01:35:07.4600514Z Preparing to unpack .../03-libboost-regex1.71.0_1.71.0-6ubuntu6_amd64.deb ... 2021-05-16T01:35:07.4613083Z Unpacking libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-05-16T01:35:07.5395883Z Selecting previously unselected package libsource-highlight4v5. 2021-05-16T01:35:07.5616295Z Preparing to unpack .../04-libsource-highlight4v5_3.1.8-1.2build5_amd64.deb ... 2021-05-16T01:35:07.5639244Z Unpacking libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-05-16T01:35:07.6192432Z Selecting previously unselected package libxxhash0:amd64. 2021-05-16T01:35:07.6387894Z Preparing to unpack .../05-libxxhash0_0.7.3-1_amd64.deb ... 2021-05-16T01:35:07.6407486Z Unpacking libxxhash0:amd64 (0.7.3-1) ... 2021-05-16T01:35:07.6726468Z Selecting previously unselected package gdb. 2021-05-16T01:35:07.6967828Z Preparing to unpack .../06-gdb_10.2-0ubuntu1~20.04~1_amd64.deb ... 2021-05-16T01:35:07.6984601Z Unpacking gdb (10.2-0ubuntu1~20.04~1) ... 2021-05-16T01:35:08.0133915Z Selecting previously unselected package libstd-rust-1.47:amd64. 2021-05-16T01:35:08.0419232Z Preparing to unpack .../07-libstd-rust-1.47_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-05-16T01:35:08.0432498Z Unpacking libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T01:35:14.3214889Z Selecting previously unselected package libstd-rust-dev:amd64. 2021-05-16T01:35:14.3481757Z Preparing to unpack .../08-libstd-rust-dev_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-05-16T01:35:14.3494445Z Unpacking libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T01:35:17.3595334Z Selecting previously unselected package rustc. 2021-05-16T01:35:17.3853412Z Preparing to unpack .../09-rustc_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-05-16T01:35:17.3869711Z Unpacking rustc (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T01:35:17.5740290Z Selecting previously unselected package cargo. 2021-05-16T01:35:17.6015573Z Preparing to unpack .../10-cargo_0.47.0-1~exp1ubuntu1~20.04.1_amd64.deb ... 2021-05-16T01:35:17.6029088Z Unpacking cargo (0.47.0-1~exp1ubuntu1~20.04.1) ... 2021-05-16T01:35:17.9475469Z Selecting previously unselected package libc6-dbg:amd64. 2021-05-16T01:35:17.9676069Z Preparing to unpack .../11-libc6-dbg_2.31-0ubuntu9.2_amd64.deb ... 2021-05-16T01:35:17.9690320Z Unpacking libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-05-16T01:35:19.1297939Z Selecting previously unselected package rust-gdb. 2021-05-16T01:35:19.1596374Z Preparing to unpack .../12-rust-gdb_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_all.deb ... 2021-05-16T01:35:19.1608842Z Unpacking rust-gdb (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T01:35:19.2283014Z Setting up libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T01:35:19.2332280Z Setting up libsource-highlight-common (3.1.8-1.2build5) ... 2021-05-16T01:35:19.2372416Z Setting up libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-05-16T01:35:19.2421464Z Setting up libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T01:35:19.2447501Z Setting up libipt2 (2.0.1-1) ... 2021-05-16T01:35:19.2493761Z Setting up libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-05-16T01:35:19.2525484Z Setting up libbabeltrace1:amd64 (1.5.8-1build1) ... 2021-05-16T01:35:19.2574814Z Setting up rustc (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T01:35:19.2613281Z Setting up libxxhash0:amd64 (0.7.3-1) ... 2021-05-16T01:35:19.2648776Z Setting up libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-05-16T01:35:19.2681113Z Setting up cargo (0.47.0-1~exp1ubuntu1~20.04.1) ... 2021-05-16T01:35:19.2719551Z Setting up gdb (10.2-0ubuntu1~20.04~1) ... 2021-05-16T01:35:19.2758821Z Setting up rust-gdb (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-16T01:35:19.2795502Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:35:19.3010101Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:35:22.5098589Z Reading package lists... 2021-05-16T01:35:22.6632548Z Building dependency tree... 2021-05-16T01:35:22.6651615Z Reading state information... 2021-05-16T01:35:22.8155436Z The following additional packages will be installed: 2021-05-16T01:35:22.8158866Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-05-16T01:35:22.8161998Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-05-16T01:35:22.8164946Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-05-16T01:35:22.8168177Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-05-16T01:35:22.8171046Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-05-16T01:35:22.8173757Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-05-16T01:35:22.8176308Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-05-16T01:35:22.8179180Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-05-16T01:35:22.8182103Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-05-16T01:35:22.8185142Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-05-16T01:35:22.8188091Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-05-16T01:35:22.8191025Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-05-16T01:35:22.8194503Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-05-16T01:35:22.8196559Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-05-16T01:35:22.8198368Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-05-16T01:35:22.8200069Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-05-16T01:35:22.8201738Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-05-16T01:35:22.8205461Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-05-16T01:35:22.8207087Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-05-16T01:35:22.8208367Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-05-16T01:35:22.8209843Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-05-16T01:35:22.8211171Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-05-16T01:35:22.8212428Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-05-16T01:35:22.8213612Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-05-16T01:35:22.8214827Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-05-16T01:35:22.8216288Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-05-16T01:35:22.8217749Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-05-16T01:35:22.8219250Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-05-16T01:35:22.8220791Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-05-16T01:35:22.8222210Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-05-16T01:35:22.8223567Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-05-16T01:35:22.8224876Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-05-16T01:35:22.8226303Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-05-16T01:35:22.8227760Z python3-cycler python3-dateutil python3-decorator python3-future 2021-05-16T01:35:22.8229348Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-05-16T01:35:22.8230968Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-05-16T01:35:22.8232324Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-05-16T01:35:22.8233770Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-05-16T01:35:22.8235059Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-05-16T01:35:22.8236453Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-05-16T01:35:22.8237863Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-05-16T01:35:22.8239139Z python3-webencodings qdoc-qt5 qgis-common qgis-plugin-grass 2021-05-16T01:35:22.8240440Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-05-16T01:35:22.8241956Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-05-16T01:35:22.8243750Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-05-16T01:35:22.8245103Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-05-16T01:35:22.8246440Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-05-16T01:35:22.8247907Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-05-16T01:35:22.8249124Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-05-16T01:35:22.8249839Z Suggested packages: 2021-05-16T01:35:22.8250853Z avahi-autoipd blt-demo libgdal-grass grass-dev grass-gui e00compr avce00 2021-05-16T01:35:22.8252113Z gnuplot gpsbabel gpstrans netpbm python3-rpy2 python3-termcolor grass 2021-05-16T01:35:22.8253526Z grass-dev-doc gvfs exiv2 geotiff-bin libgeotiff-epsg libvisual-0.4-plugins 2021-05-16T01:35:22.8254950Z libhdf4-doc libhdf4-alt-dev hdf4-tools libjs-jquery-ui-docs avahi-autoipd 2021-05-16T01:35:22.8256169Z | zeroconf ogdi-bin pcscd libqscintilla2-doc qtwayland5 2021-05-16T01:35:22.8257462Z qt5-qmltooling-plugins pinentry-doc python-cycler-doc python-future-doc 2021-05-16T01:35:22.8258863Z python3-genshi python3-lxml-dbg python-lxml-doc dvipng gir1.2-gtk-3.0 2021-05-16T01:35:22.8260248Z inkscape ipython3 python-matplotlib-doc python3-cairocffi python3-gi-cairo 2021-05-16T01:35:22.8261604Z python3-gobject python3-nose python3-scipy python3-tornado 2021-05-16T01:35:22.8262998Z texlive-extra-utils texlive-latex-extra ttf-staypuft python-numpy-doc 2021-05-16T01:35:22.8264269Z python3-pytest python3-numpy-dbg owslib-doc python-pil-doc python3-pil-dbg 2021-05-16T01:35:22.8265576Z python3-pandas python3-ipykernel python-psycopg2-doc python-pyparsing-doc 2021-05-16T01:35:22.8266774Z python3-pyqt5-dbg otb-qgis saga tix python3-tk-dbg qt5-doc comgt wvdial 2021-05-16T01:35:22.8267675Z wpagui libengine-pkcs11-openssl 2021-05-16T01:35:22.9004449Z The following NEW packages will be installed: 2021-05-16T01:35:22.9008792Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-05-16T01:35:22.9011453Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-05-16T01:35:22.9013884Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-05-16T01:35:22.9016143Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-05-16T01:35:22.9017189Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-05-16T01:35:22.9019627Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-05-16T01:35:22.9020717Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-05-16T01:35:22.9023676Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-05-16T01:35:22.9024945Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-05-16T01:35:22.9029165Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-05-16T01:35:22.9032451Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-05-16T01:35:22.9037563Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-05-16T01:35:22.9040794Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-05-16T01:35:22.9044143Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-05-16T01:35:22.9047453Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-05-16T01:35:22.9050500Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-05-16T01:35:22.9053425Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-05-16T01:35:22.9056387Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-05-16T01:35:22.9059462Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-05-16T01:35:22.9061931Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-05-16T01:35:22.9064316Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-05-16T01:35:22.9067246Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-05-16T01:35:22.9072311Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-05-16T01:35:22.9074906Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-05-16T01:35:22.9077060Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-05-16T01:35:22.9079788Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-05-16T01:35:22.9082384Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-05-16T01:35:22.9085086Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-05-16T01:35:22.9088041Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-05-16T01:35:22.9090576Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-05-16T01:35:22.9092966Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-05-16T01:35:22.9095297Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-05-16T01:35:22.9097838Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-05-16T01:35:22.9100431Z python3-cycler python3-dateutil python3-decorator python3-future 2021-05-16T01:35:22.9103255Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-05-16T01:35:22.9106081Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-05-16T01:35:22.9108684Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-05-16T01:35:22.9111350Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-05-16T01:35:22.9112627Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-05-16T01:35:22.9114805Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-05-16T01:35:22.9116238Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-05-16T01:35:22.9117542Z python3-webencodings qdoc-qt5 qgis qgis-common qgis-plugin-grass 2021-05-16T01:35:22.9118863Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-05-16T01:35:22.9120395Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-05-16T01:35:22.9121981Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-05-16T01:35:22.9123353Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-05-16T01:35:22.9124698Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-05-16T01:35:22.9126149Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-05-16T01:35:22.9127388Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-05-16T01:35:22.9273117Z 0 upgraded, 214 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:35:22.9274073Z Need to get 183 MB of archives. 2021-05-16T01:35:22.9274841Z After this operation, 776 MB of additional disk space will be used. 2021-05-16T01:35:22.9276776Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdouble-conversion3 amd64 3.1.5-4ubuntu1 [37.9 kB] 2021-05-16T01:35:22.9309245Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5core5a amd64 5.12.8+dfsg-0ubuntu1 [2005 kB] 2021-05-16T01:35:22.9599408Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl-mesa0 amd64 20.2.6-0ubuntu0.20.04.1 [97.7 kB] 2021-05-16T01:35:22.9616268Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl1 amd64 1.3.2-1~ubuntu0.20.04.1 [31.9 kB] 2021-05-16T01:35:22.9625870Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libevdev2 amd64 1.9.0+dfsg-1ubuntu0.1 [31.6 kB] 2021-05-16T01:35:22.9631847Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmtdev1 amd64 1.1.5-1.1 [14.2 kB] 2021-05-16T01:35:22.9640733Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-common all 1.3-2ubuntu3 [45.3 kB] 2021-05-16T01:35:22.9648785Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom2 amd64 1.3-2ubuntu3 [20.0 kB] 2021-05-16T01:35:22.9656124Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput-bin amd64 1.15.5-1ubuntu0.2 [19.1 kB] 2021-05-16T01:35:22.9661930Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput10 amd64 1.15.5-1ubuntu0.2 [112 kB] 2021-05-16T01:35:22.9683823Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5dbus5 amd64 5.12.8+dfsg-0ubuntu1 [208 kB] 2021-05-16T01:35:22.9711654Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5network5 amd64 5.12.8+dfsg-0ubuntu1 [674 kB] 2021-05-16T01:35:22.9777055Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [10.8 kB] 2021-05-16T01:35:22.9779039Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-util1 amd64 0.4.0-0ubuntu3 [11.2 kB] 2021-05-16T01:35:22.9785049Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-image0 amd64 0.4.0-1build1 [12.3 kB] 2021-05-16T01:35:22.9794621Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-keysyms1 amd64 0.4.0-1build1 [8452 B] 2021-05-16T01:35:22.9796669Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-randr0 amd64 1.14-2 [16.3 kB] 2021-05-16T01:35:22.9802360Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-render-util0 amd64 0.3.9-1build1 [9912 B] 2021-05-16T01:35:22.9807880Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinerama0 amd64 1.14-2 [5260 B] 2021-05-16T01:35:22.9815400Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinput0 amd64 1.14-2 [29.3 kB] 2021-05-16T01:35:22.9820795Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xkb1 amd64 1.14-2 [29.6 kB] 2021-05-16T01:35:22.9828765Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxkbcommon-x11-0 amd64 0.10.0-1 [13.4 kB] 2021-05-16T01:35:22.9835280Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5gui5 amd64 5.12.8+dfsg-0ubuntu1 [2971 kB] 2021-05-16T01:35:23.0107636Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5widgets5 amd64 5.12.8+dfsg-0ubuntu1 [2293 kB] 2021-05-16T01:35:23.0317771Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5svg5 amd64 5.12.8-0ubuntu1 [131 kB] 2021-05-16T01:35:23.0334260Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liborc-0.4-0 amd64 1:0.4.31-1 [188 kB] 2021-05-16T01:35:23.0355289Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgstreamer-plugins-base1.0-0 amd64 1.16.2-4 [735 kB] 2021-05-16T01:35:23.0423952Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhyphen0 amd64 2.8.8-7 [27.0 kB] 2021-05-16T01:35:23.0433324Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5positioning5 amd64 5.12.8+dfsg-0ubuntu1 [197 kB] 2021-05-16T01:35:23.0454032Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5printsupport5 amd64 5.12.8+dfsg-0ubuntu1 [193 kB] 2021-05-16T01:35:23.0476011Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5qml5 amd64 5.12.8-0ubuntu1 [1438 kB] 2021-05-16T01:35:23.0609033Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quick5 amd64 5.12.8-0ubuntu1 [1335 kB] 2021-05-16T01:35:23.0736331Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sensors5 amd64 5.12.8-0ubuntu1 [114 kB] 2021-05-16T01:35:23.0752181Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webchannel5 amd64 5.12.8-0ubuntu1 [51.2 kB] 2021-05-16T01:35:23.0760472Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwoff1 amd64 1.0.2-1build2 [42.0 kB] 2021-05-16T01:35:23.0768717Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webkit5 amd64 5.212.0~alpha4-1ubuntu2 [12.1 MB] 2021-05-16T01:35:23.2809610Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-image-formats-plugins amd64 5.12.8-0ubuntu1 [43.4 kB] 2021-05-16T01:35:23.2817905Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers-common all 3.10.4+dfsg-1ubuntu2 [897 kB] 2021-05-16T01:35:23.2896217Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2 amd64 2.2.1-2build1 [307 kB] 2021-05-16T01:35:23.2925029Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2-plugins amd64 2.2.1-2build1 [191 kB] 2021-05-16T01:35:23.2944806Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5 amd64 5.12.8+dfsg-0ubuntu1 [121 kB] 2021-05-16T01:35:23.2957686Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5-sqlite amd64 5.12.8+dfsg-0ubuntu1 [47.5 kB] 2021-05-16T01:35:23.2964573Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-data all 3.0.4+dfsg-1build3 [186 kB] 2021-05-16T01:35:23.2982519Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarpack2 amd64 3.7.0-3 [92.8 kB] 2021-05-16T01:35:23.2994431Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsuperlu5 amd64 5.2.1+dfsg1-4 [159 kB] 2021-05-16T01:35:23.3010712Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarmadillo9 amd64 1:9.800.4+dfsg-1build1 [93.2 kB] 2021-05-16T01:35:23.3021756Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcfitsio8 amd64 3.470-3 [466 kB] 2021-05-16T01:35:23.3065403Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcharls2 amd64 2.0.0+dfsg-1build1 [74.1 kB] 2021-05-16T01:35:23.3073953Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdap25 amd64 3.20.5-1 [435 kB] 2021-05-16T01:35:23.3113272Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdapclient6v5 amd64 3.20.5-1 [92.2 kB] 2021-05-16T01:35:23.3124012Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libepsilon1 amd64 0.9.2+dfsg-4 [41.0 kB] 2021-05-16T01:35:23.3130253Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfreexl1 amd64 1.0.5-3 [33.4 kB] 2021-05-16T01:35:23.3137272Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfyba0 amd64 4.1.1-6build1 [113 kB] 2021-05-16T01:35:23.3150298Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-3.8.0 amd64 3.8.0-1build1 [535 kB] 2021-05-16T01:35:23.3199165Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-c1v5 amd64 3.8.0-1build1 [69.9 kB] 2021-05-16T01:35:23.3208491Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-data all 6.3.1-1 [7647 kB] 2021-05-16T01:35:23.4278426Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libproj15 amd64 6.3.1-1 [925 kB] 2021-05-16T01:35:23.4358480Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeotiff5 amd64 1.5.1-2 [53.1 kB] 2021-05-16T01:35:23.4366028Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf4-0-alt amd64 4.2.14-1ubuntu1 [268 kB] 2021-05-16T01:35:23.4394143Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libminizip1 amd64 1.1-8build1 [20.2 kB] 2021-05-16T01:35:23.4399660Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liburiparser1 amd64 0.9.3-2 [39.3 kB] 2021-05-16T01:35:23.4405435Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlbase1 amd64 1.3.0-8build1 [45.4 kB] 2021-05-16T01:35:23.4408309Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmldom1 amd64 1.3.0-8build1 [152 kB] 2021-05-16T01:35:23.4422793Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlengine1 amd64 1.3.0-8build1 [72.5 kB] 2021-05-16T01:35:23.4430888Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnetcdf15 amd64 1:4.7.3-1 [341 kB] 2021-05-16T01:35:23.4460341Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libogdi4.1 amd64 4.1.0+ds-1build1 [198 kB] 2021-05-16T01:35:23.4480301Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqhull7 amd64 2015.2-4 [152 kB] 2021-05-16T01:35:23.4494976Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialite7 amd64 4.3.0a-6build1 [1286 kB] 2021-05-16T01:35:23.4586597Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxerces-c3.2 amd64 3.2.2+debian-1build3 [878 kB] 2021-05-16T01:35:23.4656292Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgdal26 amd64 3.0.4+dfsg-1build3 [6156 kB] 2021-05-16T01:35:23.5491864Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5concurrent5 amd64 5.12.8+dfsg-0ubuntu1 [33.5 kB] 2021-05-16T01:35:23.5498241Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5keychain1 amd64 0.10.0-1build1 [48.4 kB] 2021-05-16T01:35:23.5504374Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5serialport5 amd64 5.12.8-0ubuntu1 [33.1 kB] 2021-05-16T01:35:23.5507225Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5xml5 amd64 5.12.8+dfsg-0ubuntu1 [105 kB] 2021-05-16T01:35:23.5516713Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialindex6 amd64 1.9.3-1build1 [266 kB] 2021-05-16T01:35:23.5545049Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzip5 amd64 1.5.1-0ubuntu1 [46.7 kB] 2021-05-16T01:35:23.5547692Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-core3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [5216 kB] 2021-05-16T01:35:23.6499754Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-native3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [44.5 kB] 2021-05-16T01:35:23.6509359Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-l10n all 2.11.2+dfsg-6 [41.3 kB] 2021-05-16T01:35:23.6521390Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-15 amd64 2.11.2+dfsg-6 [1238 kB] 2021-05-16T01:35:23.6615582Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quickwidgets5 amd64 5.12.8-0ubuntu1 [39.8 kB] 2021-05-16T01:35:23.6625340Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5opengl5 amd64 5.12.8+dfsg-0ubuntu1 [136 kB] 2021-05-16T01:35:23.6641539Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqwt-qt5-6 amd64 6.1.4-1.1build1 [427 kB] 2021-05-16T01:35:23.6680706Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-gui3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3195 kB] 2021-05-16T01:35:23.6923743Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers amd64 3.10.4+dfsg-1ubuntu2 [1940 kB] 2021-05-16T01:35:23.7082942Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-core7 amd64 0.7-4ubuntu7 [81.7 kB] 2021-05-16T01:35:23.7092126Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdaemon0 amd64 0.14-7 [13.9 kB] 2021-05-16T01:35:23.7098808Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 avahi-daemon amd64 0.7-4ubuntu7 [61.0 kB] 2021-05-16T01:35:23.7102593Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4 [572 kB] 2021-05-16T01:35:23.7149191Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 blt amd64 2.5.3+dfsg-4 [4944 B] 2021-05-16T01:35:23.7153938Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 fonts-lyx all 2.3.4.2-2 [154 kB] 2021-05-16T01:35:23.7168246Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgck-1-0 amd64 3.36.0-2build1 [75.5 kB] 2021-05-16T01:35:23.7178935Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-base-3-1 amd64 3.36.0-2build1 [193 kB] 2021-05-16T01:35:23.7197320Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-ui-3-1 amd64 3.36.0-2build1 [127 kB] 2021-05-16T01:35:23.7210402Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gcr amd64 3.36.0-2build1 [63.9 kB] 2021-05-16T01:35:23.7217912Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-numpy amd64 1:1.17.4-5ubuntu3 [2725 kB] 2021-05-16T01:35:23.7552084Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-gdal amd64 3.0.4+dfsg-1build3 [527 kB] 2021-05-16T01:35:23.7594673Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-bin amd64 3.0.4+dfsg-1build3 [256 kB] 2021-05-16T01:35:23.7620403Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-glib1 amd64 0.7-4ubuntu7 [7804 B] 2021-05-16T01:35:23.7622761Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmm-glib0 amd64 1.12.8-1 [185 kB] 2021-05-16T01:35:23.7636955Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 geoclue-2.0 amd64 2.5.6-0ubuntu1 [91.9 kB] 2021-05-16T01:35:23.7681759Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit-modules amd64 0.23.20-1ubuntu0.1 [231 kB] 2021-05-16T01:35:23.7753383Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit amd64 0.23.20-1ubuntu0.1 [93.8 kB] 2021-05-16T01:35:23.7764123Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 pinentry-gnome3 amd64 1.1.0-3build1 [38.6 kB] 2021-05-16T01:35:23.7770439Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring amd64 3.36.0-1ubuntu1 [613 kB] 2021-05-16T01:35:23.7830658Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring-pkcs11 amd64 3.36.0-1ubuntu1 [28.0 kB] 2021-05-16T01:35:23.7837302Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-doc all 7.8.2-1build3 [32.4 MB] 2021-05-16T01:35:24.3174039Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblaszip8 amd64 3.4.3-1build1 [125 kB] 2021-05-16T01:35:24.3186885Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-util9 amd64 2.0.1+ds-1build3 [68.5 kB] 2021-05-16T01:35:24.3195043Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-base9 amd64 2.0.1+ds-1build3 [1739 kB] 2021-05-16T01:35:24.4182564Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-core amd64 7.8.2-1build3 [5737 kB] 2021-05-16T01:35:24.4626858Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdparanoia0 amd64 3.10.2+debian-13 [46.7 kB] 2021-05-16T01:35:24.4634145Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvisual-0.4-0 amd64 0.4.0-17 [99.8 kB] 2021-05-16T01:35:24.4643829Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gstreamer1.0-plugins-base amd64 1.16.2-4 [619 kB] 2021-05-16T01:35:24.4701258Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 iio-sensor-proxy amd64 2.8-1ubuntu1 [35.8 kB] 2021-05-16T01:35:24.4703722Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libassimp5 amd64 5.0.1~ds0-1build1 [2775 kB] 2021-05-16T01:35:24.4945220Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libexiv2-27 amd64 0.27.2-8ubuntu2.2 [788 kB] 2021-05-16T01:35:24.5031460Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi0ldbl amd64 2.4.0-10build1 [155 kB] 2021-05-16T01:35:24.5048691Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi-bin amd64 2.4.0-10build1 [10.5 kB] 2021-05-16T01:35:24.5054010Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimagequant0 amd64 2.12.2-1.1 [31.4 kB] 2021-05-16T01:35:24.5056214Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] 2021-05-16T01:35:24.5077314Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-glib4 amd64 1.22.0-2 [101 kB] 2021-05-16T01:35:24.5093867Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-proxy amd64 1.22.0-2 [5908 B] 2021-05-16T01:35:24.5095803Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-genl-3-200 amd64 3.4.0-1 [11.1 kB] 2021-05-16T01:35:24.5098790Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-route-3-200 amd64 3.4.0-1 [149 kB] 2021-05-16T01:35:24.5120346Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnss-mdns amd64 0.14.1-1ubuntu1 [22.9 kB] 2021-05-16T01:35:24.5126823Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpam-gnome-keyring amd64 3.36.0-1ubuntu1 [23.3 kB] 2021-05-16T01:35:24.5132581Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpcsclite1 amd64 1.8.26-3 [22.0 kB] 2021-05-16T01:35:24.5135408Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-faux amd64 2.0.1+ds-1build3 [27.3 kB] 2021-05-16T01:35:24.5141723Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-icebridge amd64 2.0.1+ds-1build3 [42.8 kB] 2021-05-16T01:35:24.5145085Z Get:131 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-pgpointcloud amd64 2.0.1+ds-1build3 [75.3 kB] 2021-05-16T01:35:24.5148158Z Get:132 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-python amd64 2.0.1+ds-1build3 [136 kB] 2021-05-16T01:35:24.5157177Z Get:133 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsqlite3-mod-spatialite amd64 4.3.0a-6build1 [1265 kB] 2021-05-16T01:35:24.5261424Z Get:134 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-sqlite amd64 2.0.1+ds-1build3 [89.5 kB] 2021-05-16T01:35:24.5276141Z Get:135 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugins amd64 2.0.1+ds-1build3 [12.9 kB] 2021-05-16T01:35:24.5279025Z Get:136 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dcore5 amd64 5.12.8+dfsg-0ubuntu1 [137 kB] 2021-05-16T01:35:24.5289198Z Get:137 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53drender5 amd64 5.12.8+dfsg-0ubuntu1 [689 kB] 2021-05-16T01:35:24.5342330Z Get:138 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53danimation5 amd64 5.12.8+dfsg-0ubuntu1 [159 kB] 2021-05-16T01:35:24.5359915Z Get:139 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dinput5 amd64 5.12.8+dfsg-0ubuntu1 [125 kB] 2021-05-16T01:35:24.5375285Z Get:140 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dlogic5 amd64 5.12.8+dfsg-0ubuntu1 [25.9 kB] 2021-05-16T01:35:24.5377578Z Get:141 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dextras5 amd64 5.12.8+dfsg-0ubuntu1 [157 kB] 2021-05-16T01:35:24.5396995Z Get:142 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-assimpsceneimport-plugin amd64 5.12.8+dfsg-0ubuntu1 [45.2 kB] 2021-05-16T01:35:24.5403444Z Get:143 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-defaultgeometryloader-plugin amd64 5.12.8+dfsg-0ubuntu1 [33.3 kB] 2021-05-16T01:35:24.5406416Z Get:144 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-gltfsceneio-plugin amd64 5.12.8+dfsg-0ubuntu1 [110 kB] 2021-05-16T01:35:24.5418040Z Get:145 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dquickscene2d5 amd64 5.12.8+dfsg-0ubuntu1 [38.4 kB] 2021-05-16T01:35:24.5425187Z Get:146 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-scene2d-plugin amd64 5.12.8+dfsg-0ubuntu1 [17.1 kB] 2021-05-16T01:35:24.5428152Z Get:147 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-3d3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [224 kB] 2021-05-16T01:35:24.5447494Z Get:148 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-analysis3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [927 kB] 2021-05-16T01:35:24.5523698Z Get:149 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-app3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3060 kB] 2021-05-16T01:35:24.5767051Z Get:150 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtchooser amd64 66-2build1 [24.7 kB] 2021-05-16T01:35:24.5771812Z Get:151 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qdoc-qt5 amd64 5.12.8-0ubuntu1 [507 kB] 2021-05-16T01:35:24.5816010Z Get:152 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5help5 amd64 5.12.8-0ubuntu1 [134 kB] 2021-05-16T01:35:24.5830311Z Get:153 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qhelpgenerator-qt5 amd64 5.12.8-0ubuntu1 [64.3 kB] 2021-05-16T01:35:24.5835579Z Get:154 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-assistant amd64 5.12.8-0ubuntu1 [369 kB] 2021-05-16T01:35:24.5871427Z Get:155 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtattributionsscanner-qt5 amd64 5.12.8-0ubuntu1 [26.0 kB] 2021-05-16T01:35:24.5876724Z Get:156 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designer5 amd64 5.12.8-0ubuntu1 [2778 kB] 2021-05-16T01:35:24.6119774Z Get:157 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designercomponents5 amd64 5.12.8-0ubuntu1 [718 kB] 2021-05-16T01:35:24.6177477Z Get:158 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttools5-dev-tools amd64 5.12.8-0ubuntu1 [1031 kB] 2021-05-16T01:35:24.6330137Z Get:159 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-customwidgets amd64 3.10.4+dfsg-1ubuntu2 [3397 kB] 2021-05-16T01:35:24.6606725Z Get:160 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-server3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [311 kB] 2021-05-16T01:35:24.6636004Z Get:161 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgisgrass7-3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [228 kB] 2021-05-16T01:35:24.6657617Z Get:162 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgispython3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [43.1 kB] 2021-05-16T01:35:24.6662247Z Get:163 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-glib5 amd64 1.24.8-1 [529 kB] 2021-05-16T01:35:24.6710911Z Get:164 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-proxy amd64 1.24.8-1 [5856 B] 2021-05-16T01:35:24.6713391Z Get:165 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5test5 amd64 5.12.8+dfsg-0ubuntu1 [131 kB] 2021-05-16T01:35:24.6727831Z Get:166 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-bin amd64 1.3-2ubuntu3 [5484 B] 2021-05-16T01:35:24.6729811Z Get:167 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 modemmanager amd64 1.12.8-1 [755 kB] 2021-05-16T01:35:24.6788741Z Get:168 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 ttf-bitstream-vera all 1.10-8 [352 kB] 2021-05-16T01:35:24.6820005Z Get:169 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python-matplotlib-data all 3.1.2-1ubuntu4 [3788 kB] 2021-05-16T01:35:24.7115429Z Get:170 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-soupsieve all 1.9.5+dfsg-1 [29.1 kB] 2021-05-16T01:35:24.7117537Z Get:171 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-bs4 all 4.8.2-1 [83.0 kB] 2021-05-16T01:35:24.7130047Z Get:172 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-cycler all 0.10.0-3 [8132 B] 2021-05-16T01:35:24.7139169Z Get:173 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-dateutil all 2.7.3-3ubuntu1 [63.3 kB] 2021-05-16T01:35:24.7141938Z Get:174 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-decorator all 4.4.2-0ubuntu1 [10.3 kB] 2021-05-16T01:35:24.7143882Z Get:175 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-future all 0.18.2-2 [336 kB] 2021-05-16T01:35:24.7171781Z Get:176 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-webencodings all 0.5.1-1ubuntu1 [11.0 kB] 2021-05-16T01:35:24.7173947Z Get:177 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-html5lib all 1.0.1-2 [84.3 kB] 2021-05-16T01:35:24.7184992Z Get:178 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-ipython-genutils all 0.2.0-1ubuntu1 [21.1 kB] 2021-05-16T01:35:24.7187176Z Get:179 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-traitlets all 4.3.3-3 [59.9 kB] 2021-05-16T01:35:24.7194731Z Get:180 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-jupyter-core all 4.6.3-3 [41.2 kB] 2021-05-16T01:35:24.7198598Z Get:181 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-kiwisolver amd64 1.0.1-3build1 [61.3 kB] 2021-05-16T01:35:24.7206258Z Get:182 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-lxml amd64 4.5.0-1ubuntu0.3 [1382 kB] 2021-05-16T01:35:24.7346536Z Get:183 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-pyparsing all 2.4.6-1 [61.3 kB] 2021-05-16T01:35:24.7354306Z Get:184 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-matplotlib amd64 3.1.2-1ubuntu4 [4459 kB] 2021-05-16T01:35:24.7698467Z Get:185 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-nbformat all 5.0.4-1 [29.8 kB] 2021-05-16T01:35:24.7704482Z Get:186 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-olefile all 0.46-2 [33.7 kB] 2021-05-16T01:35:24.7707484Z Get:187 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyproj amd64 2.5.0+ds-1 [297 kB] 2021-05-16T01:35:24.7735532Z Get:188 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-tz all 2019.3-1 [24.4 kB] 2021-05-16T01:35:24.7737938Z Get:189 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-owslib all 0.19.1-1 [115 kB] 2021-05-16T01:35:24.7749179Z Get:190 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-pil amd64 7.0.0-4ubuntu0.3 [363 kB] 2021-05-16T01:35:24.7791059Z Get:191 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-retrying all 1.3.3-4 [8160 B] 2021-05-16T01:35:24.7793072Z Get:192 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-plotly all 4.4.1+dfsg-1 [1960 kB] 2021-05-16T01:35:24.7949029Z Get:193 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-psycopg2 amd64 2.8.4-2 [112 kB] 2021-05-16T01:35:24.7962305Z Get:194 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-sip amd64 4.19.21+dfsg-1build1 [87.9 kB] 2021-05-16T01:35:24.7971618Z Get:195 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5 amd64 5.14.1+dfsg-3build1 [2318 kB] 2021-05-16T01:35:24.8221924Z Get:196 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qsci amd64 2.11.2+dfsg-6 [230 kB] 2021-05-16T01:35:24.8244450Z Get:197 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsql amd64 5.14.1+dfsg-3build1 [87.5 kB] 2021-05-16T01:35:24.8258331Z Get:198 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsvg amd64 5.14.1+dfsg-3build1 [26.9 kB] 2021-05-16T01:35:24.8261162Z Get:199 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtwebkit amd64 5.14.1+dfsg-3build1 [103 kB] 2021-05-16T01:35:24.8270577Z Get:200 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis-common all 3.10.4+dfsg-1ubuntu2 [2390 kB] 2021-05-16T01:35:24.8645840Z Get:201 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis amd64 3.10.4+dfsg-1ubuntu2 [7772 kB] 2021-05-16T01:35:25.0051322Z Get:202 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-tk amd64 3.8.5-1~20.04.1 [103 kB] 2021-05-16T01:35:25.0091123Z Get:203 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-leaflet all 1.6.0~dfsg-1 [313 kB] 2021-05-16T01:35:25.0156496Z Get:204 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-common all 3.10.4+dfsg-1ubuntu2 [16.7 MB] 2021-05-16T01:35:25.3026470Z Get:205 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis amd64 3.10.4+dfsg-1ubuntu2 [4788 kB] 2021-05-16T01:35:25.3421313Z Get:206 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass-common all 3.10.4+dfsg-1ubuntu2 [463 kB] 2021-05-16T01:35:25.3461979Z Get:207 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-provider-grass amd64 3.10.4+dfsg-1ubuntu2 [92.3 kB] 2021-05-16T01:35:25.3471670Z Get:208 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass amd64 3.10.4+dfsg-1ubuntu2 [601 kB] 2021-05-16T01:35:25.3522552Z Get:209 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-gtk-platformtheme amd64 5.12.8+dfsg-0ubuntu1 [124 kB] 2021-05-16T01:35:25.3534366Z Get:210 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttranslations5-l10n all 5.12.8-0ubuntu1 [1486 kB] 2021-05-16T01:35:25.3654493Z Get:211 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 wpasupplicant amd64 2:2.9-1ubuntu4.3 [1183 kB] 2021-05-16T01:35:25.3782569Z Get:212 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-bin amd64 6.3.1-1 [88.8 kB] 2021-05-16T01:35:25.3792052Z Get:213 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch-data all 20191128-3 [32.3 kB] 2021-05-16T01:35:25.3797941Z Get:214 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch amd64 2.5.2+repack0-2ubuntu3 [53.1 kB] 2021-05-16T01:35:26.4800211Z Fetched 183 MB in 2s (74.1 MB/s) 2021-05-16T01:35:26.5144642Z Selecting previously unselected package libdouble-conversion3:amd64. 