The ANALYZE class for medical imaging data.

# S4 method for anlz
show(object)

Arguments

object

An object of class anlz.

Objects from the Class

Objects can be created by calls of the form new("anlz", data, dim, dimnames, ...) or by calling the anlz function.

Slots

.Data:

Object of class "array" contains the imaging data

sizeof_hdr:

Object of class "numeric" contains the size of the header (= 348)

data_type:

Object of class "character"

db_name:

Object of class "character"

extents:

Object of class "numeric"

session_error:

Object of class "numeric"

regular:

Object of class "character"

hkey_un0:

Object of class "character"

dim_:

Object of class "vector" contains the dimensions of the imaging data

vox_units:

Object of class "character"

cal_units:

Object of class "character"

unused1:

Object of class "numeric"

datatype:

Object of class "numeric"

bitpix:

Object of class "numeric" contains the number of bits per voxel (pixel)

dim_un0:

Object of class "numeric"

pixdim:

Object of class "vector" contains the real-world dimensions of the imaging data

vox_offset:

Object of class "numeric"

funused1:

Object of class "numeric"

funused2:

Object of class "numeric"

funused3:

Object of class "numeric"

cal_max:

Object of class "numeric" contains the maximum display intensity

cal_min:

Object of class "numeric" contains the minimum display intensity

compressed:

Object of class "numeric"

verified:

Object of class "numeric"

glmax:

Object of class "numeric"

glmin:

Object of class "numeric"

descrip:

Object of class "character"

aux_file:

Object of class "character"

orient:

Object of class "character"

origin:

Object of class "numeric"

generated:

Object of class "character"

scannum:

Object of class "character"

patient_id:

Object of class "character"

exp_date:

Object of class "character"

exp_time:

Object of class "character"

hist_un0:

Object of class "character"

views:

Object of class "numeric"

vols_added:

Object of class "numeric"

start_field:

Object of class "numeric"

field_skip:

Object of class "numeric"

omax:

Object of class "numeric"

omin:

Object of class "numeric"

smax:

Object of class "numeric"

smin:

Object of class "numeric"

Extends

Class "array", from data part.
Class "matrix", by class “array”, distance 2, with explicit test and coerce.
Class "structure", by class “array”, distance 2.
Class "vector", by class “array”, distance 3, with explicit coerce.
Class "vector", by class “array”, distance 5, with explicit test and coerce.

Methods

image

signature(x = "anlz"): displays the image(s).

show

signature(object = "anlz"): prints out a summary of the imaging data.

References

ANALYZE 7.5
http://eeg.sourceforge.net/ANALYZE75.pdf

See also

Author

Brandon Whitcher bwhitcher@gmail.com

Examples


showClass("anlz")
#> Class "anlz" [package "oro.nifti"]
#> 
#> Slots:
#>                                                                             
#> Name:          .Data    sizeof_hdr     data_type       db_name       extents
#> Class:         array       numeric     character     character       numeric
#>                                                                             
#> Name:  session_error       regular      hkey_un0          dim_     vox_units
#> Class:       numeric     character     character        vector     character
#>                                                                             
#> Name:      cal_units       unused1      datatype        bitpix       dim_un0
#> Class:     character       numeric       numeric       numeric       numeric
#>                                                                             
#> Name:         pixdim    vox_offset      funused1      funused2      funused3
#> Class:        vector       numeric       numeric       numeric       numeric
#>                                                                             
#> Name:        cal_max       cal_min    compressed      verified         glmax
#> Class:       numeric       numeric       numeric       numeric       numeric
#>                                                                             
#> Name:          glmin       descrip      aux_file        orient        origin
#> Class:       numeric     character     character     character       numeric
#>                                                                             
#> Name:      generated       scannum    patient_id      exp_date      exp_time
#> Class:     character     character     character     character     character
#>                                                                             
#> Name:       hist_un0         views    vols_added   start_field    field_skip
#> Class:     character       numeric       numeric       numeric       numeric
#>                                                               
#> Name:           omax          omin          smax          smin
#> Class:       numeric       numeric       numeric       numeric
#> 
#> Extends: 
#> Class "array", from data part
#> Class "structure", by class "array", distance 2
#> Class "vector", by class "array", distance 3, with explicit coerce