Using the Penn115 atlas

John Muschelli

2019-07-16

Read in the Penn115 Template

The Penn immages include a brain mask and an image. We will read them in and display them:

library(penn115)
#> Registered S3 method overwritten by 'R.oo':
#>   method        from       
#>   throw.default R.methodsS3
library(neurobase)
#> Loading required package: oro.nifti
#> oro.nifti 0.10.1

img = penn115::penn115_image()
mask = penn115::penn115_brain_mask()
neurobase::ortho2(img, mask, col.y = "#FF000080")

brain = penn115::penn115_brain()
neurobase::ortho2(brain)