2021-05-16T01:35:26.5220837Z (Reading database ... 2021-05-16T01:35:26.5221461Z (Reading database ... 5% 2021-05-16T01:35:26.5221980Z (Reading database ... 10% 2021-05-16T01:35:26.5222503Z (Reading database ... 15% 2021-05-16T01:35:26.5223057Z (Reading database ... 20% 2021-05-16T01:35:26.5223581Z (Reading database ... 25% 2021-05-16T01:35:26.5224089Z (Reading database ... 30% 2021-05-16T01:35:26.5224608Z (Reading database ... 35% 2021-05-16T01:35:26.5225103Z (Reading database ... 40% 2021-05-16T01:35:26.5225617Z (Reading database ... 45% 2021-05-16T01:35:26.5226131Z (Reading database ... 50% 2021-05-16T01:35:26.5247894Z (Reading database ... 55% 2021-05-16T01:35:26.5292421Z (Reading database ... 60% 2021-05-16T01:35:26.5321978Z (Reading database ... 65% 2021-05-16T01:35:26.5436898Z (Reading database ... 70% 2021-05-16T01:35:26.5552991Z (Reading database ... 75% 2021-05-16T01:35:26.5579721Z (Reading database ... 80% 2021-05-16T01:35:26.5935358Z (Reading database ... 85% 2021-05-16T01:35:26.6206086Z (Reading database ... 90% 2021-05-16T01:35:26.6279750Z (Reading database ... 95% 2021-05-16T01:35:26.6280679Z (Reading database ... 100% 2021-05-16T01:35:26.6282155Z (Reading database ... 269928 files and directories currently installed.) 2021-05-16T01:35:26.6380026Z Preparing to unpack .../000-libdouble-conversion3_3.1.5-4ubuntu1_amd64.deb ... 2021-05-16T01:35:26.6402660Z Unpacking libdouble-conversion3:amd64 (3.1.5-4ubuntu1) ... 2021-05-16T01:35:26.6794563Z Selecting previously unselected package libqt5core5a:amd64. 2021-05-16T01:35:26.7018873Z Preparing to unpack .../001-libqt5core5a_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-05-16T01:35:26.7129915Z Unpacking libqt5core5a:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:35:26.9075886Z Selecting previously unselected package libegl-mesa0:amd64. 2021-05-16T01:35:26.9336548Z Preparing to unpack .../002-libegl-mesa0_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-16T01:35:26.9352503Z Unpacking libegl-mesa0:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-16T01:35:26.9726870Z Selecting previously unselected package libegl1:amd64. 2021-05-16T01:35:27.0020908Z Preparing to unpack .../003-libegl1_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-16T01:35:27.0031957Z Unpacking libegl1:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-16T01:35:27.0395623Z Selecting previously unselected package libevdev2:amd64. 2021-05-16T01:35:27.0639714Z Preparing to unpack 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/etc/systemd/system/dbus-fi.w1.wpa_supplicant1.service → /lib/systemd/system/wpa_supplicant.service. 2021-05-16T01:36:05.0423186Z Created symlink /etc/systemd/system/multi-user.target.wants/wpa_supplicant.service → /lib/systemd/system/wpa_supplicant.service. 2021-05-16T01:36:05.5818921Z Setting up python3-pil:amd64 (7.0.0-4ubuntu0.3) ... 2021-05-16T01:36:05.8547390Z Setting up libqt5xml5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:36:05.8596899Z Setting up gstreamer1.0-plugins-base:amd64 (1.16.2-4) ... 2021-05-16T01:36:05.8635169Z Setting up libqt5qml5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T01:36:05.8663270Z Setting up qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T01:36:05.8695727Z Setting up qtattributionsscanner-qt5 (5.12.8-0ubuntu1) ... 2021-05-16T01:36:05.8727307Z Setting up libqt5webchannel5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T01:36:05.8760467Z Setting up python3-plotly (4.4.1+dfsg-1) ... 2021-05-16T01:36:06.0394528Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T01:36:06.0397766Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-05-16T01:36:06.0401087Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T01:36:06.0403884Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-05-16T01:36:06.0862067Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:194: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T01:36:06.0863460Z if direction is "increasing": 2021-05-16T01:36:06.0865066Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:199: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T01:36:06.0866206Z elif direction is "decreasing": 2021-05-16T01:36:06.1059567Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:176: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T01:36:06.1060977Z if direction is "increasing": 2021-05-16T01:36:06.1062640Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:179: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T01:36:06.1063830Z elif direction is "decreasing": 2021-05-16T01:36:07.0759544Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:460: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T01:36:07.0762310Z if props["offset_coordinates"] is "data": 2021-05-16T01:36:07.0765589Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:572: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-05-16T01:36:07.0767804Z if props["coordinates"] is not "data": 2021-05-16T01:36:07.9154837Z Setting up avahi-daemon (0.7-4ubuntu7) ... 2021-05-16T01:36:08.5157376Z Created symlink /etc/systemd/system/dbus-org.freedesktop.Avahi.service → /lib/systemd/system/avahi-daemon.service. 2021-05-16T01:36:08.5159947Z Created symlink /etc/systemd/system/multi-user.target.wants/avahi-daemon.service → /lib/systemd/system/avahi-daemon.service. 2021-05-16T01:36:08.5162499Z Created symlink /etc/systemd/system/sockets.target.wants/avahi-daemon.socket → /lib/systemd/system/avahi-daemon.socket. 2021-05-16T01:36:09.6596326Z Setting up libnss-mdns:amd64 (0.14.1-1ubuntu1) ... 2021-05-16T01:36:09.6635366Z First installation detected... 2021-05-16T01:36:09.6636218Z Checking NSS setup... 2021-05-16T01:36:09.6672790Z Setting up libwacom2:amd64 (1.3-2ubuntu3) ... 2021-05-16T01:36:09.6745998Z Setting up libqt5sql5-sqlite:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:36:09.6832929Z Setting up python3-owslib (0.19.1-1) ... 2021-05-16T01:36:09.9578190Z Setting up libgdal26 (3.0.4+dfsg-1build3) ... 2021-05-16T01:36:09.9632461Z Setting up libqmi-glib5:amd64 (1.24.8-1) ... 2021-05-16T01:36:09.9682045Z Setting up libpdal-base9 (2.0.1+ds-1build3) ... 2021-05-16T01:36:09.9717499Z Setting up libinput-bin (1.15.5-1ubuntu0.2) ... 2021-05-16T01:36:09.9753187Z Setting up libwacom-bin (1.3-2ubuntu3) ... 2021-05-16T01:36:09.9799902Z Setting up libpdal-plugin-pgpointcloud (2.0.1+ds-1build3) ... 2021-05-16T01:36:09.9848469Z Setting up libpdal-plugin-icebridge (2.0.1+ds-1build3) ... 2021-05-16T01:36:09.9911249Z Setting up libpdal-plugin-python (2.0.1+ds-1build3) ... 2021-05-16T01:36:09.9958102Z Setting up python3-gdal (3.0.4+dfsg-1build3) ... 2021-05-16T01:36:10.1961402Z Setting up libinput10:amd64 (1.15.5-1ubuntu0.2) ... 2021-05-16T01:36:10.2022091Z Setting up libpdal-plugin-faux (2.0.1+ds-1build3) ... 2021-05-16T01:36:10.2055916Z Setting up grass-core (7.8.2-1build3) ... 2021-05-16T01:36:10.5593192Z /usr/lib/grass78/etc/python/grass/pygrass/gis/__init__.py:75: SyntaxWarning: "is" with a literal. 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Did you mean "=="? 2021-05-16T01:36:10.7068067Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-05-16T01:36:10.7070298Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-16T01:36:10.7072295Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-05-16T01:36:10.7707421Z Setting up libpdal-plugin-sqlite (2.0.1+ds-1build3) ... 2021-05-16T01:36:10.7740973Z Setting up libqt5gui5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:36:10.7832996Z Setting up libqmi-proxy (1.24.8-1) ... 2021-05-16T01:36:10.7888746Z Setting up libqt5widgets5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:36:10.7947237Z Setting up libqt53dcore5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:36:10.8114007Z Setting up libqt5help5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T01:36:10.8147066Z Setting up libqt53dlogic5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:36:10.8177691Z Setting up qt5-gtk-platformtheme:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:36:10.8219738Z Setting up libqgis-native3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T01:36:10.8258706Z Setting up libqt5printsupport5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:36:10.8300285Z Setting up gdal-bin (3.0.4+dfsg-1build3) ... 2021-05-16T01:36:10.9178584Z Setting up qt5-image-formats-plugins:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T01:36:10.9225764Z Setting up libqt53dinput5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:36:10.9270442Z Setting up libqt5opengl5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:36:10.9314032Z Setting up modemmanager (1.12.8-1) ... 2021-05-16T01:36:11.0710745Z Created symlink /etc/systemd/system/dbus-org.freedesktop.ModemManager1.service → /lib/systemd/system/ModemManager.service. 2021-05-16T01:36:11.0713475Z Created symlink /etc/systemd/system/multi-user.target.wants/ModemManager.service → /lib/systemd/system/ModemManager.service. 2021-05-16T01:36:11.6538279Z Setting up libqt5quick5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T01:36:11.6581520Z Setting up libqt5designer5:amd64 (5.12.8-0ubuntu1) ... 2021-05-16T01:36:11.6617582Z Setting up libpdal-plugins (2.0.1+ds-1build3) ... 2021-05-16T01:36:11.6649830Z Setting up libqt5svg5:amd64 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2021-05-16T01:36:11.7141520Z Setting up qt5-assistant (5.12.8-0ubuntu1) ... 2021-05-16T01:36:11.7176532Z Setting up qttools5-dev-tools (5.12.8-0ubuntu1) ... 2021-05-16T01:36:11.7217099Z Setting up libqgispython3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T01:36:11.7257854Z Setting up qt3d-scene2d-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:36:11.7282553Z Setting up python3-pyqt5 (5.14.1+dfsg-3build1) ... 2021-05-16T01:36:11.8998521Z Setting up python3-pyqt5.qtsvg (5.14.1+dfsg-3build1) ... 2021-05-16T01:36:11.9053081Z Setting up libqt53danimation5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:36:11.9092797Z Setting up qt3d-defaultgeometryloader-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:36:11.9134459Z Setting up qgis-providers (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T01:36:44.0949906Z Setting up libqt53dextras5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:36:44.0992826Z Setting up python3-pyqt5.qtsql (5.14.1+dfsg-3build1) ... 2021-05-16T01:36:44.1019523Z Setting up libqgis-customwidgets (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T01:36:44.1057528Z Setting up qt3d-gltfsceneio-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:36:44.1084834Z Setting up libqgis-server3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T01:36:44.1120842Z Setting up libqgisgrass7-3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T01:36:44.1175420Z Setting up qt3d-assimpsceneimport-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-16T01:36:44.1209789Z Setting up python3-qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T01:36:44.2736632Z Setting up libqgis-3d3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T01:36:44.2782917Z Setting up python3-pyqt5.qtwebkit (5.14.1+dfsg-3build1) ... 2021-05-16T01:36:44.2824648Z Setting up qgis-provider-grass (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T01:36:44.2859922Z Setting up python3-pyqt5.qsci (2.11.2+dfsg-6) ... 2021-05-16T01:36:44.2899590Z Setting up python3-qgis (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T01:36:44.4602503Z Setting up libqgis-app3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T01:36:44.4648545Z Setting up qgis (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T01:36:44.4706333Z Setting up qgis-plugin-grass (3.10.4+dfsg-1ubuntu2) ... 2021-05-16T01:36:44.4830527Z Processing triggers for dbus (1.12.16-2ubuntu2.1) ... 2021-05-16T01:36:44.5004136Z Processing triggers for shared-mime-info (1.15-1) ... 2021-05-16T01:36:45.5498877Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-16T01:36:45.5685738Z Processing triggers for mime-support (3.64ubuntu1) ... 2021-05-16T01:36:45.5945136Z Processing triggers for hicolor-icon-theme (0.17-2) ... 2021-05-16T01:36:45.6110737Z Processing triggers for libglib2.0-0:amd64 (2.64.6-1~ubuntu20.04.3) ... 2021-05-16T01:36:45.7567466Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:36:45.7931281Z Processing triggers for systemd (245.4-4ubuntu3.6) ... 2021-05-16T01:36:46.0677358Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:36:57.4576163Z Setting up pinentry-gnome3 (1.1.0-3build1) ... 2021-05-16T01:36:57.4766280Z Setting up gnome-keyring (3.36.0-1ubuntu1) ... 2021-05-16T01:36:59.4349908Z ##[group]Run adigherman/actions/get-repo-name@master 2021-05-16T01:36:59.4350457Z with: 2021-05-16T01:36:59.4350949Z github_slug: neuroconductor/bftools 2021-05-16T01:36:59.4351418Z env: 2021-05-16T01:36:59.4351858Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:36:59.4352337Z TIC_DEPLOY_KEY: 2021-05-16T01:36:59.4353195Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:36:59.4355244Z GITHUB_PAT: *** 2021-05-16T01:36:59.4355646Z COVERALLS_TOKEN: 2021-05-16T01:36:59.4356146Z continue-on-error: true 2021-05-16T01:36:59.4356619Z VDIFFR_RUN_TESTS: 2021-05-16T01:36:59.4357121Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:36:59.4357576Z TZ: UTC 2021-05-16T01:36:59.4357972Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:36:59.4358396Z NOT_CRAN: true 2021-05-16T01:36:59.4358769Z ##[endgroup] 2021-05-16T01:36:59.4699855Z repo slug is: neuroconductor/bftools 2021-05-16T01:36:59.4804261Z ##[group]Run adigherman/actions/get-repo-version@master 2021-05-16T01:36:59.4804886Z env: 2021-05-16T01:36:59.4805362Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:36:59.4805878Z TIC_DEPLOY_KEY: 2021-05-16T01:36:59.4806890Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:36:59.4808267Z GITHUB_PAT: *** 2021-05-16T01:36:59.4808661Z COVERALLS_TOKEN: 2021-05-16T01:36:59.4809162Z continue-on-error: true 2021-05-16T01:36:59.4809712Z VDIFFR_RUN_TESTS: 2021-05-16T01:36:59.4810149Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:36:59.4810543Z TZ: UTC 2021-05-16T01:36:59.4810877Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:36:59.4811249Z NOT_CRAN: true 2021-05-16T01:36:59.4811568Z ##[endgroup] 2021-05-16T01:36:59.7040137Z ##[group]Run adigherman/actions/get-release-asset@master 2021-05-16T01:36:59.7040780Z with: 2021-05-16T01:36:59.7041220Z repo_name: bftools 2021-05-16T01:36:59.7041643Z repo_version: 0.2.3.3 2021-05-16T01:36:59.7042039Z runner_os: Linux 2021-05-16T01:36:59.7042425Z R_version: 4.1 2021-05-16T01:36:59.7042793Z env: 2021-05-16T01:36:59.7043255Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:36:59.7043740Z TIC_DEPLOY_KEY: 2021-05-16T01:36:59.7044618Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:36:59.7046603Z GITHUB_PAT: *** 2021-05-16T01:36:59.7047010Z COVERALLS_TOKEN: 2021-05-16T01:36:59.7047523Z continue-on-error: true 2021-05-16T01:36:59.7048002Z VDIFFR_RUN_TESTS: 2021-05-16T01:36:59.7048498Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:36:59.7048938Z TZ: UTC 2021-05-16T01:36:59.7049336Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:36:59.7049746Z NOT_CRAN: true 2021-05-16T01:36:59.7050138Z ##[endgroup] 2021-05-16T01:36:59.7677087Z Package: bftools 2021-05-16T01:36:59.7682216Z Version: 0.2.3.3 2021-05-16T01:36:59.7682650Z OS: Linux 2021-05-16T01:36:59.7736311Z ##[group]Run install.packages('remotes') 2021-05-16T01:36:59.7737015Z install.packages('remotes') 2021-05-16T01:36:59.7737830Z saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) 2021-05-16T01:36:59.7738859Z writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") 2021-05-16T01:36:59.7745529Z shell: /usr/local/bin/Rscript {0} 2021-05-16T01:36:59.7745895Z env: 2021-05-16T01:36:59.7746279Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:36:59.7746698Z TIC_DEPLOY_KEY: 2021-05-16T01:36:59.7747462Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:36:59.7748945Z GITHUB_PAT: *** 2021-05-16T01:36:59.7749361Z COVERALLS_TOKEN: 2021-05-16T01:36:59.7749843Z continue-on-error: true 2021-05-16T01:36:59.7750446Z VDIFFR_RUN_TESTS: 2021-05-16T01:36:59.7750931Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:36:59.7751391Z TZ: UTC 2021-05-16T01:36:59.7751789Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:36:59.7752209Z NOT_CRAN: true 2021-05-16T01:36:59.7752579Z ##[endgroup] 2021-05-16T01:36:59.9500701Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T01:36:59.9503061Z (as ‘lib’ is unspecified) 2021-05-16T01:37:15.4844649Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/remotes_2.3.0.tar.gz' 2021-05-16T01:37:16.0380381Z Content type 'binary/octet-stream' length 148709 bytes (145 KB) 2021-05-16T01:37:16.1170974Z ================================================== 2021-05-16T01:37:16.1171937Z downloaded 145 KB 2021-05-16T01:37:16.1172459Z 2021-05-16T01:37:16.4105698Z * installing *source* package ‘remotes’ ... 2021-05-16T01:37:16.4153278Z ** package ‘remotes’ successfully unpacked and MD5 sums checked 2021-05-16T01:37:16.4154888Z ** using staged installation 2021-05-16T01:37:16.4339389Z ** R 2021-05-16T01:37:16.4536807Z ** inst 2021-05-16T01:37:16.4548141Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:37:18.2114712Z ** help 2021-05-16T01:37:18.2988869Z *** installing help indices 2021-05-16T01:37:18.3545321Z ** building package indices 2021-05-16T01:37:18.5874798Z ** installing vignettes 2021-05-16T01:37:18.5918818Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:37:18.7724970Z ** testing if installed package can be loaded from final location 2021-05-16T01:37:18.9735926Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:37:18.9757905Z * DONE (remotes) 2021-05-16T01:37:18.9825747Z 2021-05-16T01:37:18.9826654Z The downloaded source packages are in 2021-05-16T01:37:18.9828327Z ‘/tmp/RtmpLrVzM4/downloaded_packages’ 2021-05-16T01:37:36.6978723Z ##[group]Run actions/cache@v1 2021-05-16T01:37:36.6979157Z with: 2021-05-16T01:37:36.6979592Z path: /home/runner/work/_temp/Library 2021-05-16T01:37:36.6982791Z key: Linux-e3adb7ee20b68d8bd651f6f30d4cc1690a70853cf8f0c4dcbc5c14b00f693a6a-1-f4417bbc57e4345243c4b563d05aba2c710052401437139e9b5ce874c6e0fa9a 2021-05-16T01:37:36.6986931Z restore-keys: Linux-e3adb7ee20b68d8bd651f6f30d4cc1690a70853cf8f0c4dcbc5c14b00f693a6a-1- 2021-05-16T01:37:36.6988508Z env: 2021-05-16T01:37:36.6988981Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:37:36.6989499Z TIC_DEPLOY_KEY: 2021-05-16T01:37:36.6990422Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:37:36.6992525Z GITHUB_PAT: *** 2021-05-16T01:37:36.6992975Z COVERALLS_TOKEN: 2021-05-16T01:37:36.6993500Z continue-on-error: true 2021-05-16T01:37:36.6994208Z VDIFFR_RUN_TESTS: 2021-05-16T01:37:36.6994730Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:37:36.6995276Z TZ: UTC 2021-05-16T01:37:36.6995706Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:37:36.6996143Z NOT_CRAN: true 2021-05-16T01:37:36.6996552Z ##[endgroup] 2021-05-16T01:37:36.7453432Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-05-16T01:37:36.7539415Z ##[group]Run Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-05-16T01:37:36.7540232Z Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-05-16T01:37:36.7540997Z sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") 2021-05-16T01:37:36.7541630Z sudo -s eval "$sysreqs" 2021-05-16T01:37:36.7585312Z shell: /usr/bin/bash -e {0} 2021-05-16T01:37:36.7585652Z env: 2021-05-16T01:37:36.7586054Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:37:36.7586467Z TIC_DEPLOY_KEY: 2021-05-16T01:37:36.7587233Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:37:36.7588499Z GITHUB_PAT: *** 2021-05-16T01:37:36.7588866Z COVERALLS_TOKEN: 2021-05-16T01:37:36.7589303Z continue-on-error: true 2021-05-16T01:37:36.7589825Z VDIFFR_RUN_TESTS: 2021-05-16T01:37:36.7590260Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:37:36.7590807Z TZ: UTC 2021-05-16T01:37:36.7591175Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:37:36.7591553Z NOT_CRAN: true 2021-05-16T01:37:36.7591971Z RHUB_PLATFORM: linux-x86_64-ubuntu-gcc 2021-05-16T01:37:36.7592405Z ##[endgroup] 2021-05-16T01:37:36.9469342Z Using github PAT from envvar GITHUB_PAT 2021-05-16T01:37:37.4796150Z Downloading GitHub repo r-hub/sysreqs@HEAD 2021-05-16T01:37:53.2366474Z rprojroot (NA -> 2.0.2) [CRAN] 2021-05-16T01:37:53.2374468Z crayon (NA -> 1.4.1) [CRAN] 2021-05-16T01:37:53.2375679Z R6 (NA -> 2.5.0) [CRAN] 2021-05-16T01:37:53.2376822Z desc (NA -> 1.3.0) [CRAN] 2021-05-16T01:37:53.2377994Z debugme (NA -> 1.1.0) [CRAN] 2021-05-16T01:37:53.2395630Z Installing 5 packages: rprojroot, crayon, R6, desc, debugme 2021-05-16T01:37:53.2407993Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T01:37:53.2409575Z (as ‘lib’ is unspecified) 2021-05-16T01:38:07.5406342Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rprojroot_2.0.2.tar.gz' 2021-05-16T01:38:09.9124777Z Content type 'binary/octet-stream' length 61445 bytes (60 KB) 2021-05-16T01:38:09.9562989Z ================================================== 2021-05-16T01:38:09.9564640Z downloaded 60 KB 2021-05-16T01:38:09.9567216Z 2021-05-16T01:38:09.9612160Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/crayon_1.4.1.tar.gz' 2021-05-16T01:38:10.6219401Z Content type 'binary/octet-stream' length 35834 bytes (34 KB) 2021-05-16T01:38:10.6320881Z ================================================== 2021-05-16T01:38:10.6321401Z downloaded 34 KB 2021-05-16T01:38:10.6321694Z 2021-05-16T01:38:10.6359311Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R6_2.5.0.tar.gz' 2021-05-16T01:38:11.4270817Z Content type 'binary/octet-stream' length 64110 bytes (62 KB) 2021-05-16T01:38:11.4273093Z ================================================== 2021-05-16T01:38:11.4274555Z downloaded 62 KB 2021-05-16T01:38:11.4275297Z 2021-05-16T01:38:11.4320954Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/desc_1.3.0.tar.gz' 2021-05-16T01:38:12.1484388Z Content type 'binary/octet-stream' length 292756 bytes (285 KB) 2021-05-16T01:38:12.2785478Z ================================================== 2021-05-16T01:38:12.2786164Z downloaded 285 KB 2021-05-16T01:38:12.2786510Z 2021-05-16T01:38:12.2829120Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/debugme_1.1.0.tar.gz' 2021-05-16T01:38:14.2318371Z Content type 'application/x-tar' length 997019 bytes (973 KB) 2021-05-16T01:38:14.2320213Z ================================================== 2021-05-16T01:38:14.2321173Z downloaded 973 KB 2021-05-16T01:38:14.2321724Z 2021-05-16T01:38:14.2323677Z * installing *source* package ‘rprojroot’ ... 2021-05-16T01:38:14.2325649Z ** package ‘rprojroot’ successfully unpacked and MD5 sums checked 2021-05-16T01:38:14.2327154Z ** using staged installation 2021-05-16T01:38:14.2327975Z ** R 2021-05-16T01:38:14.2329100Z ** inst 2021-05-16T01:38:14.2330758Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:38:14.5827700Z ** help 2021-05-16T01:38:14.6107229Z *** installing help indices 2021-05-16T01:38:14.6386983Z *** copying figures 2021-05-16T01:38:14.6391361Z ** building package indices 2021-05-16T01:38:14.8594827Z ** installing vignettes 2021-05-16T01:38:14.8598426Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:38:15.0439602Z ** testing if installed package can be loaded from final location 2021-05-16T01:38:15.2323293Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:38:15.2331650Z * DONE (rprojroot) 2021-05-16T01:38:15.4766296Z * installing *source* package ‘crayon’ ... 2021-05-16T01:38:15.4784795Z ** package ‘crayon’ successfully unpacked and MD5 sums checked 2021-05-16T01:38:15.4787201Z ** using staged installation 2021-05-16T01:38:15.4908689Z ** R 2021-05-16T01:38:15.4994932Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:38:16.3249455Z ** help 2021-05-16T01:38:16.3775743Z *** installing help indices 2021-05-16T01:38:16.4134148Z ** building package indices 2021-05-16T01:38:16.6404328Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:38:16.8192792Z ** testing if installed package can be loaded from final location 2021-05-16T01:38:17.0033986Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:38:17.0044099Z * DONE (crayon) 2021-05-16T01:38:17.2430967Z * installing *source* package ‘R6’ ... 2021-05-16T01:38:17.2448958Z ** package ‘R6’ successfully unpacked and MD5 sums checked 2021-05-16T01:38:17.2450957Z ** using staged installation 2021-05-16T01:38:17.2578003Z ** R 2021-05-16T01:38:17.2648768Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:38:17.7451857Z ** help 2021-05-16T01:38:17.7651339Z *** installing help indices 2021-05-16T01:38:17.7845078Z *** copying figures 2021-05-16T01:38:17.7848553Z ** building package indices 2021-05-16T01:38:17.9771886Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:38:18.1533493Z ** testing if installed package can be loaded from final location 2021-05-16T01:38:18.3294393Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:38:18.3301970Z * DONE (R6) 2021-05-16T01:38:18.6265916Z * installing *source* package ‘desc’ ... 2021-05-16T01:38:18.6315760Z ** package ‘desc’ successfully unpacked and MD5 sums checked 2021-05-16T01:38:18.6317191Z ** using staged installation 2021-05-16T01:38:18.6464631Z ** R 2021-05-16T01:38:18.6591866Z ** inst 2021-05-16T01:38:18.6608095Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:38:20.1073107Z ** help 2021-05-16T01:38:20.2349915Z *** installing help indices 2021-05-16T01:38:20.3175870Z ** building package indices 2021-05-16T01:38:20.5879753Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:38:20.7775083Z ** testing if installed package can be loaded from final location 2021-05-16T01:38:20.9904000Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:38:20.9921381Z * DONE (desc) 2021-05-16T01:38:21.2506131Z * installing *source* package ‘debugme’ ... 2021-05-16T01:38:21.2541390Z ** package ‘debugme’ successfully unpacked and MD5 sums checked 2021-05-16T01:38:21.2543337Z ** using staged installation 2021-05-16T01:38:21.2651886Z ** R 2021-05-16T01:38:21.2685355Z ** inst 2021-05-16T01:38:21.2705765Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:38:21.5794523Z ** help 2021-05-16T01:38:21.5915920Z *** installing help indices 2021-05-16T01:38:21.6128325Z ** building package indices 2021-05-16T01:38:21.8048823Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:38:21.9861539Z ** testing if installed package can be loaded from final location 2021-05-16T01:38:22.1760209Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:38:22.1766273Z * DONE (debugme) 2021-05-16T01:38:22.1823571Z 2021-05-16T01:38:22.1824612Z The downloaded source packages are in 2021-05-16T01:38:22.1826060Z ‘/tmp/RtmpfvubzS/downloaded_packages’ 2021-05-16T01:38:22.1834818Z Running `R CMD build`... 2021-05-16T01:38:22.4277370Z * checking for file ‘/tmp/RtmpfvubzS/remotes68dabbe4825/r-hub-sysreqs-f068afa/DESCRIPTION’ ... OK 2021-05-16T01:38:22.4278763Z * preparing ‘sysreqs’: 2021-05-16T01:38:22.4279749Z * checking DESCRIPTION meta-information ... OK 2021-05-16T01:38:22.4281048Z * checking for LF line-endings in source and make files and shell scripts 2021-05-16T01:38:22.4281977Z * checking for empty or unneeded directories 2021-05-16T01:38:22.4282926Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-16T01:38:22.4283807Z * building ‘sysreqs_1.0.0.9000.tar.gz’ 2021-05-16T01:38:22.4286009Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T01:38:22.4286934Z (as ‘lib’ is unspecified) 2021-05-16T01:38:22.6375095Z * installing *source* package ‘sysreqs’ ... 2021-05-16T01:38:22.6377416Z ** using staged installation 2021-05-16T01:38:22.6507542Z ** R 2021-05-16T01:38:22.6540696Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:38:23.0234548Z ** help 2021-05-16T01:38:23.0448855Z *** installing help indices 2021-05-16T01:38:23.0634167Z ** building package indices 2021-05-16T01:38:23.2612322Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:38:23.4614106Z ** testing if installed package can be loaded from final location 2021-05-16T01:38:23.6527545Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:38:23.6534314Z * DONE (sysreqs) 2021-05-16T01:38:40.1763841Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-05-16T01:38:40.1766468Z Hit:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease 2021-05-16T01:38:40.1768471Z Hit:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease 2021-05-16T01:38:40.1837179Z Hit:4 http://security.ubuntu.com/ubuntu focal-security InRelease 2021-05-16T01:38:40.2368846Z Hit:5 https://download.mono-project.com/repo/ubuntu stable-focal InRelease 2021-05-16T01:38:40.3093502Z Hit:6 http://ppa.launchpad.net/apt-fast/stable/ubuntu focal InRelease 2021-05-16T01:38:40.4133917Z Hit:7 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease 2021-05-16T01:38:40.4674242Z Hit:8 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease 2021-05-16T01:38:40.6251096Z Hit:9 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-05-16T01:38:41.9015486Z Reading package lists... 2021-05-16T01:38:41.9786217Z Reading package lists... 2021-05-16T01:38:42.1230098Z Building dependency tree... 2021-05-16T01:38:42.1253299Z Reading state information... 2021-05-16T01:38:42.2796894Z libicu-dev is already the newest version (66.1-2ubuntu2). 2021-05-16T01:38:42.2799427Z libicu-dev set to manually installed. 2021-05-16T01:38:42.2800474Z libpng-dev is already the newest version (1.6.37-2). 2021-05-16T01:38:42.2801434Z libxml2-dev is already the newest version (2.9.10+dfsg-5). 2021-05-16T01:38:42.2802319Z libxml2-dev set to manually installed. 2021-05-16T01:38:42.2803274Z libssl-dev is already the newest version (1.1.1f-1ubuntu2.3). 2021-05-16T01:38:42.2804193Z pandoc is already the newest version (2.7.3-1). 2021-05-16T01:38:42.2805144Z The following additional packages will be installed: 2021-05-16T01:38:42.2806333Z libbibutils6 libghc-pandoc-citeproc-data 2021-05-16T01:38:42.2808194Z Suggested packages: 2021-05-16T01:38:42.2809422Z libcurl4-doc libidn11-dev libldap2-dev librtmp-dev 2021-05-16T01:38:42.3294611Z The following NEW packages will be installed: 2021-05-16T01:38:42.3299057Z libbibutils6 libcurl4-openssl-dev libghc-pandoc-citeproc-data 2021-05-16T01:38:42.3300426Z pandoc-citeproc 2021-05-16T01:38:42.3544061Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-16T01:38:42.3545036Z Need to get 13.7 MB of archives. 2021-05-16T01:38:42.3546122Z After this operation, 109 MB of additional disk space will be used. 2021-05-16T01:38:42.3548351Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbibutils6 amd64 6.2-1 [365 kB] 2021-05-16T01:38:42.3702116Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcurl4-openssl-dev amd64 7.68.0-1ubuntu2.5 [321 kB] 2021-05-16T01:38:42.3756840Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libghc-pandoc-citeproc-data all 0.15.0.1-1build4 [51.1 kB] 2021-05-16T01:38:42.3845699Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 pandoc-citeproc amd64 0.15.0.1-1build4 [12.9 MB] 2021-05-16T01:38:43.2073751Z Fetched 13.7 MB in 0s (31.1 MB/s) 2021-05-16T01:38:43.2413745Z Selecting previously unselected package libbibutils6. 2021-05-16T01:38:43.2502917Z (Reading database ... 2021-05-16T01:38:43.2504015Z (Reading database ... 5% 2021-05-16T01:38:43.2504761Z (Reading database ... 10% 2021-05-16T01:38:43.2505460Z (Reading database ... 15% 2021-05-16T01:38:43.2507047Z (Reading database ... 20% 2021-05-16T01:38:43.2509197Z (Reading database ... 25% 2021-05-16T01:38:43.2509924Z (Reading database ... 30% 2021-05-16T01:38:43.2510633Z (Reading database ... 35% 2021-05-16T01:38:43.2511343Z (Reading database ... 40% 2021-05-16T01:38:43.2512036Z (Reading database ... 45% 2021-05-16T01:38:43.2512784Z (Reading database ... 50% 2021-05-16T01:38:43.2556819Z (Reading database ... 55% 2021-05-16T01:38:43.2602358Z (Reading database ... 60% 2021-05-16T01:38:43.2642560Z (Reading database ... 65% 2021-05-16T01:38:43.2832528Z (Reading database ... 70% 2021-05-16T01:38:43.2865060Z (Reading database ... 75% 2021-05-16T01:38:43.3120252Z (Reading database ... 80% 2021-05-16T01:38:43.3214098Z (Reading database ... 85% 2021-05-16T01:38:43.3604264Z (Reading database ... 90% 2021-05-16T01:38:43.3679043Z (Reading database ... 95% 2021-05-16T01:38:43.3679936Z (Reading database ... 100% 2021-05-16T01:38:43.3681159Z (Reading database ... 285139 files and directories currently installed.) 2021-05-16T01:38:43.3798674Z Preparing to unpack .../libbibutils6_6.2-1_amd64.deb ... 2021-05-16T01:38:43.3839100Z Unpacking libbibutils6 (6.2-1) ... 2021-05-16T01:38:43.4596008Z Selecting previously unselected package libcurl4-openssl-dev:amd64. 2021-05-16T01:38:43.4875087Z Preparing to unpack .../libcurl4-openssl-dev_7.68.0-1ubuntu2.5_amd64.deb ... 2021-05-16T01:38:43.4888838Z Unpacking libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-05-16T01:38:43.5555429Z Selecting previously unselected package libghc-pandoc-citeproc-data. 2021-05-16T01:38:43.5765408Z Preparing to unpack .../libghc-pandoc-citeproc-data_0.15.0.1-1build4_all.deb ... 2021-05-16T01:38:43.5780802Z Unpacking libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-05-16T01:38:43.6104633Z Selecting previously unselected package pandoc-citeproc. 2021-05-16T01:38:43.6401928Z Preparing to unpack .../pandoc-citeproc_0.15.0.1-1build4_amd64.deb ... 2021-05-16T01:38:43.6423525Z Unpacking pandoc-citeproc (0.15.0.1-1build4) ... 2021-05-16T01:38:43.6454291Z Replaced by files in installed package pandoc (2.7.3-1) ... 2021-05-16T01:38:45.0695036Z Setting up libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-05-16T01:38:45.0750928Z Setting up libbibutils6 (6.2-1) ... 2021-05-16T01:38:45.0794780Z Setting up libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-05-16T01:38:45.0821857Z Setting up pandoc-citeproc (0.15.0.1-1build4) ... 2021-05-16T01:38:45.0856027Z Processing triggers for man-db (2.9.1-1) ... 