labelClusters.Rd
This will give a unique ID to each connected component 1 through N of size > minClusterSize
labelClusters(imagein, minClusterSize = 50, minThresh = 1e-06, maxThresh = 1, fullyConnected = FALSE)
imagein | input antsImage e.g. a statistical map |
---|---|
minClusterSize | throw away clusters smaller than this value |
minThresh | threshold to a statistical map |
maxThresh | threshold to a statistical map |
fullyConnected | boolean sets neighborhood connectivity pattern |
labeled cluster image is output
img<-antsImageRead( getANTsRData("r16") ) timgFully = labelClusters( img, 10, 128, 150, TRUE ) timgFace = labelClusters( img, 10, 128, 150, FALSE )# NOT RUN { plot(img, timgFace ) plot(img, timgFully ) # }