Radiomic Calculation on Lung CTs

Source: R/radiomics_lung.R

Calculate individual radiomic features on the whole 3D lung, left and right lungs separately

radiomics_lung(
  img,
  mask,
  sides = c("right", "left"),
  featuresFirst = c("mean", "sd", "skew", "kurtosis", "min", "q1", "median", "q3",
    "max", "energy", "rms", "uniformity", "entropy"),
  featuresSpatial = c("mi", "gc", "fd")
)

Arguments

img

CT scan in ANTs image file format
mask

Mask of CT scan in ANTs image file format
sides

Choose to calculate radiomic features on the right and/or left lungs. Note: Right lung = 1, left lung = 2, non-lung = 0
featuresFirst

First level radiomic features to calculate
featuresSpatial

Spatial radiomic features to calculate

Value

Values from selected features for both left and right lungs