2021-05-16T01:38:48.4008831Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-16T01:38:50.4251870Z ##[group]Run remotes::install_github("ropensci/tic") 2021-05-16T01:38:50.4252608Z remotes::install_github("ropensci/tic") 2021-05-16T01:38:50.4253617Z remotes::install_github("muschellij2/ghtravis") 2021-05-16T01:38:50.4254316Z remotes::install_github("muschellij2/aghast") 2021-05-16T01:38:50.4254979Z remotes::install_cran("covr") 2021-05-16T01:38:50.4262028Z shell: /usr/local/bin/Rscript {0} 2021-05-16T01:38:50.4262446Z env: 2021-05-16T01:38:50.4262968Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:38:50.4263455Z TIC_DEPLOY_KEY: 2021-05-16T01:38:50.4264334Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:38:50.4266338Z GITHUB_PAT: *** 2021-05-16T01:38:50.4266754Z COVERALLS_TOKEN: 2021-05-16T01:38:50.4267289Z continue-on-error: true 2021-05-16T01:38:50.4267767Z VDIFFR_RUN_TESTS: 2021-05-16T01:38:50.4268273Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:38:50.4268762Z TZ: UTC 2021-05-16T01:38:50.4269152Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:38:50.4269580Z NOT_CRAN: true 2021-05-16T01:38:50.4269962Z ##[endgroup] 2021-05-16T01:38:50.6270782Z Using github PAT from envvar GITHUB_PAT 2021-05-16T01:38:51.1865886Z Downloading GitHub repo ropensci/tic@HEAD 2021-05-16T01:39:07.0386574Z rlang (NA -> 0.4.11) [CRAN] 2021-05-16T01:39:07.0387935Z magrittr (NA -> 2.0.1 ) [CRAN] 2021-05-16T01:39:07.0389138Z glue (NA -> 1.4.2 ) [CRAN] 2021-05-16T01:39:07.0390302Z sys (NA -> 3.4 ) [CRAN] 2021-05-16T01:39:07.0391492Z askpass (NA -> 1.1 ) [CRAN] 2021-05-16T01:39:07.0392698Z openssl (NA -> 1.4.4 ) [CRAN] 2021-05-16T01:39:07.0394198Z mime (NA -> 0.10 ) [CRAN] 2021-05-16T01:39:07.0395376Z curl (NA -> 4.3.1 ) [CRAN] 2021-05-16T01:39:07.0396576Z jsonlite (NA -> 1.7.2 ) [CRAN] 2021-05-16T01:39:07.0397740Z ini (NA -> 0.3.1 ) [CRAN] 2021-05-16T01:39:07.0398899Z httr (NA -> 1.4.2 ) [CRAN] 2021-05-16T01:39:07.0400104Z gitcreds (NA -> 0.1.1 ) [CRAN] 2021-05-16T01:39:07.0401292Z cli (NA -> 2.5.0 ) [CRAN] 2021-05-16T01:39:07.0402418Z zip (NA -> 2.1.1 ) [CRAN] 2021-05-16T01:39:07.0403630Z rstudioapi (NA -> 0.13 ) [CRAN] 2021-05-16T01:39:07.0404934Z credentials (NA -> 1.3.0 ) [CRAN] 2021-05-16T01:39:07.0406190Z fastmap (NA -> 1.1.0 ) [CRAN] 2021-05-16T01:39:07.0407365Z yaml (NA -> 2.2.1 ) [CRAN] 2021-05-16T01:39:07.0408510Z withr (NA -> 2.4.2 ) [CRAN] 2021-05-16T01:39:07.0409700Z whisker (NA -> 0.4 ) [CRAN] 2021-05-16T01:39:07.0412734Z rappdirs (NA -> 0.3.3 ) [CRAN] 2021-05-16T01:39:07.0414033Z purrr (NA -> 0.3.4 ) [CRAN] 2021-05-16T01:39:07.0415253Z lifecycle (NA -> 1.0.0 ) [CRAN] 2021-05-16T01:39:07.0416465Z gh (NA -> 1.3.0 ) [CRAN] 2021-05-16T01:39:07.0417628Z gert (NA -> 1.3.0 ) [CRAN] 2021-05-16T01:39:07.0418763Z fs (NA -> 1.5.0 ) [CRAN] 2021-05-16T01:39:07.0419928Z clipr (NA -> 0.7.1 ) [CRAN] 2021-05-16T01:39:07.0421114Z cachem (NA -> 1.0.5 ) [CRAN] 2021-05-16T01:39:07.0422322Z usethis (NA -> 2.0.1 ) [CRAN] 2021-05-16T01:39:07.0425278Z memoise (NA -> 2.0.0 ) [CRAN] 2021-05-16T01:39:07.0426488Z git2r (NA -> 0.28.0) [CRAN] 2021-05-16T01:39:07.0429882Z Installing 31 packages: rlang, magrittr, glue, sys, askpass, openssl, mime, curl, jsonlite, ini, httr, gitcreds, cli, zip, rstudioapi, credentials, fastmap, yaml, withr, whisker, rappdirs, purrr, lifecycle, gh, gert, fs, clipr, cachem, usethis, memoise, git2r 2021-05-16T01:39:07.0433254Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T01:39:07.0435101Z (as ‘lib’ is unspecified) 2021-05-16T01:39:21.6740719Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rlang_0.4.11.tar.gz' 2021-05-16T01:39:22.3883775Z Content type 'binary/octet-stream' length 859995 bytes (839 KB) 2021-05-16T01:39:22.6138612Z ================================================== 2021-05-16T01:39:22.6139657Z downloaded 839 KB 2021-05-16T01:39:22.6140385Z 2021-05-16T01:39:22.6178720Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/magrittr_2.0.1.tar.gz' 2021-05-16T01:39:24.0228344Z Content type 'binary/octet-stream' length 264532 bytes (258 KB) 2021-05-16T01:39:24.1607659Z ================================================== 2021-05-16T01:39:24.1609627Z downloaded 258 KB 2021-05-16T01:39:24.1610533Z 2021-05-16T01:39:24.1645860Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/glue_1.4.2.tar.gz' 2021-05-16T01:39:24.8460248Z Content type 'binary/octet-stream' length 100043 bytes (97 KB) 2021-05-16T01:39:24.9117825Z ================================================== 2021-05-16T01:39:24.9118722Z downloaded 97 KB 2021-05-16T01:39:24.9119212Z 2021-05-16T01:39:24.9160635Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sys_3.4.tar.gz' 2021-05-16T01:39:28.2235627Z Content type 'binary/octet-stream' length 20291 bytes (19 KB) 2021-05-16T01:39:28.2334098Z ================================================== 2021-05-16T01:39:28.2335135Z downloaded 19 KB 2021-05-16T01:39:28.2335701Z 2021-05-16T01:39:28.2372824Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/askpass_1.1.tar.gz' 2021-05-16T01:39:29.6950227Z Content type 'application/x-tar' length 5688 bytes 2021-05-16T01:39:29.6952831Z ================================================== 2021-05-16T01:39:29.6954740Z downloaded 5688 bytes 2021-05-16T01:39:29.6955556Z 2021-05-16T01:39:29.7005737Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/openssl_1.4.4.tar.gz' 2021-05-16T01:39:31.8658536Z Content type 'binary/octet-stream' length 1311683 bytes (1.3 MB) 2021-05-16T01:39:32.0552467Z ================================================== 2021-05-16T01:39:32.0553471Z downloaded 1.3 MB 2021-05-16T01:39:32.0554090Z 2021-05-16T01:39:32.0594480Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/mime_0.10.tar.gz' 2021-05-16T01:39:33.1161091Z Content type 'binary/octet-stream' length 12958 bytes (12 KB) 2021-05-16T01:39:33.1162380Z ================================================== 2021-05-16T01:39:33.1163201Z downloaded 12 KB 2021-05-16T01:39:33.1163747Z 2021-05-16T01:39:33.1219765Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/curl_4.3.1.tar.gz' 2021-05-16T01:39:33.7790087Z Content type 'binary/octet-stream' length 798588 bytes (779 KB) 2021-05-16T01:39:33.9451036Z ================================================== 2021-05-16T01:39:33.9451980Z downloaded 779 KB 2021-05-16T01:39:33.9452462Z 2021-05-16T01:39:33.9489970Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/jsonlite_1.7.2.tar.gz' 2021-05-16T01:39:34.6987884Z Content type 'binary/octet-stream' length 422264 bytes (412 KB) 2021-05-16T01:39:34.8335971Z ================================================== 2021-05-16T01:39:34.8337633Z downloaded 412 KB 2021-05-16T01:39:34.8338415Z 2021-05-16T01:39:34.8376149Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ini_0.3.1.tar.gz' 2021-05-16T01:39:35.5211288Z Content type 'application/x-tar' length 3475 bytes 2021-05-16T01:39:35.5213118Z ================================================== 2021-05-16T01:39:35.5214201Z downloaded 3475 bytes 2021-05-16T01:39:35.5214951Z 2021-05-16T01:39:35.5257842Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/httr_1.4.2.tar.gz' 2021-05-16T01:39:36.1864505Z Content type 'binary/octet-stream' length 159877 bytes (156 KB) 2021-05-16T01:39:36.2713047Z ================================================== 2021-05-16T01:39:36.2714895Z downloaded 156 KB 2021-05-16T01:39:36.2715656Z 2021-05-16T01:39:36.2754453Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gitcreds_0.1.1.tar.gz' 2021-05-16T01:39:36.9726540Z Content type 'binary/octet-stream' length 62129 bytes (60 KB) 2021-05-16T01:39:37.0267186Z ================================================== 2021-05-16T01:39:37.0268239Z downloaded 60 KB 2021-05-16T01:39:37.0268884Z 2021-05-16T01:39:37.0313918Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cli_2.5.0.tar.gz' 2021-05-16T01:39:39.4866612Z Content type 'binary/octet-stream' length 158132 bytes (154 KB) 2021-05-16T01:39:39.5721945Z ================================================== 2021-05-16T01:39:39.5723461Z downloaded 154 KB 2021-05-16T01:39:39.5724337Z 2021-05-16T01:39:39.5767347Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/zip_2.1.1.tar.gz' 2021-05-16T01:39:41.3968313Z Content type 'binary/octet-stream' length 113091 bytes (110 KB) 2021-05-16T01:39:41.4440390Z ================================================== 2021-05-16T01:39:41.4441275Z downloaded 110 KB 2021-05-16T01:39:41.4443688Z 2021-05-16T01:39:41.4493955Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rstudioapi_0.13.tar.gz' 2021-05-16T01:39:42.0174717Z Content type 'binary/octet-stream' length 109870 bytes (107 KB) 2021-05-16T01:39:42.0892246Z ================================================== 2021-05-16T01:39:42.0893260Z downloaded 107 KB 2021-05-16T01:39:42.0893820Z 2021-05-16T01:39:42.0957111Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/credentials_1.3.0.tar.gz' 2021-05-16T01:39:43.1311769Z Content type 'binary/octet-stream' length 230676 bytes (225 KB) 2021-05-16T01:39:43.2335177Z ================================================== 2021-05-16T01:39:43.2336228Z downloaded 225 KB 2021-05-16T01:39:43.2336952Z 2021-05-16T01:39:43.2387768Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fastmap_1.1.0.tar.gz' 2021-05-16T01:39:46.4694347Z Content type 'binary/octet-stream' length 44517 bytes (43 KB) 2021-05-16T01:39:46.5037472Z ================================================== 2021-05-16T01:39:46.5038812Z downloaded 43 KB 2021-05-16T01:39:46.5039561Z 2021-05-16T01:39:46.5078886Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/yaml_2.2.1.tar.gz' 2021-05-16T01:39:46.9440251Z Content type 'binary/octet-stream' length 92979 bytes (90 KB) 2021-05-16T01:39:46.9959255Z ================================================== 2021-05-16T01:39:46.9960665Z downloaded 90 KB 2021-05-16T01:39:46.9961708Z 2021-05-16T01:39:47.0021780Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/withr_2.4.2.tar.gz' 2021-05-16T01:39:47.4396140Z Content type 'binary/octet-stream' length 95150 bytes (92 KB) 2021-05-16T01:39:47.4893325Z ================================================== 2021-05-16T01:39:47.4894302Z downloaded 92 KB 2021-05-16T01:39:47.4894832Z 2021-05-16T01:39:47.4951718Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/whisker_0.4.tar.gz' 2021-05-16T01:39:48.1570904Z Content type 'application/x-tar' length 28675 bytes (28 KB) 2021-05-16T01:39:48.1572279Z ================================================== 2021-05-16T01:39:48.1573116Z downloaded 28 KB 2021-05-16T01:39:48.1573668Z 2021-05-16T01:39:48.1637147Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rappdirs_0.3.3.tar.gz' 2021-05-16T01:39:48.7101188Z Content type 'binary/octet-stream' length 12326 bytes (12 KB) 2021-05-16T01:39:48.7102494Z ================================================== 2021-05-16T01:39:48.7103359Z downloaded 12 KB 2021-05-16T01:39:48.7103903Z 2021-05-16T01:39:48.7157414Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/purrr_0.3.4.tar.gz' 2021-05-16T01:39:49.5349291Z Content type 'binary/octet-stream' length 373001 bytes (364 KB) 2021-05-16T01:39:49.6596015Z ================================================== 2021-05-16T01:39:49.6597281Z downloaded 364 KB 2021-05-16T01:39:49.6597941Z 2021-05-16T01:39:49.6637543Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lifecycle_1.0.0.tar.gz' 2021-05-16T01:39:50.2112769Z Content type 'binary/octet-stream' length 83493 bytes (81 KB) 2021-05-16T01:39:50.2600285Z ================================================== 2021-05-16T01:39:50.2601500Z downloaded 81 KB 2021-05-16T01:39:50.2602369Z 2021-05-16T01:39:50.2659665Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gh_1.3.0.tar.gz' 2021-05-16T01:39:50.9222463Z Content type 'binary/octet-stream' length 45853 bytes (44 KB) 2021-05-16T01:39:51.7612591Z ================================================== 2021-05-16T01:39:51.7614201Z downloaded 44 KB 2021-05-16T01:39:51.7614996Z 2021-05-16T01:39:51.7618558Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gert_1.3.0.tar.gz' 2021-05-16T01:39:52.9575851Z Content type 'binary/octet-stream' length 66528 bytes (64 KB) 2021-05-16T01:39:53.0107969Z ================================================== 2021-05-16T01:39:53.0109648Z downloaded 64 KB 2021-05-16T01:39:53.0110614Z 2021-05-16T01:39:53.0162265Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fs_1.5.0.tar.gz' 2021-05-16T01:39:53.6521262Z Content type 'binary/octet-stream' length 800044 bytes (781 KB) 2021-05-16T01:39:53.8345915Z ================================================== 2021-05-16T01:39:53.8347674Z downloaded 781 KB 2021-05-16T01:39:53.8349021Z 2021-05-16T01:39:53.8387031Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/clipr_0.7.1.tar.gz' 2021-05-16T01:39:55.2453789Z Content type 'binary/octet-stream' length 20919 bytes (20 KB) 2021-05-16T01:39:55.2455086Z ================================================== 2021-05-16T01:39:55.2455914Z downloaded 20 KB 2021-05-16T01:39:55.2456465Z 2021-05-16T01:39:55.2505453Z trying URL 'https://cloud.r-project.org/src/contrib/cachem_1.0.5.tar.gz' 2021-05-16T01:39:55.5420202Z Content type 'application/x-gzip' length 24974 bytes (24 KB) 2021-05-16T01:39:55.5491754Z ================================================== 2021-05-16T01:39:55.5492266Z downloaded 24 KB 2021-05-16T01:39:55.5492564Z 2021-05-16T01:39:55.5521388Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/usethis_2.0.1.tar.gz' 2021-05-16T01:39:56.3143319Z Content type 'binary/octet-stream' length 304209 bytes (297 KB) 2021-05-16T01:39:56.4313437Z ================================================== 2021-05-16T01:39:56.4314254Z downloaded 297 KB 2021-05-16T01:39:56.4314606Z 2021-05-16T01:39:56.4360821Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/memoise_2.0.0.tar.gz' 2021-05-16T01:39:57.0003474Z Content type 'binary/octet-stream' length 17411 bytes (17 KB) 2021-05-16T01:39:57.0132020Z ================================================== 2021-05-16T01:39:57.0132804Z downloaded 17 KB 2021-05-16T01:39:57.0133218Z 2021-05-16T01:39:57.0180654Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/git2r_0.28.0.tar.gz' 2021-05-16T01:39:58.1274054Z Content type 'binary/octet-stream' length 1223574 bytes (1.2 MB) 2021-05-16T01:39:58.3168524Z ================================================== 2021-05-16T01:39:58.3169256Z downloaded 1.2 MB 2021-05-16T01:39:58.3169622Z 2021-05-16T01:39:58.8392003Z * installing *source* package ‘rlang’ ... 2021-05-16T01:39:58.8533293Z ** package ‘rlang’ successfully unpacked and MD5 sums checked 2021-05-16T01:39:58.8535526Z ** using staged installation 2021-05-16T01:39:58.8723717Z ** libs 2021-05-16T01:39:58.8814754Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c capture.c -o capture.o 2021-05-16T01:39:59.1524724Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c export.c -o export.o 2021-05-16T01:39:59.5110293Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c internal.c -o internal.o 2021-05-16T01:40:02.0004242Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c lib.c -o lib.o 2021-05-16T01:40:03.0804602Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-16T01:40:03.1227823Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o version.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:40:03.1735398Z installing to /home/runner/work/_temp/Library/00LOCK-rlang/00new/rlang/libs 2021-05-16T01:40:03.1762420Z ** R 2021-05-16T01:40:03.2253230Z ** inst 2021-05-16T01:40:03.2262181Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:40:06.5929770Z ** help 2021-05-16T01:40:07.2899427Z *** installing help indices 2021-05-16T01:40:07.5691698Z *** copying figures 2021-05-16T01:40:07.5697199Z ** building package indices 2021-05-16T01:40:08.0599987Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:40:08.3228256Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:40:08.4161211Z ** testing if installed package can be loaded from final location 2021-05-16T01:40:08.6941735Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:40:08.6980347Z * DONE (rlang) 2021-05-16T01:40:08.9624560Z * installing *source* package ‘magrittr’ ... 2021-05-16T01:40:08.9651695Z ** package ‘magrittr’ successfully unpacked and MD5 sums checked 2021-05-16T01:40:08.9653718Z ** using staged installation 2021-05-16T01:40:08.9777232Z ** libs 2021-05-16T01:40:08.9826063Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pipe.c -o pipe.o 2021-05-16T01:40:09.1135715Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T01:40:09.1707156Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o magrittr.so pipe.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:40:09.1963024Z installing to /home/runner/work/_temp/Library/00LOCK-magrittr/00new/magrittr/libs 2021-05-16T01:40:09.1975657Z ** R 2021-05-16T01:40:09.2017189Z ** inst 2021-05-16T01:40:09.2032586Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:40:09.4981283Z ** help 2021-05-16T01:40:09.5395868Z *** installing help indices 2021-05-16T01:40:09.5695935Z *** copying figures 2021-05-16T01:40:09.5698095Z ** building package indices 2021-05-16T01:40:09.7855068Z ** installing vignettes 2021-05-16T01:40:09.7918118Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:40:09.9780776Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:40:09.9975090Z ** testing if installed package can be loaded from final location 2021-05-16T01:40:10.1907663Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:40:10.1914779Z * DONE (magrittr) 2021-05-16T01:40:10.4429624Z * installing *source* package ‘glue’ ... 2021-05-16T01:40:10.4451584Z ** package ‘glue’ successfully unpacked and MD5 sums checked 2021-05-16T01:40:10.4453610Z ** using staged installation 2021-05-16T01:40:10.4614045Z ** libs 2021-05-16T01:40:10.4673852Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c glue.c -o glue.o 2021-05-16T01:40:10.5914675Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:40:10.6363271Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c trim.c -o trim.o 2021-05-16T01:40:10.7251874Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o glue.so glue.o init.o trim.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:40:10.7478982Z installing to /home/runner/work/_temp/Library/00LOCK-glue/00new/glue/libs 2021-05-16T01:40:10.7493360Z ** R 2021-05-16T01:40:10.7546501Z ** inst 2021-05-16T01:40:10.7558131Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:40:11.2165048Z ** help 2021-05-16T01:40:11.2461169Z *** installing help indices 2021-05-16T01:40:11.2748301Z *** copying figures 2021-05-16T01:40:11.2751742Z ** building package indices 2021-05-16T01:40:11.4740893Z ** installing vignettes 2021-05-16T01:40:11.4798512Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:40:11.6974265Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:40:11.7161471Z ** testing if installed package can be loaded from final location 2021-05-16T01:40:11.9519235Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:40:11.9532874Z * DONE (glue) 2021-05-16T01:40:12.1814103Z * installing *source* package ‘sys’ ... 2021-05-16T01:40:12.1828253Z ** package ‘sys’ successfully unpacked and MD5 sums checked 2021-05-16T01:40:12.1830029Z ** using staged installation 2021-05-16T01:40:12.2035564Z ** libs 2021-05-16T01:40:12.2088013Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c exec.c -o exec.o 2021-05-16T01:40:12.4714314Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:40:12.5203786Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o sys.so exec.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:40:12.5476050Z installing to /home/runner/work/_temp/Library/00LOCK-sys/00new/sys/libs 2021-05-16T01:40:12.5483452Z ** R 2021-05-16T01:40:12.5519252Z ** inst 2021-05-16T01:40:12.5527341Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:40:12.8363995Z ** help 2021-05-16T01:40:12.8577946Z *** installing help indices 2021-05-16T01:40:12.8785400Z ** building package indices 2021-05-16T01:40:13.0810580Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:40:13.2644882Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:40:13.2854914Z ** testing if installed package can be loaded from final location 2021-05-16T01:40:13.4697411Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:40:13.4707380Z * DONE (sys) 2021-05-16T01:40:13.6773109Z * installing *source* package ‘mime’ ... 2021-05-16T01:40:13.6781945Z ** package ‘mime’ successfully unpacked and MD5 sums checked 2021-05-16T01:40:13.6783754Z ** using staged installation 2021-05-16T01:40:13.6906684Z ** libs 2021-05-16T01:40:13.6956711Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:40:13.7412382Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rawmatch.c -o rawmatch.o 2021-05-16T01:40:13.7969994Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o mime.so init.o rawmatch.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:40:13.8115965Z installing to /home/runner/work/_temp/Library/00LOCK-mime/00new/mime/libs 2021-05-16T01:40:13.8131244Z ** R 2021-05-16T01:40:13.8184632Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:40:14.1424992Z ** help 2021-05-16T01:40:14.1640228Z *** installing help indices 2021-05-16T01:40:14.1789759Z ** building package indices 2021-05-16T01:40:14.3702884Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:40:14.5516981Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:40:14.5704252Z ** testing if installed package can be loaded from final location 2021-05-16T01:40:14.7495863Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:40:14.7507405Z * DONE (mime) 2021-05-16T01:40:15.0953110Z * installing *source* package ‘curl’ ... 2021-05-16T01:40:15.1028181Z ** package ‘curl’ successfully unpacked and MD5 sums checked 2021-05-16T01:40:15.1030112Z ** using staged installation 2021-05-16T01:40:15.1126989Z Found pkg-config cflags and libs! 2021-05-16T01:40:15.2003462Z Using PKG_CFLAGS=-I/usr/include/x86_64-linux-gnu 2021-05-16T01:40:15.2004682Z Using PKG_LIBS=-lcurl 2021-05-16T01:40:15.2532764Z ** libs 2021-05-16T01:40:15.2588483Z rm -f curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o 2021-05-16T01:40:15.2615808Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c callbacks.c -o callbacks.o 2021-05-16T01:40:15.3383668Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c curl.c -o curl.o 2021-05-16T01:40:15.4688876Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c download.c -o download.o 2021-05-16T01:40:15.5583988Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c escape.c -o escape.o 2021-05-16T01:40:15.6179793Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fetch.c -o fetch.o 2021-05-16T01:40:15.7218450Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c form.c -o form.o 2021-05-16T01:40:15.7908550Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c getdate.c -o getdate.o 2021-05-16T01:40:15.8503447Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c handle.c -o handle.o 2021-05-16T01:40:16.1778226Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ieproxy.c -o ieproxy.o 2021-05-16T01:40:16.2197087Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:40:16.2780362Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c interrupt.c -o interrupt.o 2021-05-16T01:40:16.3476112Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c multi.c -o multi.o 2021-05-16T01:40:16.5262870Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c nslookup.c -o nslookup.o 2021-05-16T01:40:17.2698113Z installing to /home/runner/work/_temp/Library/00LOCK-curl/00new/curl/libs 2021-05-16T01:40:17.2701532Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c reflist.c -o reflist.o 2021-05-16T01:40:17.2704541Z ** R 2021-05-16T01:40:17.2707522Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c split.c -o split.o 2021-05-16T01:40:17.2710449Z ** inst 2021-05-16T01:40:17.2713209Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ssl.c -o ssl.o 2021-05-16T01:40:17.2717211Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:40:17.2720632Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typechecking.c -o typechecking.o 2021-05-16T01:40:17.2725376Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T01:40:17.2729585Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-16T01:40:17.2733686Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c winidn.c -o winidn.o 2021-05-16T01:40:17.2738607Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c writer.c -o writer.o 2021-05-16T01:40:17.2743937Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o -lcurl -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:40:17.6055032Z ** help 2021-05-16T01:40:17.6555580Z *** installing help indices 2021-05-16T01:40:17.6886276Z ** building package indices 2021-05-16T01:40:17.9154955Z ** installing vignettes 2021-05-16T01:40:17.9225172Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:40:18.1196298Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:40:18.1387661Z ** testing if installed package can be loaded from final location 2021-05-16T01:40:18.3258360Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:40:18.3269988Z * DONE (curl) 2021-05-16T01:40:18.6439823Z * installing *source* package ‘jsonlite’ ... 2021-05-16T01:40:18.6495596Z ** package ‘jsonlite’ successfully unpacked and MD5 sums checked 2021-05-16T01:40:18.6497436Z ** using staged installation 2021-05-16T01:40:18.6631478Z ** libs 2021-05-16T01:40:18.6696857Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T01:40:18.7400147Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_array.c -o collapse_array.o 2021-05-16T01:40:18.7974430Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_object.c -o collapse_object.o 2021-05-16T01:40:18.8682466Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_pretty.c -o collapse_pretty.o 2021-05-16T01:40:18.9778981Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c escape_chars.c -o escape_chars.o 2021-05-16T01:40:19.0527285Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c integer64_to_na.c -o integer64_to_na.o 2021-05-16T01:40:19.1049603Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_datelist.c -o is_datelist.o 2021-05-16T01:40:19.1543154Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_recordlist.c -o is_recordlist.o 2021-05-16T01:40:19.2148726Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_scalarlist.c -o is_scalarlist.o 2021-05-16T01:40:19.2674111Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c modp_numtoa.c -o modp_numtoa.o 2021-05-16T01:40:19.4018285Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c null_to_na.c -o null_to_na.o 2021-05-16T01:40:19.4703370Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c num_to_char.c -o num_to_char.o 2021-05-16T01:40:19.5521822Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c parse.c -o parse.o 2021-05-16T01:40:19.6239115Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c prettify.c -o prettify.o 2021-05-16T01:40:19.6884121Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c push_parser.c -o push_parser.o 2021-05-16T01:40:19.7510388Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c r-base64.c -o r-base64.o 2021-05-16T01:40:19.8043211Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c register.c -o register.o 2021-05-16T01:40:19.8487427Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c row_collapse.c -o row_collapse.o 2021-05-16T01:40:19.9126285Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c transpose_list.c -o transpose_list.o 2021-05-16T01:40:19.9650249Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c validate.c -o validate.o 2021-05-16T01:40:20.0183248Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl.c -o yajl/yajl.o 2021-05-16T01:40:20.0862485Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o 2021-05-16T01:40:20.1196790Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_buf.c -o yajl/yajl_buf.o 2021-05-16T01:40:20.1740010Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_encode.c -o yajl/yajl_encode.o 2021-05-16T01:40:20.2803517Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_gen.c -o yajl/yajl_gen.o 2021-05-16T01:40:20.5352527Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_lex.c -o yajl/yajl_lex.o 2021-05-16T01:40:20.8052577Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_parser.c -o yajl/yajl_parser.o 2021-05-16T01:40:20.9749299Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_tree.c -o yajl/yajl_tree.o 2021-05-16T01:40:21.1184736Z ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o 2021-05-16T01:40:21.1292850Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:40:21.1595830Z installing to /home/runner/work/_temp/Library/00LOCK-jsonlite/00new/jsonlite/libs 2021-05-16T01:40:21.1602359Z ** R 2021-05-16T01:40:21.1763555Z ** inst 2021-05-16T01:40:21.1781278Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:40:22.1328757Z in method for ‘asJSON’ with signature ‘"blob"’: no definition for class “blob” 2021-05-16T01:40:22.1330916Z ** help 2021-05-16T01:40:22.1658790Z *** installing help indices 2021-05-16T01:40:22.1933481Z ** building package indices 2021-05-16T01:40:22.4114640Z ** installing vignettes 2021-05-16T01:40:22.4132950Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:40:22.6132002Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:40:22.6361269Z ** testing if installed package can be loaded from final location 2021-05-16T01:40:22.8435052Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:40:22.8436411Z * DONE (jsonlite) 2021-05-16T01:40:23.0507817Z * installing *source* package ‘ini’ ... 2021-05-16T01:40:23.0515452Z ** package ‘ini’ successfully unpacked and MD5 sums checked 2021-05-16T01:40:23.0517122Z ** using staged installation 2021-05-16T01:40:23.0625627Z ** R 2021-05-16T01:40:23.0654322Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:40:23.3224684Z ** help 2021-05-16T01:40:23.3362009Z *** installing help indices 2021-05-16T01:40:23.3600368Z ** building package indices 2021-05-16T01:40:23.5515177Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:40:23.7348953Z ** testing if installed package can be loaded from final location 2021-05-16T01:40:23.9143780Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:40:23.9148297Z * DONE (ini) 2021-05-16T01:40:24.1546030Z * installing *source* package ‘gitcreds’ ... 2021-05-16T01:40:24.1565288Z ** package ‘gitcreds’ successfully unpacked and MD5 sums checked 2021-05-16T01:40:24.1567528Z ** using staged installation 2021-05-16T01:40:24.1675920Z ** R 2021-05-16T01:40:24.1735044Z ** inst 2021-05-16T01:40:24.1744867Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:40:24.6354696Z ** help 2021-05-16T01:40:24.6594624Z *** installing help indices 2021-05-16T01:40:24.6810914Z ** building package indices 2021-05-16T01:40:24.8794735Z ** installing vignettes 2021-05-16T01:40:24.8822463Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:40:25.0618559Z ** testing if installed package can be loaded from final location 2021-05-16T01:40:25.2456817Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:40:25.2464527Z * DONE (gitcreds) 2021-05-16T01:40:25.5031758Z * installing *source* package ‘zip’ ... 2021-05-16T01:40:25.5059312Z ** package ‘zip’ successfully unpacked and MD5 sums checked 2021-05-16T01:40:25.5060526Z ** using staged installation 2021-05-16T01:40:25.5156345Z ** libs 2021-05-16T01:40:25.5209284Z gcc -g -O2 miniz.c zip.c unixutils.c tools/cmdzip.c -o tools/cmdzip 2021-05-16T01:40:28.2931760Z gcc -g -O2 miniz.c zip.c unixutils.c tools/cmdunzip.c -o tools/cmdunzip 2021-05-16T01:40:31.0505561Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:40:31.0984045Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c miniz.c -o miniz.o 2021-05-16T01:40:33.5735757Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rzip.c -o rzip.o 2021-05-16T01:40:33.6682477Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c zip.c -o zip.o 2021-05-16T01:40:33.7960293Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unixutils.c -o unixutils.o 2021-05-16T01:40:33.8581372Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o zip.so init.o miniz.o rzip.o zip.o unixutils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:40:33.8876518Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-zip/00new/zip 2021-05-16T01:40:33.8899661Z ** R 2021-05-16T01:40:33.8937719Z ** inst 2021-05-16T01:40:33.8946549Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:40:34.2114455Z ** help 2021-05-16T01:40:34.2325815Z *** installing help indices 2021-05-16T01:40:34.2562719Z ** building package indices 2021-05-16T01:40:34.4485605Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:40:34.6315655Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:40:34.6512626Z ** testing if installed package can be loaded from final location 2021-05-16T01:40:34.8292346Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:40:34.8299061Z * DONE (zip) 2021-05-16T01:40:35.1109477Z * installing *source* package ‘rstudioapi’ ... 2021-05-16T01:40:35.1151444Z ** package ‘rstudioapi’ successfully unpacked and MD5 sums checked 2021-05-16T01:40:35.1152804Z ** using staged installation 2021-05-16T01:40:35.1278387Z ** R 2021-05-16T01:40:35.1374771Z ** inst 2021-05-16T01:40:35.1391379Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:40:35.6394283Z ** help 2021-05-16T01:40:35.8032587Z *** installing help indices 2021-05-16T01:40:35.9148986Z *** copying figures 2021-05-16T01:40:35.9150816Z ** building package indices 2021-05-16T01:40:36.2154710Z ** installing vignettes 2021-05-16T01:40:36.2223351Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:40:36.4085889Z ** testing if installed package can be loaded from final location 2021-05-16T01:40:36.5957416Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:40:36.5973913Z * DONE (rstudioapi) 2021-05-16T01:40:36.8183850Z * installing *source* package ‘fastmap’ ... 2021-05-16T01:40:36.8201006Z ** package ‘fastmap’ successfully unpacked and MD5 sums checked 2021-05-16T01:40:36.8203178Z ** using staged installation 2021-05-16T01:40:36.8363533Z ** libs 2021-05-16T01:40:36.8421433Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilib/ -I/usr/local/include -DR_NO_REMAP -fpic -g -O2 -c fastmap.cpp -o fastmap.o 2021-05-16T01:40:38.9898208Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilib/ -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:40:39.0369106Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fastmap.so fastmap.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:40:39.1040353Z installing to /home/runner/work/_temp/Library/00LOCK-fastmap/00new/fastmap/libs 2021-05-16T01:40:39.1059421Z ** R 2021-05-16T01:40:39.1109107Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:40:39.5043402Z ** help 2021-05-16T01:40:39.5228605Z *** installing help indices 2021-05-16T01:40:39.5415118Z ** building package indices 2021-05-16T01:40:39.7241257Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:40:39.9091793Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:40:39.9290826Z ** testing if installed package can be loaded from final location 2021-05-16T01:40:40.1061176Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:40:40.1068166Z * DONE (fastmap) 2021-05-16T01:40:40.3525996Z * installing *source* package ‘yaml’ ... 2021-05-16T01:40:40.3553811Z ** package ‘yaml’ successfully unpacked and MD5 sums checked 2021-05-16T01:40:40.3555971Z ** using staged installation 2021-05-16T01:40:40.3649565Z ** libs 2021-05-16T01:40:40.3716586Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api.c -o api.o 2021-05-16T01:40:40.7000710Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dumper.c -o dumper.o 2021-05-16T01:40:40.8092430Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c emitter.c -o emitter.o 2021-05-16T01:40:41.7155911Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c implicit.c -o implicit.o 2021-05-16T01:40:41.8803966Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c loader.c -o loader.o 2021-05-16T01:40:42.0105735Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c parser.c -o parser.o 2021-05-16T01:40:42.3810440Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_emit.c -o r_emit.o 2021-05-16T01:40:42.6656808Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_ext.c -o r_ext.o 2021-05-16T01:40:42.7662161Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_parse.c -o r_parse.o 2021-05-16T01:40:43.1890027Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reader.c -o reader.o 2021-05-16T01:40:43.2999841Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c scanner.c -o scanner.o 2021-05-16T01:40:44.6013618Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c writer.c -o writer.o 2021-05-16T01:40:44.6643813Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o yaml.so api.o dumper.o emitter.o implicit.o loader.o parser.o r_emit.o r_ext.o r_parse.o reader.o scanner.o writer.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:40:44.6951784Z installing to /home/runner/work/_temp/Library/00LOCK-yaml/00new/yaml/libs 2021-05-16T01:40:44.6971541Z ** R 2021-05-16T01:40:44.7002398Z ** inst 2021-05-16T01:40:44.7017276Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:40:44.9457020Z ** help 2021-05-16T01:40:44.9675231Z *** installing help indices 2021-05-16T01:40:44.9920259Z ** building package indices 2021-05-16T01:40:45.1902658Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:40:45.3733121Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:40:45.3928748Z ** testing if installed package can be loaded from final location 2021-05-16T01:40:45.5729642Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:40:45.5735503Z * DONE (yaml) 2021-05-16T01:40:45.8442478Z * installing *source* package ‘withr’ ... 2021-05-16T01:40:45.8469696Z ** package ‘withr’ successfully unpacked and MD5 sums checked 2021-05-16T01:40:45.8471483Z ** using staged installation 2021-05-16T01:40:45.8632338Z ** R 2021-05-16T01:40:45.8720034Z ** inst 2021-05-16T01:40:45.8729608Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:40:46.5034551Z ** help 2021-05-16T01:40:46.5848326Z *** installing help indices 2021-05-16T01:40:46.6399006Z *** copying figures 2021-05-16T01:40:46.6401671Z ** building package indices 2021-05-16T01:40:46.8794508Z ** installing vignettes 2021-05-16T01:40:46.8854539Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:40:47.0738317Z ** testing if installed package can be loaded from final location 2021-05-16T01:40:47.2710511Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:40:47.2722558Z * DONE (withr) 2021-05-16T01:40:47.5103545Z * installing *source* package ‘whisker’ ... 2021-05-16T01:40:47.5119584Z ** package ‘whisker’ successfully unpacked and MD5 sums checked 2021-05-16T01:40:47.5121485Z ** using staged installation 2021-05-16T01:40:47.5207565Z ** R 2021-05-16T01:40:47.5249262Z ** inst 2021-05-16T01:40:47.5267236Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:40:47.9314465Z ** help 2021-05-16T01:40:47.9524090Z *** installing help indices 2021-05-16T01:40:47.9762597Z ** building package indices 2021-05-16T01:40:48.1877430Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:40:48.3700371Z ** testing if installed package can be loaded from final location 2021-05-16T01:40:48.5537958Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:40:48.5546082Z * DONE (whisker) 2021-05-16T01:40:48.7760962Z * installing *source* package ‘rappdirs’ ... 2021-05-16T01:40:48.7772306Z ** package ‘rappdirs’ successfully unpacked and MD5 sums checked 2021-05-16T01:40:48.7774163Z ** using staged installation 2021-05-16T01:40:48.8002045Z ** libs 2021-05-16T01:40:48.8056325Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:40:48.8549058Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c win-path.c -o win-path.o 2021-05-16T01:40:48.9061187Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rappdirs.so init.o win-path.