Wrapper for Computing FA/MD and other Standard Markers

Performs the Camino fa and md functions to compute mean diffusivity (MD) and fractional anisotropy (FA) markers

camino_compute(cmd = c("fa", "md", "trd"), infile, inputmodel = c("dt",
  "twotensor", "threetensor", "multitensor"), outfile = NULL,
  inputdatatype = NULL, outputdatatype = c("double", "float", "char",
  "short", "int", "long"), verbose = TRUE)

Arguments

cmd

Command to perform
infile

Output from camino_modelfit
inputmodel

model used for tensors
outfile

Output filename for FA map
inputdatatype

specify input data type, options are float, char, short, int, long, double
outputdatatype

output data type
verbose

print diagnostic messages