Visualize fMRI p-value maps

Visualize objects created by function fmri.pvalue

# S3 method for fmripvalue
plot(x, template = NULL, mask = NULL,
      view = c("axial", "coronal", "sagittal", "orthographic"),
      slices = NULL, ncol = 1, nrow = 1, center = NULL, ...)

Arguments

x	object of class 'fmripvalue'
template	Anatomical image of same origin and direction as pvalue map in x$pvalue.
mask	optional brain mask
view	Either 'orthographic' or one of 'axial', 'coronal' or 'sagittal'
slices	If view != "orthographic" vector of slice numbers to use. If not provided the ncol*nrow slices with strongest signals are selected
ncol	If view != "orthographic" number of slices per row
nrow	If view != "orthographic" number of rows in display.
center	If view == "orthographic" center of orthographic view. If not provided the center is chosen to provide maximal information.
...	additional parameters (not evaluated)

Value

list with components

comp1

slices, numbers refer to spm

comp2

center, numbers refer to spm

Author

Joerg Polzehl polzehl@wias-berlin.de

See also

fmri.pvalue, ~~~