SRI24 Images

SRI24 Images

sri24_image_df()

sri24_images()

Value

A data.frame for sri24_image_df and a character vector for sri24_images

Examples

library(neurobase)
#> Loading required package: oro.nifti
#> oro.nifti 0.11.0
sri24_image_df()
#>                                                                           file
#> erly_unstrip /home/runner/work/_temp/Library/sri24/extdata/erly_unstrip.nii.gz
#> erly                 /home/runner/work/_temp/Library/sri24/extdata/erly.nii.gz
#> fa                     /home/runner/work/_temp/Library/sri24/extdata/fa.nii.gz
#> l1                     /home/runner/work/_temp/Library/sri24/extdata/l1.nii.gz
#> late_unstrip /home/runner/work/_temp/Library/sri24/extdata/late_unstrip.nii.gz
#> late                 /home/runner/work/_temp/Library/sri24/extdata/late.nii.gz
#> lpba40             /home/runner/work/_temp/Library/sri24/extdata/lpba40.nii.gz
#> lt                     /home/runner/work/_temp/Library/sri24/extdata/lt.nii.gz
#> md                     /home/runner/work/_temp/Library/sri24/extdata/md.nii.gz
#> pbmap_CSF       /home/runner/work/_temp/Library/sri24/extdata/pbmap_CSF.nii.gz
#> pbmap_GM         /home/runner/work/_temp/Library/sri24/extdata/pbmap_GM.nii.gz
#> pbmap_WM         /home/runner/work/_temp/Library/sri24/extdata/pbmap_WM.nii.gz
#> spgr_unstrip /home/runner/work/_temp/Library/sri24/extdata/spgr_unstrip.nii.gz
#> spgr                 /home/runner/work/_temp/Library/sri24/extdata/spgr.nii.gz
#> suptent           /home/runner/work/_temp/Library/sri24/extdata/suptent.nii.gz
#> tissues           /home/runner/work/_temp/Library/sri24/extdata/tissues.nii.gz
#> tzo116plus     /home/runner/work/_temp/Library/sri24/extdata/tzo116plus.nii.gz
#>                      stub   type
#> erly_unstrip erly_unstrip   anat
#> erly                 erly   anat
#> fa                     fa    dti
#> l1                     l1    dti
#> late_unstrip late_unstrip   anat
#> late                 late   anat
#> lpba40             lpba40  label
#> lt                     lt    dti
#> md                     md    dti
#> pbmap_CSF       pbmap_CSF tissue
#> pbmap_GM         pbmap_GM tissue
#> pbmap_WM         pbmap_WM tissue
#> spgr_unstrip spgr_unstrip   anat
#> spgr                 spgr   anat
#> suptent           suptent  label
#> tissues           tissues tissue
#> tzo116plus     tzo116plus  label
imgs = sri24_images()
imgs
#>                                                        erly_unstrip 
#> "/home/runner/work/_temp/Library/sri24/extdata/erly_unstrip.nii.gz" 
#>                                                                erly 
#>         "/home/runner/work/_temp/Library/sri24/extdata/erly.nii.gz" 
#>                                                                  fa 
#>           "/home/runner/work/_temp/Library/sri24/extdata/fa.nii.gz" 
#>                                                                  l1 
#>           "/home/runner/work/_temp/Library/sri24/extdata/l1.nii.gz" 
#>                                                        late_unstrip 
#> "/home/runner/work/_temp/Library/sri24/extdata/late_unstrip.nii.gz" 
#>                                                                late 
#>         "/home/runner/work/_temp/Library/sri24/extdata/late.nii.gz" 
#>                                                              lpba40 
#>       "/home/runner/work/_temp/Library/sri24/extdata/lpba40.nii.gz" 
#>                                                                  lt 
#>           "/home/runner/work/_temp/Library/sri24/extdata/lt.nii.gz" 
#>                                                                  md 
#>           "/home/runner/work/_temp/Library/sri24/extdata/md.nii.gz" 
#>                                                           pbmap_CSF 
#>    "/home/runner/work/_temp/Library/sri24/extdata/pbmap_CSF.nii.gz" 
#>                                                            pbmap_GM 
#>     "/home/runner/work/_temp/Library/sri24/extdata/pbmap_GM.nii.gz" 
#>                                                            pbmap_WM 
#>     "/home/runner/work/_temp/Library/sri24/extdata/pbmap_WM.nii.gz" 
#>                                                        spgr_unstrip 
#> "/home/runner/work/_temp/Library/sri24/extdata/spgr_unstrip.nii.gz" 
#>                                                                spgr 
#>         "/home/runner/work/_temp/Library/sri24/extdata/spgr.nii.gz" 
#>                                                             suptent 
#>      "/home/runner/work/_temp/Library/sri24/extdata/suptent.nii.gz" 
#>                                                             tissues 
#>      "/home/runner/work/_temp/Library/sri24/extdata/tissues.nii.gz" 
#>                                                          tzo116plus 
#>   "/home/runner/work/_temp/Library/sri24/extdata/tzo116plus.nii.gz" 
imgs["erly"]
#>                                                        erly 
#> "/home/runner/work/_temp/Library/sri24/extdata/erly.nii.gz" 
img = readnii(imgs["erly"])
ortho2(img)