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:40:48.9222830Z installing to /home/runner/work/_temp/Library/00LOCK-rappdirs/00new/rappdirs/libs 2021-05-16T01:40:48.9236117Z ** R 2021-05-16T01:40:48.9281265Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:40:49.2417278Z ** help 2021-05-16T01:40:49.2676505Z *** installing help indices 2021-05-16T01:40:49.2901893Z ** building package indices 2021-05-16T01:40:50.2794872Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:40:50.2797086Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:40:50.2798800Z ** testing if installed package can be loaded from final location 2021-05-16T01:40:50.2800640Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:40:50.2801960Z * DONE (rappdirs) 2021-05-16T01:40:50.3878146Z * installing *source* package ‘fs’ ... 2021-05-16T01:40:50.4017657Z ** package ‘fs’ successfully unpacked and MD5 sums checked 2021-05-16T01:40:50.4018799Z ** using staged installation 2021-05-16T01:40:50.4179382Z ** libs 2021-05-16T01:40:50.4257003Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c id.cc -o id.o 2021-05-16T01:40:50.9950187Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c file.cc -o file.o 2021-05-16T01:40:51.4362766Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c path.cc -o path.o 2021-05-16T01:40:51.8422875Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c fs.cc -o fs.o 2021-05-16T01:40:51.9266225Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c link.cc -o link.o 2021-05-16T01:40:52.2475406Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c utils.cc -o utils.o 2021-05-16T01:40:52.5721216Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c init.cc -o init.o 2021-05-16T01:40:52.6652476Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c dir.cc -o dir.o 2021-05-16T01:40:53.1214072Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c getmode.cc -o getmode.o 2021-05-16T01:40:53.4197435Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c error.cc -o error.o 2021-05-16T01:40:53.5260623Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c unix/getmode.cc -o unix/getmode.o 2021-05-16T01:40:53.8349574Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/setmode.c -o bsd/setmode.o 2021-05-16T01:40:53.9632035Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/strmode.c -o bsd/strmode.o 2021-05-16T01:40:54.0059795Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/reallocarray.c -o bsd/reallocarray.o 2021-05-16T01:40:54.0379845Z (cd libuv-1.38.1 \ 2021-05-16T01:40:54.0381284Z && CC="gcc" CFLAGS="-g -O2 -I/usr/local/include -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" LDFLAGS="-L/usr/local/lib" ./configure --quiet) 2021-05-16T01:40:58.8672206Z make --directory=libuv-1.38.1 \ 2021-05-16T01:40:58.8672725Z HAVE_DTRACE=0 2021-05-16T01:40:58.8776577Z make[1]: Entering directory '/tmp/RtmpzJfvdS/R.INSTALL78f8332742a6/fs/src/libuv-1.38.1' 2021-05-16T01:40:58.8872687Z CC src/libuv_la-fs-poll.lo 2021-05-16T01:40:59.5165951Z CC src/libuv_la-idna.lo 2021-05-16T01:41:00.1761512Z CC src/libuv_la-inet.lo 2021-05-16T01:41:00.8466817Z CC src/libuv_la-random.lo 2021-05-16T01:41:01.3921075Z CC src/libuv_la-strscpy.lo 2021-05-16T01:41:01.9221960Z CC src/libuv_la-threadpool.lo 2021-05-16T01:41:02.6243640Z CC src/libuv_la-timer.lo 2021-05-16T01:41:03.2738863Z CC src/libuv_la-uv-data-getter-setters.lo 2021-05-16T01:41:03.8125544Z CC src/libuv_la-uv-common.lo 2021-05-16T01:41:04.8970778Z CC src/libuv_la-version.lo 2021-05-16T01:41:05.3914923Z CC src/unix/libuv_la-async.lo 2021-05-16T01:41:06.0267199Z CC src/unix/libuv_la-core.lo 2021-05-16T01:41:07.1820136Z CC src/unix/libuv_la-dl.lo 2021-05-16T01:41:07.7166016Z CC src/unix/libuv_la-fs.lo 2021-05-16T01:41:09.2943387Z CC src/unix/libuv_la-getaddrinfo.lo 2021-05-16T01:41:09.9021856Z CC src/unix/libuv_la-getnameinfo.lo 2021-05-16T01:41:10.4629961Z CC src/unix/libuv_la-loop-watcher.lo 2021-05-16T01:41:11.0907357Z CC src/unix/libuv_la-loop.lo 2021-05-16T01:41:11.7014817Z CC src/unix/libuv_la-pipe.lo 2021-05-16T01:41:12.3854678Z CC src/unix/libuv_la-poll.lo 2021-05-16T01:41:12.9731097Z CC src/unix/libuv_la-process.lo 2021-05-16T01:41:13.7589037Z CC src/unix/libuv_la-random-devurandom.lo 2021-05-16T01:41:14.3083726Z CC src/unix/libuv_la-signal.lo 2021-05-16T01:41:15.2214977Z CC src/unix/libuv_la-stream.lo 2021-05-16T01:41:16.3091162Z CC src/unix/libuv_la-tcp.lo 2021-05-16T01:41:16.9846796Z CC src/unix/libuv_la-thread.lo 2021-05-16T01:41:17.7328495Z CC src/unix/libuv_la-tty.lo 2021-05-16T01:41:18.3591430Z CC src/unix/libuv_la-udp.lo 2021-05-16T01:41:19.4127577Z CC src/unix/libuv_la-linux-core.lo 2021-05-16T01:41:20.4875665Z CC src/unix/libuv_la-linux-inotify.lo 2021-05-16T01:41:21.3509699Z CC src/unix/libuv_la-linux-syscalls.lo 2021-05-16T01:41:21.8261990Z CC src/unix/libuv_la-procfs-exepath.lo 2021-05-16T01:41:22.3602022Z CC src/unix/libuv_la-proctitle.lo 2021-05-16T01:41:22.9349663Z CC src/unix/libuv_la-random-getrandom.lo 2021-05-16T01:41:23.4706459Z CC src/unix/libuv_la-random-sysctl-linux.lo 2021-05-16T01:41:24.0186989Z CCLD libuv.la 2021-05-16T01:41:24.2310710Z ar: `u' modifier ignored since `D' is the default (see `U') 2021-05-16T01:41:24.2637432Z make[1]: Leaving directory '/tmp/RtmpzJfvdS/R.INSTALL78f8332742a6/fs/src/libuv-1.38.1' 2021-05-16T01:41:24.2657056Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fs.so id.o file.o path.o fs.o link.o utils.o init.o dir.o getmode.o error.o unix/getmode.o bsd/setmode.o bsd/strmode.o bsd/reallocarray.o ./libuv-1.38.1/.libs/libuv.a -pthread -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:41:24.3539614Z installing to /home/runner/work/_temp/Library/00LOCK-fs/00new/fs/libs 2021-05-16T01:41:24.3570016Z ** R 2021-05-16T01:41:24.3675266Z ** inst 2021-05-16T01:41:24.3686277Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:41:25.3025988Z ** help 2021-05-16T01:41:25.3726402Z *** installing help indices 2021-05-16T01:41:25.4237369Z ** building package indices 2021-05-16T01:41:25.6608533Z ** installing vignettes 2021-05-16T01:41:25.6717732Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:41:25.9011153Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:41:25.9209672Z ** testing if installed package can be loaded from final location 2021-05-16T01:41:26.1566618Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:41:26.1576443Z * DONE (fs) 2021-05-16T01:41:26.3851290Z * installing *source* package ‘clipr’ ... 2021-05-16T01:41:26.3862275Z ** package ‘clipr’ successfully unpacked and MD5 sums checked 2021-05-16T01:41:26.3864092Z ** using staged installation 2021-05-16T01:41:26.4053283Z ** R 2021-05-16T01:41:26.4093547Z ** inst 2021-05-16T01:41:26.4102856Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:41:26.7225547Z ** help 2021-05-16T01:41:26.7426687Z *** installing help indices 2021-05-16T01:41:26.7630384Z ** building package indices 2021-05-16T01:41:26.9476408Z ** installing vignettes 2021-05-16T01:41:26.9529530Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:41:27.1321350Z ** testing if installed package can be loaded from final location 2021-05-16T01:41:27.3079445Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:41:27.3089829Z * DONE (clipr) 2021-05-16T01:41:28.0019946Z * installing *source* package ‘git2r’ ... 2021-05-16T01:41:28.0262605Z ** package ‘git2r’ successfully unpacked and MD5 sums checked 2021-05-16T01:41:28.0264259Z ** using staged installation 2021-05-16T01:41:28.2162887Z checking build system type... x86_64-unknown-linux-gnu 2021-05-16T01:41:28.2164102Z checking host system type... x86_64-unknown-linux-gnu 2021-05-16T01:41:28.2179181Z checking for gcc... gcc 2021-05-16T01:41:28.2756940Z checking whether the C compiler works... yes 2021-05-16T01:41:28.2758444Z checking for C compiler default output file name... a.out 2021-05-16T01:41:28.3108805Z checking for suffix of executables... 2021-05-16T01:41:28.3498611Z checking whether we are cross compiling... no 2021-05-16T01:41:28.3724744Z checking for suffix of object files... o 2021-05-16T01:41:28.3935450Z checking whether we are using the GNU C compiler... yes 2021-05-16T01:41:28.4147538Z checking whether gcc accepts -g... yes 2021-05-16T01:41:28.4526883Z checking for gcc option to accept ISO C89... none needed 2021-05-16T01:41:28.4540680Z checking for pkg-config... /usr/bin/pkg-config 2021-05-16T01:41:28.4556966Z checking pkg-config is at least version 0.9.0... yes 2021-05-16T01:41:28.4700850Z Found pkg-config cflags and libs! 2021-05-16T01:41:28.5666357Z checking whether the libgit2 version will work in git2r... yes 2021-05-16T01:41:28.6909919Z checking whether the libgit2 function git_buf_dispose is available... yes 2021-05-16T01:41:28.8133481Z checking whether the libgit2 constant GIT_OBJECT_ANY is available... yes 2021-05-16T01:41:28.9372156Z checking whether the libgit2 function git_error_last is available... yes 2021-05-16T01:41:29.0467042Z checking whether the libgit2 function git_oid_is_zero is available... no 2021-05-16T01:41:29.0470060Z ----- Results of the git2r package configure ----- 2021-05-16T01:41:29.0470742Z 2021-05-16T01:41:29.0471881Z PKG_CFLAGS: -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR 2021-05-16T01:41:29.0472881Z PKG_LIBS: -lgit2 2021-05-16T01:41:29.0473334Z 2021-05-16T01:41:29.0474429Z -------------------------------------------------- 2021-05-16T01:41:29.0700157Z configure: creating ./config.status 2021-05-16T01:41:29.1467650Z config.status: creating src/Makevars 2021-05-16T01:41:29.2016874Z ** libs 2021-05-16T01:41:29.2077145Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r.c -o git2r.o 2021-05-16T01:41:29.2724943Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_S3.c -o git2r_S3.o 2021-05-16T01:41:29.3236933Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_arg.c -o git2r_arg.o 2021-05-16T01:41:29.4781571Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_blame.c -o git2r_blame.o 2021-05-16T01:41:29.5721856Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_blob.c -o git2r_blob.o 2021-05-16T01:41:29.6952181Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_branch.c -o git2r_branch.o 2021-05-16T01:41:29.9360909Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_checkout.c -o git2r_checkout.o 2021-05-16T01:41:30.0338259Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_clone.c -o git2r_clone.o 2021-05-16T01:41:30.1329632Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_commit.c -o git2r_commit.o 2021-05-16T01:41:30.2871595Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_config.c -o git2r_config.o 2021-05-16T01:41:30.4678620Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_cred.c -o git2r_cred.o 2021-05-16T01:41:30.5649341Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_diff.c -o git2r_diff.o 2021-05-16T01:41:30.8347145Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_error.c -o git2r_error.o 2021-05-16T01:41:30.9034133Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_graph.c -o git2r_graph.o 2021-05-16T01:41:30.9895957Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_index.c -o git2r_index.o 2021-05-16T01:41:31.0777334Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_libgit2.c -o git2r_libgit2.o 2021-05-16T01:41:31.7885723Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_merge.c -o git2r_merge.o 2021-05-16T01:41:31.7888608Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_note.c -o git2r_note.o 2021-05-16T01:41:31.7890822Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_object.c -o git2r_object.o 2021-05-16T01:41:31.7892953Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_odb.c -o git2r_odb.o 2021-05-16T01:41:31.7895186Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_oid.c -o git2r_oid.o 2021-05-16T01:41:31.7897524Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_push.c -o git2r_push.o 2021-05-16T01:41:31.8419141Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reference.c -o git2r_reference.o 2021-05-16T01:41:31.9372341Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reflog.c -o git2r_reflog.o 2021-05-16T01:41:32.0236392Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_remote.c -o git2r_remote.o 2021-05-16T01:41:32.2034211Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_repository.c -o git2r_repository.o 2021-05-16T01:41:32.3644167Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reset.c -o git2r_reset.o 2021-05-16T01:41:32.4494566Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_revparse.c -o git2r_revparse.o 2021-05-16T01:41:32.5307999Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_revwalk.c -o git2r_revwalk.o 2021-05-16T01:41:32.7040596Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_signature.c -o git2r_signature.o 2021-05-16T01:41:32.7826363Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_stash.c -o git2r_stash.o 2021-05-16T01:41:32.8981567Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_status.c -o git2r_status.o 2021-05-16T01:41:33.0636271Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_tag.c -o git2r_tag.o 2021-05-16T01:41:33.1944475Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_transfer.c -o git2r_transfer.o 2021-05-16T01:41:33.2581565Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_tree.c -o git2r_tree.o 2021-05-16T01:41:33.3715772Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o git2r.so git2r.o git2r_S3.o git2r_arg.o git2r_blame.o git2r_blob.o git2r_branch.o git2r_checkout.o git2r_clone.o git2r_commit.o git2r_config.o git2r_cred.o git2r_diff.o git2r_error.o git2r_graph.o git2r_index.o git2r_libgit2.o git2r_merge.o git2r_note.o git2r_object.o git2r_odb.o git2r_oid.o git2r_push.o git2r_reference.o git2r_reflog.o git2r_remote.o git2r_repository.o git2r_reset.o git2r_revparse.o git2r_revwalk.o git2r_signature.o git2r_stash.o git2r_status.o git2r_tag.o git2r_transfer.o git2r_tree.o -lgit2 -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:41:33.4125915Z installing to /home/runner/work/_temp/Library/00LOCK-git2r/00new/git2r/libs 2021-05-16T01:41:33.4143773Z ** R 2021-05-16T01:41:33.4342121Z ** inst 2021-05-16T01:41:33.4351796Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:41:34.3279632Z ** help 2021-05-16T01:41:34.5627190Z *** installing help indices 2021-05-16T01:41:34.7286629Z ** building package indices 2021-05-16T01:41:35.0518437Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:41:35.2615141Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:41:35.2802058Z ** testing if installed package can be loaded from final location 2021-05-16T01:41:35.4835139Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:41:35.4844716Z * DONE (git2r) 2021-05-16T01:41:35.6992174Z * installing *source* package ‘askpass’ ... 2021-05-16T01:41:35.7001803Z ** package ‘askpass’ successfully unpacked and MD5 sums checked 2021-05-16T01:41:35.7004021Z ** using staged installation 2021-05-16T01:41:35.7148375Z ** libs 2021-05-16T01:41:35.7207865Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c askpass.c -o askpass.o 2021-05-16T01:41:35.7762904Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o askpass.so askpass.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:41:35.8016447Z installing to /home/runner/work/_temp/Library/00LOCK-askpass/00new/askpass/libs 2021-05-16T01:41:35.8032017Z ** R 2021-05-16T01:41:35.8060650Z ** inst 2021-05-16T01:41:35.8068805Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:41:36.0681427Z ** help 2021-05-16T01:41:36.0861599Z *** installing help indices 2021-05-16T01:41:36.1013612Z ** building package indices 2021-05-16T01:41:36.2941953Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:41:36.4712592Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:41:36.4901304Z ** testing if installed package can be loaded from final location 2021-05-16T01:41:36.6667703Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:41:36.6668580Z * DONE (askpass) 2021-05-16T01:41:37.0065970Z * installing *source* package ‘cli’ ... 2021-05-16T01:41:37.0123045Z ** package ‘cli’ successfully unpacked and MD5 sums checked 2021-05-16T01:41:37.0124183Z ** using staged installation 2021-05-16T01:41:37.0293682Z ** R 2021-05-16T01:41:37.0582363Z ** inst 2021-05-16T01:41:37.0595502Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:41:39.4401846Z ** help 2021-05-16T01:41:39.6301893Z *** installing help indices 2021-05-16T01:41:39.7420103Z *** copying figures 2021-05-16T01:41:39.7423924Z ** building package indices 2021-05-16T01:41:40.0545992Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:41:40.2846251Z ** testing if installed package can be loaded from final location 2021-05-16T01:41:40.5521986Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:41:40.5555012Z * DONE (cli) 2021-05-16T01:41:40.8764705Z * installing *source* package ‘purrr’ ... 2021-05-16T01:41:40.8818760Z ** package ‘purrr’ successfully unpacked and MD5 sums checked 2021-05-16T01:41:40.8820232Z ** using staged installation 2021-05-16T01:41:40.8978221Z ** libs 2021-05-16T01:41:40.9045814Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c backports.c -o backports.o 2021-05-16T01:41:40.9451079Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-05-16T01:41:41.0373749Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c conditions.c -o conditions.o 2021-05-16T01:41:41.1312439Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c flatten.c -o flatten.o 2021-05-16T01:41:41.2408630Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:41:41.2865228Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c map.c -o map.o 2021-05-16T01:41:41.4146260Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pluck.c -o pluck.o 2021-05-16T01:41:41.5411499Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c transpose.c -o transpose.o 2021-05-16T01:41:41.6253470Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T01:41:41.6771595Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o purrr.so backports.o coerce.o conditions.o flatten.o init.o map.o pluck.o transpose.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:41:41.7035963Z installing to /home/runner/work/_temp/Library/00LOCK-purrr/00new/purrr/libs 2021-05-16T01:41:41.7036975Z ** R 2021-05-16T01:41:41.7186797Z ** inst 2021-05-16T01:41:41.7196292Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:41:42.8918510Z ** help 2021-05-16T01:41:43.0514032Z *** installing help indices 2021-05-16T01:41:43.1455752Z *** copying figures 2021-05-16T01:41:43.1460256Z ** building package indices 2021-05-16T01:41:43.4202560Z ** installing vignettes 2021-05-16T01:41:43.4284395Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:41:43.6277324Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:41:43.6455340Z ** testing if installed package can be loaded from final location 2021-05-16T01:41:43.8575913Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:41:43.8589899Z * DONE (purrr) 2021-05-16T01:41:44.1280007Z * installing *source* package ‘lifecycle’ ... 2021-05-16T01:41:44.1307743Z ** package ‘lifecycle’ successfully unpacked and MD5 sums checked 2021-05-16T01:41:44.1308781Z ** using staged installation 2021-05-16T01:41:44.1454186Z ** R 2021-05-16T01:41:44.1505049Z ** inst 2021-05-16T01:41:44.1517370Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:41:44.5354198Z ** help 2021-05-16T01:41:44.5677617Z *** installing help indices 2021-05-16T01:41:44.5916541Z *** copying figures 2021-05-16T01:41:44.5920763Z ** building package indices 2021-05-16T01:41:44.7994759Z ** installing vignettes 2021-05-16T01:41:44.8039721Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:41:45.0127818Z ** testing if installed package can be loaded from final location 2021-05-16T01:41:45.2031617Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:41:45.2041359Z * DONE (lifecycle) 2021-05-16T01:41:45.4168765Z * installing *source* package ‘cachem’ ... 2021-05-16T01:41:45.4186209Z ** package ‘cachem’ successfully unpacked and MD5 sums checked 2021-05-16T01:41:45.4189694Z ** using staged installation 2021-05-16T01:41:45.4327887Z ** libs 2021-05-16T01:41:45.4382077Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cache.c -o cache.o 2021-05-16T01:41:45.4912913Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:41:45.5362210Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o cachem.so cache.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:41:45.5570148Z installing to /home/runner/work/_temp/Library/00LOCK-cachem/00new/cachem/libs 2021-05-16T01:41:45.5585103Z ** R 2021-05-16T01:41:45.5714936Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:41:46.0879483Z ** help 2021-05-16T01:41:46.1101766Z *** installing help indices 2021-05-16T01:41:46.1293759Z ** building package indices 2021-05-16T01:41:46.3387264Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:41:46.5374565Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:41:46.5560199Z ** testing if installed package can be loaded from final location 2021-05-16T01:41:46.7630938Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:41:46.7641552Z * DONE (cachem) 2021-05-16T01:41:47.2031767Z * installing *source* package ‘openssl’ ... 2021-05-16T01:41:47.2173749Z ** package ‘openssl’ successfully unpacked and MD5 sums checked 2021-05-16T01:41:47.2177111Z ** using staged installation 2021-05-16T01:41:47.2358983Z Found pkg-config cflags and libs! 2021-05-16T01:41:47.3225201Z Using PKG_CFLAGS= 2021-05-16T01:41:48.0362881Z Using PKG_LIBS=-l:libssl.so.1.1 -l:libcrypto.so.1.1 2021-05-16T01:41:48.0540928Z ** libs 2021-05-16T01:41:48.0603948Z rm -f aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o openssl.so bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o 2021-05-16T01:41:48.0631672Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o 2021-05-16T01:41:48.1560420Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T01:41:48.2401080Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bignum.c -o bignum.o 2021-05-16T01:41:48.3490140Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cert.c -o cert.o 2021-05-16T01:41:48.5048658Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c compatibility.c -o compatibility.o 2021-05-16T01:41:48.5692740Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffie.c -o diffie.o 2021-05-16T01:41:48.6670546Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c envelope.c -o envelope.o 2021-05-16T01:41:48.7880166Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error.c -o error.o 2021-05-16T01:41:48.8461314Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c hash.c -o hash.o 2021-05-16T01:41:48.9480726Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c info.c -o info.o 2021-05-16T01:41:49.0177578Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keygen.c -o keygen.o 2021-05-16T01:41:49.1248553Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keys.c -o keys.o 2021-05-16T01:41:49.2644497Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c onload.c -o onload.o 2021-05-16T01:41:49.3499496Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c openssh.c -o openssh.o 2021-05-16T01:41:49.5468281Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c password.c -o password.o 2021-05-16T01:41:49.6080731Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pbkdf.c -o pbkdf.o 2021-05-16T01:41:49.6528626Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pem.c -o pem.o 2021-05-16T01:41:49.7925844Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs12.c -o pkcs12.o 2021-05-16T01:41:49.9429400Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs7.c -o pkcs7.o 2021-05-16T01:41:50.0704888Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rand.c -o rand.o 2021-05-16T01:41:50.1226740Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rsa.c -o rsa.o 2021-05-16T01:41:50.2306123Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signing.c -o signing.o 2021-05-16T01:41:50.3499402Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c ssl.c -o ssl.o 2021-05-16T01:41:50.5041952Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stream.c -o stream.o 2021-05-16T01:41:50.6285521Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write.c -o write.o 2021-05-16T01:41:50.7669972Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c x25519.c -o x25519.o 2021-05-16T01:41:50.9011874Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bcrypt/bcrypt_pbkdf.c -o bcrypt/bcrypt_pbkdf.o 2021-05-16T01:41:50.9753204Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bcrypt/blowfish.c -o bcrypt/blowfish.o 2021-05-16T01:41:51.1633227Z ar rcs bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o 2021-05-16T01:41:51.1689946Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o openssl.so aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o -Lbcrypt -lstatbcrypt -l:libssl.so.1.1 -l:libcrypto.so.1.1 -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:41:51.2277503Z installing to /home/runner/work/_temp/Library/00LOCK-openssl/00new/openssl/libs 2021-05-16T01:41:51.2279635Z ** R 2021-05-16T01:41:51.2381277Z ** inst 2021-05-16T01:41:51.2432092Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:41:52.1405054Z ** help 2021-05-16T01:41:52.1960451Z *** installing help indices 2021-05-16T01:41:52.2328845Z ** building package indices 2021-05-16T01:41:52.4634708Z ** installing vignettes 2021-05-16T01:41:52.4793960Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:41:52.6695728Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:41:52.6888676Z ** testing if installed package can be loaded from final location 2021-05-16T01:41:52.8906634Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:41:52.8925121Z * DONE (openssl) 2021-05-16T01:41:53.1071937Z * installing *source* package ‘memoise’ ... 2021-05-16T01:41:53.1088338Z ** package ‘memoise’ successfully unpacked and MD5 sums checked 2021-05-16T01:41:53.1091713Z ** using staged installation 2021-05-16T01:41:53.1242460Z ** R 2021-05-16T01:41:53.1342730Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:41:53.5394564Z ** help 2021-05-16T01:41:53.5641046Z *** installing help indices 2021-05-16T01:41:53.5907945Z ** building package indices 2021-05-16T01:41:53.8011879Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:41:54.0006178Z ** testing if installed package can be loaded from final location 2021-05-16T01:41:54.1976875Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:41:54.1987943Z * DONE (memoise) 2021-05-16T01:41:54.4999080Z * installing *source* package ‘httr’ ... 2021-05-16T01:41:54.5050462Z ** package ‘httr’ successfully unpacked and MD5 sums checked 2021-05-16T01:41:54.5051740Z ** using staged installation 2021-05-16T01:41:54.5196408Z ** R 2021-05-16T01:41:54.5360228Z ** demo 2021-05-16T01:41:54.5369568Z ** inst 2021-05-16T01:41:54.5383466Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:41:56.8909866Z ** help 2021-05-16T01:41:57.0434723Z *** installing help indices 2021-05-16T01:41:57.1387536Z ** building package indices 2021-05-16T01:41:57.4179774Z ** installing vignettes 2021-05-16T01:41:57.4249193Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:41:57.6015574Z ** testing if installed package can be loaded from final location 2021-05-16T01:41:57.8228246Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:41:57.8258551Z * DONE (httr) 2021-05-16T01:41:58.0534280Z * installing *source* package ‘credentials’ ... 2021-05-16T01:41:58.0555087Z ** package ‘credentials’ successfully unpacked and MD5 sums checked 2021-05-16T01:41:58.0557121Z ** using staged installation 2021-05-16T01:41:58.0684396Z ** R 2021-05-16T01:41:58.0731124Z ** inst 2021-05-16T01:41:58.0741742Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:41:58.5066172Z ** help 2021-05-16T01:41:58.5253177Z *** installing help indices 2021-05-16T01:41:58.5466313Z ** building package indices 2021-05-16T01:41:58.7341461Z ** installing vignettes 2021-05-16T01:41:58.7410963Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:41:59.0792560Z ** testing if installed package can be loaded from final location 2021-05-16T01:41:59.3166718Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:41:59.3174326Z * DONE (credentials) 2021-05-16T01:41:59.5509692Z * installing *source* package ‘gh’ ... 2021-05-16T01:41:59.5529329Z ** package ‘gh’ successfully unpacked and MD5 sums checked 2021-05-16T01:41:59.5530380Z ** using staged installation 2021-05-16T01:41:59.5678610Z ** R 2021-05-16T01:41:59.5758176Z ** inst 2021-05-16T01:41:59.5766736Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:42:00.5794687Z ** help 2021-05-16T01:42:00.6059476Z *** installing help indices 2021-05-16T01:42:00.6348087Z ** building package indices 2021-05-16T01:42:00.8434663Z ** installing vignettes 2021-05-16T01:42:00.8436034Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:42:01.0935661Z ** testing if installed package can be loaded from final location 2021-05-16T01:42:01.3578053Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:42:01.3590414Z * DONE (gh) 2021-05-16T01:42:01.6323592Z * installing *source* package ‘gert’ ... 2021-05-16T01:42:01.6350980Z ** package ‘gert’ successfully unpacked and MD5 sums checked 2021-05-16T01:42:01.6352343Z ** using staged installation 2021-05-16T01:42:01.6460338Z Found pkg-config cflags and libs! 2021-05-16T01:42:01.7356762Z Using PKG_CFLAGS= 2021-05-16T01:42:01.7358379Z Using PKG_LIBS=-lgit2 2021-05-16T01:42:01.7747146Z Configuration OK! 2021-05-16T01:42:01.7911390Z ** libs 2021-05-16T01:42:01.7972047Z rm -f gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o 2021-05-16T01:42:01.8014409Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c branch.c -o branch.o 2021-05-16T01:42:02.0282735Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c clone.c -o clone.o 2021-05-16T01:42:02.2751807Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c commit.c -o commit.o 2021-05-16T01:42:02.5060197Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c config.c -o config.o 2021-05-16T01:42:02.5890730Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c conflicts.c -o conflicts.o 2021-05-16T01:42:02.6621254Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c files.c -o files.o 2021-05-16T01:42:02.8123862Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:42:02.8782669Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c merge.c -o merge.o 2021-05-16T01:42:02.9825947Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rebase.c -o rebase.o 2021-05-16T01:42:03.0964464Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c stash.c -o stash.o 2021-05-16T01:42:03.1868618Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c submodules.c -o submodules.o 2021-05-16T01:42:03.3040443Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c tag.c -o tag.o 2021-05-16T01:42:03.3874900Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T01:42:03.5107090Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-16T01:42:03.5816644Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o -lgit2 -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:42:03.6151407Z installing to /home/runner/work/_temp/Library/00LOCK-gert/00new/gert/libs 2021-05-16T01:42:03.6153270Z ** R 2021-05-16T01:42:03.6208245Z ** inst 2021-05-16T01:42:03.6218130Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:42:04.3314689Z ** help 2021-05-16T01:42:04.3892114Z *** installing help indices 2021-05-16T01:42:04.4305795Z ** building package indices 2021-05-16T01:42:04.6439208Z ** installing vignettes 2021-05-16T01:42:04.6537694Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:42:04.8691273Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:42:04.8875383Z ** testing if installed package can be loaded from final location 2021-05-16T01:42:05.1307013Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:42:05.1317894Z * DONE (gert) 2021-05-16T01:42:05.5266408Z * installing *source* package ‘usethis’ ... 2021-05-16T01:42:05.5344714Z ** package ‘usethis’ successfully unpacked and MD5 sums checked 2021-05-16T01:42:05.5346664Z ** using staged installation 2021-05-16T01:42:05.5570727Z ** R 2021-05-16T01:42:05.5890356Z ** inst 2021-05-16T01:42:05.5922610Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:42:08.1851474Z ** help 2021-05-16T01:42:08.3958512Z *** installing help indices 2021-05-16T01:42:08.5296142Z *** copying figures 2021-05-16T01:42:08.5301365Z ** building package indices 2021-05-16T01:42:08.8452930Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:42:09.1315593Z ** testing if installed package can be loaded from final location 2021-05-16T01:42:09.4681926Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:42:09.4713226Z * DONE (usethis) 2021-05-16T01:42:09.4825786Z 2021-05-16T01:42:09.4826816Z The downloaded source packages are in 2021-05-16T01:42:09.4828297Z ‘/tmp/RtmplAXmpW/downloaded_packages’ 2021-05-16T01:42:09.4829165Z Running `R CMD build`... 2021-05-16T01:42:11.6933210Z * checking for file ‘/tmp/RtmplAXmpW/remotes72425c217c19/ropensci-tic-3b4dfb8/DESCRIPTION’ ... OK 2021-05-16T01:42:11.6934802Z * preparing ‘tic’: 2021-05-16T01:42:11.6935839Z * checking DESCRIPTION meta-information ... OK 2021-05-16T01:42:11.6936879Z * installing the package to process help pages 2021-05-16T01:42:11.6938128Z * checking for LF line-endings in source and make files and shell scripts 2021-05-16T01:42:11.6939123Z * checking for empty or unneeded directories 2021-05-16T01:42:11.6940149Z Removed empty directory ‘tic/.circleci’ 2021-05-16T01:42:11.6941277Z Removed empty directory ‘tic/pkgdown’ 2021-05-16T01:42:11.6942070Z * building ‘tic_0.10.0.tar.gz’ 2021-05-16T01:42:11.6943881Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T01:42:11.6944809Z (as ‘lib’ is unspecified) 2021-05-16T01:42:12.0312871Z * installing *source* package ‘tic’ ... 