Get Scaled Neighborhood of Voxels from an Image

Source: R/scaled_neighborhood.R

This function wraps the neighborhood to provided scaled neighborhood or its ranks

scaled_neighborhood(
  img,
  mask = NULL,
  radius = rep(1, 3),
  method = c("pearson", "spearman"),
  center = TRUE,
  scale = TRUE,
  verbose = TRUE
)

Arguments

img

Object of class nifti, character or antsImage
mask

Binary image of class nifti, antsImage, character. Only neighborhoods inside the mask will be taken
radius

vector of length 3 for number of voxels to go in each direction. Default is 27 neighbors (including voxel at center). Passed to getNeighborhoodInMask.
method

If pearson, scaling done on original data. If spearman, the ranks.
center

Should the data be centered
scale

Should the data be scaled
verbose

print diagnostic messages

Value

List similar to the output of getNeighborhoodInMask