Determine Freesurfer output type

Source: R/fs_setup.R

Finds the FSF_OUTPUT_FORMAT from system environment or getOption("fs.outputtype") for output type (nii.gz, nii, ANALYZE,etc)

get_fs_output()

Value

FSF_OUTPUT_FORMAT, such as nii.gz If none found, uses nii.gz as default

Examples

get_fs_output()
#> [1] "nii.gz"