2021-05-16T01:42:12.0334719Z ** using staged installation 2021-05-16T01:42:12.0583598Z ** R 2021-05-16T01:42:12.0787393Z ** inst 2021-05-16T01:42:12.0821407Z ** preparing package for lazy loading 2021-05-16T01:42:12.4714644Z ** help 2021-05-16T01:42:12.6242655Z *** installing help indices 2021-05-16T01:42:12.7177457Z *** copying figures 2021-05-16T01:42:12.7181604Z ** building package indices 2021-05-16T01:42:12.9954700Z ** installing vignettes 2021-05-16T01:42:12.9996760Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:42:13.2764485Z ** testing if installed package can be loaded from final location 2021-05-16T01:42:13.5931140Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:42:13.5960989Z * DONE (tic) 2021-05-16T01:42:13.6091088Z Using github PAT from envvar GITHUB_PAT 2021-05-16T01:42:13.7962800Z Downloading GitHub repo muschellij2/ghtravis@HEAD 2021-05-16T01:42:14.7395461Z desc (1.3.0 -> 7be86f2f7...) [GitHub] 2021-05-16T01:42:14.7400025Z Installing 37 packages: utf8, vctrs, pkgconfig, pillar, tibble, rematch2, fansi, diffobj, waldo, ps, processx, praise, pkgload, evaluate, ellipsis, digest, callr, brio, xml2, xfun, markdown, highr, stringr, stringi, Rcpp, knitr, commonmark, brew, xopen, sessioninfo, prettyunits, pkgbuild, testthat, rversions, roxygen2, rcmdcheck, devtools 2021-05-16T01:42:14.7404980Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T01:42:14.7406517Z (as ‘lib’ is unspecified) 2021-05-16T01:42:14.7410380Z utf8 (NA -> 1.2.1 ) [CRAN] 2021-05-16T01:42:14.7415951Z vctrs (NA -> 0.3.8 ) [CRAN] 2021-05-16T01:42:14.7417255Z pkgconfig (NA -> 2.0.3 ) [CRAN] 2021-05-16T01:42:14.7418589Z pillar (NA -> 1.6.0 ) [CRAN] 2021-05-16T01:42:14.7419878Z tibble (NA -> 3.1.1 ) [CRAN] 2021-05-16T01:42:14.7421193Z rematch2 (NA -> 2.1.2 ) [CRAN] 2021-05-16T01:42:14.7422485Z fansi (NA -> 0.4.2 ) [CRAN] 2021-05-16T01:42:14.7423736Z diffobj (NA -> 0.3.4 ) [CRAN] 2021-05-16T01:42:14.7425093Z waldo (NA -> 0.2.5 ) [CRAN] 2021-05-16T01:42:14.7426317Z ps (NA -> 1.6.0 ) [CRAN] 2021-05-16T01:42:14.7427610Z processx (NA -> 3.5.2 ) [CRAN] 2021-05-16T01:42:14.7428896Z praise (NA -> 1.0.0 ) [CRAN] 2021-05-16T01:42:14.7430190Z pkgload (NA -> 1.2.1 ) [CRAN] 2021-05-16T01:42:14.7431499Z evaluate (NA -> 0.14 ) [CRAN] 2021-05-16T01:42:14.7432802Z ellipsis (NA -> 0.3.2 ) [CRAN] 2021-05-16T01:42:14.7434444Z digest (NA -> 0.6.27 ) [CRAN] 2021-05-16T01:42:14.7435704Z callr (NA -> 3.7.0 ) [CRAN] 2021-05-16T01:42:14.7436936Z brio (NA -> 1.1.2 ) [CRAN] 2021-05-16T01:42:14.7438165Z xml2 (NA -> 1.3.2 ) [CRAN] 2021-05-16T01:42:14.7439396Z xfun (NA -> 0.23 ) [CRAN] 2021-05-16T01:42:14.7440669Z markdown (NA -> 1.1 ) [CRAN] 2021-05-16T01:42:14.7441927Z highr (NA -> 0.9 ) [CRAN] 2021-05-16T01:42:14.7443194Z stringr (NA -> 1.4.0 ) [CRAN] 2021-05-16T01:42:14.7444457Z stringi (NA -> 1.6.1 ) [CRAN] 2021-05-16T01:42:14.7445732Z Rcpp (NA -> 1.0.6 ) [CRAN] 2021-05-16T01:42:14.7446981Z knitr (NA -> 1.33 ) [CRAN] 2021-05-16T01:42:14.7448263Z commonmark (NA -> 1.7 ) [CRAN] 2021-05-16T01:42:14.7449569Z brew (NA -> 1.0-6 ) [CRAN] 2021-05-16T01:42:14.7450798Z xopen (NA -> 1.0.0 ) [CRAN] 2021-05-16T01:42:14.7452118Z sessioninfo (NA -> 1.1.1 ) [CRAN] 2021-05-16T01:42:14.7453482Z prettyunits (NA -> 1.1.1 ) [CRAN] 2021-05-16T01:42:14.7454824Z pkgbuild (NA -> 1.2.0 ) [CRAN] 2021-05-16T01:42:14.7456132Z testthat (NA -> 3.0.2 ) [CRAN] 2021-05-16T01:42:14.7457677Z rversions (NA -> 2.0.2 ) [CRAN] 2021-05-16T01:42:14.7459044Z roxygen2 (NA -> 7.1.1 ) [CRAN] 2021-05-16T01:42:14.7460352Z rcmdcheck (NA -> 1.3.3 ) [CRAN] 2021-05-16T01:42:14.7461672Z devtools (NA -> 2.4.1 ) [CRAN] 2021-05-16T01:42:29.1669363Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/utf8_1.2.1.tar.gz' 2021-05-16T01:42:29.8535000Z Content type 'binary/octet-stream' length 237667 bytes (232 KB) 2021-05-16T01:42:29.9533523Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pillar_1.6.0.tar.gz' 2021-05-16T01:42:34.7262436Z Content type 'binary/octet-stream' length 1103143 bytes (1.1 MB) 2021-05-16T01:42:35.2102521Z ================================================== 2021-05-16T01:42:35.2103554Z downloaded 1.1 MB 2021-05-16T01:42:35.2104113Z 2021-05-16T01:42:35.2162363Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tibble_3.1.1.tar.gz' 2021-05-16T01:42:35.9694346Z Content type 'binary/octet-stream' length 690530 bytes (674 KB) 2021-05-16T01:42:36.1249991Z ================================================== 2021-05-16T01:42:36.1251213Z downloaded 674 KB 2021-05-16T01:42:36.1251790Z 2021-05-16T01:42:36.1294618Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rematch2_2.1.2.tar.gz' 2021-05-16T01:42:40.1400744Z Content type 'binary/octet-stream' length 13441 bytes (13 KB) 2021-05-16T01:42:40.1402053Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/waldo_0.2.5.tar.gz' 2021-05-16T01:42:44.5785787Z Content type 'binary/octet-stream' length 26261 bytes (25 KB) 2021-05-16T01:42:44.5848241Z ================================================== 2021-05-16T01:42:44.5848688Z downloaded 25 KB 2021-05-16T01:42:44.5848973Z 2021-05-16T01:42:44.5898841Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ps_1.6.0.tar.gz' 2021-05-16T01:42:46.8472264Z Content type 'binary/octet-stream' length 120042 bytes (117 KB) 2021-05-16T01:42:46.9189602Z ================================================== 2021-05-16T01:42:46.9190589Z downloaded 117 KB 2021-05-16T01:42:46.9191388Z 2021-05-16T01:42:46.9241279Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/processx_3.5.2.tar.gz' 2021-05-16T01:42:48.0741787Z Content type 'binary/octet-stream' length 141949 bytes (138 KB) 2021-05-16T01:42:48.1245063Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/evaluate_0.14.tar.gz' 2021-05-16T01:42:51.0214698Z Content type 'application/x-tar' length 23661 bytes (23 KB) 2021-05-16T01:42:51.0393167Z ================================================== 2021-05-16T01:42:51.0394147Z downloaded 23 KB 2021-05-16T01:42:51.0394571Z 2021-05-16T01:42:51.0434866Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ellipsis_0.3.2.tar.gz' 2021-05-16T01:42:51.7995235Z Content type 'binary/octet-stream' length 8130 bytes 2021-05-16T01:42:51.7996492Z ================================================== 2021-05-16T01:42:51.7997376Z downloaded 8130 bytes 2021-05-16T01:42:51.7997948Z 2021-05-16T01:42:51.8054538Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/digest_0.6.27.tar.gz' 2021-05-16T01:42:52.6495806Z Content type 'binary/octet-stream' length 164442 bytes (160 KB) 2021-05-16T01:42:52.7329608Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xml2_1.3.2.tar.gz' 2021-05-16T01:42:57.6748502Z Content type 'binary/octet-stream' length 272736 bytes (266 KB) 2021-05-16T01:42:57.7869508Z ================================================== 2021-05-16T01:42:57.7871155Z downloaded 266 KB 2021-05-16T01:42:57.7872015Z 2021-05-16T01:42:57.7921737Z trying URL 'https://cloud.r-project.org/src/contrib/xfun_0.23.tar.gz' 2021-05-16T01:42:58.0924621Z Content type 'application/x-gzip' length 111696 bytes (109 KB) 2021-05-16T01:42:58.1615666Z ================================================== 2021-05-16T01:42:58.1616661Z downloaded 109 KB 2021-05-16T01:42:58.1617219Z 2021-05-16T01:42:58.1663094Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/markdown_1.1.tar.gz' 2021-05-16T01:42:59.1716689Z Content type 'application/x-tar' length 81636 bytes (79 KB) 2021-05-16T01:42:59.2209980Z ================================================== 2021-05-16T01:42:59.2211007Z downloaded 79 KB 2021-05-16T01:42:59.2211668Z 2021-05-16T01:42:59.2264720Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/highr_0.9.tar.gz' 2021-05-16T01:43:04.8835237Z Content type 'binary/octet-stream' length 15361 bytes (15 KB) 2021-05-16T01:43:04.9020065Z ================================================== 2021-05-16T01:43:04.9020983Z downloaded 15 KB 2021-05-16T01:43:04.9021545Z 2021-05-16T01:43:04.9070206Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringr_1.4.0.tar.gz' 2021-05-16T01:43:07.2657157Z Content type 'application/x-tar' length 135526 bytes (132 KB) 2021-05-16T01:43:07.3162416Z ================================================== 2021-05-16T01:43:07.3163243Z downloaded 132 KB 2021-05-16T01:43:07.3163749Z 2021-05-16T01:43:07.3211197Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringi_1.6.1.tar.gz' 2021-05-16T01:43:08.6175042Z Content type 'binary/octet-stream' length 7574951 bytes (7.2 MB) 2021-05-16T01:43:08.9111600Z ================================================== 2021-05-16T01:43:08.9112385Z downloaded 7.2 MB 2021-05-16T01:43:08.9112734Z 2021-05-16T01:43:08.9146235Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/Rcpp_1.0.6.tar.gz' 2021-05-16T01:43:09.9190129Z Content type 'binary/octet-stream' length 2954251 bytes (2.8 MB) 2021-05-16T01:43:10.1621985Z ================================================== 2021-05-16T01:43:10.1623147Z downloaded 2.8 MB 2021-05-16T01:43:10.1623683Z 2021-05-16T01:43:10.1662904Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/knitr_1.33.tar.gz' 2021-05-16T01:43:10.9116871Z Content type 'binary/octet-stream' length 890176 bytes (869 KB) 2021-05-16T01:43:11.1082876Z ================================================== 2021-05-16T01:43:11.1084834Z downloaded 869 KB 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgbuild_1.2.0.tar.gz' 2021-05-16T01:43:21.4932474Z Content type 'binary/octet-stream' length 30622 bytes (29 KB) 2021-05-16T01:43:21.4933870Z ================================================== 2021-05-16T01:43:21.4934703Z downloaded 29 KB 2021-05-16T01:43:21.4935254Z 2021-05-16T01:43:21.4986689Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/testthat_3.0.2.tar.gz' 2021-05-16T01:43:22.1380458Z Content type 'binary/octet-stream' length 678280 bytes (662 KB) 2021-05-16T01:43:22.2970831Z ================================================== 2021-05-16T01:43:22.2973251Z downloaded 662 KB 2021-05-16T01:43:22.2974118Z 2021-05-16T01:43:22.3011720Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rversions_2.0.2.tar.gz' 2021-05-16T01:43:23.3582586Z Content type 'binary/octet-stream' length 40913 bytes (39 KB) 2021-05-16T01:43:23.3584956Z 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/devtools_2.4.1.tar.gz' 2021-05-16T01:43:29.9895988Z Content type 'binary/octet-stream' length 370450 bytes (361 KB) 2021-05-16T01:43:30.1151332Z ================================================== 2021-05-16T01:43:30.1151905Z downloaded 361 KB 2021-05-16T01:43:30.1152225Z 2021-05-16T01:43:30.4612690Z * installing *source* package ‘utf8’ ... 2021-05-16T01:43:30.4676834Z ** package ‘utf8’ successfully unpacked and MD5 sums checked 2021-05-16T01:43:30.4677857Z ** using staged installation 2021-05-16T01:43:30.4824719Z ** libs 2021-05-16T01:43:30.4901426Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c as_utf8.c -o as_utf8.o 2021-05-16T01:43:30.5595412Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c bytes.c -o bytes.o 2021-05-16T01:43:30.7101943Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c context.c -o context.o 2021-05-16T01:43:30.7773032Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:43:30.8215167Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c render.c -o render.o 2021-05-16T01:43:30.8895261Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c render_table.c -o render_table.o 2021-05-16T01:43:31.0588746Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c string.c -o string.o 2021-05-16T01:43:31.1264310Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c text.c -o text.o 2021-05-16T01:43:31.2628355Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_encode.c -o utf8_encode.o 2021-05-16T01:43:31.3490712Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_format.c -o utf8_format.o 2021-05-16T01:43:31.4421509Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_normalize.c -o utf8_normalize.o 2021-05-16T01:43:31.5123978Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_valid.c -o utf8_valid.o 2021-05-16T01:43:31.5777624Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_width.c -o utf8_width.o 2021-05-16T01:43:31.6388302Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c util.c -o util.o 2021-05-16T01:43:31.6998524Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/array.c -o utf8lite/src/array.o 2021-05-16T01:43:31.7541090Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/char.c -o utf8lite/src/char.o 2021-05-16T01:43:31.8242985Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/encode.c -o utf8lite/src/encode.o 2021-05-16T01:43:31.8839260Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/error.c -o utf8lite/src/error.o 2021-05-16T01:43:31.9221369Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/escape.c -o utf8lite/src/escape.o 2021-05-16T01:43:31.9871048Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/graph.c -o utf8lite/src/graph.o 2021-05-16T01:43:32.0319815Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o 2021-05-16T01:43:32.2480711Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o 2021-05-16T01:43:32.5670048Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/render.c -o utf8lite/src/render.o 2021-05-16T01:43:32.7412576Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/text.c -o utf8lite/src/text.o 2021-05-16T01:43:32.8182257Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o 2021-05-16T01:43:32.8809767Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o 2021-05-16T01:43:32.9576683Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o 2021-05-16T01:43:33.0288926Z ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o 2021-05-16T01:43:33.0366221Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:43:33.0716066Z installing to /home/runner/work/_temp/Library/00LOCK-utf8/00new/utf8/libs 2021-05-16T01:43:33.0717659Z ** R 2021-05-16T01:43:33.0788262Z ** inst 2021-05-16T01:43:33.0797222Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:43:33.5321945Z ** help 2021-05-16T01:43:33.5624423Z *** installing help indices 2021-05-16T01:43:33.5875041Z ** building package indices 2021-05-16T01:43:33.7914593Z ** installing vignettes 2021-05-16T01:43:33.7942192Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:43:33.9743539Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:43:33.9937429Z ** testing if installed package can be loaded from final location 2021-05-16T01:43:34.1795378Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:43:34.1802591Z * DONE (utf8) 2021-05-16T01:43:34.3926499Z * installing *source* package ‘pkgconfig’ ... 2021-05-16T01:43:34.3935618Z ** package ‘pkgconfig’ successfully unpacked and MD5 sums checked 2021-05-16T01:43:34.3937472Z ** using staged installation 2021-05-16T01:43:34.4054257Z ** R 2021-05-16T01:43:34.4082309Z ** inst 2021-05-16T01:43:34.4090145Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:43:34.6394665Z ** help 2021-05-16T01:43:34.6611207Z *** installing help indices 2021-05-16T01:43:34.6787283Z ** building package indices 2021-05-16T01:43:34.8691357Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:43:35.0408042Z ** testing if installed package can be loaded from final location 2021-05-16T01:43:35.2122835Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:43:35.2127525Z * DONE (pkgconfig) 2021-05-16T01:43:35.4895611Z * installing *source* package ‘fansi’ ... 2021-05-16T01:43:35.4931945Z ** package ‘fansi’ successfully unpacked and MD5 sums checked 2021-05-16T01:43:35.4933984Z ** using staged installation 2021-05-16T01:43:35.5053752Z ** libs 2021-05-16T01:43:35.5129126Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c assumptions.c -o assumptions.o 2021-05-16T01:43:35.5530125Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c has.c -o has.o 2021-05-16T01:43:35.6118426Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:43:35.6578642Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c nchar.c -o nchar.o 2021-05-16T01:43:35.7324221Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read.c -o read.o 2021-05-16T01:43:36.1863513Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rnchar.c -o rnchar.o 2021-05-16T01:43:36.2249569Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c state.c -o state.o 2021-05-16T01:43:36.6018249Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c strip.c -o strip.o 2021-05-16T01:43:36.7403545Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c strsplit.c -o strsplit.o 2021-05-16T01:43:36.7862889Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c tabs.c -o tabs.o 2021-05-16T01:43:36.9097119Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c tohtml.c -o tohtml.o 2021-05-16T01:43:37.1646708Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unhandled.c -o unhandled.o 2021-05-16T01:43:37.2758404Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unique.c -o unique.o 2021-05-16T01:43:37.3340574Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-16T01:43:37.3940225Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T01:43:37.5555084Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c wrap.c -o wrap.o 2021-05-16T01:43:37.8749557Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fansi.so assumptions.o has.o init.o nchar.o read.o rnchar.o state.o strip.o strsplit.o tabs.o tohtml.o unhandled.o unique.o utf8.o utils.o wrap.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:43:37.9046134Z installing to /home/runner/work/_temp/Library/00LOCK-fansi/00new/fansi/libs 2021-05-16T01:43:37.9062399Z ** R 2021-05-16T01:43:37.9164824Z ** inst 2021-05-16T01:43:38.8277643Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:43:38.8278895Z ** help 2021-05-16T01:43:38.8279437Z *** installing help indices 2021-05-16T01:43:38.8280010Z ** building package indices 2021-05-16T01:43:38.8280548Z ** installing vignettes 2021-05-16T01:43:38.8281296Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:43:39.0004095Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:43:39.0187757Z ** testing if installed package can be loaded from final location 2021-05-16T01:43:39.2125101Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:43:39.2134052Z * DONE (fansi) 2021-05-16T01:43:39.6394540Z * installing *source* package ‘diffobj’ ... 2021-05-16T01:43:39.6495740Z ** package ‘diffobj’ successfully unpacked and MD5 sums checked 2021-05-16T01:43:39.6497594Z ** using staged installation 2021-05-16T01:43:39.6649433Z ** libs 2021-05-16T01:43:39.6702897Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diff.c -o diff.o 2021-05-16T01:43:39.8776916Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffobj.c -o diffobj.o 2021-05-16T01:43:39.9365721Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:43:39.9828431Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o diffobj.so diff.o diffobj.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:43:40.0077927Z installing to /home/runner/work/_temp/Library/00LOCK-diffobj/00new/diffobj/libs 2021-05-16T01:43:40.0090846Z ** R 2021-05-16T01:43:40.0496444Z ** inst 2021-05-16T01:43:40.0514212Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:43:45.8973635Z ** help 2021-05-16T01:43:46.0860579Z *** installing help indices 2021-05-16T01:43:46.2184236Z ** building package indices 2021-05-16T01:43:46.5034817Z ** installing vignettes 2021-05-16T01:43:46.5089879Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:43:46.7999487Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:43:46.8175368Z ** testing if installed package can be loaded from final location 2021-05-16T01:43:47.2139820Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:43:47.2217654Z * DONE (diffobj) 2021-05-16T01:43:47.5040336Z * installing *source* package ‘ps’ ... 2021-05-16T01:43:47.5077760Z ** package ‘ps’ successfully unpacked and MD5 sums checked 2021-05-16T01:43:47.5079720Z ** using staged installation 2021-05-16T01:43:47.7071214Z ** libs 2021-05-16T01:43:47.7123553Z gcc -g -O2 -Wall px.c -o px 2021-05-16T01:43:47.8436758Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:43:47.9060074Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-common.c -o api-common.o 2021-05-16T01:43:47.9747369Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c common.c -o common.o 2021-05-16T01:43:48.0444177Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c extra.c -o extra.o 2021-05-16T01:43:48.2040875Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dummy.c -o dummy.o 2021-05-16T01:43:48.2554296Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error-codes.c -o error-codes.o 2021-05-16T01:43:48.5320897Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c posix.c -o posix.o 2021-05-16T01:43:48.7330425Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-posix.c -o api-posix.o 2021-05-16T01:43:48.8411460Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c linux.c -o linux.o 2021-05-16T01:43:49.0259619Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-linux.c -o api-linux.o 2021-05-16T01:43:49.4651215Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o ps.so init.o api-common.o common.o extra.o dummy.o error-codes.o posix.o api-posix.o linux.o api-linux.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:43:49.4995634Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-ps/00new/ps 2021-05-16T01:43:49.4997034Z ** R 2021-05-16T01:43:49.5103839Z ** inst 2021-05-16T01:43:49.5116253Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:43:50.5132060Z ** help 2021-05-16T01:43:50.6549060Z *** installing help indices 2021-05-16T01:43:50.7449363Z ** building package indices 2021-05-16T01:43:51.0208507Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:43:51.1976723Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:43:51.2159182Z ** testing if installed package can be loaded from final location 2021-05-16T01:43:51.4150375Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:43:51.4163886Z * DONE (ps) 2021-05-16T01:43:51.6240952Z * installing *source* package ‘praise’ ... 2021-05-16T01:43:51.6251125Z ** package ‘praise’ successfully unpacked and MD5 sums checked 2021-05-16T01:43:51.6252509Z ** using staged installation 2021-05-16T01:43:51.6365152Z ** R 2021-05-16T01:43:51.6405304Z ** inst 2021-05-16T01:43:51.6413975Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:43:51.8629631Z ** help 2021-05-16T01:43:51.8754599Z *** installing help indices 2021-05-16T01:43:51.8968157Z ** building package indices 2021-05-16T01:43:52.0971186Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:43:52.2817966Z ** testing if installed package can be loaded from final location 2021-05-16T01:43:52.4642132Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:43:52.4646891Z * DONE (praise) 2021-05-16T01:43:52.7845448Z * installing *source* package ‘pkgload’ ... 2021-05-16T01:43:52.7892231Z ** package ‘pkgload’ successfully unpacked and MD5 sums checked 2021-05-16T01:43:52.7894272Z ** using staged installation 2021-05-16T01:43:52.8032385Z ** R 2021-05-16T01:43:52.8137786Z ** inst 2021-05-16T01:43:52.8145691Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:43:53.6248859Z ** help 2021-05-16T01:43:53.6744480Z *** installing help indices 2021-05-16T01:43:53.7194262Z ** building package indices 2021-05-16T01:43:53.9475803Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:43:54.3862984Z ** testing if installed package can be loaded from final location 2021-05-16T01:43:54.8259551Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:43:54.8272831Z * DONE (pkgload) 2021-05-16T01:43:55.0619447Z * installing *source* package ‘evaluate’ ... 2021-05-16T01:43:55.0637140Z ** package ‘evaluate’ successfully unpacked and MD5 sums checked 2021-05-16T01:43:55.0638888Z ** using staged installation 2021-05-16T01:43:55.0766387Z ** R 2021-05-16T01:43:55.0817424Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:43:55.5514718Z ** help 2021-05-16T01:43:55.5811239Z *** installing help indices 2021-05-16T01:43:55.6114216Z ** building package indices 2021-05-16T01:43:55.8191466Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:43:55.9986133Z ** testing if installed package can be loaded from final location 2021-05-16T01:43:56.1810951Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:43:56.1818581Z * DONE (evaluate) 2021-05-16T01:43:56.3986025Z * installing *source* package ‘ellipsis’ ... 2021-05-16T01:43:56.3996488Z ** package ‘ellipsis’ successfully unpacked and MD5 sums checked 2021-05-16T01:43:56.3998164Z ** using staged installation 2021-05-16T01:43:56.4132861Z ** libs 2021-05-16T01:43:56.4191907Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dots.c -o dots.o 2021-05-16T01:43:56.4974025Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:43:56.5426866Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o ellipsis.so dots.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:43:56.5653993Z installing to /home/runner/work/_temp/Library/00LOCK-ellipsis/00new/ellipsis/libs 2021-05-16T01:43:56.5668539Z ** R 2021-05-16T01:43:56.5700232Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:43:56.8325673Z ** help 2021-05-16T01:43:56.8566926Z *** installing help indices 2021-05-16T01:43:56.8766535Z ** building package indices 2021-05-16T01:43:57.0761831Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:43:57.2697147Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:43:57.2881070Z ** testing if installed package can be loaded from final location 2021-05-16T01:43:57.4820210Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:43:57.4826419Z * DONE (ellipsis) 2021-05-16T01:43:57.7498258Z * installing *source* package ‘digest’ ... 2021-05-16T01:43:57.7530802Z ** package ‘digest’ successfully unpacked and MD5 sums checked 2021-05-16T01:43:57.7534184Z ** using staged installation 2021-05-16T01:43:57.7636018Z ** libs 2021-05-16T01:43:57.7697344Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c SpookyV2.cpp -o SpookyV2.o 2021-05-16T01:43:57.9407181Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o 2021-05-16T01:43:58.2611025Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3.c -o blake3.o 2021-05-16T01:43:58.9610950Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3_dispatch.c -o blake3_dispatch.o 2021-05-16T01:43:59.1939332Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3_portable.c -o blake3_portable.o 2021-05-16T01:43:59.7437583Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c crc32.c -o crc32.o 2021-05-16T01:43:59.8212327Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest.c -o digest.o 2021-05-16T01:44:00.0399186Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest2int.c -o digest2int.o 2021-05-16T01:44:00.1053007Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:44:00.1305924Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c md5.c -o md5.o 2021-05-16T01:44:00.2828507Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pmurhash.c -o pmurhash.o 2021-05-16T01:44:00.3361444Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c raes.c -o raes.o 2021-05-16T01:44:00.4132110Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha1.c -o sha1.o 2021-05-16T01:44:00.7054170Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha2.c -o sha2.o 2021-05-16T01:44:00.8176928Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha256.c -o sha256.o 2021-05-16T01:44:01.4041814Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c spooky_serialize.cpp -o spooky_serialize.o 2021-05-16T01:44:01.5293849Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c xxhash.c -o xxhash.o 2021-05-16T01:44:01.7968113Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o digest.so SpookyV2.o aes.o blake3.o blake3_dispatch.o blake3_portable.o crc32.o digest.o digest2int.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o spooky_serialize.o xxhash.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:44:01.8418337Z installing to /home/runner/work/_temp/Library/00LOCK-digest/00new/digest/libs 2021-05-16T01:44:01.8438858Z ** R 2021-05-16T01:44:01.8500838Z ** demo 2021-05-16T01:44:01.8506329Z ** inst 2021-05-16T01:44:01.8523862Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:44:02.3889721Z ** help 2021-05-16T01:44:02.4283125Z *** installing help indices 2021-05-16T01:44:02.4536090Z ** building package indices 2021-05-16T01:44:02.6490791Z ** installing vignettes 2021-05-16T01:44:02.6552394Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:44:02.8347154Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:44:02.8542099Z ** testing if installed package can be loaded from final location 2021-05-16T01:44:03.0353454Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:44:03.0369982Z * DONE (digest) 2021-05-16T01:44:03.2650652Z * installing *source* package ‘brio’ ... 2021-05-16T01:44:03.2669371Z ** package ‘brio’ successfully unpacked and MD5 sums checked 2021-05-16T01:44:03.2672823Z ** using staged installation 2021-05-16T01:44:03.2853035Z ** libs 2021-05-16T01:44:03.2922082Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c brio.c -o brio.o 2021-05-16T01:44:03.3317659Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c file_line_endings.c -o file_line_endings.o 2021-05-16T01:44:03.3807119Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:44:03.4240671Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_file.c -o read_file.o 2021-05-16T01:44:03.4765047Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_file_raw.c -o read_file_raw.o 2021-05-16T01:44:03.5299288Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_lines.c -o read_lines.o 2021-05-16T01:44:03.6102435Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write_file.c -o write_file.o 2021-05-16T01:44:03.6540266Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write_lines.c -o write_lines.o 2021-05-16T01:44:03.7106046Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o brio.so brio.o file_line_endings.o init.o read_file.o read_file_raw.o read_lines.o write_file.o write_lines.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:44:03.7343934Z installing to /home/runner/work/_temp/Library/00LOCK-brio/00new/brio/libs 2021-05-16T01:44:03.7358301Z ** R 2021-05-16T01:44:03.7390171Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:44:03.9690962Z ** help 2021-05-16T01:44:03.9902241Z *** installing help indices 2021-05-16T01:44:04.0108647Z ** building package indices 2021-05-16T01:44:04.2086303Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:44:04.3928165Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:44:04.4110543Z ** testing if installed package can be loaded from final location 2021-05-16T01:44:04.5892424Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:44:04.5897951Z * DONE (brio) 2021-05-16T01:44:04.8732832Z * installing *source* package ‘xml2’ ... 2021-05-16T01:44:04.8771410Z ** package ‘xml2’ successfully unpacked and MD5 sums checked 2021-05-16T01:44:04.8773427Z ** using staged installation 2021-05-16T01:44:04.9131545Z Found pkg-config cflags and libs! 2021-05-16T01:44:05.0051662Z Using PKG_CFLAGS=-I/usr/include/libxml2 2021-05-16T01:44:05.0052823Z Using PKG_LIBS=-lxml2 2021-05-16T01:44:05.2780774Z ** libs 2021-05-16T01:44:05.2831746Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c connection.cpp -o connection.o 2021-05-16T01:44:05.7651648Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:44:05.8121418Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_doc.cpp -o xml2_doc.o 2021-05-16T01:44:06.3699337Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_init.cpp -o xml2_init.o 2021-05-16T01:44:06.7746449Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_namespace.cpp -o xml2_namespace.o 2021-05-16T01:44:07.4866088Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_node.cpp -o xml2_node.o 2021-05-16T01:44:09.3116698Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_output.cpp -o xml2_output.o 2021-05-16T01:44:09.8459528Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_schema.cpp -o xml2_schema.o 2021-05-16T01:44:10.8361302Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_url.cpp -o xml2_url.o 2021-05-16T01:44:10.8947277Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_xpath.cpp -o xml2_xpath.o 2021-05-16T01:44:11.3431993Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o xml2.so connection.o init.o xml2_doc.o xml2_init.o xml2_namespace.o xml2_node.o xml2_output.o xml2_schema.o xml2_url.o xml2_xpath.o -lxml2 -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:44:11.4357405Z installing to /home/runner/work/_temp/Library/00LOCK-xml2/00new/xml2/libs 2021-05-16T01:44:11.4372508Z ** R 2021-05-16T01:44:11.4477499Z ** inst 2021-05-16T01:44:11.4490044Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:44:12.3552894Z ** help 2021-05-16T01:44:12.4511090Z *** installing help indices 2021-05-16T01:44:12.4977827Z ** building package indices 2021-05-16T01:44:12.7314709Z ** installing vignettes 2021-05-16T01:44:12.7404715Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:44:12.9322086Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:44:12.9523719Z ** testing if installed package can be loaded from final location 2021-05-16T01:44:13.1683052Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:44:13.1697920Z * DONE (xml2) 2021-05-16T01:44:13.4442057Z * installing *source* package ‘xfun’ ... 2021-05-16T01:44:13.4474676Z ** package ‘xfun’ successfully unpacked and MD5 sums checked 2021-05-16T01:44:13.4476470Z ** using staged installation 2021-05-16T01:44:13.4627408Z ** libs 2021-05-16T01:44:13.4699432Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T01:44:13.5736298Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:44:13.6200628Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o xfun.so base64.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:44:13.6555689Z installing to /home/runner/work/_temp/Library/00LOCK-xfun/00new/xfun/libs 2021-05-16T01:44:13.6568686Z ** R 2021-05-16T01:44:13.6720546Z ** inst 2021-05-16T01:44:13.6733336Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:44:14.9798962Z ** help 2021-05-16T01:44:15.1283377Z *** installing help indices 2021-05-16T01:44:15.2260766Z ** building package indices 2021-05-16T01:44:15.4994520Z ** installing vignettes 2021-05-16T01:44:15.5056888Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:44:15.6866579Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:44:15.7039892Z ** testing if installed package can be loaded from final location 2021-05-16T01:44:15.9057244Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:44:15.9071185Z * DONE (xfun) 2021-05-16T01:44:18.4439443Z * installing *source* package ‘stringi’ ... 2021-05-16T01:44:18.5618194Z ** package ‘stringi’ successfully unpacked and MD5 sums checked 2021-05-16T01:44:18.5619597Z ** using staged installation 2021-05-16T01:44:18.6919749Z checking for R_HOME... /opt/R/devel/lib/R 2021-05-16T01:44:18.6920994Z checking for R... /opt/R/devel/lib/R/bin/R 2021-05-16T01:44:18.8561169Z checking for endianness... little 2021-05-16T01:44:19.0232465Z checking for R >= 3.1.0 for C++11 use... yes 2021-05-16T01:44:19.1861483Z checking for R < 3.4.0 for CXX1X flag use... no 2021-05-16T01:44:19.1865390Z checking for cat... /usr/bin/cat 2021-05-16T01:44:19.4229056Z checking for local ICUDT_DIR... icu69/data 2021-05-16T01:44:19.4230107Z checking for gcc... gcc 2021-05-16T01:44:19.4865254Z checking whether the C compiler works... yes 2021-05-16T01:44:19.4867415Z checking for C compiler default output file name... a.out 2021-05-16T01:44:19.5301414Z checking for suffix of executables... 2021-05-16T01:44:19.5803672Z checking whether we are cross compiling... no 2021-05-16T01:44:19.6048566Z checking for suffix of object files... o 2021-05-16T01:44:19.6267836Z checking whether we are using the GNU C compiler... yes 2021-05-16T01:44:19.6480405Z checking whether gcc accepts -g... yes 2021-05-16T01:44:19.6843552Z checking for gcc option to accept ISO C89... none needed 2021-05-16T01:44:19.7059095Z checking how to run the C preprocessor... gcc -E 2021-05-16T01:44:19.7292224Z checking for grep that handles long lines and -e... /usr/bin/grep 2021-05-16T01:44:19.7310101Z checking for egrep... /usr/bin/grep -E 2021-05-16T01:44:19.8430801Z checking for ANSI C header files... yes 2021-05-16T01:44:19.8722919Z checking for sys/types.h... yes 2021-05-16T01:44:19.9076670Z checking for sys/stat.h... yes 2021-05-16T01:44:19.9426010Z checking for stdlib.h... yes 2021-05-16T01:44:19.9804135Z checking for string.h... yes 2021-05-16T01:44:20.0168257Z checking for memory.h... yes 2021-05-16T01:44:20.0562339Z checking for strings.h... yes 2021-05-16T01:44:20.0947551Z checking for inttypes.h... yes 2021-05-16T01:44:20.1342003Z checking for stdint.h... yes 2021-05-16T01:44:20.1761313Z checking for unistd.h... yes 2021-05-16T01:44:20.2347291Z checking elf.h usability... yes 2021-05-16T01:44:20.2461460Z checking elf.h presence... yes 2021-05-16T01:44:20.2462447Z checking for elf.h... yes 2021-05-16T01:44:20.3003704Z checking whether we are using the GNU C++ compiler... yes 2021-05-16T01:44:20.3238055Z checking whether g++ -std=gnu++11 accepts -g... yes 2021-05-16T01:44:20.6506873Z checking whether the C++ compiler supports the long long type... yes 2021-05-16T01:44:20.6776365Z checking whether the compiler implements namespaces... yes 2021-05-16T01:44:20.8374560Z checking whether the compiler supports Standard Template Library... yes 2021-05-16T01:44:21.3701732Z checking whether std::map is available... yes 2021-05-16T01:44:21.3731686Z checking for pkg-config... /usr/bin/pkg-config 2021-05-16T01:44:21.3799941Z checking with pkg-config for the system ICU4C... 66.1 2021-05-16T01:44:21.3824788Z checking for ICU4C >= 55... yes 2021-05-16T01:44:21.3884829Z checking for additional required CPPFLAGS, LDFLAGS, and LIBS... done 2021-05-16T01:44:21.7265728Z checking whether an ICU4C-based project can be built... yes 2021-05-16T01:44:21.7879852Z checking programmatically for sufficient U_ICU_VERSION_MAJOR_NUM... yes 2021-05-16T01:44:22.0806560Z checking programmatically if U_CHARSET_IS_UTF8 is defined and set... yes 2021-05-16T01:44:22.8442139Z checking the capabilities of the ICU data library (ucnv, uloc, utrans)... yes 2021-05-16T01:44:23.4525060Z checking the capabilities of the ICU data library (ucol)... yes 2021-05-16T01:44:23.4906725Z configure: creating ./config.status 2021-05-16T01:44:23.5745855Z config.status: creating src/Makevars 2021-05-16T01:44:23.5923230Z config.status: creating src/uconfig_local.h 2021-05-16T01:44:23.6097488Z config.status: creating src/install.libs.R 2021-05-16T01:44:23.6265453Z 2021-05-16T01:44:23.6266344Z *** stringi configure summary: 2021-05-16T01:44:23.6266989Z ICU_FOUND=1 2021-05-16T01:44:23.6267625Z STRINGI_CXXSTD=CXX_STD=CXX11 2021-05-16T01:44:23.6268873Z STRINGI_CFLAGS= -fpic 2021-05-16T01:44:23.6269936Z STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H 2021-05-16T01:44:23.6270894Z STRINGI_CXXFLAGS= -fpic 2021-05-16T01:44:23.6271976Z STRINGI_LDFLAGS=-L/usr/lib/x86_64-linux-gnu 2021-05-16T01:44:23.6273057Z STRINGI_LIBS=-licui18n -licuuc -licudata 2021-05-16T01:44:23.6273541Z 2021-05-16T01:44:23.6275420Z *** Compiler settings used: 2021-05-16T01:44:23.6275967Z CC=gcc 2021-05-16T01:44:23.6276644Z LD=g++ -std=gnu++14 2021-05-16T01:44:23.6277377Z CFLAGS=-g -O2 -fpic 2021-05-16T01:44:23.6278491Z CPPFLAGS=-I/usr/local/include -UDEBUG -DNDEBUG 2021-05-16T01:44:23.6279331Z CXX=g++ -std=gnu++11 2021-05-16T01:44:23.6280073Z CXXFLAGS=-g -O2 -fpic 2021-05-16T01:44:23.6280610Z LDFLAGS= 2021-05-16T01:44:23.6281130Z LIBS= 2021-05-16T01:44:23.6281466Z 2021-05-16T01:44:23.6653270Z ** libs 2021-05-16T01:44:23.6747376Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_brkiter.cpp -o stri_brkiter.o 2021-05-16T01:44:24.3361488Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_collator.cpp -o stri_collator.o 2021-05-16T01:44:24.9506397Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_common.cpp -o stri_common.o 2021-05-16T01:44:25.6093655Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_compare.cpp -o stri_compare.o 2021-05-16T01:44:26.3254550Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_base.cpp -o stri_container_base.o 2021-05-16T01:44:26.8372684Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o 2021-05-16T01:44:27.6616432Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listint.cpp -o stri_container_listint.o 2021-05-16T01:44:28.2366797Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listraw.cpp -o stri_container_listraw.o 2021-05-16T01:44:28.8386681Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listutf8.cpp -o stri_container_listutf8.o 2021-05-16T01:44:29.3944038Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_regex.cpp -o stri_container_regex.o 2021-05-16T01:44:30.0607581Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_usearch.cpp -o stri_container_usearch.o 2021-05-16T01:44:30.7418453Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf16.cpp -o stri_container_utf16.o 2021-05-16T01:44:31.4796725Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8.cpp -o stri_container_utf8.o 2021-05-16T01:44:32.1586588Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o 2021-05-16T01:44:32.7661661Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o 2021-05-16T01:44:33.7005157Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_detection.cpp -o stri_encoding_detection.o 2021-05-16T01:44:35.2677052Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_management.cpp -o stri_encoding_management.o 2021-05-16T01:44:35.9454263Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_escape.cpp -o stri_escape.o 2021-05-16T01:44:36.6272136Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_exception.cpp -o stri_exception.o 2021-05-16T01:44:37.1583582Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ICU_settings.cpp -o stri_ICU_settings.o 2021-05-16T01:44:37.8438282Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_join.cpp -o stri_join.o 2021-05-16T01:44:38.6196534Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_length.cpp -o stri_length.o 2021-05-16T01:44:39.3083547Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_pad.cpp -o stri_pad.o 2021-05-16T01:44:39.9222171Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_prepare_arg.cpp -o stri_prepare_arg.o 2021-05-16T01:44:40.7211783Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_random.cpp -o stri_random.o 2021-05-16T01:44:41.4949567Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_reverse.cpp -o stri_reverse.o 2021-05-16T01:44:42.0613077Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_count.cpp -o stri_search_class_count.o 2021-05-16T01:44:42.7138226Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_detect.cpp -o stri_search_class_detect.o 2021-05-16T01:44:43.3507269Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_extract.cpp -o stri_search_class_extract.o 2021-05-16T01:44:44.1980152Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_locate.cpp -o stri_search_class_locate.o 2021-05-16T01:44:45.0210260Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_replace.cpp -o stri_search_class_replace.o 2021-05-16T01:44:46.0126198Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_split.cpp -o stri_search_class_split.o 2021-05-16T01:44:46.8580692Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o 2021-05-16T01:44:47.5992863Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_subset.cpp -o stri_search_class_subset.o 2021-05-16T01:44:48.3669159Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_trim.cpp -o stri_search_class_trim.o 2021-05-16T01:44:49.0462829Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_common.cpp -o stri_search_common.o 2021-05-16T01:44:49.6951216Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_count.cpp -o stri_search_coll_count.o 2021-05-16T01:44:50.3730257Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o 2021-05-16T01:44:51.0584076Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o 2021-05-16T01:44:51.8839390Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o 2021-05-16T01:44:52.7546476Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o 2021-05-16T01:44:53.6510971Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_split.cpp -o stri_search_coll_split.o 2021-05-16T01:44:54.5050064Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o 2021-05-16T01:44:55.2119129Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o 2021-05-16T01:44:55.9570629Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o 2021-05-16T01:44:56.4989915Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o 2021-05-16T01:44:57.8505363Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o 2021-05-16T01:44:57.9061523Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o 2021-05-16T01:44:58.5941413Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o 2021-05-16T01:44:59.1764025Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o 2021-05-16T01:44:59.7300287Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o 2021-05-16T01:45:00.5006816Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o 2021-05-16T01:45:01.2551638Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o 2021-05-16T01:45:02.0801469Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o 2021-05-16T01:45:02.9042437Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o 2021-05-16T01:45:03.6422279Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o 2021-05-16T01:45:04.2984153Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_in.cpp -o stri_search_in.o 2021-05-16T01:45:04.3130508Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_other_split.cpp -o stri_search_other_split.o 2021-05-16T01:45:05.1255706Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_count.cpp -o stri_search_regex_count.o 2021-05-16T01:45:05.7087698Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o 2021-05-16T01:45:06.2764654Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o 2021-05-16T01:45:07.0664470Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o 2021-05-16T01:45:07.8109192Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_match.cpp -o stri_search_regex_match.o 2021-05-16T01:45:08.7867335Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o 2021-05-16T01:45:09.4780882Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_split.cpp -o stri_search_regex_split.o 2021-05-16T01:45:10.2736665Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o 2021-05-16T01:45:10.9484550Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sort.cpp -o stri_sort.o 2021-05-16T01:45:12.5516102Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stats.cpp -o stri_stats.o 2021-05-16T01:45:13.1989964Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stringi.cpp -o stri_stringi.o 2021-05-16T01:45:13.7830313Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sub.cpp -o stri_sub.o 2021-05-16T01:45:14.6023309Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_test.cpp -o stri_test.o 2021-05-16T01:45:15.1281296Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_zone.cpp -o stri_time_zone.o 2021-05-16T01:45:15.7156523Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_calendar.cpp -o stri_time_calendar.o 2021-05-16T01:45:16.5011300Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_symbols.cpp -o stri_time_symbols.o 2021-05-16T01:45:17.2257864Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_format.cpp -o stri_time_format.o 2021-05-16T01:45:18.0444535Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_casemap.cpp -o stri_trans_casemap.o 2021-05-16T01:45:18.7328076Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_other.cpp -o stri_trans_other.o 2021-05-16T01:45:19.4420643Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_normalization.cpp -o stri_trans_normalization.o 2021-05-16T01:45:20.0655539Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o 2021-05-16T01:45:21.3571888Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ucnv.cpp -o stri_ucnv.o 2021-05-16T01:45:21.3588146Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_uloc.cpp -o stri_uloc.o 2021-05-16T01:45:21.8269684Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_utils.cpp -o stri_utils.o 2021-05-16T01:45:22.4240846Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_wrap.cpp -o stri_wrap.o 2021-05-16T01:45:23.7775437Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o stringi.so stri_brkiter.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_stats.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:45:23.9886878Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-stringi/00new/stringi 2021-05-16T01:45:24.0693411Z ** R 2021-05-16T01:45:24.1016361Z ** inst 2021-05-16T01:45:24.1024237Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:45:25.1257810Z ** help 2021-05-16T01:45:25.5474989Z *** installing help indices 2021-05-16T01:45:25.7460732Z ** building package indices 2021-05-16T01:45:26.1369437Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:45:26.3287565Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:45:26.3517876Z ** testing if installed package can be loaded from final location 2021-05-16T01:45:26.5546451Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:45:26.5560235Z * DONE (stringi) 2021-05-16T01:45:27.5180764Z * installing *source* package ‘Rcpp’ ... 2021-05-16T01:45:27.5539999Z ** package ‘Rcpp’ successfully unpacked and MD5 sums checked 2021-05-16T01:45:27.5541384Z ** using staged installation 2021-05-16T01:45:27.5647392Z ** libs 2021-05-16T01:45:27.5711741Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c api.cpp -o api.o 2021-05-16T01:45:30.6937914Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c attributes.cpp -o attributes.o 2021-05-16T01:45:46.0501008Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c barrier.cpp -o barrier.o 2021-05-16T01:45:46.2552383Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c date.cpp -o date.o 2021-05-16T01:45:49.5290787Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c module.cpp -o module.o 2021-05-16T01:45:55.9599459Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c rcpp_init.cpp -o rcpp_init.o 2021-05-16T01:45:58.9181954Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o Rcpp.so api.o attributes.o barrier.o date.o module.o rcpp_init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:45:59.0991909Z installing to /home/runner/work/_temp/Library/00LOCK-Rcpp/00new/Rcpp/libs 2021-05-16T01:45:59.1108389Z ** R 2021-05-16T01:45:59.1254745Z ** inst 2021-05-16T01:45:59.1649723Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:46:00.8794615Z ** help 2021-05-16T01:46:00.9784860Z *** installing help indices 2021-05-16T01:46:01.0405908Z ** building package indices 2021-05-16T01:46:01.2908510Z ** installing vignettes 2021-05-16T01:46:01.2974648Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:46:01.5672689Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:46:01.5912441Z ** testing if installed package can be loaded from final location 2021-05-16T01:46:01.8881014Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:46:01.8974580Z * DONE (Rcpp) 2021-05-16T01:46:02.2076335Z * installing *source* package ‘commonmark’ ... 2021-05-16T01:46:02.2116294Z ** package ‘commonmark’ successfully unpacked and MD5 sums checked 2021-05-16T01:46:02.8719138Z ** using staged installation 2021-05-16T01:46:02.8724804Z rm -f cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o extensions.o init.o wrapper.o commonmark.so cmark/libstatcmark.a 2021-05-16T01:46:02.8735995Z ** libs 2021-05-16T01:46:02.8737943Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions.c -o extensions.o 2021-05-16T01:46:02.8740322Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:46:02.8742660Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c wrapper.c -o wrapper.o 2021-05-16T01:46:02.8745018Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/cmark.c -o cmark/cmark.o 2021-05-16T01:46:02.8747370Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/node.c -o cmark/node.o 2021-05-16T01:46:02.8749779Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/iterator.c -o cmark/iterator.o 2021-05-16T01:46:02.8752206Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/blocks.c -o cmark/blocks.o 2021-05-16T01:46:03.2920874Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/inlines.c -o cmark/inlines.o 2021-05-16T01:46:03.9969663Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/scanners.c -o cmark/scanners.o 2021-05-16T01:46:05.7121971Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/utf8.c -o cmark/utf8.o 2021-05-16T01:46:08.8807587Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/buffer.c -o cmark/buffer.o 2021-05-16T01:46:09.0117389Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/references.c -o cmark/references.o 2021-05-16T01:46:09.0648003Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/render.c -o cmark/render.o 2021-05-16T01:46:09.1736166Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/man.c -o cmark/man.o 2021-05-16T01:46:09.2669092Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/xml.c -o cmark/xml.o 2021-05-16T01:46:09.3541210Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/html.c -o cmark/html.o 2021-05-16T01:46:09.5516684Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/commonmark.c -o cmark/commonmark.o 2021-05-16T01:46:09.7540814Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/latex.c -o cmark/latex.o 2021-05-16T01:46:09.8828212Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_href_e.c -o cmark/houdini_href_e.o 2021-05-16T01:46:09.9280754Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_html_e.c -o cmark/houdini_html_e.o 2021-05-16T01:46:09.9759012Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_html_u.c -o cmark/houdini_html_u.o 2021-05-16T01:46:10.0894771Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/cmark_ctype.c -o cmark/cmark_ctype.o 2021-05-16T01:46:10.1219579Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/arena.c -o cmark/arena.o 2021-05-16T01:46:10.1904007Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/linked_list.c -o cmark/linked_list.o 2021-05-16T01:46:10.2399479Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/plugin.c -o cmark/plugin.o 2021-05-16T01:46:10.2794055Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/registry.c -o cmark/registry.o 2021-05-16T01:46:10.3303880Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/syntax_extension.c -o cmark/syntax_extension.o 2021-05-16T01:46:10.3976290Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/plaintext.c -o cmark/plaintext.o 2021-05-16T01:46:10.4993044Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/footnotes.c -o cmark/footnotes.o 2021-05-16T01:46:10.5448333Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/map.c -o cmark/map.o 2021-05-16T01:46:10.6219661Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/autolink.c -o extensions/autolink.o 2021-05-16T01:46:10.7981132Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/core-extensions.c -o extensions/core-extensions.o 2021-05-16T01:46:10.8317080Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/ext_scanners.c -o extensions/ext_scanners.o 2021-05-16T01:46:10.9777935Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/strikethrough.c -o extensions/strikethrough.o 2021-05-16T01:46:11.0627182Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/table.c -o extensions/table.o 2021-05-16T01:46:11.3468113Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/tagfilter.c -o extensions/tagfilter.o 2021-05-16T01:46:11.4090766Z ar rcs cmark/libstatcmark.a cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o 2021-05-16T01:46:11.4229274Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o commonmark.so extensions.o init.o wrapper.o -Lcmark -lstatcmark -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:46:11.4684402Z installing to /home/runner/work/_temp/Library/00LOCK-commonmark/00new/commonmark/libs 2021-05-16T01:46:11.4748051Z ** R 2021-05-16T01:46:11.4776310Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:46:11.7147773Z ** help 2021-05-16T01:46:11.7272894Z *** installing help indices 2021-05-16T01:46:11.7436043Z ** building package indices 2021-05-16T01:46:11.9397580Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:46:12.1250002Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:46:12.1456002Z ** testing if installed package can be loaded from final location 2021-05-16T01:46:12.3289639Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:46:12.3295427Z * DONE (commonmark) 2021-05-16T01:46:12.5820541Z * installing *source* package ‘brew’ ... 2021-05-16T01:46:12.5822424Z ** using staged installation 2021-05-16T01:46:12.5902289Z ** R 2021-05-16T01:46:12.5926926Z ** inst 2021-05-16T01:46:12.5949475Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:46:12.9394542Z ** help 2021-05-16T01:46:12.9532332Z *** installing help indices 2021-05-16T01:46:12.9712035Z ** building package indices 2021-05-16T01:46:13.1733543Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:46:13.3557473Z ** testing if installed package can be loaded from final location 2021-05-16T01:46:13.5283060Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:46:13.5294757Z * DONE (brew) 2021-05-16T01:46:13.7520666Z * installing *source* package ‘sessioninfo’ ... 2021-05-16T01:46:13.7533039Z ** package ‘sessioninfo’ successfully unpacked and MD5 sums checked 2021-05-16T01:46:13.7534910Z ** using staged installation 2021-05-16T01:46:13.7702463Z ** R 2021-05-16T01:46:13.7741881Z ** inst 2021-05-16T01:46:13.7748754Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:46:14.8753112Z ** help 2021-05-16T01:46:14.8755703Z *** installing help indices 2021-05-16T01:46:14.8761027Z ** building package indices 2021-05-16T01:46:14.8762520Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:46:14.8764423Z ** testing if installed package can be loaded from final location 2021-05-16T01:46:14.8897831Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:46:14.8904808Z * DONE (sessioninfo) 2021-05-16T01:46:15.0937618Z * installing *source* package ‘prettyunits’ ... 2021-05-16T01:46:15.0948250Z ** package ‘prettyunits’ successfully unpacked and MD5 sums checked 2021-05-16T01:46:15.0950146Z ** using staged installation 2021-05-16T01:46:15.1047153Z ** R 2021-05-16T01:46:15.1087804Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:46:15.4173725Z ** help 2021-05-16T01:46:15.4447095Z *** installing help indices 2021-05-16T01:46:15.4655018Z ** building package indices 2021-05-16T01:46:15.6658173Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:46:15.8390081Z ** testing if installed package can be loaded from final location 2021-05-16T01:46:16.0154289Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:46:16.0164488Z * DONE (prettyunits) 2021-05-16T01:46:16.5295515Z * installing *source* package ‘vctrs’ ... 2021-05-16T01:46:16.5454489Z ** package ‘vctrs’ successfully unpacked and MD5 sums checked 2021-05-16T01:46:16.5456195Z ** using staged installation 2021-05-16T01:46:16.5641243Z ** libs 2021-05-16T01:46:16.5715500Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c altrep-rle.c -o altrep-rle.o 2021-05-16T01:46:16.6898755Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c arg-counter.c -o arg-counter.o 2021-05-16T01:46:16.7759188Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c arg.c -o arg.o 2021-05-16T01:46:16.8649235Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c bind.c -o bind.o 2021-05-16T01:46:17.1007888Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c c-unchop.c -o c-unchop.o 2021-05-16T01:46:17.2120289Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c c.c -o c.o 2021-05-16T01:46:17.3461208Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c callables.c -o callables.o 2021-05-16T01:46:17.4114798Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast-bare.c -o cast-bare.o 2021-05-16T01:46:17.5144708Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast-dispatch.c -o cast-dispatch.o 2021-05-16T01:46:17.5853530Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast.c -o cast.o 2021-05-16T01:46:17.7208225Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c compare.c -o compare.o 2021-05-16T01:46:17.9175972Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c complete.c -o complete.o 2021-05-16T01:46:18.0440991Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c conditions.c -o conditions.o 2021-05-16T01:46:18.1280095Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dictionary.c -o dictionary.o 2021-05-16T01:46:18.3708136Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dim.c -o dim.o 2021-05-16T01:46:18.4315083Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c equal.c -o equal.o 2021-05-16T01:46:18.8126658Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fields.c -o fields.o 2021-05-16T01:46:18.8985261Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fill.c -o fill.o 2021-05-16T01:46:19.0206968Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c group.c -o group.o 2021-05-16T01:46:19.1419683Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c growable.c -o growable.o 2021-05-16T01:46:19.1992158Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hash.c -o hash.o 2021-05-16T01:46:19.4248827Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:46:19.4878889Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c names.c -o names.o 2021-05-16T01:46:19.7988223Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-groups.c -o order-groups.o 2021-05-16T01:46:19.8776811Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-radix.c -o order-radix.o 2021-05-16T01:46:20.5823015Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-sortedness.c -o order-sortedness.o 2021-05-16T01:46:20.7324335Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-transform.c -o order-transform.o 2021-05-16T01:46:20.8050972Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-truelength.c -o order-truelength.o 2021-05-16T01:46:20.8762075Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c poly-op.c -o poly-op.o 2021-05-16T01:46:21.0363752Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c proxy-restore.c -o proxy-restore.o 2021-05-16T01:46:21.1469202Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c proxy.c -o proxy.o 2021-05-16T01:46:21.2792041Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ptype2-dispatch.c -o ptype2-dispatch.o 2021-05-16T01:46:21.3912252Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rep.c -o rep.o 2021-05-16T01:46:21.5246842Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c runs.c -o runs.o 2021-05-16T01:46:21.7709792Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c shape.c -o shape.o 2021-05-16T01:46:21.8660505Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size-common.c -o size-common.o 2021-05-16T01:46:21.9465474Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size.c -o size.o 2021-05-16T01:46:22.0604081Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-array.c -o slice-array.o 2021-05-16T01:46:22.5304512Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-assign-array.c -o slice-assign-array.o 2021-05-16T01:46:22.8807000Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-assign.c -o slice-assign.o 2021-05-16T01:46:23.1239079Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-chop.c -o slice-chop.o 2021-05-16T01:46:23.2986338Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice.c -o slice.o 2021-05-16T01:46:23.5670644Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c split.c -o split.o 2021-05-16T01:46:23.6221068Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c subscript-loc.c -o subscript-loc.o 2021-05-16T01:46:23.8209760Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c subscript.c -o subscript.o 2021-05-16T01:46:23.9694058Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c translate.c -o translate.o 2021-05-16T01:46:24.0791786Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-data-frame.c -o type-data-frame.o 2021-05-16T01:46:24.4324844Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-date-time.c -o type-date-time.o 2021-05-16T01:46:24.5848878Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-factor.c -o type-factor.o 2021-05-16T01:46:24.7091926Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-info.c -o type-info.o 2021-05-16T01:46:24.8080129Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-tibble.c -o type-tibble.o 2021-05-16T01:46:24.8797864Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type.c -o type.o 2021-05-16T01:46:24.9970060Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type2.c -o type2.o 2021-05-16T01:46:25.1286289Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typeof2-s3.c -o typeof2-s3.o 2021-05-16T01:46:25.2528872Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typeof2.c -o typeof2.o 2021-05-16T01:46:25.3561669Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c unspecified.c -o unspecified.o 2021-05-16T01:46:25.4324916Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils-dispatch.c -o utils-dispatch.o 2021-05-16T01:46:25.5145905Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils-rlang.c -o utils-rlang.o 2021-05-16T01:46:25.5743754Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T01:46:26.1852870Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-16T01:46:26.2260930Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o vctrs.so altrep-rle.o arg-counter.o arg.o bind.o c-unchop.o c.o callables.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o equal.o fields.o fill.o group.o growable.o hash.o init.o names.o order-groups.o order-radix.o order-sortedness.o order-transform.o order-truelength.o poly-op.o proxy-restore.o proxy.o ptype2-dispatch.o rep.o runs.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-tibble.o type.o type2.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils-rlang.o utils.o version.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:46:26.2876594Z installing to /home/runner/work/_temp/Library/00LOCK-vctrs/00new/vctrs/libs 2021-05-16T01:46:26.2904064Z ** R 2021-05-16T01:46:26.3253959Z ** inst 2021-05-16T01:46:26.3275046Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:46:28.7458907Z ** help 2021-05-16T01:46:28.9927663Z *** installing help indices 2021-05-16T01:46:29.1575167Z *** copying figures 2021-05-16T01:46:29.1583925Z ** building package indices 2021-05-16T01:46:29.4703586Z ** installing vignettes 2021-05-16T01:46:29.4885761Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:46:29.7359988Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:46:29.7574544Z ** testing if installed package can be loaded from final location 2021-05-16T01:46:30.0568193Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:46:30.0604026Z * DONE (vctrs) 2021-05-16T01:46:30.3732213Z * installing *source* package ‘processx’ ... 2021-05-16T01:46:30.3768762Z ** package ‘processx’ successfully unpacked and MD5 sums checked 2021-05-16T01:46:30.3770951Z ** using staged installation 2021-05-16T01:46:30.3950025Z ** libs 2021-05-16T01:46:30.4018256Z gcc -g -O2 -L/usr/local/lib -Wall tools/px.c -o tools/px 2021-05-16T01:46:30.5512980Z gcc -g -O2 -L/usr/local/lib supervisor/supervisor.c \ 2021-05-16T01:46:30.5514745Z supervisor/utils.c -o supervisor/supervisor 2021-05-16T01:46:30.7243180Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T01:46:30.8173610Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c client.c -o client.o 2021-05-16T01:46:30.9128432Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c errors.c -o errors.o 2021-05-16T01:46:31.8800631Z gcc -shared -L"/opt/R/devel/lib/R/lib" -L/usr/local/lib -o client.so base64.o client.o errors.o \ 2021-05-16T01:46:31.8801675Z -L"/opt/R/devel/lib/R/lib" -lR 2021-05-16T01:46:31.8802787Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:46:31.8803898Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c poll.c -o poll.o 2021-05-16T01:46:31.8805275Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c processx-connection.c -o processx-connection.o 2021-05-16T01:46:31.8806828Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c processx-vector.c -o processx-vector.o 2021-05-16T01:46:31.8808155Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c create-time.c -o create-time.o 2021-05-16T01:46:31.8809403Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/childlist.c -o unix/childlist.o 2021-05-16T01:46:31.8810661Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/connection.c -o unix/connection.o 2021-05-16T01:46:31.8950988Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/processx.c -o unix/processx.o 2021-05-16T01:46:32.2167559Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/sigchld.c -o unix/sigchld.o 2021-05-16T01:46:32.3188053Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/utils.c -o unix/utils.o 2021-05-16T01:46:32.4309565Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/named_pipe.c -o unix/named_pipe.o 2021-05-16T01:46:32.4895303Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cleancall.c -o cleancall.o 2021-05-16T01:46:32.5626231Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o processx.so init.o poll.o errors.o processx-connection.o processx-vector.o create-time.o base64.o unix/childlist.o unix/connection.o unix/processx.o unix/sigchld.o unix/utils.o unix/named_pipe.o cleancall.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:46:32.5899215Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-processx/00new/processx 2021-05-16T01:46:32.5939766Z ** R 2021-05-16T01:46:32.6084705Z ** inst 2021-05-16T01:46:32.6092741Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:46:34.0709995Z ** help 2021-05-16T01:46:34.1423938Z *** installing help indices 2021-05-16T01:46:34.1815096Z ** building package indices 2021-05-16T01:46:34.4107491Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:46:34.6061814Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:46:34.6325077Z ** testing if installed package can be loaded from final location 2021-05-16T01:46:34.8418205Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:46:34.8433213Z * DONE (processx) 2021-05-16T01:46:35.0969340Z * installing *source* package ‘markdown’ ... 2021-05-16T01:46:35.0996492Z ** package ‘markdown’ successfully unpacked and MD5 sums checked 2021-05-16T01:46:35.0998369Z ** using staged installation 2021-05-16T01:46:35.1154128Z ** libs 2021-05-16T01:46:35.1215737Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rbase64.c -o Rbase64.o 2021-05-16T01:46:35.1895364Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rinit.c -o Rinit.o 2021-05-16T01:46:35.2412628Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rmarkdown.c -o Rmarkdown.o 2021-05-16T01:46:35.4108248Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c autolink.c -o autolink.o 2021-05-16T01:46:35.5151569Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c buffer.c -o buffer.o 2021-05-16T01:46:35.5953030Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_href_e.c -o houdini_href_e.o 2021-05-16T01:46:35.6346568Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_html_e.c -o houdini_html_e.o 2021-05-16T01:46:35.6783377Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html.c -o html.o 2021-05-16T01:46:35.8998409Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html_smartypants.c -o html_smartypants.o 2021-05-16T01:46:36.0448262Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c markdown.c -o markdown.o 2021-05-16T01:46:37.1333833Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stack.c -o stack.o 2021-05-16T01:46:37.1800950Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o markdown.so Rbase64.o Rinit.o Rmarkdown.o autolink.o buffer.o houdini_href_e.o houdini_html_e.o html.o html_smartypants.o markdown.o stack.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:46:37.2116069Z installing to /home/runner/work/_temp/Library/00LOCK-markdown/00new/markdown/libs 2021-05-16T01:46:37.2118494Z ** R 2021-05-16T01:46:37.2173526Z ** inst 2021-05-16T01:46:37.2192952Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:46:37.6335000Z ** help 2021-05-16T01:46:37.6697916Z *** installing help indices 2021-05-16T01:46:37.6962064Z ** building package indices 2021-05-16T01:46:37.9074780Z ** installing vignettes 2021-05-16T01:46:37.9110336Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:46:38.0950065Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:46:38.1142962Z ** testing if installed package can be loaded from final location 2021-05-16T01:46:38.2987488Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:46:38.3004401Z * DONE (markdown) 2021-05-16T01:46:38.5201374Z * installing *source* package ‘highr’ ... 2021-05-16T01:46:38.5213117Z ** package ‘highr’ successfully unpacked and MD5 sums checked 2021-05-16T01:46:38.5214980Z ** using staged installation 2021-05-16T01:46:38.5370237Z ** R 2021-05-16T01:46:38.5401044Z ** inst 2021-05-16T01:46:38.5411451Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:46:38.8610603Z ** help 2021-05-16T01:46:38.8730510Z *** installing help indices 2021-05-16T01:46:38.8890847Z ** building package indices 2021-05-16T01:46:39.0815585Z ** installing vignettes 2021-05-16T01:46:39.0869559Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:46:39.2746815Z ** testing if installed package can be loaded from final location 2021-05-16T01:46:39.4540667Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:46:39.4548411Z * DONE (highr) 2021-05-16T01:46:39.7291252Z * installing *source* package ‘stringr’ ... 2021-05-16T01:46:39.7322359Z ** package ‘stringr’ successfully unpacked and MD5 sums checked 2021-05-16T01:46:39.7324396Z ** using staged installation 2021-05-16T01:46:39.7478215Z ** R 2021-05-16T01:46:39.7557777Z ** data 2021-05-16T01:46:39.7561648Z *** moving datasets to lazyload DB 2021-05-16T01:46:39.7743110Z ** inst 2021-05-16T01:46:39.7755389Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:46:40.2594629Z ** help 2021-05-16T01:46:40.3388324Z *** installing help indices 2021-05-16T01:46:40.3942910Z *** copying figures 2021-05-16T01:46:40.3944690Z ** building package indices 2021-05-16T01:46:40.6194872Z ** installing vignettes 2021-05-16T01:46:40.6254267Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:46:40.8056039Z ** testing if installed package can be loaded from final location 2021-05-16T01:46:41.0032137Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:46:41.0045271Z * DONE (stringr) 2021-05-16T01:46:41.2264334Z * installing *source* package ‘rversions’ ... 2021-05-16T01:46:41.2275525Z ** package ‘rversions’ successfully unpacked and MD5 sums checked 2021-05-16T01:46:41.2277390Z ** using staged installation 2021-05-16T01:46:41.2422507Z ** R 2021-05-16T01:46:41.2460097Z ** inst 2021-05-16T01:46:41.2466596Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:46:41.5643656Z ** help 2021-05-16T01:46:41.5832771Z *** installing help indices 2021-05-16T01:46:41.6034335Z *** copying figures 2021-05-16T01:46:41.6036321Z ** building package indices 2021-05-16T01:46:41.7988434Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:46:41.9979233Z ** testing if installed package can be loaded from final location 2021-05-16T01:46:42.2025388Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:46:42.2031395Z * DONE (rversions) 2021-05-16T01:46:43.3836691Z * installing *source* package ‘pillar’ ... 2021-05-16T01:46:43.3840685Z ** package ‘pillar’ successfully unpacked and MD5 sums checked 2021-05-16T01:46:43.3841580Z ** using staged installation 2021-05-16T01:46:43.3842148Z ** R 2021-05-16T01:46:43.3842608Z ** inst 2021-05-16T01:46:43.3843764Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:46:44.2702423Z ** help 2021-05-16T01:46:44.3508208Z *** installing help indices 2021-05-16T01:46:44.4092019Z *** copying figures 2021-05-16T01:46:44.4096137Z ** building package indices 2021-05-16T01:46:44.6566198Z ** installing vignettes 2021-05-16T01:46:44.6650954Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:46:44.9448087Z ** testing if installed package can be loaded from final location 2021-05-16T01:46:45.2574066Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:46:45.2600436Z * DONE (pillar) 2021-05-16T01:46:45.5224359Z * installing *source* package ‘callr’ ... 2021-05-16T01:46:45.5251508Z ** package ‘callr’ successfully unpacked and MD5 sums checked 2021-05-16T01:46:45.5252927Z ** using staged installation 2021-05-16T01:46:45.5382483Z ** R 2021-05-16T01:46:45.5521734Z ** inst 2021-05-16T01:46:45.5528156Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:46:48.4358234Z ** help 2021-05-16T01:46:48.5546627Z *** installing help indices 2021-05-16T01:46:48.6175801Z ** building package indices 2021-05-16T01:46:48.8668654Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:46:49.0620255Z ** testing if installed package can be loaded from final location 2021-05-16T01:46:49.3201412Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:46:49.3234146Z * DONE (callr) 2021-05-16T01:46:49.7794523Z * installing *source* package ‘knitr’ ... 2021-05-16T01:46:49.7904211Z ** package ‘knitr’ successfully unpacked and MD5 sums checked 2021-05-16T01:46:49.7905322Z ** using staged installation 2021-05-16T01:46:49.8224784Z ** R 2021-05-16T01:46:49.8583159Z ** demo 2021-05-16T01:46:49.8588013Z ** inst 2021-05-16T01:46:49.8689411Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:46:53.7758708Z ** help 2021-05-16T01:46:53.9598273Z *** installing help indices 2021-05-16T01:46:54.0757798Z ** building package indices 2021-05-16T01:46:54.3647911Z ** installing vignettes 2021-05-16T01:46:54.3734389Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:46:54.5797262Z ** testing if installed package can be loaded from final location 2021-05-16T01:46:54.8687035Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:46:54.8739502Z * DONE (knitr) 2021-05-16T01:46:55.0901147Z * installing *source* package ‘xopen’ ... 2021-05-16T01:46:55.0908789Z ** package ‘xopen’ successfully unpacked and MD5 sums checked 2021-05-16T01:46:55.0910600Z ** using staged installation 2021-05-16T01:46:55.1056277Z ** R 2021-05-16T01:46:55.1083496Z ** inst 2021-05-16T01:46:55.1091820Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:46:55.3462813Z ** help 2021-05-16T01:46:55.3586460Z *** installing help indices 2021-05-16T01:46:55.3813596Z ** building package indices 2021-05-16T01:46:55.5678018Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:46:55.7392699Z ** testing if installed package can be loaded from final location 2021-05-16T01:46:55.9020755Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:46:55.9026209Z * DONE (xopen) 2021-05-16T01:46:56.3012952Z * installing *source* package ‘tibble’ ... 2021-05-16T01:46:56.3115086Z ** package ‘tibble’ successfully unpacked and MD5 sums checked 2021-05-16T01:46:56.3116173Z ** using staged installation 2021-05-16T01:46:56.3321523Z ** libs 2021-05-16T01:46:56.3373667Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c attributes.c -o attributes.o 2021-05-16T01:46:56.3899128Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-05-16T01:46:56.4594843Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:46:56.4961393Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c matrixToDataFrame.c -o matrixToDataFrame.o 2021-05-16T01:46:56.5958916Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:46:56.6198975Z installing to /home/runner/work/_temp/Library/00LOCK-tibble/00new/tibble/libs 2021-05-16T01:46:56.6212661Z ** R 2021-05-16T01:46:56.6371345Z ** inst 2021-05-16T01:46:56.6403117Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:46:58.2732847Z ** help 2021-05-16T01:46:58.3457498Z *** installing help indices 2021-05-16T01:46:58.3926911Z *** copying figures 2021-05-16T01:46:58.3931091Z ** building package indices 2021-05-16T01:46:58.6269000Z ** installing vignettes 2021-05-16T01:46:58.6352808Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:46:58.9775768Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:46:58.9960891Z ** testing if installed package can be loaded from final location 2021-05-16T01:46:59.3583953Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:46:59.3605895Z * DONE (tibble) 2021-05-16T01:46:59.6111314Z * installing *source* package ‘pkgbuild’ ... 2021-05-16T01:46:59.6130891Z ** package ‘pkgbuild’ successfully unpacked and MD5 sums checked 2021-05-16T01:46:59.6132936Z ** using staged installation 2021-05-16T01:46:59.6275196Z ** R 2021-05-16T01:46:59.6354131Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:47:00.7826289Z ** help 2021-05-16T01:47:00.8217619Z *** installing help indices 2021-05-16T01:47:00.8571194Z ** building package indices 2021-05-16T01:47:01.0731402Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:47:01.3346587Z ** testing if installed package can be loaded from final location 2021-05-16T01:47:01.6062032Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:47:01.6073510Z * DONE (pkgbuild) 2021-05-16T01:47:01.9899960Z * installing *source* package ‘roxygen2’ ... 2021-05-16T01:47:01.9971694Z ** package ‘roxygen2’ successfully unpacked and MD5 sums checked 2021-05-16T01:47:01.9973762Z ** using staged installation 2021-05-16T01:47:02.0161409Z ** libs 2021-05-16T01:47:02.0218723Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-16T01:47:06.5135159Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c escapeExamples.cpp -o escapeExamples.o 2021-05-16T01:47:09.4526803Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c isComplete.cpp -o isComplete.o 2021-05-16T01:47:12.4384104Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c leadingSpaces.cpp -o leadingSpaces.o 2021-05-16T01:47:15.3980316Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c parser2.cpp -o parser2.o 2021-05-16T01:47:20.0797255Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c wrapUsage.cpp -o wrapUsage.o 2021-05-16T01:47:23.1902437Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o roxygen2.so RcppExports.o escapeExamples.o isComplete.o leadingSpaces.o parser2.o wrapUsage.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:47:23.2852559Z installing to /home/runner/work/_temp/Library/00LOCK-roxygen2/00new/roxygen2/libs 2021-05-16T01:47:23.2892845Z ** R 2021-05-16T01:47:23.3177749Z ** inst 2021-05-16T01:47:23.3197074Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:47:27.0196003Z ** help 2021-05-16T01:47:27.0914549Z *** installing help indices 2021-05-16T01:47:27.1416990Z *** copying figures 2021-05-16T01:47:27.1418900Z ** building package indices 2021-05-16T01:47:27.3714661Z ** installing vignettes 2021-05-16T01:47:27.3804046Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:47:27.7215239Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:47:27.7431916Z ** testing if installed package can be loaded from final location 2021-05-16T01:47:28.1751667Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:47:28.1796277Z * DONE (roxygen2) 2021-05-16T01:47:28.4055673Z * installing *source* package ‘rematch2’ ... 2021-05-16T01:47:28.4108030Z ** package ‘rematch2’ successfully unpacked and MD5 sums checked 2021-05-16T01:47:28.4109099Z ** using staged installation 2021-05-16T01:47:28.4214278Z ** R 2021-05-16T01:47:28.4259799Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:47:28.9014886Z ** help 2021-05-16T01:47:28.9310596Z *** installing help indices 2021-05-16T01:47:28.9526380Z ** building package indices 2021-05-16T01:47:29.1560656Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:47:29.5061788Z ** testing if installed package can be loaded from final location 2021-05-16T01:47:29.8580829Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:47:29.8591469Z * DONE (rematch2) 2021-05-16T01:47:30.1301131Z * installing *source* package ‘rcmdcheck’ ... 2021-05-16T01:47:30.1327601Z ** package ‘rcmdcheck’ successfully unpacked and MD5 sums checked 2021-05-16T01:47:30.1329513Z ** using staged installation 2021-05-16T01:47:30.1477927Z ** R 2021-05-16T01:47:30.1559540Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:47:31.3312195Z ** help 2021-05-16T01:47:31.3682363Z *** installing help indices 2021-05-16T01:47:31.3970410Z ** building package indices 2021-05-16T01:47:31.6153430Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:47:31.8829638Z ** testing if installed package can be loaded from final location 2021-05-16T01:47:32.1847199Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:47:32.1860903Z * DONE (rcmdcheck) 2021-05-16T01:47:32.4383723Z * installing *source* package ‘waldo’ ... 2021-05-16T01:47:32.4404135Z ** package ‘waldo’ successfully unpacked and MD5 sums checked 2021-05-16T01:47:32.4406139Z ** using staged installation 2021-05-16T01:47:32.4538073Z ** R 2021-05-16T01:47:32.4596502Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:47:33.1247054Z ** help 2021-05-16T01:47:33.1395552Z *** installing help indices 2021-05-16T01:47:33.1577194Z *** copying figures 2021-05-16T01:47:33.1579523Z ** building package indices 2021-05-16T01:47:33.3526341Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:47:33.5880485Z ** testing if installed package can be loaded from final location 2021-05-16T01:47:33.8372002Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:47:33.8380752Z * DONE (waldo) 2021-05-16T01:47:34.3367422Z * installing *source* package ‘testthat’ ... 2021-05-16T01:47:34.3499069Z ** package ‘testthat’ successfully unpacked and MD5 sums checked 2021-05-16T01:47:34.3500194Z ** using staged installation 2021-05-16T01:47:34.3722932Z ** libs 2021-05-16T01:47:34.3793169Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:47:34.4300228Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o 2021-05-16T01:47:34.4834761Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-catch.cpp -o test-catch.o 2021-05-16T01:47:35.2746450Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-example.cpp -o test-example.o 2021-05-16T01:47:35.8861687Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-runner.cpp -o test-runner.o 2021-05-16T01:47:52.4069151Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o testthat.so init.o reassign.o test-catch.o test-example.o test-runner.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:47:52.5609454Z installing to /home/runner/work/_temp/Library/00LOCK-testthat/00new/testthat/libs 2021-05-16T01:47:52.5711153Z ** R 2021-05-16T01:47:52.6065963Z ** inst 2021-05-16T01:47:52.6097862Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:48:01.6398077Z ** help 2021-05-16T01:48:01.8606994Z *** installing help indices 2021-05-16T01:48:02.0317697Z *** copying figures 2021-05-16T01:48:02.0322268Z ** building package indices 2021-05-16T01:48:02.3756213Z ** installing vignettes 2021-05-16T01:48:02.3889380Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:48:02.6078501Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:48:02.6316054Z ** testing if installed package can be loaded from final location 2021-05-16T01:48:03.0588246Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:48:03.0671679Z * DONE (testthat) 2021-05-16T01:48:03.4296235Z * installing *source* package ‘devtools’ ... 2021-05-16T01:48:03.4344399Z ** package ‘devtools’ successfully unpacked and MD5 sums checked 2021-05-16T01:48:03.4345673Z ** using staged installation 2021-05-16T01:48:03.4612252Z ** R 2021-05-16T01:48:03.4734044Z ** inst 2021-05-16T01:48:03.4743875Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:48:05.0846912Z ** help 2021-05-16T01:48:05.1913221Z *** installing help indices 2021-05-16T01:48:05.2632565Z *** copying figures 2021-05-16T01:48:05.2636065Z ** building package indices 2021-05-16T01:48:05.5176168Z ** installing vignettes 2021-05-16T01:48:05.5249394Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:48:06.1692583Z ** testing if installed package can be loaded from final location 2021-05-16T01:48:06.8082116Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:48:06.8099634Z * DONE (devtools) 2021-05-16T01:48:06.8182005Z 2021-05-16T01:48:06.8182759Z The downloaded source packages are in 2021-05-16T01:48:06.8184021Z ‘/tmp/RtmplAXmpW/downloaded_packages’ 2021-05-16T01:48:06.9160734Z Downloading GitHub repo muschellij2/desc@HEAD 2021-05-16T01:48:07.8165244Z 2021-05-16T01:48:08.1154324Z 2021-05-16T01:48:08.1176581Z checking for file ‘/tmp/RtmplAXmpW/remotes7242213ffea8/muschellij2-desc-7be86f2/DESCRIPTION’ ... 2021-05-16T01:48:08.1240246Z 2021-05-16T01:48:08.1242781Z ✔ checking for file ‘/tmp/RtmplAXmpW/remotes7242213ffea8/muschellij2-desc-7be86f2/DESCRIPTION’ 2021-05-16T01:48:08.1354322Z 2021-05-16T01:48:08.1355174Z 2021-05-16T01:48:08.1356072Z ─ preparing ‘desc’: 2021-05-16T01:48:08.1356416Z 2021-05-16T01:48:08.1357010Z 2021-05-16T01:48:08.1489387Z checking DESCRIPTION meta-information ... 2021-05-16T01:48:08.1489965Z 2021-05-16T01:48:08.1490847Z ✔ checking DESCRIPTION meta-information 2021-05-16T01:48:08.2192402Z 2021-05-16T01:48:08.2193118Z 2021-05-16T01:48:08.2194560Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-16T01:48:08.2197709Z 2021-05-16T01:48:08.2354829Z 2021-05-16T01:48:08.2357343Z ─ checking for empty or unneeded directories 2021-05-16T01:48:08.2502333Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-16T01:48:08.2555878Z 2021-05-16T01:48:08.2556236Z 2021-05-16T01:48:08.2557002Z ─ building ‘desc_1.2.0.9000.tar.gz’ 2021-05-16T01:48:08.3304876Z 2021-05-16T01:48:08.3305711Z 2021-05-16T01:48:08.3306310Z 2021-05-16T01:48:08.3406426Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T01:48:08.3407845Z (as ‘lib’ is unspecified) 2021-05-16T01:48:08.6432281Z * installing *source* package ‘desc’ ... 2021-05-16T01:48:08.6463834Z ** using staged installation 2021-05-16T01:48:08.6636049Z ** R 2021-05-16T01:48:08.6772685Z ** inst 2021-05-16T01:48:08.6787399Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:48:10.1150726Z ** help 2021-05-16T01:48:10.2487006Z *** installing help indices 2021-05-16T01:48:10.3337215Z ** building package indices 2021-05-16T01:48:10.5969306Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:48:10.7757267Z ** testing if installed package can be loaded from final location 2021-05-16T01:48:10.9887040Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:48:10.9902366Z * DONE (desc) 2021-05-16T01:48:11.1789289Z 2021-05-16T01:48:11.1790347Z 2021-05-16T01:48:11.1801573Z checking for file ‘/tmp/RtmplAXmpW/remotes72425e6c0aae/muschellij2-ghtravis-0b26809/DESCRIPTION’ ... 2021-05-16T01:48:11.1824271Z 2021-05-16T01:48:11.1826606Z ✔ checking for file ‘/tmp/RtmplAXmpW/remotes72425e6c0aae/muschellij2-ghtravis-0b26809/DESCRIPTION’ 2021-05-16T01:48:11.1870154Z 2021-05-16T01:48:11.1895982Z 2021-05-16T01:48:11.1897854Z ─ preparing ‘ghtravis’: 2021-05-16T01:48:11.1906067Z 2021-05-16T01:48:11.1907949Z 2021-05-16T01:48:11.1980751Z checking DESCRIPTION meta-information ... 2021-05-16T01:48:11.2007185Z 2021-05-16T01:48:11.2009158Z ✔ checking DESCRIPTION meta-information 2021-05-16T01:48:11.2360466Z 2021-05-16T01:48:11.2407258Z 2021-05-16T01:48:11.2410639Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-16T01:48:11.2419546Z 2021-05-16T01:48:11.2444329Z 2021-05-16T01:48:11.2446257Z ─ checking for empty or unneeded directories 2021-05-16T01:48:11.2449210Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-16T01:48:11.2496150Z 2021-05-16T01:48:11.2523622Z 2021-05-16T01:48:11.2525913Z ─ building ‘ghtravis_0.15.1.tar.gz’ 2021-05-16T01:48:11.2722775Z 2021-05-16T01:48:11.2725230Z 2021-05-16T01:48:11.2726660Z 2021-05-16T01:48:11.3086825Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T01:48:11.3088299Z (as ‘lib’ is unspecified) 2021-05-16T01:48:11.5477417Z * installing *source* package ‘ghtravis’ ... 2021-05-16T01:48:11.5479701Z ** using staged installation 2021-05-16T01:48:11.5620455Z ** R 2021-05-16T01:48:11.5703489Z ** inst 2021-05-16T01:48:11.5712065Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:48:12.7478382Z ** help 2021-05-16T01:48:12.8046052Z *** installing help indices 2021-05-16T01:48:12.8483007Z ** building package indices 2021-05-16T01:48:13.0836932Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:48:13.7140446Z ** testing if installed package can be loaded from final location 2021-05-16T01:48:14.3416284Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:48:14.3425334Z * DONE (ghtravis) 2021-05-16T01:48:14.3512005Z Using github PAT from envvar GITHUB_PAT 2021-05-16T01:48:14.5539129Z Downloading GitHub repo muschellij2/aghast@HEAD 2021-05-16T01:48:15.4845188Z 2021-05-16T01:48:15.4847619Z Installing 5 packages: tidyselect, generics, cpp11, dplyr, tidyr 2021-05-16T01:48:15.4849968Z tidyselect (NA -> 1.1.1) [CRAN] 2021-05-16T01:48:15.4851896Z generics (NA -> 0.1.0) [CRAN] 2021-05-16T01:48:15.4853652Z cpp11 (NA -> 0.2.7) [CRAN] 2021-05-16T01:48:15.4855169Z dplyr (NA -> 1.0.6) [CRAN] 2021-05-16T01:48:15.4857087Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T01:48:15.4859287Z (as ‘lib’ is unspecified) 2021-05-16T01:48:15.4860573Z tidyr (NA -> 1.1.3) [CRAN] 2021-05-16T01:48:29.7927828Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyselect_1.1.1.tar.gz' 2021-05-16T01:48:30.8634581Z Content type 'binary/octet-stream' length 92124 bytes (89 KB) 2021-05-16T01:48:31.0554570Z ================================================== 2021-05-16T01:48:31.0555822Z downloaded 89 KB 2021-05-16T01:48:31.0556358Z 2021-05-16T01:48:31.0602228Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/generics_0.1.0.tar.gz' 2021-05-16T01:48:32.2726440Z Content type 'binary/octet-stream' length 118869 bytes (116 KB) 2021-05-16T01:48:32.4660314Z ================================================== 2021-05-16T01:48:32.4661994Z downloaded 116 KB 2021-05-16T01:48:32.4663331Z 2021-05-16T01:48:32.4706223Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cpp11_0.2.7.tar.gz' 2021-05-16T01:48:35.2439596Z Content type 'binary/octet-stream' length 200157 bytes (195 KB) 2021-05-16T01:48:35.4000388Z ================================================== 2021-05-16T01:48:35.4001787Z downloaded 195 KB 2021-05-16T01:48:35.4002523Z 2021-05-16T01:48:35.4055340Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/dplyr_1.0.6.tar.gz' 2021-05-16T01:48:38.8848534Z Content type 'binary/octet-stream' length 954544 bytes (932 KB) 2021-05-16T01:48:39.2906050Z ================================================== 2021-05-16T01:48:39.2907851Z downloaded 932 KB 2021-05-16T01:48:39.2909627Z 2021-05-16T01:48:39.2952661Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyr_1.1.3.tar.gz' 2021-05-16T01:48:40.3542588Z Content type 'binary/octet-stream' length 706784 bytes (690 KB) 2021-05-16T01:48:40.6942159Z ================================================== 2021-05-16T01:48:40.6945150Z downloaded 690 KB 2021-05-16T01:48:40.6947206Z 2021-05-16T01:48:40.9702443Z * installing *source* package ‘tidyselect’ ... 2021-05-16T01:48:40.9731892Z ** package ‘tidyselect’ successfully unpacked and MD5 sums checked 2021-05-16T01:48:40.9734093Z ** using staged installation 2021-05-16T01:48:40.9901221Z ** R 2021-05-16T01:48:40.9994523Z ** inst 2021-05-16T01:48:41.0006628Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:48:41.9279644Z ** help 2021-05-16T01:48:41.9844039Z *** installing help indices 2021-05-16T01:48:42.0238825Z ** building package indices 2021-05-16T01:48:42.2471996Z ** installing vignettes 2021-05-16T01:48:42.2530216Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:48:42.5208270Z ** testing if installed package can be loaded from final location 2021-05-16T01:48:42.7771276Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:48:42.7781898Z * DONE (tidyselect) 2021-05-16T01:48:43.0441476Z * installing *source* package ‘generics’ ... 2021-05-16T01:48:43.0473359Z ** package ‘generics’ successfully unpacked and MD5 sums checked 2021-05-16T01:48:43.0476041Z ** using staged installation 2021-05-16T01:48:43.0595423Z ** R 2021-05-16T01:48:43.0647077Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:48:43.3733947Z ** help 2021-05-16T01:48:43.4902553Z *** installing help indices 2021-05-16T01:48:43.5328563Z ** building package indices 2021-05-16T01:48:43.7669053Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:48:43.9519061Z ** testing if installed package can be loaded from final location 2021-05-16T01:48:44.1405463Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:48:44.1410981Z * DONE (generics) 2021-05-16T01:48:44.4153120Z * installing *source* package ‘cpp11’ ... 2021-05-16T01:48:44.4191058Z ** package ‘cpp11’ successfully unpacked and MD5 sums checked 2021-05-16T01:48:44.4193069Z ** using staged installation 2021-05-16T01:48:44.4351893Z ** R 2021-05-16T01:48:44.4398361Z ** inst 2021-05-16T01:48:44.4427223Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:48:44.8388678Z ** help 2021-05-16T01:48:44.8604419Z *** installing help indices 2021-05-16T01:48:44.8790365Z ** building package indices 2021-05-16T01:48:45.0672429Z ** installing vignettes 2021-05-16T01:48:45.0724351Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:48:45.2513467Z ** testing if installed package can be loaded from final location 2021-05-16T01:48:45.4301997Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:48:45.4311821Z * DONE (cpp11) 2021-05-16T01:48:45.9283377Z * installing *source* package ‘dplyr’ ... 2021-05-16T01:48:45.9411234Z ** package ‘dplyr’ successfully unpacked and MD5 sums checked 2021-05-16T01:48:45.9412388Z ** using staged installation 2021-05-16T01:48:45.9624606Z ** libs 2021-05-16T01:48:45.9673265Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c chop.cpp -o chop.o 2021-05-16T01:48:46.1058173Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c filter.cpp -o filter.o 2021-05-16T01:48:46.2776479Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c funs.cpp -o funs.o 2021-05-16T01:48:46.4083452Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c group_by.cpp -o group_by.o 2021-05-16T01:48:46.9556274Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c group_data.cpp -o group_data.o 2021-05-16T01:48:47.0641522Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c imports.cpp -o imports.o 2021-05-16T01:48:47.1677142Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.cpp -o init.o 2021-05-16T01:48:47.2762245Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mask.cpp -o mask.o 2021-05-16T01:48:47.4062770Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mutate.cpp -o mutate.o 2021-05-16T01:48:47.5215204Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c slice.cpp -o slice.o 2021-05-16T01:48:47.6166411Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c summarise.cpp -o summarise.o 2021-05-16T01:48:47.7753146Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o dplyr.so chop.o filter.o funs.o group_by.o group_data.o imports.o init.o mask.o mutate.o slice.o summarise.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:48:47.8395842Z installing to /home/runner/work/_temp/Library/00LOCK-dplyr/00new/dplyr/libs 2021-05-16T01:48:47.8405726Z ** R 2021-05-16T01:48:47.8848692Z ** data 2021-05-16T01:48:47.8852858Z *** moving datasets to lazyload DB 2021-05-16T01:48:47.9819997Z ** inst 2021-05-16T01:48:47.9846866Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:48:52.3314566Z ** help 2021-05-16T01:48:52.7829294Z *** installing help indices 2021-05-16T01:48:52.9976404Z *** copying figures 2021-05-16T01:48:52.9981964Z ** building package indices 2021-05-16T01:48:53.3594713Z ** installing vignettes 2021-05-16T01:48:53.3703265Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:48:53.8158589Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:48:53.8341459Z ** testing if installed package can be loaded from final location 2021-05-16T01:48:54.3794960Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:48:54.3796298Z * DONE (dplyr) 2021-05-16T01:48:54.7292445Z * installing *source* package ‘tidyr’ ... 2021-05-16T01:48:54.7365536Z ** package ‘tidyr’ successfully unpacked and MD5 sums checked 2021-05-16T01:48:54.7367566Z ** using staged installation 2021-05-16T01:48:54.7546332Z ** libs 2021-05-16T01:48:54.7624638Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c cpp11.cpp -o cpp11.o 2021-05-16T01:48:55.7304967Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c fill.cpp -o fill.o 2021-05-16T01:48:56.0667109Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c melt.cpp -o melt.o 2021-05-16T01:48:57.7336082Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c simplifyPieces.cpp -o simplifyPieces.o 2021-05-16T01:48:59.0328226Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tidyr.so cpp11.o fill.o melt.o simplifyPieces.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:48:59.1156654Z installing to /home/runner/work/_temp/Library/00LOCK-tidyr/00new/tidyr/libs 2021-05-16T01:48:59.1158156Z ** R 2021-05-16T01:48:59.1318614Z ** data 2021-05-16T01:48:59.1330741Z *** moving datasets to lazyload DB 2021-05-16T01:48:59.3250497Z ** inst 2021-05-16T01:48:59.3271818Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:49:00.9335280Z ** help 2021-05-16T01:49:01.0533155Z *** installing help indices 2021-05-16T01:49:01.1299578Z *** copying figures 2021-05-16T01:49:01.1304949Z ** building package indices 2021-05-16T01:49:01.3896288Z ** installing vignettes 2021-05-16T01:49:01.4007420Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:49:01.8899821Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:49:01.9101029Z ** testing if installed package can be loaded from final location 2021-05-16T01:49:02.4328878Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:49:02.4347249Z * DONE (tidyr) 2021-05-16T01:49:02.4437924Z 2021-05-16T01:49:02.4438851Z The downloaded source packages are in 2021-05-16T01:49:02.4440219Z ‘/tmp/RtmplAXmpW/downloaded_packages’ 2021-05-16T01:49:02.6384818Z 2021-05-16T01:49:02.6395952Z checking for file ‘/tmp/RtmplAXmpW/remotes72422e5037ad/muschellij2-aghast-0c3b853/DESCRIPTION’ ... 2021-05-16T01:49:02.6495225Z 2021-05-16T01:49:02.6496997Z ✔ checking for file ‘/tmp/RtmplAXmpW/remotes72422e5037ad/muschellij2-aghast-0c3b853/DESCRIPTION’ 2021-05-16T01:49:02.6497796Z 2021-05-16T01:49:02.6498112Z 2021-05-16T01:49:02.6498706Z ─ preparing ‘aghast’: 2021-05-16T01:49:02.6595899Z checking DESCRIPTION meta-information ... 2021-05-16T01:49:02.6601592Z 2021-05-16T01:49:02.6603672Z ✔ checking DESCRIPTION meta-information 2021-05-16T01:49:02.6862598Z 2021-05-16T01:49:02.6902217Z 2021-05-16T01:49:02.6905923Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-16T01:49:02.6919226Z 2021-05-16T01:49:02.6957882Z 2021-05-16T01:49:02.6961262Z ─ checking for empty or unneeded directories 2021-05-16T01:49:02.6965947Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-16T01:49:02.6973586Z 2021-05-16T01:49:02.6997628Z 2021-05-16T01:49:02.6999435Z ─ building ‘aghast_0.2.1.tar.gz’ 2021-05-16T01:49:02.7076068Z 2021-05-16T01:49:02.7078247Z 2021-05-16T01:49:02.7079481Z 2021-05-16T01:49:02.7156509Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T01:49:02.7157771Z (as ‘lib’ is unspecified) 2021-05-16T01:49:02.9237812Z * installing *source* package ‘aghast’ ... 2021-05-16T01:49:02.9241392Z ** using staged installation 2021-05-16T01:49:02.9401767Z ** R 2021-05-16T01:49:02.9458737Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:49:03.3778687Z ** help 2021-05-16T01:49:03.4071109Z *** installing help indices 2021-05-16T01:49:03.4286295Z ** building package indices 2021-05-16T01:49:03.6262354Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:49:03.8071981Z ** testing if installed package can be loaded from final location 2021-05-16T01:49:03.9857234Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:49:03.9864005Z * DONE (aghast) 2021-05-16T01:49:03.9951778Z Installing 1 packages: covr 2021-05-16T01:49:03.9961641Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-16T01:49:03.9962617Z (as ‘lib’ is unspecified) 2021-05-16T01:49:18.0012780Z also installing the dependencies ‘lazyeval’, ‘rex’ 2021-05-16T01:49:18.0013696Z 2021-05-16T01:49:18.0023435Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lazyeval_0.2.2.tar.gz' 2021-05-16T01:49:22.0601526Z Content type 'application/x-tar' length 83462 bytes (81 KB) 2021-05-16T01:49:22.1111298Z ================================================== 2021-05-16T01:49:22.1112821Z downloaded 81 KB 2021-05-16T01:49:22.1114119Z 2021-05-16T01:49:22.1175121Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rex_1.2.0.tar.gz' 2021-05-16T01:49:23.1779868Z Content type 'binary/octet-stream' length 91701 bytes (89 KB) 2021-05-16T01:49:23.2520708Z ================================================== 2021-05-16T01:49:23.2522025Z downloaded 89 KB 2021-05-16T01:49:23.2522746Z 2021-05-16T01:49:23.2561573Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/covr_3.5.1.tar.gz' 2021-05-16T01:49:24.6604757Z Content type 'binary/octet-stream' length 147467 bytes (144 KB) 2021-05-16T01:49:24.7738515Z ================================================== 2021-05-16T01:49:24.7739928Z downloaded 144 KB 2021-05-16T01:49:24.7740699Z 2021-05-16T01:49:25.0387176Z * installing *source* package ‘lazyeval’ ... 2021-05-16T01:49:25.0418141Z ** package ‘lazyeval’ successfully unpacked and MD5 sums checked 2021-05-16T01:49:25.0420066Z ** using staged installation 2021-05-16T01:49:25.0558775Z ** libs 2021-05-16T01:49:25.0620295Z 2021-05-16T01:49:25.0622019Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c expr.c -o expr.o 2021-05-16T01:49:25.1316537Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:49:25.1709793Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c interp.c -o interp.o 2021-05-16T01:49:25.2338283Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c lazy.c -o lazy.o 2021-05-16T01:49:25.3074707Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c name.c -o name.o 2021-05-16T01:49:25.3731858Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-16T01:49:25.4402114Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o lazyeval.so expr.o init.o interp.o lazy.o name.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:49:25.4676668Z installing to /home/runner/work/_temp/Library/00LOCK-lazyeval/00new/lazyeval/libs 2021-05-16T01:49:25.4678062Z ** R 2021-05-16T01:49:25.4728983Z ** inst 2021-05-16T01:49:25.4741822Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:49:25.9411761Z ** help 2021-05-16T01:49:25.9969697Z *** installing help indices 2021-05-16T01:49:26.0394103Z ** building package indices 2021-05-16T01:49:26.2674850Z ** installing vignettes 2021-05-16T01:49:26.2727376Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:49:26.4525398Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:49:26.4706072Z ** testing if installed package can be loaded from final location 2021-05-16T01:49:26.6389478Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:49:26.6401630Z * DONE (lazyeval) 2021-05-16T01:49:26.8759925Z * installing *source* package ‘rex’ ... 2021-05-16T01:49:26.8779155Z ** package ‘rex’ successfully unpacked and MD5 sums checked 2021-05-16T01:49:26.8780926Z ** using staged installation 2021-05-16T01:49:26.8900037Z ** R 2021-05-16T01:49:26.8954888Z ** inst 2021-05-16T01:49:26.8964061Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:49:27.3832297Z ** help 2021-05-16T01:49:27.4330728Z *** installing help indices 2021-05-16T01:49:27.4703243Z ** building package indices 2021-05-16T01:49:27.6952232Z ** installing vignettes 2021-05-16T01:49:27.6969947Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:49:27.8733907Z ** testing if installed package can be loaded from final location 2021-05-16T01:49:28.0520239Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:49:28.0527993Z * DONE (rex) 2021-05-16T01:49:28.4140355Z * installing *source* package ‘covr’ ... 2021-05-16T01:49:28.4197503Z ** package ‘covr’ successfully unpacked and MD5 sums checked 2021-05-16T01:49:28.4199593Z ** using staged installation 2021-05-16T01:49:28.4379418Z ** libs 2021-05-16T01:49:28.4444347Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o 2021-05-16T01:49:28.4974543Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o covr.so reassign.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:49:28.5153319Z installing to /home/runner/work/_temp/Library/00LOCK-covr/00new/covr/libs 2021-05-16T01:49:28.5166955Z ** R 2021-05-16T01:49:28.5294361Z ** inst 2021-05-16T01:49:28.5315421Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:49:29.7665812Z ** help 2021-05-16T01:49:29.8296869Z *** installing help indices 2021-05-16T01:49:29.8792001Z *** copying figures 2021-05-16T01:49:29.8794214Z ** building package indices 2021-05-16T01:49:30.1274780Z ** installing vignettes 2021-05-16T01:49:30.1344174Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:49:30.3495140Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:49:30.3770906Z ** testing if installed package can be loaded from final location 2021-05-16T01:49:30.6171870Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:49:30.6190258Z * DONE (covr) 2021-05-16T01:49:30.6284212Z 2021-05-16T01:49:30.6286563Z The downloaded source packages are in 2021-05-16T01:49:30.6288112Z ‘/tmp/RtmplAXmpW/downloaded_packages’ 2021-05-16T01:49:30.6438403Z ##[group]Run Rscript -e "tic::before_install()" 2021-05-16T01:49:30.6439099Z Rscript -e "tic::before_install()" 2021-05-16T01:49:30.6484584Z shell: /usr/bin/bash -e {0} 2021-05-16T01:49:30.6484992Z env: 2021-05-16T01:49:30.6485489Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:49:30.6485960Z TIC_DEPLOY_KEY: 2021-05-16T01:49:30.6486838Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:49:30.6488578Z GITHUB_PAT: *** 2021-05-16T01:49:30.6488997Z COVERALLS_TOKEN: 2021-05-16T01:49:30.6489483Z continue-on-error: true 2021-05-16T01:49:30.6489968Z VDIFFR_RUN_TESTS: 2021-05-16T01:49:30.6490446Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:49:30.6490896Z TZ: UTC 2021-05-16T01:49:30.6491295Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:49:30.6491783Z NOT_CRAN: true 2021-05-16T01:49:30.6492335Z ##[endgroup] 2021-05-16T01:49:30.9316152Z ✔ Loading tic stage configuration from tic.R 2021-05-16T01:49:31.0622539Z Running before_install: step_install_remote_binaries() 2021-05-16T01:49:31.5593162Z ##[group]Run remotes::install_deps(dependencies = TRUE) 2021-05-16T01:49:31.5594201Z remotes::install_deps(dependencies = TRUE) 2021-05-16T01:49:31.5594874Z remotes::install_cran("rcmdcheck") 2021-05-16T01:49:31.5595479Z remotes::install_cran("markdown") 2021-05-16T01:49:31.5602978Z shell: /usr/local/bin/Rscript {0} 2021-05-16T01:49:31.5603401Z env: 2021-05-16T01:49:31.5603844Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:49:31.5604327Z TIC_DEPLOY_KEY: 2021-05-16T01:49:31.5605200Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:49:31.5606993Z GITHUB_PAT: *** 2021-05-16T01:49:31.5607443Z COVERALLS_TOKEN: 2021-05-16T01:49:31.5607960Z continue-on-error: true 2021-05-16T01:49:31.5608491Z VDIFFR_RUN_TESTS: 2021-05-16T01:49:31.5619232Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:49:31.5619740Z TZ: UTC 2021-05-16T01:49:31.5620158Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:49:31.5620685Z NOT_CRAN: true 2021-05-16T01:49:31.5621102Z ##[endgroup] 2021-05-16T01:49:49.6138504Z base64enc (NA -> 0.1-3 ) [CRAN] 2021-05-16T01:49:49.6140816Z tinytex (NA -> 0.31 ) [CRAN] 2021-05-16T01:49:49.6142508Z htmltools (NA -> 0.5.1.1) [CRAN] 2021-05-16T01:49:49.6144112Z tiff (NA -> 0.1-8 ) [CRAN] 2021-05-16T01:49:49.6145740Z rmarkdown (NA -> 2.8 ) [CRAN] 2021-05-16T01:49:49.6147306Z png (NA -> 0.1-7 ) [CRAN] 2021-05-16T01:49:49.6148838Z zoo (NA -> 1.8-9 ) [CRAN] 2021-05-16T01:49:49.6165851Z Installing 7 packages: base64enc, tinytex, htmltools, tiff, rmarkdown, png, zoo 2021-05-16T01:49:49.6178845Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-16T01:49:49.6179976Z (as ‘lib’ is unspecified) 2021-05-16T01:50:04.2052791Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/base64enc_0.1-3.tar.gz' 2021-05-16T01:50:08.1514449Z Content type 'application/x-tar' length 7843 bytes 2021-05-16T01:50:08.1569759Z ================================================== 2021-05-16T01:50:08.1571007Z downloaded 7843 bytes 2021-05-16T01:50:08.1571927Z 2021-05-16T01:50:08.1617890Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tinytex_0.31.tar.gz' 2021-05-16T01:50:10.7721499Z Content type 'binary/octet-stream' length 29350 bytes (28 KB) 2021-05-16T01:50:10.7723580Z ================================================== 2021-05-16T01:50:10.7724751Z downloaded 28 KB 2021-05-16T01:50:10.7725589Z 2021-05-16T01:50:10.7773197Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/htmltools_0.5.1.1.tar.gz' 2021-05-16T01:50:14.1419416Z Content type 'binary/octet-stream' length 72110 bytes (70 KB) 2021-05-16T01:50:14.1441908Z ================================================== 2021-05-16T01:50:14.1445068Z downloaded 70 KB 2021-05-16T01:50:14.1446148Z 2021-05-16T01:50:14.1490202Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tiff_0.1-8.tar.gz' 2021-05-16T01:50:15.4360522Z Content type 'binary/octet-stream' length 68197 bytes (66 KB) 2021-05-16T01:50:15.5100365Z ================================================== 2021-05-16T01:50:15.5101957Z downloaded 66 KB 2021-05-16T01:50:15.5102836Z 2021-05-16T01:50:15.5150023Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rmarkdown_2.8.tar.gz' 2021-05-16T01:50:16.7360318Z Content type 'binary/octet-stream' length 3236609 bytes (3.1 MB) 2021-05-16T01:50:17.1286904Z ================================================== 2021-05-16T01:50:17.1288426Z downloaded 3.1 MB 2021-05-16T01:50:17.1289313Z 2021-05-16T01:50:17.1325746Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/png_0.1-7.tar.gz' 2021-05-16T01:50:18.2933911Z Content type 'application/x-tar' length 24973 bytes (24 KB) 2021-05-16T01:50:18.3634651Z ================================================== 2021-05-16T01:50:18.3635605Z downloaded 24 KB 2021-05-16T01:50:18.3636160Z 2021-05-16T01:50:18.3760983Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/zoo_1.8-9.tar.gz' 2021-05-16T01:50:19.6039798Z Content type 'binary/octet-stream' length 792671 bytes (774 KB) 2021-05-16T01:50:19.9058169Z ================================================== 2021-05-16T01:50:19.9059221Z downloaded 774 KB 2021-05-16T01:50:19.9059756Z 2021-05-16T01:50:20.1089600Z * installing *source* package ‘base64enc’ ... 2021-05-16T01:50:20.1097903Z ** package ‘base64enc’ successfully unpacked and MD5 sums checked 2021-05-16T01:50:20.1099752Z ** using staged installation 2021-05-16T01:50:20.1211479Z ** libs 2021-05-16T01:50:20.1264442Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-16T01:50:20.2490899Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c uriencode.c -o uriencode.o 2021-05-16T01:50:20.3344107Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-16T01:50:20.4104910Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o base64enc.so base64.o uriencode.o utf8.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:50:20.4356058Z installing to /home/runner/work/_temp/Library/00LOCK-base64enc/00new/base64enc/libs 2021-05-16T01:50:20.4369618Z ** R 2021-05-16T01:50:20.4412403Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:50:20.6942671Z ** help 2021-05-16T01:50:20.7179206Z *** installing help indices 2021-05-16T01:50:20.7351094Z ** building package indices 2021-05-16T01:50:20.9265074Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:50:21.1074758Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:50:21.1255596Z ** testing if installed package can be loaded from final location 2021-05-16T01:50:21.2946405Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:50:21.2956675Z * DONE (base64enc) 2021-05-16T01:50:21.5120500Z * installing *source* package ‘tinytex’ ... 2021-05-16T01:50:21.5131755Z ** package ‘tinytex’ successfully unpacked and MD5 sums checked 2021-05-16T01:50:21.5133893Z ** using staged installation 2021-05-16T01:50:21.5325504Z ** R 2021-05-16T01:50:21.5402369Z ** inst 2021-05-16T01:50:21.5409695Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:50:22.2234490Z ** help 2021-05-16T01:50:22.2579774Z *** installing help indices 2021-05-16T01:50:22.2859691Z ** building package indices 2021-05-16T01:50:22.5053647Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:50:22.6895163Z ** testing if installed package can be loaded from final location 2021-05-16T01:50:22.8763279Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:50:22.8772092Z * DONE (tinytex) 2021-05-16T01:50:23.0947983Z * installing *source* package ‘tiff’ ... 2021-05-16T01:50:23.0963470Z ** package ‘tiff’ successfully unpacked and MD5 sums checked 2021-05-16T01:50:23.0965561Z ** using staged installation 2021-05-16T01:50:23.3314301Z checking for pkg-config... /usr/bin/pkg-config 2021-05-16T01:50:23.3315215Z checking for gcc... gcc 2021-05-16T01:50:23.3959045Z checking whether the C compiler works... yes 2021-05-16T01:50:23.3961093Z checking for C compiler default output file name... a.out 2021-05-16T01:50:23.4343063Z checking for suffix of executables... 2021-05-16T01:50:23.4838358Z checking whether we are cross compiling... no 2021-05-16T01:50:23.5076850Z checking for suffix of object files... o 2021-05-16T01:50:23.5301584Z checking whether we are using the GNU C compiler... yes 2021-05-16T01:50:23.5522690Z checking whether gcc accepts -g... yes 2021-05-16T01:50:23.5912897Z checking for gcc option to accept ISO C89... none needed 2021-05-16T01:50:23.5916536Z checking how to run the C preprocessor... gcc -E 2021-05-16T01:50:23.6148788Z checking for grep that handles long lines and -e... /usr/bin/grep 2021-05-16T01:50:23.6166872Z checking for egrep... /usr/bin/grep -E 2021-05-16T01:50:23.7283924Z checking for ANSI C header files... yes 2021-05-16T01:50:23.7601742Z checking for sys/types.h... yes 2021-05-16T01:50:23.7939827Z checking for sys/stat.h... yes 2021-05-16T01:50:23.8280092Z checking for stdlib.h... yes 2021-05-16T01:50:23.8633757Z checking for string.h... yes 2021-05-16T01:50:23.8992027Z checking for memory.h... yes 2021-05-16T01:50:23.9348838Z checking for strings.h... yes 2021-05-16T01:50:23.9700660Z checking for inttypes.h... yes 2021-05-16T01:50:24.0065801Z checking for stdint.h... yes 2021-05-16T01:50:24.0444134Z checking for unistd.h... yes 2021-05-16T01:50:24.0486141Z checking for unistd.h... (cached) yes 2021-05-16T01:50:24.1008258Z checking for TIFFClientOpen in -ltiff... yes 2021-05-16T01:50:24.1025721Z configure: PKG_CPPFLAGS: -I/usr/local/include 2021-05-16T01:50:24.1026915Z configure: PKG_LIBS : -ltiff 2021-05-16T01:50:24.2441561Z checking tiff.h usability... yes 2021-05-16T01:50:24.2529802Z checking tiff.h presence... yes 2021-05-16T01:50:24.2530854Z checking for tiff.h... yes 2021-05-16T01:50:24.2926354Z checking tiffio.h usability... yes 2021-05-16T01:50:24.3029018Z checking tiffio.h presence... yes 2021-05-16T01:50:24.3029876Z checking for tiffio.h... yes 2021-05-16T01:50:24.3276755Z configure: creating ./config.status 2021-05-16T01:50:24.4077335Z config.status: creating src/Makevars 2021-05-16T01:50:24.4529895Z ** libs 2021-05-16T01:50:24.4643289Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -fpic -g -O2 -c common.c -o common.o 2021-05-16T01:50:24.5622774Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -fpic -g -O2 -c read.c -o read.o 2021-05-16T01:50:24.9812710Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -fpic -g -O2 -c reg.c -o reg.o 2021-05-16T01:50:25.0241966Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -fpic -g -O2 -c write.c -o write.o 2021-05-16T01:50:25.1917365Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tiff.so common.o read.o reg.o write.o -ltiff -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:50:25.2186770Z installing to /home/runner/work/_temp/Library/00LOCK-tiff/00new/tiff/libs 2021-05-16T01:50:25.2201443Z ** R 2021-05-16T01:50:25.2225714Z ** inst 2021-05-16T01:50:25.2233941Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:50:25.4560160Z ** help 2021-05-16T01:50:25.4715194Z *** installing help indices 2021-05-16T01:50:25.4879688Z ** building package indices 2021-05-16T01:50:25.6821811Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:50:25.8603868Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:50:25.8781759Z ** testing if installed package can be loaded from final location 2021-05-16T01:50:26.0536141Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:50:26.0541518Z * DONE (tiff) 2021-05-16T01:50:26.2681104Z * installing *source* package ‘png’ ... 2021-05-16T01:50:26.2690348Z ** package ‘png’ successfully unpacked and MD5 sums checked 2021-05-16T01:50:26.2692148Z ** using staged installation 2021-05-16T01:50:26.2791762Z ** libs 2021-05-16T01:50:26.2843216Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include `libpng-config --cflags` -fpic -g -O2 -c read.c -o read.o 2021-05-16T01:50:26.5074850Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include `libpng-config --cflags` -fpic -g -O2 -c write.c -o write.o 2021-05-16T01:50:26.7049050Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o png.so read.o write.o -lpng16 -lm -lz -lm -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:50:26.7364368Z installing to /home/runner/work/_temp/Library/00LOCK-png/00new/png/libs 2021-05-16T01:50:26.7379481Z ** R 2021-05-16T01:50:26.7406286Z ** inst 2021-05-16T01:50:26.7414015Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:50:26.9732389Z ** help 2021-05-16T01:50:26.9952878Z *** installing help indices 2021-05-16T01:50:27.0107934Z ** building package indices 2021-05-16T01:50:27.2058986Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:50:27.3866883Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:50:27.4052510Z ** testing if installed package can be loaded from final location 2021-05-16T01:50:27.5742835Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:50:27.5752795Z * DONE (png) 2021-05-16T01:50:27.9001843Z * installing *source* package ‘zoo’ ... 2021-05-16T01:50:27.9063333Z ** package ‘zoo’ successfully unpacked and MD5 sums checked 2021-05-16T01:50:27.9065323Z ** using staged installation 2021-05-16T01:50:27.9235097Z ** libs 2021-05-16T01:50:27.9304560Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fpic -g -O2 -c coredata.c -o coredata.o 2021-05-16T01:50:28.0064472Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:50:28.0532991Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fpic -g -O2 -c lag.c -o lag.o 2021-05-16T01:50:28.3008681Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o zoo.so coredata.o init.o lag.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:50:28.3242388Z installing to /home/runner/work/_temp/Library/00LOCK-zoo/00new/zoo/libs 2021-05-16T01:50:28.3255735Z ** R 2021-05-16T01:50:28.3492283Z ** demo 2021-05-16T01:50:28.3498093Z ** inst 2021-05-16T01:50:28.3524449Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:50:31.0275540Z ** help 2021-05-16T01:50:31.1916262Z *** installing help indices 2021-05-16T01:50:31.3234715Z ** building package indices 2021-05-16T01:50:31.6021758Z ** installing vignettes 2021-05-16T01:50:31.6133677Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:50:31.8451913Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:50:31.8644517Z ** testing if installed package can be loaded from final location 2021-05-16T01:50:32.1436742Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:50:32.1469141Z * DONE (zoo) 2021-05-16T01:50:32.4127049Z * installing *source* package ‘htmltools’ ... 2021-05-16T01:50:32.4152268Z ** package ‘htmltools’ successfully unpacked and MD5 sums checked 2021-05-16T01:50:32.4154375Z ** using staged installation 2021-05-16T01:50:32.4311674Z ** libs 2021-05-16T01:50:32.4369387Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-16T01:50:32.4847288Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c template.c -o template.o 2021-05-16T01:50:32.5982442Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o htmltools.so init.o template.o -L/opt/R/devel/lib/R/lib -lR 2021-05-16T01:50:32.6211570Z installing to /home/runner/work/_temp/Library/00LOCK-htmltools/00new/htmltools/libs 2021-05-16T01:50:32.6223611Z ** R 2021-05-16T01:50:32.6355978Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:50:33.9776859Z ** help 2021-05-16T01:50:34.0596094Z *** installing help indices 2021-05-16T01:50:34.1175497Z ** building package indices 2021-05-16T01:50:34.3725791Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:50:34.5863730Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-16T01:50:34.6051295Z ** testing if installed package can be loaded from final location 2021-05-16T01:50:34.8390851Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:50:34.8405819Z * DONE (htmltools) 2021-05-16T01:50:35.6430935Z * installing *source* package ‘rmarkdown’ ... 2021-05-16T01:50:35.6746142Z ** package ‘rmarkdown’ successfully unpacked and MD5 sums checked 2021-05-16T01:50:35.6747591Z ** using staged installation 2021-05-16T01:50:35.7028404Z ** R 2021-05-16T01:50:35.7438140Z ** inst 2021-05-16T01:50:35.7667966Z ** byte-compile and prepare package for lazy loading 2021-05-16T01:50:38.8117932Z ** help 2021-05-16T01:50:39.0047666Z *** installing help indices 2021-05-16T01:50:39.1466332Z *** copying figures 2021-05-16T01:50:39.1468142Z ** building package indices 2021-05-16T01:50:39.4514775Z ** installing vignettes 2021-05-16T01:50:39.4587539Z ** testing if installed package can be loaded from temporary location 2021-05-16T01:50:39.7002330Z ** testing if installed package can be loaded from final location 2021-05-16T01:50:40.0210260Z ** testing if installed package keeps a record of temporary installation path 2021-05-16T01:50:40.0268042Z * DONE (rmarkdown) 2021-05-16T01:50:40.0435139Z 2021-05-16T01:50:40.0436254Z The downloaded source packages are in 2021-05-16T01:50:40.0437731Z ‘/tmp/RtmpiCgo6L/downloaded_packages’ 2021-05-16T01:50:54.2707443Z Skipping install of 'rcmdcheck' from a cran remote, the SHA1 (1.3.3) has not changed since last install. 2021-05-16T01:50:54.2709183Z Use `force = TRUE` to force installation 2021-05-16T01:50:54.2718010Z Skipping install of 'markdown' from a cran remote, the SHA1 (1.1) has not changed since last install. 2021-05-16T01:50:54.2719595Z Use `force = TRUE` to force installation 2021-05-16T01:50:54.2820332Z ##[group]Run options(width = 100) 2021-05-16T01:50:54.2820907Z options(width = 100) 2021-05-16T01:50:54.2821511Z pkgs <- installed.packages()[, "Package"] 2021-05-16T01:50:54.2822284Z sessioninfo::session_info(pkgs, include_base = TRUE) 2021-05-16T01:50:54.2829860Z shell: /usr/local/bin/Rscript {0} 2021-05-16T01:50:54.2830272Z env: 2021-05-16T01:50:54.2830726Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:50:54.2831201Z TIC_DEPLOY_KEY: 2021-05-16T01:50:54.2832076Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:50:54.2834720Z GITHUB_PAT: *** 2021-05-16T01:50:54.2835132Z COVERALLS_TOKEN: 2021-05-16T01:50:54.2835634Z continue-on-error: true 2021-05-16T01:50:54.2836115Z VDIFFR_RUN_TESTS: 2021-05-16T01:50:54.2836626Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:50:54.2837068Z TZ: UTC 2021-05-16T01:50:54.2837467Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:50:54.2838005Z NOT_CRAN: true 2021-05-16T01:50:54.2838386Z ##[endgroup] 2021-05-16T01:50:54.7327341Z ─ Session info ─────────────────────────────────────────────────────────────────────────────────── 2021-05-16T01:50:54.7328613Z setting value 2021-05-16T01:50:54.7330374Z version R Under development (unstable) (2021-05-14 r80296) 2021-05-16T01:50:54.7331669Z os Ubuntu 20.04.2 LTS 2021-05-16T01:50:54.7333099Z system x86_64, linux-gnu 2021-05-16T01:50:54.7334173Z ui X11 2021-05-16T01:50:54.7335995Z language (EN) 2021-05-16T01:50:54.7337457Z collate C.UTF-8 2021-05-16T01:50:54.7338930Z ctype C.UTF-8 2021-05-16T01:50:54.7339954Z tz UTC 2021-05-16T01:50:54.7341298Z date 2021-05-16 2021-05-16T01:50:54.7341856Z 2021-05-16T01:50:54.7343513Z ─ Packages ─────────────────────────────────────────────────────────────────────────────────────── 2021-05-16T01:50:54.7344897Z package * version date lib source 2021-05-16T01:50:54.7346754Z aghast 0.2.1 2021-05-16 [1] Github (muschellij2/aghast@0c3b853) 2021-05-16T01:50:54.7348523Z askpass 1.1 2019-01-13 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7350083Z base * 4.2.0 2021-05-15 [2] local 2021-05-16T01:50:54.7351658Z base64enc 0.1-3 2015-07-28 [1] RSPM (R 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2021-05-16T01:50:54.7417941Z htmltools 0.5.1.1 2021-01-22 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7418750Z httr 1.4.2 2020-07-20 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7419547Z ini 0.3.1 2018-05-20 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7420351Z jsonlite 1.7.2 2020-12-09 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7421215Z KernSmooth 2.23-20 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-16T01:50:54.7422059Z knitr 1.33 2021-04-24 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7422870Z lattice 0.20-44 2021-05-02 [2] CRAN (R 4.2.0) 2021-05-16T01:50:54.7423715Z lazyeval 0.2.2 2019-03-15 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7424631Z lifecycle 1.0.0 2021-02-15 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7425493Z magrittr 2.0.1 2020-11-17 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7426327Z markdown 1.1 2019-08-07 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7427134Z MASS 7.3-54 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-16T01:50:54.7427943Z Matrix 1.3-3 2021-05-04 [2] CRAN (R 4.2.0) 2021-05-16T01:50:54.7428755Z memoise 2.0.0 2021-01-26 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7429575Z methods * 4.2.0 2021-05-15 [2] local 2021-05-16T01:50:54.7430373Z mgcv 1.8-35 2021-04-18 [2] CRAN (R 4.2.0) 2021-05-16T01:50:54.7431175Z mime 0.10 2021-02-13 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7431982Z nlme 3.1-152 2021-02-04 [2] CRAN (R 4.2.0) 2021-05-16T01:50:54.7432779Z nnet 7.3-16 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-16T01:50:54.7442802Z openssl 1.4.4 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7444156Z parallel 4.2.0 2021-05-15 [2] local 2021-05-16T01:50:54.7445021Z pillar 1.6.0 2021-04-13 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7445870Z pkgbuild 1.2.0 2020-12-15 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7446719Z pkgconfig 2.0.3 2019-09-22 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7447562Z pkgload 1.2.1 2021-04-06 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7448382Z png 0.1-7 2013-12-03 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7449214Z praise 1.0.0 2015-08-11 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7450061Z prettyunits 1.1.1 2020-01-24 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7450932Z processx 3.5.2 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7451753Z ps 1.6.0 2021-02-28 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7452545Z purrr 0.3.4 2020-04-17 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7453347Z R6 2.5.0 2020-10-28 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7454152Z rappdirs 0.3.3 2021-01-31 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7455002Z rcmdcheck 1.3.3 2019-05-07 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7455829Z Rcpp 1.0.6 2021-01-15 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7456646Z rematch2 2.1.2 2020-05-01 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7457649Z remotes 2.3.0 2021-04-01 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7458457Z rex 1.2.0 2020-04-21 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7459255Z rlang 0.4.11 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7460076Z rmarkdown 2.8 2021-05-07 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7460917Z roxygen2 7.1.1 2020-06-27 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7461739Z rpart 4.1-15 2019-04-12 [2] CRAN (R 4.2.0) 2021-05-16T01:50:54.7462562Z rprojroot 2.0.2 2020-11-15 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7463421Z rstudioapi 0.13 2020-11-12 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7464260Z rversions 2.0.2 2020-05-25 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7465121Z sessioninfo 1.1.1 2018-11-05 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7466048Z spatial 7.3-14 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-16T01:50:54.7466926Z splines 4.2.0 2021-05-15 [2] local 2021-05-16T01:50:54.7467748Z stats * 4.2.0 2021-05-15 [2] local 2021-05-16T01:50:54.7468543Z stats4 4.2.0 2021-05-15 [2] local 2021-05-16T01:50:54.7469363Z stringi 1.6.1 2021-05-10 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7470176Z stringr 1.4.0 2019-02-10 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7471015Z survival 3.2-11 2021-04-26 [2] CRAN (R 4.2.0) 2021-05-16T01:50:54.7471828Z sys 3.4 2020-07-23 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7472681Z sysreqs 1.0.0.9000 2021-05-16 [1] Github (r-hub/sysreqs@f068afa) 2021-05-16T01:50:54.7473550Z tcltk 4.2.0 2021-05-15 [2] local 2021-05-16T01:50:54.7474503Z testthat 3.0.2 2021-02-14 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7475345Z tibble 3.1.1 2021-04-18 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7476216Z tic 0.10.0 2021-05-16 [1] Github (ropensci/tic@3b4dfb8) 2021-05-16T01:50:54.7477066Z tidyr 1.1.3 2021-03-03 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7491662Z tidyselect 1.1.1 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7493017Z tiff 0.1-8 2021-03-31 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7493920Z tinytex 0.31 2021-03-30 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7494795Z tools 4.2.0 2021-05-15 [2] local 2021-05-16T01:50:54.7495705Z usethis 2.0.1 2021-02-10 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7496588Z utf8 1.2.1 2021-03-12 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7497451Z utils * 4.2.0 2021-05-15 [2] local 2021-05-16T01:50:54.7498320Z vctrs 0.3.8 2021-04-29 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7499176Z waldo 0.2.5 2021-03-08 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7500061Z whisker 0.4 2019-08-28 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7500944Z withr 2.4.2 2021-04-18 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7501794Z xfun 0.23 2021-05-15 [1] CRAN (R 4.2.0) 2021-05-16T01:50:54.7502652Z xml2 1.3.2 2020-04-23 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7503505Z xopen 1.0.0 2018-09-17 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7504634Z yaml 2.2.1 2020-02-01 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7505555Z zip 2.1.1 2020-08-27 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7506361Z zoo 1.8-9 2021-03-09 [1] RSPM (R 4.2.0) 2021-05-16T01:50:54.7506680Z 2021-05-16T01:50:54.7507148Z [1] /home/runner/work/_temp/Library 2021-05-16T01:50:54.7507702Z [2] /opt/R/devel/lib/R/library 2021-05-16T01:50:54.7538369Z ##[group]Run Rscript -e 'tic::script()' 2021-05-16T01:50:54.7538978Z Rscript -e 'tic::script()' 2021-05-16T01:50:54.7539366Z ls -l check 2021-05-16T01:50:54.7583818Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-05-16T01:50:54.7584338Z env: 2021-05-16T01:50:54.7584781Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:50:54.7585256Z TIC_DEPLOY_KEY: 2021-05-16T01:50:54.7586109Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:50:54.7587963Z GITHUB_PAT: *** 2021-05-16T01:50:54.7588371Z COVERALLS_TOKEN: 2021-05-16T01:50:54.7588867Z continue-on-error: true 2021-05-16T01:50:54.7589339Z VDIFFR_RUN_TESTS: 2021-05-16T01:50:54.7589832Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:50:54.7590287Z TZ: UTC 2021-05-16T01:50:54.7590664Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:50:54.7591086Z NOT_CRAN: true 2021-05-16T01:50:54.7591454Z ##[endgroup] 2021-05-16T01:50:55.0311809Z ✔ Loading tic stage configuration from tic.R 2021-05-16T01:50:55.1598924Z Running script: step_rcmdcheck(warnings_are_errors = NULL, notes_are_errors = NULL, 2021-05-16T01:50:55.1599928Z args = args, build_args = NULL, error_on = error_on, repos = repo_default(), 2021-05-16T01:50:55.1600649Z timeout = Inf, check_dir = "check") 2021-05-16T01:50:55.2181072Z ── R CMD build ───────────────────────────────────────────────────────────────── 2021-05-16T01:50:55.4418983Z * checking for file ‘.../DESCRIPTION’ ... OK 2021-05-16T01:50:55.4551167Z * preparing ‘bftools’: 2021-05-16T01:50:55.4660642Z * checking DESCRIPTION meta-information ... OK 2021-05-16T01:50:55.4661663Z * running ‘cleanup’ 2021-05-16T01:50:55.5537928Z * installing the package to build vignettes 2021-05-16T01:51:13.3013408Z * creating vignettes ... OK 2021-05-16T01:51:13.3127035Z * running ‘cleanup’ 2021-05-16T01:51:13.3541671Z * checking for LF line-endings in source and make files and shell scripts 2021-05-16T01:51:13.3548706Z * checking for empty or unneeded directories 2021-05-16T01:51:13.3563100Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-16T01:51:13.3658107Z * building ‘bftools_0.2.3.3.tar.gz’ 2021-05-16T01:51:13.3787949Z 2021-05-16T01:51:13.5024520Z ── R CMD check ───────────────────────────────────────────────────────────────── 2021-05-16T01:51:13.7397751Z * using log directory ‘/home/runner/work/bftools/bftools/check/bftools.Rcheck’ 2021-05-16T01:51:13.7399055Z * using R Under development (unstable) (2021-05-14 r80296) 2021-05-16T01:51:13.7400059Z * using platform: x86_64-pc-linux-gnu (64-bit) 2021-05-16T01:51:13.7400888Z * using session charset: UTF-8 2021-05-16T01:51:13.7644663Z * using option ‘--as-cran’ 2021-05-16T01:51:13.7736103Z * checking for file ‘bftools/DESCRIPTION’ ... OK 2021-05-16T01:51:13.7744927Z * checking extension type ... Package 2021-05-16T01:51:13.7745991Z * this is package ‘bftools’ version ‘0.2.3.3’ 2021-05-16T01:51:13.7746731Z * package encoding: UTF-8 2021-05-16T01:51:13.7774473Z * checking package namespace information ... OK 2021-05-16T01:51:29.4412600Z * checking package dependencies ... OK 2021-05-16T01:51:29.4427367Z * checking if this is a source package ... OK 2021-05-16T01:51:29.4429140Z * checking if there is a namespace ... OK 2021-05-16T01:51:29.6275811Z * checking for executable files ... OK 2021-05-16T01:51:29.6277804Z * checking for hidden files and directories ... OK 2021-05-16T01:51:29.6280384Z * checking for portable file names ... OK 2021-05-16T01:51:29.6281833Z * checking for sufficient/correct file permissions ... OK 2021-05-16T01:51:29.6302227Z * checking serialization versions ... OK 2021-05-16T01:51:48.8795610Z * checking whether package ‘bftools’ can be installed ... OK 2021-05-16T01:51:48.8936263Z * checking installed package size ... NOTE 2021-05-16T01:51:48.8937300Z installed size is 37.3Mb 2021-05-16T01:51:48.8954141Z sub-directories of 1Mb or more: 2021-05-16T01:51:48.8961890Z bftools 37.1Mb 2021-05-16T01:51:48.9670696Z * checking package directory ... OK 2021-05-16T01:51:48.9683678Z * checking for future file timestamps ... OK 2021-05-16T01:51:48.9686193Z * checking ‘build’ directory ... OK 2021-05-16T01:51:49.1310456Z * checking DESCRIPTION meta-information ... OK 2021-05-16T01:51:49.1340524Z * checking top-level files ... NOTE 2021-05-16T01:51:49.1341786Z ‘configure’: /bin/bash is not portable 2021-05-16T01:51:49.2334791Z * checking for left-over files ... OK 2021-05-16T01:51:49.3955523Z * checking index information ... OK 2021-05-16T01:51:49.5669457Z * checking package subdirectories ... OK 2021-05-16T01:51:49.6118370Z * checking R files for non-ASCII characters ... OK 2021-05-16T01:51:49.6603070Z * checking R files for syntax errors ... OK 2021-05-16T01:51:50.1606996Z * checking whether the package can be loaded ... OK 2021-05-16T01:51:50.5939753Z * checking whether the package can be loaded with stated dependencies ... OK 2021-05-16T01:51:51.0314518Z * checking whether the package can be unloaded cleanly ... OK 2021-05-16T01:51:51.4713970Z * checking whether the namespace can be loaded with stated dependencies ... OK 2021-05-16T01:51:51.9488069Z * checking whether the namespace can be unloaded cleanly ... OK 2021-05-16T01:51:52.5018188Z * checking loading without being on the library search path ... OK 2021-05-16T01:51:52.9715260Z * checking dependencies in R code ... OK 2021-05-16T01:51:53.9138574Z * checking S3 generic/method consistency ... OK 2021-05-16T01:51:54.3700638Z * checking replacement functions ... OK 2021-05-16T01:51:54.8342572Z * checking foreign function calls ... OK 2021-05-16T01:51:58.4755206Z * checking R code for possible problems ... OK 2021-05-16T01:51:58.6678997Z * checking Rd files ... OK 2021-05-16T01:51:58.7157438Z * checking Rd metadata ... OK 2021-05-16T01:51:58.7783616Z * checking Rd line widths ... OK 2021-05-16T01:51:58.8735909Z * checking Rd cross-references ... OK 2021-05-16T01:51:59.3403721Z * checking for missing documentation entries ... OK 2021-05-16T01:52:00.7538073Z * checking for code/documentation mismatches ... OK 2021-05-16T01:52:01.8528307Z * checking Rd \usage sections ... OK 2021-05-16T01:52:01.9272175Z * checking Rd contents ... OK 2021-05-16T01:52:02.0197304Z * checking for unstated dependencies in examples ... OK 2021-05-16T01:52:02.0198681Z * checking line endings in shell scripts ... OK 2021-05-16T01:52:02.0241357Z * checking installed files from ‘inst/doc’ ... OK 2021-05-16T01:52:02.0275397Z * checking files in ‘vignettes’ ... OK 2021-05-16T01:52:05.8140544Z * checking examples ... OK 2021-05-16T01:52:05.8876261Z * checking for unstated dependencies in ‘tests’ ... OK 2021-05-16T01:52:06.0426730Z * checking tests ... 2021-05-16T01:52:24.2744347Z Running ‘testthat.R’ [23s/18s] 2021-05-16T01:52:24.2791191Z OK 2021-05-16T01:52:24.4499302Z * checking for unstated dependencies in vignettes ... OK 2021-05-16T01:52:24.4630054Z * checking package vignettes in ‘inst/doc’ ... NOTE 2021-05-16T01:52:24.4631927Z Package vignette with placeholder title ‘Vignette Title’: 2021-05-16T01:52:24.4633308Z ‘bad-vignette.Rmd’ 2021-05-16T01:52:25.2281075Z * checking re-building of vignette outputs ... OK 2021-05-16T01:52:27.1673214Z * checking PDF version of manual ... OK 2021-05-16T01:52:27.1675861Z * checking for non-standard things in the check directory ... OK 2021-05-16T01:52:27.1676891Z * checking for detritus in the temp directory ... OK 2021-05-16T01:52:27.1677573Z * DONE 2021-05-16T01:52:27.1677972Z 2021-05-16T01:52:27.1678498Z Status: 3 NOTEs 2021-05-16T01:52:27.1679028Z See 2021-05-16T01:52:27.1680143Z ‘/home/runner/work/bftools/bftools/check/bftools.Rcheck/00check.log’ 2021-05-16T01:52:27.1681225Z for details. 2021-05-16T01:52:27.1681646Z 2021-05-16T01:52:27.1682019Z 2021-05-16T01:52:27.2478163Z ── R CMD check results ──────────────────────────────────── bftools 0.2.3.3 ──── 2021-05-16T01:52:27.2491505Z Duration: 1m 13.9s 2021-05-16T01:52:27.2491992Z 2021-05-16T01:52:27.2509175Z ❯ checking installed package size ... NOTE 2021-05-16T01:52:27.2509892Z installed size is 37.3Mb 2021-05-16T01:52:27.2510892Z sub-directories of 1Mb or more: 2021-05-16T01:52:27.2511793Z bftools 37.1Mb 2021-05-16T01:52:27.2512285Z 2021-05-16T01:52:27.2519500Z ❯ checking top-level files ... NOTE 2021-05-16T01:52:27.2520605Z ‘configure’: /bin/bash is not portable 2021-05-16T01:52:27.2521177Z 2021-05-16T01:52:27.2526519Z ❯ checking package vignettes in ‘inst/doc’ ... NOTE 2021-05-16T01:52:27.2527792Z Package vignette with placeholder title ‘Vignette Title’: 2021-05-16T01:52:27.2528683Z ‘bad-vignette.Rmd’ 2021-05-16T01:52:27.2529143Z 2021-05-16T01:52:27.2534411Z 0 errors ✔ | 0 warnings ✔ | 3 notes ✖ 2021-05-16T01:52:27.2598621Z total 35620 2021-05-16T01:52:27.2600135Z drwxr-xr-x 6 runner docker 4096 May 16 01:52 bftools.Rcheck 2021-05-16T01:52:27.2602119Z -rw-r--r-- 1 runner docker 21916 May 16 01:51 bftools_0.2.3.3.tar.gz 2021-05-16T01:52:27.2603990Z -rw-r--r-- 1 runner docker 36444363 May 16 01:51 bftools_0.2.3.3_R_x86_64-pc-linux-gnu.tar.gz 2021-05-16T01:52:27.2636444Z ##[group]Run find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-05-16T01:52:27.2637479Z find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-05-16T01:52:27.2678685Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-05-16T01:52:27.2679199Z env: 2021-05-16T01:52:27.2679659Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:52:27.2680129Z TIC_DEPLOY_KEY: 2021-05-16T01:52:27.2680997Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:52:27.2682750Z GITHUB_PAT: *** 2021-05-16T01:52:27.2683182Z COVERALLS_TOKEN: 2021-05-16T01:52:27.2683669Z continue-on-error: true 2021-05-16T01:52:27.2684159Z VDIFFR_RUN_TESTS: 2021-05-16T01:52:27.2684656Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:52:27.2685097Z TZ: UTC 2021-05-16T01:52:27.2685496Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:52:27.2685906Z NOT_CRAN: true 2021-05-16T01:52:27.2686293Z ##[endgroup] 2021-05-16T01:52:27.2784016Z 2021-05-16T01:52:27.2785977Z R Under development (unstable) (2021-05-14 r80296) -- "Unsuffered Consequences" 2021-05-16T01:52:27.2787486Z Copyright (C) 2021 The R Foundation for Statistical Computing 2021-05-16T01:52:27.2789250Z Platform: x86_64-pc-linux-gnu (64-bit) 2021-05-16T01:52:27.2790242Z 2021-05-16T01:52:27.2791182Z R is free software and comes with ABSOLUTELY NO WARRANTY. 2021-05-16T01:52:27.2792217Z You are welcome to redistribute it under certain conditions. 2021-05-16T01:52:27.2793366Z Type 'license()' or 'licence()' for distribution details. 2021-05-16T01:52:27.2794937Z 2021-05-16T01:52:27.2795597Z R is a collaborative project with many contributors. 2021-05-16T01:52:27.2796633Z Type 'contributors()' for more information and 2021-05-16T01:52:27.2797666Z 'citation()' on how to cite R or R packages in publications. 2021-05-16T01:52:27.2798120Z 2021-05-16T01:52:27.2798930Z Type 'demo()' for some demos, 'help()' for on-line help, or 2021-05-16T01:52:27.2799922Z 'help.start()' for an HTML browser interface to help. 2021-05-16T01:52:27.2800687Z Type 'q()' to quit R. 2021-05-16T01:52:27.2800984Z 2021-05-16T01:52:27.2801410Z > library(testthat) 2021-05-16T01:52:27.2801907Z > library(bftools) 2021-05-16T01:52:27.2802296Z > 2021-05-16T01:52:27.2802743Z > test_check("bftools") 2021-05-16T01:52:27.2803456Z /tmp/RtmpVsVcFR/RLIBS_da9b45d84c97/png/img/Rlogo.png 2021-05-16T01:52:27.2804479Z APNGReader initializing /tmp/RtmpVsVcFR/RLIBS_da9b45d84c97/png/img/Rlogo.png 2021-05-16T01:52:27.2806037Z [Animated PNG] -> /tmp/RtmpVsVcFR/working_dir/RtmpABsBlt/filedca71756a249.tiff [Tagged Image File Format] 2021-05-16T01:52:27.2807134Z Converted 1/1 planes (100%) 2021-05-16T01:52:27.2807603Z [done] 2021-05-16T01:52:27.2808205Z 1.14s elapsed (16.0+483.0ms per plane, 636ms overhead) 2021-05-16T01:52:27.2809487Z trying URL 'https://ndownloader.figshare.com/files/16618418' 2021-05-16T01:52:27.2810848Z Content type 'application/octet-stream' length 861536 bytes (841 KB) 2021-05-16T01:52:27.2811565Z ================================================== 2021-05-16T01:52:27.2812038Z downloaded 841 KB 2021-05-16T01:52:27.2812345Z 2021-05-16T01:52:27.2812857Z To test read a file in any format, run: 2021-05-16T01:52:27.2813822Z showinf file [-nopix] [-nocore] [-nometa] [-thumbs] [-minmax] 2021-05-16T01:52:27.2814856Z [-merge] [-nogroup] [-stitch] [-separate] [-expand] [-omexml] 2021-05-16T01:52:27.2815918Z [-normalize] [-fast] [-debug] [-range start end] [-series num] 2021-05-16T01:52:27.2817002Z [-resolution num] [-swap inputOrder] [-shuffle outputOrder] 2021-05-16T01:52:27.2818099Z [-map id] [-preload] [-crop x,y,w,h] [-autoscale] [-novalid] 2021-05-16T01:52:27.2819184Z [-omexml-only] [-no-sas] [-no-upgrade] [-noflat] [-format Format] 2021-05-16T01:52:27.2820182Z [-cache] [-cache-dir dir] [-option key value] 2021-05-16T01:52:27.2820592Z 2021-05-16T01:52:27.2821335Z -version: print the library version and exit 2021-05-16T01:52:27.2822005Z file: the image file to read 2021-05-16T01:52:27.2822945Z -nopix: read metadata only, not pixels 2021-05-16T01:52:27.2823804Z -nocore: do not output core metadata 2021-05-16T01:52:27.2824792Z -nometa: do not parse format-specific metadata table 2021-05-16T01:52:27.2825745Z -nofilter: do not filter metadata fields 2021-05-16T01:52:27.2826706Z -thumbs: read thumbnails instead of normal pixels 2021-05-16T01:52:27.2827586Z -minmax: compute min/max statistics 2021-05-16T01:52:27.2828532Z -merge: combine separate channels into RGB image 2021-05-16T01:52:27.2829631Z -nogroup: force multi-file datasets to be read as individual files 2021-05-16T01:52:27.2830637Z -stitch: stitch files with similar names 2021-05-16T01:52:27.2831588Z -separate: split RGB image into separate channels 2021-05-16T01:52:27.2832487Z -expand: expand indexed color to RGB 2021-05-16T01:52:27.2833341Z -omexml: populate OME-XML metadata 2021-05-16T01:52:27.2834595Z -normalize: normalize floating point images (*) 2021-05-16T01:52:27.2835515Z -fast: paint RGB images as quickly as possible (*) 2021-05-16T01:52:27.2836303Z -debug: turn on debugging output 2021-05-16T01:52:27.2837176Z -range: specify range of planes to read (inclusive) 2021-05-16T01:52:27.2838064Z -series: specify which image series to read 2021-05-16T01:52:27.2839127Z -noflat: do not flatten subresolutions 2021-05-16T01:52:27.2840172Z -resolution: used in combination with -noflat to specify which 2021-05-16T01:52:27.2841132Z subresolution to read (for images with subresolutions) 2021-05-16T01:52:27.2842215Z -swap: override the default input dimension order 2021-05-16T01:52:27.2843240Z -shuffle: override the default output dimension order 2021-05-16T01:52:27.2844330Z -map: specify file on disk to which name should be mapped 2021-05-16T01:52:27.2845414Z -preload: pre-read entire file into a buffer; significantly 2021-05-16T01:52:27.2846317Z reduces the time required to read the images, but 2021-05-16T01:52:27.2847006Z requires more memory 2021-05-16T01:52:27.2847962Z -crop: crop images before displaying; argument is 'x,y,w,h' 2021-05-16T01:52:27.2849091Z -autoscale: automatically adjust brightness and contrast (*) 2021-05-16T01:52:27.2850119Z -novalid: do not perform validation of OME-XML 2021-05-16T01:52:27.2851090Z -omexml-only: only output the generated OME-XML 2021-05-16T01:52:27.2852225Z -no-sas: do not output OME-XML StructuredAnnotation elements 2021-05-16T01:52:27.2853306Z -no-upgrade: do not perform the upgrade check 2021-05-16T01:52:27.2854558Z -format: read file with a particular reader (e.g., ZeissZVI) 2021-05-16T01:52:27.2855447Z -cache: cache the initialized reader 2021-05-16T01:52:27.2856407Z -cache-dir: use the specified directory to store the cached 2021-05-16T01:52:27.2857284Z initialized reader. If unspecified, the cached reader 2021-05-16T01:52:27.2858140Z will be stored under the same folder as the image file 2021-05-16T01:52:27.2859166Z -option: add the specified key/value pair to the reader's options list 2021-05-16T01:52:27.2859640Z 2021-05-16T01:52:27.2860118Z * = may result in loss of precision 2021-05-16T01:52:27.2860456Z 2021-05-16T01:52:27.2861099Z /tmp/RtmpVsVcFR/working_dir/RtmpABsBlt/pJP28mCherry.czi 2021-05-16T01:52:27.2862203Z ZeissCZIReader initializing /tmp/RtmpVsVcFR/working_dir/RtmpABsBlt/pJP28mCherry.czi 2021-05-16T01:52:27.2863714Z [Zeiss CZI] -> /tmp/RtmpVsVcFR/working_dir/RtmpABsBlt/filedca772e416c7.tiff [Tagged Image File Format] 2021-05-16T01:52:27.2864578Z Converted 3/3 planes (100%) 2021-05-16T01:52:27.2864994Z [done] 2021-05-16T01:52:27.2865585Z 1.195s elapsed (6.3333335+65.666664ms per plane, 973ms overhead) 2021-05-16T01:52:27.2866399Z /tmp/RtmpVsVcFR/working_dir/RtmpABsBlt/pJP28mCherry.czi 2021-05-16T01:52:27.2867496Z ZeissCZIReader initializing /tmp/RtmpVsVcFR/working_dir/RtmpABsBlt/pJP28mCherry.czi 2021-05-16T01:52:27.2869074Z [Zeiss CZI] -> /tmp/RtmpVsVcFR/working_dir/RtmpABsBlt/filedca740a16925.tiff [Tagged Image File Format] 2021-05-16T01:52:27.2869917Z Converted 3/3 planes (100%) 2021-05-16T01:52:27.2870346Z [done] 2021-05-16T01:52:27.2870931Z 1.139s elapsed (15.666667+22.666666ms per plane, 1019ms overhead) 2021-05-16T01:52:27.2871557Z [ FAIL 0 | WARN 0 | SKIP 0 | PASS 20 ] 2021-05-16T01:52:27.2871959Z > 2021-05-16T01:52:27.2872326Z > proc.time() 2021-05-16T01:52:27.2872807Z user system elapsed 2021-05-16T01:52:27.2873240Z 21.266 1.224 18.196 2021-05-16T01:52:27.2905383Z ##[group]Run Rscript -e "tic::before_deploy()" 2021-05-16T01:52:27.2906041Z Rscript -e "tic::before_deploy()" 2021-05-16T01:52:27.2949856Z shell: /usr/bin/bash -e {0} 2021-05-16T01:52:27.2950339Z env: 2021-05-16T01:52:27.2950740Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:52:27.2951165Z TIC_DEPLOY_KEY: 2021-05-16T01:52:27.2951907Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:52:27.2953112Z GITHUB_PAT: *** 2021-05-16T01:52:27.2953460Z COVERALLS_TOKEN: 2021-05-16T01:52:27.2954022Z continue-on-error: true 2021-05-16T01:52:27.2954432Z VDIFFR_RUN_TESTS: 2021-05-16T01:52:27.2954865Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:52:27.2955247Z TZ: UTC 2021-05-16T01:52:27.2955596Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:52:27.2955967Z NOT_CRAN: true 2021-05-16T01:52:27.2956290Z ##[endgroup] 2021-05-16T01:52:27.5525001Z ✔ Loading tic stage configuration from tic.R 2021-05-16T01:52:27.6747617Z ##[group]Run actions/upload-release-asset@v1.0.1 2021-05-16T01:52:27.6748190Z with: 2021-05-16T01:52:27.6749077Z upload_url: https://uploads.github.com/repos/neuroconductor/bftools/releases/43007804/assets{?name,label} 2021-05-16T01:52:27.6750157Z asset_path: check/bftools_0.2.3.3_R_x86_64-pc-linux-gnu.tar.gz 2021-05-16T01:52:27.6750869Z asset_name: bftools_0.2.3.3_R_x86_64-pc-linux-gnu_R4.1.tar.gz 2021-05-16T01:52:27.6751536Z asset_content_type: application/octet-stream 2021-05-16T01:52:27.6752097Z env: 2021-05-16T01:52:27.6752474Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:52:27.6752893Z TIC_DEPLOY_KEY: 2021-05-16T01:52:27.6754543Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:52:27.6756013Z GITHUB_PAT: *** 2021-05-16T01:52:27.6756379Z COVERALLS_TOKEN: 2021-05-16T01:52:27.6756839Z continue-on-error: true 2021-05-16T01:52:27.6757276Z VDIFFR_RUN_TESTS: 2021-05-16T01:52:27.6757734Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:52:27.6758121Z TZ: UTC 2021-05-16T01:52:27.6758471Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:52:27.6758952Z NOT_CRAN: true 2021-05-16T01:52:27.6759783Z GITHUB_TOKEN: *** 2021-05-16T01:52:27.6760138Z ##[endgroup] 2021-05-16T01:52:29.0086007Z ##[group]Run Rscript -e "tic::deploy()" 2021-05-16T01:52:29.0086618Z Rscript -e "tic::deploy()" 2021-05-16T01:52:29.0133193Z shell: /usr/bin/bash -e {0} 2021-05-16T01:52:29.0133600Z env: 2021-05-16T01:52:29.0134043Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:52:29.0134523Z TIC_DEPLOY_KEY: 2021-05-16T01:52:29.0135382Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:52:29.0137006Z GITHUB_PAT: *** 2021-05-16T01:52:29.0137409Z COVERALLS_TOKEN: 2021-05-16T01:52:29.0137901Z continue-on-error: true 2021-05-16T01:52:29.0138371Z VDIFFR_RUN_TESTS: 2021-05-16T01:52:29.0138871Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:52:29.0139332Z TZ: UTC 2021-05-16T01:52:29.0139717Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:52:29.0140139Z NOT_CRAN: true 2021-05-16T01:52:29.0140525Z ##[endgroup] 2021-05-16T01:52:29.2838435Z ✔ Loading tic stage configuration from tic.R 2021-05-16T01:52:29.4047238Z ##[group]Run Rscript -e "tic::after_deploy()" 2021-05-16T01:52:29.4047854Z Rscript -e "tic::after_deploy()" 2021-05-16T01:52:29.4092266Z shell: /usr/bin/bash -e {0} 2021-05-16T01:52:29.4092580Z env: 2021-05-16T01:52:29.4092921Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-16T01:52:29.4093284Z TIC_DEPLOY_KEY: 2021-05-16T01:52:29.4093931Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-16T01:52:29.4095382Z GITHUB_PAT: *** 2021-05-16T01:52:29.4095914Z COVERALLS_TOKEN: 2021-05-16T01:52:29.4096351Z continue-on-error: true 2021-05-16T01:52:29.4096760Z VDIFFR_RUN_TESTS: 2021-05-16T01:52:29.4097196Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-16T01:52:29.4097791Z TZ: UTC 2021-05-16T01:52:29.4098172Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-16T01:52:29.4098589Z NOT_CRAN: true 2021-05-16T01:52:29.4098962Z ##[endgroup] 2021-05-16T01:52:29.6681694Z ✔ Loading tic stage configuration from tic.R 2021-05-16T01:52:29.9574387Z Post job cleanup. 2021-05-16T01:52:30.0032628Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-05-16T01:52:30.0124514Z Post job cleanup. 2021-05-16T01:52:30.1166207Z [command]/usr/bin/git version 2021-05-16T01:52:30.1225511Z git version 2.31.1 2021-05-16T01:52:30.1269343Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-05-16T01:52:30.1315928Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-05-16T01:52:30.1568287Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-05-16T01:52:30.1598765Z http.https://github.com/.extraheader 2021-05-16T01:52:30.1609751Z [command]/usr/bin/git config --local --unset-all http.https://github.com/.extraheader 2021-05-16T01:52:30.1655615Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-05-16T01:52:30.1989801Z Cleaning up orphan processes